!!omap
- metabolites:
  - !!omap
    - id: __Ecoli_panGEMs__octapb_c
    - name: Octanoate (protein bound)
    - compartment: c
    - charge: 1.0
    - formula: C8H15O
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__octapb_c:1
      - sbo: SBO:0000247
  - !!omap
    - id: cysi__L_e
    - name: L-cystine
    - compartment: e
    - charge: 0.0
    - formula: C6H12N2O4S2
    - annotation: !!omap
      - biggr: cysi__L_e:0
      - chebi:
        - CHEBI:35491
        - CHEBI:16283
      - sbo: SBO:0000247
  - !!omap
    - id: dhap_c
    - name: glycerone phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H5O6P
    - annotation: !!omap
      - biggr: dhap_c:-2
      - chebi:
        - CHEBI:57642
      - sbo: SBO:0000247
  - !!omap
    - id: prbatp_c
    - name: 1-(5-phospho-beta-D-ribosyl)-ATP(6-)
    - compartment: c
    - charge: -6.0
    - formula: C15H19N5O20P4
    - annotation: !!omap
      - biggr: prbatp_c:-6
      - chebi:
        - CHEBI:73183
      - sbo: SBO:0000247
  - !!omap
    - id: 10fthf_c
    - name: (6R)-10-formyltetrahydrofolate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C20H21N7O7
    - annotation: !!omap
      - biggr: 10fthf_c:-2
      - chebi:
        - CHEBI:195366
      - sbo: SBO:0000247
  - !!omap
    - id: btal_c
    - name: butanal
    - compartment: c
    - charge: 0.0
    - formula: C4H8O
    - annotation: !!omap
      - biggr: btal_c:0
      - chebi:
        - CHEBI:15743
      - sbo: SBO:0000247
  - !!omap
    - id: 6pgg_c
    - name: 6-phosphonato-beta-D-glucosyl-(1->4)-D-glucose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C12H21O14P
    - annotation: !!omap
      - biggr: 6pgg_c:-2
      - chebi:
        - CHEBI:58312
      - sbo: SBO:0000247
  - !!omap
    - id: co2_e
    - name: carbon dioxide
    - compartment: e
    - charge: 0.0
    - formula: CO2
    - annotation: !!omap
      - biggr: co2_e:0
      - chebi:
        - CHEBI:16526
      - sbo: SBO:0000247
  - !!omap
    - id: akg_e
    - name: 2-oxoglutarate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C5H4O5
    - annotation: !!omap
      - biggr: akg_e:-2
      - chebi:
        - CHEBI:16810
      - sbo: SBO:0000247
  - !!omap
    - id: gsn_e
    - name: guanosine
    - compartment: e
    - charge: 0.0
    - formula: C10H13N5O5
    - annotation: !!omap
      - biggr: gsn_e:0
      - chebi:
        - CHEBI:16750
      - sbo: SBO:0000247
  - !!omap
    - id: pydx5p_c
    - name: pyridoxal 5'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C8H8NO6P
    - annotation: !!omap
      - biggr: pydx5p_c:-2
      - chebi:
        - CHEBI:597326
      - sbo: SBO:0000247
  - !!omap
    - id: 3dhgulnp_c
    - name: 3-dehydro-L-gulonate 6-phosphate
    - compartment: c
    - charge: -3.0
    - formula: C6H8O10P
    - annotation: !!omap
      - biggr: 3dhgulnp_c:-3
      - chebi:
        - CHEBI:58774
      - sbo: SBO:0000247
  - !!omap
    - id: g3ps_c
    - name: sn-glycero-3-phosphoserine(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: g3ps_c:-1
      - chebi:
        - CHEBI:64765
      - sbo: SBO:0000247
  - !!omap
    - id: adphep_LD_c
    - name: ADP-L-glycero-beta-D-manno-heptose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C17H25N5O16P2
    - annotation: !!omap
      - biggr: adphep_LD_c:-2
      - chebi:
        - CHEBI:61506
      - sbo: SBO:0000247
  - !!omap
    - id: lyx__L_c
    - name: L-lyxopyranose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: lyx__L_c:0
      - chebi:
        - CHEBI:62321
      - sbo: SBO:0000247
  - !!omap
    - id: din_p
    - name: 2'-deoxyinosine
    - compartment: p
    - charge: 0.0
    - formula: C10H12N4O4
    - annotation: !!omap
      - biggr: din_p:0
      - chebi:
        - CHEBI:28997
      - sbo: SBO:0000247
  - !!omap
    - id: 2pg_c
    - name: 2-phosphonato-D-glycerate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C3H4O7P
    - annotation: !!omap
      - biggr: 2pg_c:-3
      - chebi:
        - CHEBI:58289
      - sbo: SBO:0000247
  - !!omap
    - id: ptrc_p
    - name: 1,4-butanediammonium
    - compartment: p
    - charge: 2.0
    - formula: C4H14N2
    - annotation: !!omap
      - biggr: ptrc_p:2
      - chebi:
        - CHEBI:326268
      - sbo: SBO:0000247
  - !!omap
    - id: malt_p
    - name: maltose
    - compartment: p
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: malt_p:0
      - chebi:
        - CHEBI:17306
      - sbo: SBO:0000247
  - !!omap
    - id: pppn_p
    - name: 3-phenylpropionate
    - compartment: p
    - charge: -1.0
    - formula: C9H9O2
    - annotation: !!omap
      - biggr: pppn_p:-1
      - chebi:
        - CHEBI:51057
      - sbo: SBO:0000247
  - !!omap
    - id: arbtn_p
    - name: aerobactinate(3-)
    - compartment: p
    - charge: -3.0
    - formula: C22H33N4O13
    - annotation: !!omap
      - biggr: arbtn_p:-3
      - chebi:
        - CHEBI:58396
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hphhlipa_c
    - name: Heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA
    - compartment: c
    - charge: -8.0
    - formula: C131H231N2O60P3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hphhlipa_c:-8
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__phphhlipa_c
    - name: Phospho-heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA
    - compartment: c
    - charge: -10.0
    - formula: C131H230N2O63P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__phphhlipa_c:-10
      - sbo: SBO:0000247
  - !!omap
    - id: 13dpg_c
    - name: 3-phosphonato-D-glyceroyl phosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C3H4O10P2
    - annotation: !!omap
      - biggr: 13dpg_c:-4
      - chebi:
        - CHEBI:57604
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein3px4p_p
    - name: Two disacharide linked murein units, tripeptide crosslinked 
        tetrapeptide (A2pm->D-ala) (middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C71H107N13O38
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein3px4p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: 34dhpac_e
    - name: 3,4-dihydroxyphenylacetaldehyde
    - compartment: e
    - charge: 0.0
    - formula: C8H8O3
    - annotation: !!omap
      - biggr: 34dhpac_e:0
      - chebi:
        - CHEBI:27978
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1odec11eg3p_c
    - name: 1-octadec-11-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C21H39O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1odec11eg3p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr181_p
    - name: 1,2-di-[(11Z)-octadecenoyl]glycerol
    - compartment: p
    - charge: 0.0
    - formula: C39H72O5
    - annotation: !!omap
      - biggr: 12dgr181_p:0
      - chebi:
        - CHEBI:131832
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm_e
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid
    - compartment: e
    - charge: -1.0
    - formula: C19H29N2O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm_e:-1
      - sbo: SBO:0000247
  - !!omap
    - id: prbamp_c
    - name: 1-(5-phosphonato-beta-D-ribosyl)-5'-AMP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C15H19N5O14P2
    - annotation: !!omap
      - biggr: prbamp_c:-4
      - chebi:
        - CHEBI:59457
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbdrd_c
    - name: Fused thiol:disulfide interchange protein (reduced)
    - compartment: c
    - charge: 0.0
    - formula: XH2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbdrd_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: cu2_p
    - name: copper(2+)
    - compartment: p
    - charge: 2.0
    - formula: Cu
    - annotation: !!omap
      - biggr: cu2_p:2
      - chebi:
        - CHEBI:29036
      - sbo: SBO:0000247
  - !!omap
    - id: sla_c
    - name: 3-sulfolactaldehyde(1-)
    - compartment: c
    - charge: -1.0
    - formula: C3H5O5S
    - annotation: !!omap
      - biggr: sla_c:-1
      - chebi:
        - CHEBI:77135
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__14glucan_p
    - name: 1,4-alpha-D-glucan
    - compartment: p
    - charge: 0.0
    - formula: C36H62O31
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__14glucan_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: grdp_c
    - name: geranyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H17O7P2
    - annotation: !!omap
      - biggr: grdp_c:-3
      - chebi:
        - CHEBI:58057
      - sbo: SBO:0000247
  - !!omap
    - id: ribflv_p
    - name: riboflavin
    - compartment: p
    - charge: 0.0
    - formula: C17H20N4O6
    - annotation: !!omap
      - biggr: ribflv_p:0
      - chebi:
        - CHEBI:17015
      - sbo: SBO:0000247
  - !!omap
    - id: dms_e
    - name: dimethyl sulfide
    - compartment: e
    - charge: 0.0
    - formula: C2H6S
    - annotation: !!omap
      - biggr: dms_e:0
      - chebi:
        - CHEBI:17437
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp141_c
    - name: Phosphatidylglycerophosphate (ditetradec-7-enoyl, n-C14:1)
    - compartment: c
    - charge: -3.0
    - formula: C34H61O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp141_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: cysi__L_c
    - name: L-cystine
    - compartment: c
    - charge: 0.0
    - formula: C6H12N2O4S2
    - annotation: !!omap
      - biggr: cysi__L_c:0
      - chebi:
        - CHEBI:35491
        - CHEBI:16283
      - sbo: SBO:0000247
  - !!omap
    - id: fpram_c
    - name: 2-formamido-N(1)-(5-O-phosphonato-beta-D-ribosyl)acetamidine
    - compartment: c
    - charge: -1.0
    - formula: C8H15N3O8P
    - annotation: !!omap
      - biggr: fpram_c:-1
      - chebi:
        - CHEBI:147287
      - sbo: SBO:0000247
  - !!omap
    - id: f1p_c
    - name: beta-D-fructofuranose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: f1p_c:-2
      - chebi:
        - CHEBI:138881
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbard_p
    - name: Periplasmic protein disulfide isomerase I (reduced)
    - compartment: p
    - charge: 0.0
    - formula: XH2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbard_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: thr__L_c
    - name: L-threonine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: thr__L_c:0
      - chebi:
        - CHEBI:57926
        - CHEBI:16857
      - sbo: SBO:0000247
  - !!omap
    - id: dcyt_p
    - name: 2'-deoxycytidine
    - compartment: p
    - charge: 0.0
    - formula: C9H13N3O4
    - annotation: !!omap
      - biggr: dcyt_p:0
      - chebi:
        - CHEBI:15698
      - sbo: SBO:0000247
  - !!omap
    - id: 2ddglcn_c
    - name: 2-dehydro-3-deoxy-D-gluconate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O6
    - annotation: !!omap
      - biggr: 2ddglcn_c:-1
      - chebi:
        - CHEBI:57990
      - sbo: SBO:0000247
  - !!omap
    - id: fum_p
    - name: fumarate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H2O4
    - annotation: !!omap
      - biggr: fum_p:-2
      - chebi:
        - CHEBI:29806
      - sbo: SBO:0000247
  - !!omap
    - id: galctn__L_e
    - name: L-galactonate
    - compartment: e
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: galctn__L_e:-1
      - chebi:
        - CHEBI:53071
      - sbo: SBO:0000247
  - !!omap
    - id: btn_e
    - name: biotinate
    - compartment: e
    - charge: -1.0
    - formula: C10H15N2O3S
    - annotation: !!omap
      - biggr: btn_e:-1
      - chebi:
        - CHEBI:57586
      - sbo: SBO:0000247
  - !!omap
    - id: pydxn_p
    - name: pyridoxine
    - compartment: p
    - charge: 0.0
    - formula: C8H11NO3
    - annotation: !!omap
      - biggr: pydxn_p:0
      - chebi:
        - CHEBI:16709
      - sbo: SBO:0000247
  - !!omap
    - id: ocdcea_e
    - name: oleate
    - compartment: e
    - charge: -1.0
    - formula: C18H33O2
    - annotation: !!omap
      - biggr: ocdcea_e:-1
      - chebi:
        - CHEBI:30823
      - sbo: SBO:0000247
  - !!omap
    - id: preq0_c
    - name: 7-cyano-7-deazaguanine
    - compartment: c
    - charge: 0.0
    - formula: C7H5N5O
    - annotation: !!omap
      - biggr: preq0_c:0
      - chebi:
        - CHEBI:45075
      - sbo: SBO:0000247
  - !!omap
    - id: tyr__L_p
    - name: L-tyrosine
    - compartment: p
    - charge: 0.0
    - formula: C9H11NO3
    - annotation: !!omap
      - biggr: tyr__L_p:0
      - chebi:
        - CHEBI:58315
        - CHEBI:17895
      - sbo: SBO:0000247
  - !!omap
    - id: dtdp4d6dg_c
    - name: dTDP-4-dehydro-6-deoxy-alpha-D-glucose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H22N2O15P2
    - annotation: !!omap
      - biggr: dtdp4d6dg_c:-2
      - chebi:
        - CHEBI:57649
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__acmum_e
    - name: N-Acetylmuramate
    - compartment: e
    - charge: -1.0
    - formula: C11H18NO8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__acmum_e:-1
      - sbo: SBO:0000247
  - !!omap
    - id: man_p
    - name: D-mannopyranose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: man_p:0
      - chebi:
        - CHEBI:4208
      - sbo: SBO:0000247
  - !!omap
    - id: adocbl_e
    - name: cobamamide
    - compartment: e
    - charge: 0.0
    - formula: C72H100CoN18O17P
    - annotation: !!omap
      - biggr: adocbl_e:0
      - chebi:
        - CHEBI:18408
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iscu_2fe2s_c
    - name: IscU with bound [2Fe-2S] cluster
    - compartment: c
    - charge: -2.0
    - formula: H4O2S8Fe2R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iscu_2fe2s_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: frulysp_c
    - name: fructoselysine 6-phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C12H24N2O10P
    - annotation: !!omap
      - biggr: frulysp_c:-1
      - chebi:
        - CHEBI:61392
      - sbo: SBO:0000247
  - !!omap
    - id: dump_p
    - name: dUMP(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H11N2O8P
    - annotation: !!omap
      - biggr: dump_p:-2
      - chebi:
        - CHEBI:246422
      - sbo: SBO:0000247
  - !!omap
    - id: novbcn_e
    - name: novobiocin
    - compartment: e
    - charge: 0.0
    - formula: C31H36N2O11
    - annotation: !!omap
      - biggr: novbcn_e:0
      - chebi:
        - CHEBI:28368
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feenter_e
    - name: Fe-enterobactin
    - compartment: e
    - charge: 3.0
    - formula: C30H27FeN3O15
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feenter_e:3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__eca4und_p
    - name: (enterobacterial common antigen)x4 undecaprenyl-diphosphate
    - compartment: p
    - charge: -6.0
    - formula: C151H234N12O67P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__eca4und_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: gg4abut_c
    - name: 4-(L-gamma-glutamylamino)butanoate
    - compartment: c
    - charge: -1.0
    - formula: C9H15N2O5
    - annotation: !!omap
      - biggr: gg4abut_c:-1
      - chebi:
        - CHEBI:58800
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__flxr_c
    - name: Flavodoxin reduced
    - compartment: c
    - charge: -1.0
    - formula: XH
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__flxr_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pa160_c
    - name: 1,2-dihexadecanoyl-sn-glycerol-3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C35H67O8P
    - annotation: !!omap
      - biggr: pa160_c:-2
      - chebi:
        - CHEBI:72859
      - sbo: SBO:0000247
  - !!omap
    - id: lcts_c
    - name: lactose
    - compartment: c
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: lcts_c:0
      - chebi:
        - CHEBI:17716
      - sbo: SBO:0000247
  - !!omap
    - id: arbtn_e
    - name: aerobactinate(3-)
    - compartment: e
    - charge: -3.0
    - formula: C22H33N4O13
    - annotation: !!omap
      - biggr: arbtn_e:-3
      - chebi:
        - CHEBI:58396
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdhdec9eg_c
    - name: CDP-1,2-dihexadec-9-enoylglycerol
    - compartment: c
    - charge: -2.0
    - formula: C44H75N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdhdec9eg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: aso3_c
    - name: arsenite(3-)
    - compartment: c
    - charge: -3.0
    - formula: AsO3
    - annotation: !!omap
      - biggr: aso3_c:-3
      - chebi:
        - CHEBI:29866
      - sbo: SBO:0000247
  - !!omap
    - id: progly_c
    - name: L-prolinylglycine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C7H12N2O3
    - annotation: !!omap
      - biggr: progly_c:0
      - chebi:
        - CHEBI:61696
        - CHEBI:61695
      - sbo: SBO:0000247
  - !!omap
    - id: 3ohdcoa_c
    - name: 3-oxopalmitoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C37H60N7O18P3S
    - annotation: !!omap
      - biggr: 3ohdcoa_c:-4
      - chebi:
        - CHEBI:57349
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn161_p
    - name: Cardiolipin (tetrahexadec-9-enoyl, n-C16:1)
    - compartment: p
    - charge: -2.0
    - formula: C73H132O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn161_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 1ddecg3p_p
    - name: 1-lauroyl-sn-glycerol 3-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C15H29O7P
    - annotation: !!omap
      - biggr: 1ddecg3p_p:-2
      - chebi:
        - CHEBI:72682
      - sbo: SBO:0000247
  - !!omap
    - id: gln__L_e
    - name: L-glutamine
    - compartment: e
    - charge: 0.0
    - formula: C5H10N2O3
    - annotation: !!omap
      - biggr: gln__L_e:0
      - chebi:
        - CHEBI:58359
        - CHEBI:18050
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpgn_un_e
    - name: Coprogen unloaded (no Fe(III))
    - compartment: e
    - charge: -4.0
    - formula: C35H52N6O13
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpgn_un_e:-4
      - sbo: SBO:0000247
  - !!omap
    - id: ca2_p
    - name: calcium(2+)
    - compartment: p
    - charge: 2.0
    - formula: Ca
    - annotation: !!omap
      - biggr: ca2_p:2
      - chebi:
        - CHEBI:29108
      - sbo: SBO:0000247
  - !!omap
    - id: tre_e
    - name: alpha,alpha-trehalose
    - compartment: e
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: tre_e:0
      - chebi:
        - CHEBI:16551
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iscssh_c
    - name: IscS with bound sulfur
    - compartment: c
    - charge: 0.0
    - formula: HS2R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iscssh_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: glyald_c
    - name: D-glyceraldehyde
    - compartment: c
    - charge: 0.0
    - formula: C3H6O3
    - annotation: !!omap
      - biggr: glyald_c:0
      - chebi:
        - CHEBI:17378
      - sbo: SBO:0000247
  - !!omap
    - id: alaala_e
    - name: D-alanyl-D-alanine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C6H12N2O3
    - annotation: !!omap
      - biggr: alaala_e:0
      - chebi:
        - CHEBI:57822
        - CHEBI:16576
      - sbo: SBO:0000247
  - !!omap
    - id: novbcn_p
    - name: novobiocin
    - compartment: p
    - charge: 0.0
    - formula: C31H36N2O11
    - annotation: !!omap
      - biggr: novbcn_p:0
      - chebi:
        - CHEBI:28368
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ohexACP_c
    - name: 3-Oxohexanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C17H29N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ohexACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: g3pg_c
    - name: sn-glycero-3-phosphoglycerol(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H14O8P
    - annotation: !!omap
      - biggr: g3pg_c:-1
      - chebi:
        - CHEBI:84515
      - sbo: SBO:0000247
  - !!omap
    - id: rpntp_c
    - name: alpha-D-ribose 1-methylphosphonate 5-triphosphate(5-)
    - compartment: c
    - charge: -5.0
    - formula: C6H11O16P4
    - annotation: !!omap
      - biggr: rpntp_c:-5
      - chebi:
        - CHEBI:68823
      - sbo: SBO:0000247
  - !!omap
    - id: adocbl_c
    - name: cobamamide
    - compartment: c
    - charge: 0.0
    - formula: C72H100CoN18O17P
    - annotation: !!omap
      - biggr: adocbl_c:0
      - chebi:
        - CHEBI:18408
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ocddec5eACP_c
    - name: 3-oxo-cis-dodec-5-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C23H39N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ocddec5eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: gmplys_c
    - name: N(epsilon)-(5'-guanylyl)-N(alpha)-acetyl-L-lysine methyl ester(1-)
    - compartment: c
    - charge: -1.0
    - formula: C19H29N7O10P
    - annotation: !!omap
      - biggr: gmplys_c:-1
      - chebi:
        - CHEBI:64853
      - sbo: SBO:0000247
  - !!omap
    - id: r5p_c
    - name: D-ribofuranose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: r5p_c:-2
      - chebi:
        - CHEBI:78346
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn120_p
    - name: Cardiolipin (tetradodecanoyl, n-C12:0)
    - compartment: p
    - charge: -2.0
    - formula: C57H108O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn120_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: idon__L_e
    - name: L-idonate
    - compartment: e
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: idon__L_e:-1
      - chebi:
        - CHEBI:17796
      - sbo: SBO:0000247
  - !!omap
    - id: akg_c
    - name: 2-oxoglutarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H4O5
    - annotation: !!omap
      - biggr: akg_c:-2
      - chebi:
        - CHEBI:16810
      - sbo: SBO:0000247
  - !!omap
    - id: tcynt_c
    - name: thiocyanate
    - compartment: c
    - charge: -1.0
    - formula: CNS
    - annotation: !!omap
      - biggr: tcynt_c:-1
      - chebi:
        - CHEBI:18022
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg141_c
    - name: Acyl phosphatidylglycerol (n-C14:1)
    - compartment: c
    - charge: -1.0
    - formula: C48H86O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg141_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ac_c
    - name: acetate
    - compartment: c
    - charge: -1.0
    - formula: C2H3O2
    - annotation: !!omap
      - biggr: ac_c:-1
      - chebi:
        - CHEBI:30089
      - sbo: SBO:0000247
  - !!omap
    - id: dca_c
    - name: decanoate
    - compartment: c
    - charge: -1.0
    - formula: C10H19O2
    - annotation: !!omap
      - biggr: dca_c:-1
      - chebi:
        - CHEBI:27689
      - sbo: SBO:0000247
  - !!omap
    - id: pheme_e
    - name: ferroheme b(2-)
    - compartment: e
    - charge: -2.0
    - formula: C34H30FeN4O4
    - annotation: !!omap
      - biggr: pheme_e:-2
      - chebi:
        - CHEBI:60344
      - sbo: SBO:0000247
  - !!omap
    - id: citr__L_c
    - name: L-citrulline
    - compartment: c
    - charge: 0.0
    - formula: C6H13N3O3
    - annotation: !!omap
      - biggr: citr__L_c:0
      - chebi:
        - CHEBI:57743
        - CHEBI:16349
      - sbo: SBO:0000247
  - !!omap
    - id: 3hodcoa_c
    - name: (3S)-3-hydroxyoctadecanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C39H66N7O18P3S
    - annotation: !!omap
      - biggr: 3hodcoa_c:-4
      - chebi:
        - CHEBI:87561
      - sbo: SBO:0000247
  - !!omap
    - id: all__D_e
    - name: aldehydo-D-allose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: all__D_e:0
      - chebi:
        - CHEBI:40822
      - sbo: SBO:0000247
  - !!omap
    - id: ca2_e
    - name: calcium(2+)
    - compartment: e
    - charge: 2.0
    - formula: Ca
    - annotation: !!omap
      - biggr: ca2_e:2
      - chebi:
        - CHEBI:29108
      - sbo: SBO:0000247
  - !!omap
    - id: fe2_p
    - name: iron(2+)
    - compartment: p
    - charge: 2.0
    - formula: Fe
    - annotation: !!omap
      - biggr: fe2_p:2
      - chebi:
        - CHEBI:29033
      - sbo: SBO:0000247
  - !!omap
    - id: dkdglcn_c
    - name: 3-deoxy-D-glycero-hexo-2,5-diulosonate
    - compartment: c
    - charge: -1.0
    - formula: C6H7O6
    - annotation: !!omap
      - biggr: dkdglcn_c:-1
      - chebi:
        - CHEBI:29071
      - sbo: SBO:0000247
  - !!omap
    - id: chtbs_p
    - name: N,N'-diacetylchitobiose
    - compartment: p
    - charge: 0.0
    - formula: C16H28N2O11
    - annotation: !!omap
      - biggr: chtbs_p:0
      - chebi:
        - CHEBI:28681
      - sbo: SBO:0000247
  - !!omap
    - id: 34hpp_c
    - name: 3-(4-hydroxyphenyl)pyruvate
    - compartment: c
    - charge: -1.0
    - formula: C9H7O4
    - annotation: !!omap
      - biggr: 34hpp_c:-1
      - chebi:
        - CHEBI:36242
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fusa_p
    - name: Fusidic acid
    - compartment: p
    - charge: 0.0
    - formula: C31H48O5
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fusa_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__metglcur_c
    - name: 1-O-methyl-Beta-D-glucuronate
    - compartment: c
    - charge: -1.0
    - formula: C7H11O7
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__metglcur_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: g1p_e
    - name: D-glucopyranose 1-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: g1p_e:-2
      - chebi:
        - CHEBI:57629
      - sbo: SBO:0000247
  - !!omap
    - id: duri_c
    - name: 2'-deoxyuridine
    - compartment: c
    - charge: 0.0
    - formula: C9H12N2O5
    - annotation: !!omap
      - biggr: duri_c:0
      - chebi:
        - CHEBI:16450
      - sbo: SBO:0000247
  - !!omap
    - id: udcpdp_p
    - name: ditrans,polycis-undecaprenyl diphosphate(3-)
    - compartment: p
    - charge: -3.0
    - formula: C55H89O7P2
    - annotation: !!omap
      - biggr: udcpdp_p:-3
      - chebi:
        - CHEBI:58405
      - sbo: SBO:0000247
  - !!omap
    - id: ag_e
    - name: silver(1+)
    - compartment: e
    - charge: 1.0
    - formula: Ag
    - annotation: !!omap
      - biggr: ag_e:1
      - chebi:
        - CHEBI:49468
      - sbo: SBO:0000247
  - !!omap
    - id: pep_c
    - name: phosphonatoenolpyruvate
    - compartment: c
    - charge: -3.0
    - formula: C3H2O6P
    - annotation: !!omap
      - biggr: pep_c:-3
      - chebi:
        - CHEBI:58702
      - sbo: SBO:0000247
  - !!omap
    - id: ala_B_c
    - name: beta-alanine
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala_B_c:0
      - chebi:
        - CHEBI:57966
        - CHEBI:16958
      - sbo: SBO:0000247
  - !!omap
    - id: h_c
    - name: hydron
    - compartment: c
    - charge: 1.0
    - formula: H
    - annotation: !!omap
      - biggr: h_c:1
      - chebi:
        - CHEBI:15378
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa141_c
    - name: 1,2-ditetradec-7-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C31H55O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa141_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: no2_e
    - name: nitrite
    - compartment: e
    - charge: -1.0
    - formula: NO2
    - annotation: !!omap
      - biggr: no2_e:-1
      - chebi:
        - CHEBI:16301
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdddecg_c
    - name: CDP-1,2-didodecanoylglycerol
    - compartment: c
    - charge: -2.0
    - formula: C36H63N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdddecg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: rib__D_c
    - name: D-ribofuranose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: rib__D_c:0
      - chebi:
        - CHEBI:47013
      - sbo: SBO:0000247
  - !!omap
    - id: tag6p__D_c
    - name: D-tagatopyranose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: tag6p__D_c:-2
      - chebi:
        - CHEBI:138150
      - sbo: SBO:0000247
  - !!omap
    - id: 2dr1p_c
    - name: 2-deoxy-alpha-D-ribose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O7P
    - annotation: !!omap
      - biggr: 2dr1p_c:-2
      - chebi:
        - CHEBI:57259
      - sbo: SBO:0000247
  - !!omap
    - id: gthrd_c
    - name: glutathionate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H16N3O6S
    - annotation: !!omap
      - biggr: gthrd_c:-1
      - chebi:
        - CHEBI:57925
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe140_p
    - name: Phosphatidylethanolamine (ditetradecanoyl, n-C14:0)
    - compartment: p
    - charge: 0.0
    - formula: C33H66N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe140_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg120_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0)
    - compartment: c
    - charge: -1.0
    - formula: C18H36O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg120_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dhpppn_c
    - name: 3-(2,3-dihydroxyphenyl)propanoate
    - compartment: c
    - charge: -1.0
    - formula: C9H9O4
    - annotation: !!omap
      - biggr: dhpppn_c:-1
      - chebi:
        - CHEBI:46951
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2tdecg3p_p
    - name: 2-tetradecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C17H34O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2tdecg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ala__L_e
    - name: L-alanine
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala__L_e:0
      - chebi:
        - CHEBI:57972
        - CHEBI:16977
      - sbo: SBO:0000247
  - !!omap
    - id: g6p_e
    - name: D-glucopyranose 6-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: g6p_e:-2
      - chebi:
        - CHEBI:61548
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__actACP_c
    - name: Acetoacetyl-ACP
    - compartment: c
    - charge: -1.0
    - formula: C15H25N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__actACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2odecg3p_c
    - name: 2-octadecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C21H42O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2odecg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: hdcea_c
    - name: palmitoleate
    - compartment: c
    - charge: -1.0
    - formula: C16H29O2
    - annotation: !!omap
      - biggr: hdcea_c:-1
      - chebi:
        - CHEBI:32372
      - sbo: SBO:0000247
  - !!omap
    - id: hdcoa_c
    - name: palmitoleoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C37H60N7O17P3S
    - annotation: !!omap
      - biggr: hdcoa_c:-4
      - chebi:
        - CHEBI:61540
      - sbo: SBO:0000247
  - !!omap
    - id: actp_c
    - name: acetyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C2H3O5P
    - annotation: !!omap
      - biggr: actp_c:-2
      - chebi:
        - CHEBI:22191
      - sbo: SBO:0000247
  - !!omap
    - id: 2pglyc_c
    - name: 2-phosphonatoglycolate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C2H2O6P
    - annotation: !!omap
      - biggr: 2pglyc_c:-3
      - chebi:
        - CHEBI:58033
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16a4colipa_e
    - name: (O16 antigen)x4 core oligosaccharide lipid A
    - compartment: e
    - charge: -11.0
    - formula: C312H523N6O200P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16a4colipa_e:-11
      - sbo: SBO:0000247
  - !!omap
    - id: acgam6p_c
    - name: N-acetyl-D-glucosamine 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acgam6p_c:-2
      - chebi:
        - CHEBI:57513
      - sbo: SBO:0000247
  - !!omap
    - id: g3pc_c
    - name: choline alfoscerate
    - compartment: c
    - charge: 0.0
    - formula: C8H20NO6P
    - annotation: !!omap
      - biggr: g3pc_c:0
      - chebi:
        - CHEBI:16870
      - sbo: SBO:0000247
  - !!omap
    - id: thmpp_c
    - name: thiamine(1+) diphosphate(3-)
    - compartment: c
    - charge: -2.0
    - formula: C12H16N4O7P2S
    - annotation: !!omap
      - biggr: thmpp_c:-2
      - chebi:
        - CHEBI:58937
      - sbo: SBO:0000247
  - !!omap
    - id: dmbzid_c
    - name: 5,6-dimethylbenzimidazole
    - compartment: c
    - charge: 0.0
    - formula: C9H10N2
    - annotation: !!omap
      - biggr: dmbzid_c:0
      - chebi:
        - CHEBI:15890
      - sbo: SBO:0000247
  - !!omap
    - id: val__L_p
    - name: L-valine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C5H11NO2
    - annotation: !!omap
      - biggr: val__L_p:0
      - chebi:
        - CHEBI:57762
        - CHEBI:16414
      - sbo: SBO:0000247
  - !!omap
    - id: xtp_c
    - name: XTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H11N4O15P3
    - annotation: !!omap
      - biggr: xtp_c:-4
      - chebi:
        - CHEBI:61314
      - sbo: SBO:0000247
  - !!omap
    - id: udcpgl_c
    - name: alpha-D-glucosyl ditrans,polycis-undecaprenyl diphosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C61H100O12P2
    - annotation: !!omap
      - biggr: udcpgl_c:-2
      - chebi:
        - CHEBI:61254
      - sbo: SBO:0000247
  - !!omap
    - id: mepn_c
    - name: methylphosphonate(1-)
    - compartment: c
    - charge: -1.0
    - formula: CH4O3P
    - annotation: !!omap
      - biggr: mepn_c:-1
      - chebi:
        - CHEBI:68684
      - sbo: SBO:0000247
  - !!omap
    - id: ppt_p
    - name: hydrogenphosphite
    - compartment: p
    - charge: -2.0
    - formula: HO3P
    - annotation: !!omap
      - biggr: ppt_p:-2
      - chebi:
        - CHEBI:16215
        - CHEBI:29259
      - sbo: SBO:0000247
  - !!omap
    - id: mepn_p
    - name: methylphosphonate(1-)
    - compartment: p
    - charge: -1.0
    - formula: CH4O3P
    - annotation: !!omap
      - biggr: mepn_p:-1
      - chebi:
        - CHEBI:68684
      - sbo: SBO:0000247
  - !!omap
    - id: cd2_c
    - name: cadmium(2+)
    - compartment: c
    - charge: 2.0
    - formula: Cd
    - annotation: !!omap
      - biggr: cd2_c:2
      - chebi:
        - CHEBI:48775
      - sbo: SBO:0000247
  - !!omap
    - id: pyr_p
    - name: pyruvate
    - compartment: p
    - charge: -1.0
    - formula: C3H3O3
    - annotation: !!omap
      - biggr: pyr_p:-1
      - chebi:
        - CHEBI:15361
      - sbo: SBO:0000247
  - !!omap
    - id: tcynt_p
    - name: thiocyanate
    - compartment: p
    - charge: -1.0
    - formula: CNS
    - annotation: !!omap
      - biggr: tcynt_p:-1
      - chebi:
        - CHEBI:18022
      - sbo: SBO:0000247
  - !!omap
    - id: ni2_c
    - name: nickel(2+)
    - compartment: c
    - charge: 2.0
    - formula: Ni
    - annotation: !!omap
      - biggr: ni2_c:2
      - chebi:
        - CHEBI:49786
      - sbo: SBO:0000247
  - !!omap
    - id: acanth_c
    - name: N-acetylanthranilate
    - compartment: c
    - charge: -1.0
    - formula: C9H8NO3
    - annotation: !!omap
      - biggr: acanth_c:-1
      - chebi:
        - CHEBI:16803
      - sbo: SBO:0000247
  - !!omap
    - id: cyst__L_c
    - name: L-cystathionine
    - compartment: c
    - charge: 0.0
    - formula: C7H14N2O4S
    - annotation: !!omap
      - biggr: cyst__L_c:0
      - chebi:
        - CHEBI:58161
        - CHEBI:17482
      - sbo: SBO:0000247
  - !!omap
    - id: so2_p
    - name: sulfur dioxide
    - compartment: p
    - charge: 0.0
    - formula: O2S
    - annotation: !!omap
      - biggr: so2_p:0
      - chebi:
        - CHEBI:18422
      - sbo: SBO:0000247
  - !!omap
    - id: peamn_p
    - name: 2-phenylethanaminium
    - compartment: p
    - charge: 1.0
    - formula: C8H12N
    - annotation: !!omap
      - biggr: peamn_p:1
      - chebi:
        - CHEBI:225237
      - sbo: SBO:0000247
  - !!omap
    - id: mso3_e
    - name: methanesulfonate
    - compartment: e
    - charge: -1.0
    - formula: CH3O3S
    - annotation: !!omap
      - biggr: mso3_e:-1
      - chebi:
        - CHEBI:25224
      - sbo: SBO:0000247
  - !!omap
    - id: mn2_c
    - name: manganese(2+)
    - compartment: c
    - charge: 2.0
    - formula: Mn
    - annotation: !!omap
      - biggr: mn2_c:2
      - chebi:
        - CHEBI:29035
      - sbo: SBO:0000247
  - !!omap
    - id: dutp_c
    - name: dUTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C9H11N2O14P3
    - annotation: !!omap
      - biggr: dutp_c:-4
      - chebi:
        - CHEBI:61555
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5p5p_p
    - name: Two linked disacharide pentapeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C80H124N16O42
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5p5p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: dmlz_c
    - name: 6,7-dimethyl-8-(1-D-ribityl)lumazine
    - compartment: c
    - charge: 0.0
    - formula: C13H18N4O6
    - annotation: !!omap
      - biggr: dmlz_c:0
      - chebi:
        - CHEBI:17601
      - sbo: SBO:0000247
  - !!omap
    - id: pan4p_c
    - name: D-pantetheine 4'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C11H21N2O7PS
    - annotation: !!omap
      - biggr: pan4p_c:-2
      - chebi:
        - CHEBI:61723
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa181_c
    - name: 1,2-dioctadec-11-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C39H71O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa181_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: thrp_e
    - name: O-phosphonato-L-threonine(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H8NO6P
    - annotation: !!omap
      - biggr: thrp_e:-2
      - chebi:
        - CHEBI:58675
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg181_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)
    - compartment: p
    - charge: -1.0
    - formula: C24H46O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg181_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: adprib_c
    - name: ADP-D-ribose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C15H21N5O14P2
    - annotation: !!omap
      - biggr: adprib_c:-2
      - chebi:
        - CHEBI:57967
      - sbo: SBO:0000247
  - !!omap
    - id: octa_c
    - name: octanoate
    - compartment: c
    - charge: -1.0
    - formula: C8H15O2
    - annotation: !!omap
      - biggr: octa_c:-1
      - chebi:
        - CHEBI:25646
      - sbo: SBO:0000247
  - !!omap
    - id: quln_c
    - name: quinolinate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H3NO4
    - annotation: !!omap
      - biggr: quln_c:-2
      - chebi:
        - CHEBI:29959
      - sbo: SBO:0000247
  - !!omap
    - id: tdecoa_c
    - name: (9Z)-myristoleoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C35H56N7O17P3S
    - annotation: !!omap
      - biggr: tdecoa_c:-4
      - chebi:
        - CHEBI:65060
      - sbo: SBO:0000247
  - !!omap
    - id: 1odecg3p_p
    - name: 1-stearoyl-sn-glycero-3-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C21H41O7P
    - annotation: !!omap
      - biggr: 1odecg3p_p:-2
      - chebi:
        - CHEBI:74565
      - sbo: SBO:0000247
  - !!omap
    - id: dxyl_c
    - name: 1-deoxy-D-xylulose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O4
    - annotation: !!omap
      - biggr: dxyl_c:0
      - chebi:
        - CHEBI:28354
      - sbo: SBO:0000247
  - !!omap
    - id: dhptd_c
    - name: (S)-4,5-dihydroxypentane-2,3-dione
    - compartment: c
    - charge: 0.0
    - formula: C5H8O4
    - annotation: !!omap
      - biggr: dhptd_c:0
      - chebi:
        - CHEBI:29484
      - sbo: SBO:0000247
  - !!omap
    - id: thym_p
    - name: thymine
    - compartment: p
    - charge: 0.0
    - formula: C5H6N2O2
    - annotation: !!omap
      - biggr: thym_p:0
      - chebi:
        - CHEBI:17821
      - sbo: SBO:0000247
  - !!omap
    - id: LalaLglu_e
    - name: L-alanyl-L-glutamate(1-)
    - compartment: e
    - charge: -1.0
    - formula: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaLglu_e:-1
      - chebi:
        - CHEBI:61396
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__mocogdp_c
    - name: Molybdopterin guanine dinucleotide
    - compartment: c
    - charge: -2.0
    - formula: C20H22N10O15P2S2Mo
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__mocogdp_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: lipa_c
    - name: (Kdo)2-lipid A(6-) (E. coli)
    - compartment: c
    - charge: -6.0
    - formula: C110H196N2O39P2
    - annotation: !!omap
      - biggr: lipa_c:-6
      - chebi:
        - CHEBI:58540
      - sbo: SBO:0000247
  - !!omap
    - id: mththf_c
    - name: (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: mththf_c:0
      - chebi:
        - CHEBI:44800
      - sbo: SBO:0000247
  - !!omap
    - id: sheme_c
    - name: siroheme(8-)
    - compartment: c
    - charge: -8.0
    - formula: C42H36FeN4O16
    - annotation: !!omap
      - biggr: sheme_c:-8
      - chebi:
        - CHEBI:60052
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sufbcd_2fe2s_c
    - name: SufBCD with bound [2Fe-2S] cluster
    - compartment: c
    - charge: -2.0
    - formula: H4O2S8Fe2R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sufbcd_2fe2s_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: all__D_p
    - name: aldehydo-D-allose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: all__D_p:0
      - chebi:
        - CHEBI:40822
      - sbo: SBO:0000247
  - !!omap
    - id: metsox_R__L_e
    - name: L-methionine (R)-S-oxide
    - compartment: e
    - charge: 0.0
    - formula: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_R__L_e:0
      - chebi:
        - CHEBI:58773
        - CHEBI:49032
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bwco_c
    - name: Tungsten bispterin cofactor
    - compartment: c
    - charge: -4.0
    - formula: C20H20N10O13P2S4W
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bwco_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: pheme_p
    - name: ferroheme b(2-)
    - compartment: p
    - charge: -2.0
    - formula: C34H30FeN4O4
    - annotation: !!omap
      - biggr: pheme_p:-2
      - chebi:
        - CHEBI:60344
      - sbo: SBO:0000247
  - !!omap
    - id: h2o_p
    - name: water
    - compartment: p
    - charge: 0.0
    - formula: H2O
    - annotation: !!omap
      - biggr: h2o_p:0
      - chebi:
        - CHEBI:15377
      - sbo: SBO:0000247
  - !!omap
    - id: f_p
    - name: fluoride
    - compartment: p
    - charge: -1.0
    - formula: F
    - annotation: !!omap
      - biggr: f_p:-1
      - chebi:
        - CHEBI:17051
      - sbo: SBO:0000247
  - !!omap
    - id: hdca_p
    - name: hexadecanoate
    - compartment: p
    - charge: -1.0
    - formula: C16H31O2
    - annotation: !!omap
      - biggr: hdca_p:-1
      - chebi:
        - CHEBI:7896
      - sbo: SBO:0000247
  - !!omap
    - id: fru_c
    - name: beta-D-fructofuranose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: fru_c:0
      - chebi:
        - CHEBI:28645
      - sbo: SBO:0000247
  - !!omap
    - id: gal1p_p
    - name: alpha-D-galactose 1-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: gal1p_p:-2
      - chebi:
        - CHEBI:58336
      - sbo: SBO:0000247
  - !!omap
    - id: g3pe_e
    - name: glycerophosphatidylethanolamine
    - compartment: e
    - charge: 0.0
    - formula: C5H14NO6P
    - annotation: !!omap
      - biggr: g3pe_e:0
      - chebi:
        - CHEBI:52330
      - sbo: SBO:0000247
  - !!omap
    - id: dimp_p
    - name: 2'-deoxyinosine 5'-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H11N4O7P
    - annotation: !!omap
      - biggr: dimp_p:-2
      - chebi:
        - CHEBI:61194
      - sbo: SBO:0000247
  - !!omap
    - id: glyc3p_c
    - name: sn-glycerol 3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H7O6P
    - annotation: !!omap
      - biggr: glyc3p_c:-2
      - chebi:
        - CHEBI:57597
      - sbo: SBO:0000247
  - !!omap
    - id: ctbt_p
    - name: (E)-4-(trimethylammonio)but-2-enoate
    - compartment: p
    - charge: 0.0
    - formula: C7H13NO2
    - annotation: !!omap
      - biggr: ctbt_p:0
      - chebi:
        - CHEBI:17237
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhm3p_c
    - name: 1,6-anhydrous-N-Acetylmuramyl-tripeptide
    - compartment: c
    - charge: -2.0
    - formula: C26H39N5O14
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhm3p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 2ahbut_c
    - name: (S)-2-acetyl-2-hydroxybutanoate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O4
    - annotation: !!omap
      - biggr: 2ahbut_c:-1
      - chebi:
        - CHEBI:49256
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn140_p
    - name: Cardiolipin (tetratetradecanoyl, n-C14:0)
    - compartment: p
    - charge: -2.0
    - formula: C65H124O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn140_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5p4p_p
    - name: Two linked disacharide pentapeptide and tetrapeptide murein units 
        (uncrosslinked, middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C77H119N15O41
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5p4p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: ser__L_c
    - name: L-serine
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO3
    - annotation: !!omap
      - biggr: ser__L_c:0
      - chebi:
        - CHEBI:33384
        - CHEBI:17115
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__toct2eACP_c
    - name: Trans-Oct-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C19H33N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__toct2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn141_p
    - name: Cardiolipin (tetratetradec-7-enoyl, n-C14:1)
    - compartment: p
    - charge: -2.0
    - formula: C65H116O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn141_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr180_p
    - name: 1,2-dioctadecanoyl-sn-glycerol
    - compartment: p
    - charge: 0.0
    - formula: C39H76O5
    - annotation: !!omap
      - biggr: 12dgr180_p:0
      - chebi:
        - CHEBI:41847
      - sbo: SBO:0000247
  - !!omap
    - id: 2agpe140_p
    - name: PE(0:0/14:0)
    - compartment: p
    - charge: 0.0
    - formula: C19H40NO7P
    - annotation: !!omap
      - biggr: 2agpe140_p:0
      - chebi:
        - CHEBI:145244
      - sbo: SBO:0000247
  - !!omap
    - id: ump_c
    - name: uridine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H11N2O9P
    - annotation: !!omap
      - biggr: ump_c:-2
      - chebi:
        - CHEBI:57865
      - sbo: SBO:0000247
  - !!omap
    - id: 5drib_c
    - name: 5-deoxy-D-ribose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O4
    - annotation: !!omap
      - biggr: 5drib_c:0
      - chebi:
        - CHEBI:62012
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe120_c
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C12:0)
    - compartment: c
    - charge: 0.0
    - formula: C17H36NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe120_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 4c2me_c
    - name: 4-CDP-2-C-methyl-D-erythritol(2-)
    - compartment: c
    - charge: -2.0
    - formula: C14H23N3O14P2
    - annotation: !!omap
      - biggr: 4c2me_c:-2
      - chebi:
        - CHEBI:57823
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpg181_p
    - name: 1-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)
    - compartment: p
    - charge: -1.0
    - formula: C24H46O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpg181_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: oxalcoa_c
    - name: oxalyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C23H31N7O19P3S
    - annotation: !!omap
      - biggr: oxalcoa_c:-5
      - chebi:
        - CHEBI:57388
      - sbo: SBO:0000247
  - !!omap
    - id: uracp_c
    - name: ureidoperacrylic acid
    - compartment: c
    - charge: 0.0
    - formula: C4H6N2O4
    - annotation: !!omap
      - biggr: uracp_c:0
      - chebi:
        - CHEBI:59889
      - sbo: SBO:0000247
  - !!omap
    - id: preq1_c
    - name: 7-ammoniomethyl-7-deazaguanine
    - compartment: c
    - charge: 1.0
    - formula: C7H10N5O
    - annotation: !!omap
      - biggr: preq1_c:1
      - chebi:
        - CHEBI:58703
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bmoco_c
    - name: Bis-molybdenum cofactor
    - compartment: c
    - charge: -4.0
    - formula: C20H20N10O13P2S4Mo
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bmoco_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hdceap_c
    - name: Hexadecanoyl-phosphate (n-C16:1)
    - compartment: c
    - charge: -1.0
    - formula: C16H30O5P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hdceap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ade_e
    - name: adenine
    - compartment: e
    - charge: 0.0
    - formula: C5H5N5
    - annotation: !!omap
      - biggr: ade_e:0
      - chebi:
        - CHEBI:16708
      - sbo: SBO:0000247
  - !!omap
    - id: mepn_e
    - name: methylphosphonate(1-)
    - compartment: e
    - charge: -1.0
    - formula: CH4O3P
    - annotation: !!omap
      - biggr: mepn_e:-1
      - chebi:
        - CHEBI:68684
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bmoco1gdp_c
    - name: Bis-molybdopterin mono-guanine dinucleotide
    - compartment: c
    - charge: -4.0
    - formula: C30H32N15O20P3S4Mo
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bmoco1gdp_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: rmn_e
    - name: L-rhamnopyranose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: rmn_e:0
      - chebi:
        - CHEBI:62346
      - sbo: SBO:0000247
  - !!omap
    - id: f_e
    - name: fluoride
    - compartment: e
    - charge: -1.0
    - formula: F
    - annotation: !!omap
      - biggr: f_e:-1
      - chebi:
        - CHEBI:17051
      - sbo: SBO:0000247
  - !!omap
    - id: 3pg_c
    - name: 3-phosphonato-D-glycerate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C3H4O7P
    - annotation: !!omap
      - biggr: 3pg_c:-3
      - chebi:
        - CHEBI:58272
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iprimv_c
    - name: Isoprimeverose
    - compartment: c
    - charge: 0.0
    - formula: C11H20O10
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iprimv_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 2dhguln_c
    - name: 2-dehydro-L-idonate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: 2dhguln_c:-1
      - chebi:
        - CHEBI:36602
      - sbo: SBO:0000247
  - !!omap
    - id: psuri_c
    - name: pseudouridine
    - compartment: c
    - charge: 0.0
    - formula: C9H12N2O6
    - annotation: !!omap
      - biggr: psuri_c:0
      - chebi:
        - CHEBI:17802
      - sbo: SBO:0000247
  - !!omap
    - id: ctp_c
    - name: CTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C9H12N3O14P3
    - annotation: !!omap
      - biggr: ctp_c:-4
      - chebi:
        - CHEBI:37563
      - sbo: SBO:0000247
  - !!omap
    - id: dadp_c
    - name: dADP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H12N5O9P2
    - annotation: !!omap
      - biggr: dadp_c:-3
      - chebi:
        - CHEBI:57667
      - sbo: SBO:0000247
  - !!omap
    - id: 2ddglcn_e
    - name: 2-dehydro-3-deoxy-D-gluconate
    - compartment: e
    - charge: -1.0
    - formula: C6H9O6
    - annotation: !!omap
      - biggr: 2ddglcn_e:-1
      - chebi:
        - CHEBI:57990
      - sbo: SBO:0000247
  - !!omap
    - id: xan_c
    - name: 7H-xanthine
    - compartment: c
    - charge: 0.0
    - formula: C5H4N4O2
    - annotation: !!omap
      - biggr: xan_c:0
      - chebi:
        - CHEBI:17712
        - CHEBI:48517
      - sbo: SBO:0000247
  - !!omap
    - id: xu5p__D_c
    - name: D-xylulose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: xu5p__D_c:-2
      - chebi:
        - CHEBI:57737
      - sbo: SBO:0000247
  - !!omap
    - id: aspsa_c
    - name: L-aspartic acid 4-semialdehyde
    - compartment: c
    - charge: 0.0
    - formula: C4H7NO3
    - annotation: !!omap
      - biggr: aspsa_c:0
      - chebi:
        - CHEBI:537519
        - CHEBI:18051
      - sbo: SBO:0000247
  - !!omap
    - id: glyb_e
    - name: glycine betaine
    - compartment: e
    - charge: 0.0
    - formula: C5H11NO2
    - annotation: !!omap
      - biggr: glyb_e:0
      - chebi:
        - CHEBI:17750
      - sbo: SBO:0000247
  - !!omap
    - id: xtsn_c
    - name: xanthosine
    - compartment: c
    - charge: 0.0
    - formula: C10H12N4O6
    - annotation: !!omap
      - biggr: xtsn_c:0
      - chebi:
        - CHEBI:18107
      - sbo: SBO:0000247
  - !!omap
    - id: 2p4c2me_c
    - name: 4-CDP-2-C-methyl-D-erythritol 2-phosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C14H22N3O17P3
    - annotation: !!omap
      - biggr: 2p4c2me_c:-4
      - chebi:
        - CHEBI:57919
      - sbo: SBO:0000247
  - !!omap
    - id: glcr_e
    - name: D-glucarate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H8O8
    - annotation: !!omap
      - biggr: glcr_e:-2
      - chebi:
        - CHEBI:30612
      - sbo: SBO:0000247
  - !!omap
    - id: lgt__S_c
    - name: (R)-S-lactoylglutathionate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C13H20N3O8S
    - annotation: !!omap
      - biggr: lgt__S_c:-1
      - chebi:
        - CHEBI:57474
      - sbo: SBO:0000247
  - !!omap
    - id: alltn_e
    - name: 1-(5-hydroxy-2-oxo-2,3-dihydroimidazol-4-yl)urea
    - compartment: e
    - charge: 0.0
    - formula: C4H6N4O3
    - annotation: !!omap
      - biggr: alltn_e:0
      - chebi:
        - CHEBI:15676
        - CHEBI:74345
      - sbo: SBO:0000247
  - !!omap
    - id: cyan_c
    - name: hydrogen cyanide
    - compartment: c
    - charge: 0.0
    - formula: CHN
    - annotation: !!omap
      - biggr: cyan_c:0
      - chebi:
        - CHEBI:18407
        - CHEBI:36856
      - sbo: SBO:0000247
  - !!omap
    - id: f6p_e
    - name: beta-D-fructofuranose 6-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: f6p_e:-2
      - chebi:
        - CHEBI:57634
      - sbo: SBO:0000247
  - !!omap
    - id: gam1p_c
    - name: alpha-D-glucosamine 1-phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: gam1p_c:-1
      - chebi:
        - CHEBI:58516
      - sbo: SBO:0000247
  - !!omap
    - id: cu2_e
    - name: copper(2+)
    - compartment: e
    - charge: 2.0
    - formula: Cu
    - annotation: !!omap
      - biggr: cu2_e:2
      - chebi:
        - CHEBI:29036
      - sbo: SBO:0000247
  - !!omap
    - id: zn2_e
    - name: zinc(2+)
    - compartment: e
    - charge: 2.0
    - formula: Zn
    - annotation: !!omap
      - biggr: zn2_e:2
      - chebi:
        - CHEBI:29105
      - sbo: SBO:0000247
  - !!omap
    - id: ura_e
    - name: uracil
    - compartment: e
    - charge: 0.0
    - formula: C4H4N2O2
    - annotation: !!omap
      - biggr: ura_e:0
      - chebi:
        - CHEBI:17568
      - sbo: SBO:0000247
  - !!omap
    - id: fadh2_c
    - name: FADH2(2-)
    - compartment: c
    - charge: -2.0
    - formula: C27H33N9O15P2
    - annotation: !!omap
      - biggr: fadh2_c:-2
      - chebi:
        - CHEBI:58307
      - sbo: SBO:0000247
  - !!omap
    - id: dhpmp_c
    - name: 7,8-dihydroneopterin 3'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H12N5O7P
    - annotation: !!omap
      - biggr: dhpmp_c:-2
      - chebi:
        - CHEBI:58762
      - sbo: SBO:0000247
  - !!omap
    - id: 15dap_p
    - name: cadaverine(2+)
    - compartment: p
    - charge: 2.0
    - formula: C5H16N2
    - annotation: !!omap
      - biggr: 15dap_p:2
      - chebi:
        - CHEBI:58384
      - sbo: SBO:0000247
  - !!omap
    - id: pppi_c
    - name: triphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: HO10P3
    - annotation: !!omap
      - biggr: pppi_c:-4
      - chebi:
        - CHEBI:48316
      - sbo: SBO:0000247
  - !!omap
    - id: lys__L_e
    - name: L-lysinium(1+)
    - compartment: e
    - charge: 1.0
    - formula: C6H15N2O2
    - annotation: !!omap
      - biggr: lys__L_e:1
      - chebi:
        - CHEBI:32551
      - sbo: SBO:0000247
  - !!omap
    - id: cynt_c
    - name: cyanate
    - compartment: c
    - charge: -1.0
    - formula: CNO
    - annotation: !!omap
      - biggr: cynt_c:-1
      - chebi:
        - CHEBI:29195
      - sbo: SBO:0000247
  - !!omap
    - id: xu5p__L_c
    - name: L-xylulose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: xu5p__L_c:-2
      - chebi:
        - CHEBI:57829
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ascb6p_c
    - name: L-ascorbate-6-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C6H7O9P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ascb6p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: acmum6p_c
    - name: N-acetyl-beta-muramate 6-phosphate
    - compartment: c
    - charge: -3.0
    - formula: C11H17NO11P
    - annotation: !!omap
      - biggr: acmum6p_c:-3
      - chebi:
        - CHEBI:58721
      - sbo: SBO:0000247
  - !!omap
    - id: ocdca_e
    - name: octadecanoate
    - compartment: e
    - charge: -1.0
    - formula: C18H35O2
    - annotation: !!omap
      - biggr: ocdca_e:-1
      - chebi:
        - CHEBI:25629
      - sbo: SBO:0000247
  - !!omap
    - id: glyclt_c
    - name: glycolate
    - compartment: c
    - charge: -1.0
    - formula: C2H3O3
    - annotation: !!omap
      - biggr: glyclt_c:-1
      - chebi:
        - CHEBI:29805
      - sbo: SBO:0000247
  - !!omap
    - id: ppap_c
    - name: propanoyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H5O5P
    - annotation: !!omap
      - biggr: ppap_c:-2
      - chebi:
        - CHEBI:58933
      - sbo: SBO:0000247
  - !!omap
    - id: hkntd_c
    - name: 2-hydroxy-6-oxonona-2,4,7-trienedioate
    - compartment: c
    - charge: -2.0
    - formula: C9H6O6
    - annotation: !!omap
      - biggr: hkntd_c:-2
      - chebi:
        - CHEBI:58637
      - sbo: SBO:0000247
  - !!omap
    - id: gp4g_c
    - name: P(1),P(4)-bis(5'-guanosyl) tetraphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C20H24N10O21P4
    - annotation: !!omap
      - biggr: gp4g_c:-4
      - chebi:
        - CHEBI:57553
      - sbo: SBO:0000247
  - !!omap
    - id: all__D_c
    - name: aldehydo-D-allose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: all__D_c:0
      - chebi:
        - CHEBI:40822
      - sbo: SBO:0000247
  - !!omap
    - id: acnam_p
    - name: N-acetyl-beta-neuraminate
    - compartment: p
    - charge: -1.0
    - formula: C11H18NO9
    - annotation: !!omap
      - biggr: acnam_p:-1
      - chebi:
        - CHEBI:58705
      - sbo: SBO:0000247
  - !!omap
    - id: sucr_p
    - name: sucrose
    - compartment: p
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: sucr_p:0
      - chebi:
        - CHEBI:17992
      - sbo: SBO:0000247
  - !!omap
    - id: g6p_p
    - name: D-glucopyranose 6-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: g6p_p:-2
      - chebi:
        - CHEBI:61548
      - sbo: SBO:0000247
  - !!omap
    - id: glyb_c
    - name: glycine betaine
    - compartment: c
    - charge: 0.0
    - formula: C5H11NO2
    - annotation: !!omap
      - biggr: glyb_c:0
      - chebi:
        - CHEBI:17750
      - sbo: SBO:0000247
  - !!omap
    - id: gmp_e
    - name: guanosine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H12N5O8P
    - annotation: !!omap
      - biggr: gmp_e:-2
      - chebi:
        - CHEBI:58115
      - sbo: SBO:0000247
  - !!omap
    - id: phaccoa_c
    - name: phenylacetyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H38N7O17P3S
    - annotation: !!omap
      - biggr: phaccoa_c:-4
      - chebi:
        - CHEBI:57390
      - sbo: SBO:0000247
  - !!omap
    - id: but_e
    - name: butyrate
    - compartment: e
    - charge: -1.0
    - formula: C4H7O2
    - annotation: !!omap
      - biggr: but_e:-1
      - chebi:
        - CHEBI:17968
      - sbo: SBO:0000247
  - !!omap
    - id: pnto__R_p
    - name: (R)-pantothenate
    - compartment: p
    - charge: -1.0
    - formula: C9H16NO5
    - annotation: !!omap
      - biggr: pnto__R_p:-1
      - chebi:
        - CHEBI:29032
      - sbo: SBO:0000247
  - !!omap
    - id: isetac_p
    - name: isethionate
    - compartment: p
    - charge: -1.0
    - formula: C2H5O4S
    - annotation: !!omap
      - biggr: isetac_p:-1
      - chebi:
        - CHEBI:61904
      - sbo: SBO:0000247
  - !!omap
    - id: amp_p
    - name: adenosine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: amp_p:-2
      - chebi:
        - CHEBI:456215
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__kdo2lipid4p_c
    - name: KDO(2)-lipid IV(A) with palmitoleoyl
    - compartment: c
    - charge: -6.0
    - formula: C100H176N2O38P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__kdo2lipid4p_c:-6
      - sbo: SBO:0000247
  - !!omap
    - id: dhmptp_c
    - name: 7,8-dihydromonapterin 3-triphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C9H12N5O13P3
    - annotation: !!omap
      - biggr: dhmptp_c:-4
      - chebi:
        - CHEBI:61186
      - sbo: SBO:0000247
  - !!omap
    - id: cobalt2_e
    - name: cobalt(2+)
    - compartment: e
    - charge: 2.0
    - formula: Co
    - annotation: !!omap
      - biggr: cobalt2_e:2
      - chebi:
        - CHEBI:48828
      - sbo: SBO:0000247
  - !!omap
    - id: cbl1_c
    - name: cob(I)alamin(1-)
    - compartment: c
    - charge: -1.0
    - formula: C62H88CoN13O14P
    - annotation: !!omap
      - biggr: cbl1_c:-1
      - chebi:
        - CHEBI:60488
      - sbo: SBO:0000247
  - !!omap
    - id: gal_bD_p
    - name: beta-D-galactose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: gal_bD_p:0
      - chebi:
        - CHEBI:27667
      - sbo: SBO:0000247
  - !!omap
    - id: alaala_p
    - name: D-alanyl-D-alanine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C6H12N2O3
    - annotation: !!omap
      - biggr: alaala_p:0
      - chebi:
        - CHEBI:57822
        - CHEBI:16576
      - sbo: SBO:0000247
  - !!omap
    - id: fald_p
    - name: formaldehyde
    - compartment: p
    - charge: 0.0
    - formula: CH2O
    - annotation: !!omap
      - biggr: fald_p:0
      - chebi:
        - CHEBI:16842
      - sbo: SBO:0000247
  - !!omap
    - id: uri_p
    - name: uridine
    - compartment: p
    - charge: 0.0
    - formula: C9H12N2O6
    - annotation: !!omap
      - biggr: uri_p:0
      - chebi:
        - CHEBI:16704
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__thex2eACP_c
    - name: Trans-Hex-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C17H29N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__thex2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ocdcea_p
    - name: oleate
    - compartment: p
    - charge: -1.0
    - formula: C18H33O2
    - annotation: !!omap
      - biggr: ocdcea_p:-1
      - chebi:
        - CHEBI:30823
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__LalaDgluMdapDala_e
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine
    - compartment: e
    - charge: -1.0
    - formula: C18H30N5O9
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LalaDgluMdapDala_e:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__t3c9palmeACP_c
    - name: Trans-3-cis-9-palmitoleoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C27H47N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__t3c9palmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: hlipa_c
    - name: heptosyl-(KDO)2-lipid A(6-)
    - compartment: c
    - charge: -6.0
    - formula: C117H208N2O45P2
    - annotation: !!omap
      - biggr: hlipa_c:-6
      - chebi:
        - CHEBI:61502
      - sbo: SBO:0000247
  - !!omap
    - id: dimp_c
    - name: 2'-deoxyinosine 5'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H11N4O7P
    - annotation: !!omap
      - biggr: dimp_c:-2
      - chebi:
        - CHEBI:61194
      - sbo: SBO:0000247
  - !!omap
    - id: octdececoa_c
    - name: oleoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C39H64N7O17P3S
    - annotation: !!omap
      - biggr: octdececoa_c:-4
      - chebi:
        - CHEBI:57387
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpe160_c
    - name: Cyclopropane phosphatidylethanolamine (dihexadec-9,10-cyclo-anoyl, 
        n-C16:0 cyclo)
    - compartment: c
    - charge: 0.0
    - formula: C39H74N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpe160_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: cgly_c
    - name: L-cysteinylglycine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C5H10N2O3S
    - annotation: !!omap
      - biggr: cgly_c:0
      - chebi:
        - CHEBI:61694
        - CHEBI:4047
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__phhlipa_c
    - name: Phospho-heptosyl-heptosyl-kdo2-lipidA
    - compartment: c
    - charge: -8.0
    - formula: C124H219N2O54P3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__phhlipa_c:-8
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__alpp_p
    - name: Applipoprotein
    - compartment: p
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__alpp_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__lpp_p
    - name: Lipoprotein
    - compartment: p
    - charge: 0.0
    - formula: XC16H30O1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__lpp_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: 5mtr_p
    - name: S-methyl-5-thio-D-ribofuranose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O4S
    - annotation: !!omap
      - biggr: 5mtr_p:0
      - chebi:
        - CHEBI:78440
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpe181_p
    - name: 1-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1)
    - compartment: p
    - charge: 0.0
    - formula: C23H46NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpe181_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: sf_c
    - name: 6-deoxy-6-sulfo-D-fructofuranose(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H11O8S
    - annotation: !!omap
      - biggr: sf_c:-1
      - chebi:
        - CHEBI:77133
      - sbo: SBO:0000247
  - !!omap
    - id: fuc__L_c
    - name: alpha-L-fucose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: fuc__L_c:0
      - chebi:
        - CHEBI:42548
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ghb_c
    - name: Gamma-hydroxybutyrate
    - compartment: c
    - charge: -1.0
    - formula: C4H7O3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ghb_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 4abutn_c
    - name: 4-ammoniobutanal
    - compartment: c
    - charge: 1.0
    - formula: C4H10NO
    - annotation: !!omap
      - biggr: 4abutn_c:1
      - chebi:
        - CHEBI:58264
      - sbo: SBO:0000247
  - !!omap
    - id: accoa_c
    - name: acetyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C23H34N7O17P3S
    - annotation: !!omap
      - biggr: accoa_c:-4
      - chebi:
        - CHEBI:57288
      - sbo: SBO:0000247
  - !!omap
    - id: arg__L_c
    - name: L-argininium(1+)
    - compartment: c
    - charge: 1.0
    - formula: C6H15N4O2
    - annotation: !!omap
      - biggr: arg__L_c:1
      - chebi:
        - CHEBI:32682
      - sbo: SBO:0000247
  - !!omap
    - id: LalaLglu_p
    - name: L-alanyl-L-glutamate(1-)
    - compartment: p
    - charge: -1.0
    - formula: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaLglu_p:-1
      - chebi:
        - CHEBI:61396
      - sbo: SBO:0000247
  - !!omap
    - id: 26dap_LL_c
    - name: (2S,6S)-2,6-diaminopimelic acid dizwitterion
    - compartment: c
    - charge: 0.0
    - formula: C7H14N2O4
    - annotation: !!omap
      - biggr: 26dap_LL_c:0
      - chebi:
        - CHEBI:57609
        - CHEBI:16026
      - sbo: SBO:0000247
  - !!omap
    - id: tmam_e
    - name: trimethylammonium
    - compartment: e
    - charge: 1.0
    - formula: C3H10N
    - annotation: !!omap
      - biggr: tmam_e:1
      - chebi:
        - CHEBI:58389
      - sbo: SBO:0000247
  - !!omap
    - id: mdhdhf_c
    - name: (2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
    - compartment: c
    - charge: 0.0
    - formula: C5H8O4
    - annotation: !!omap
      - biggr: mdhdhf_c:0
      - chebi:
        - CHEBI:71316
      - sbo: SBO:0000247
  - !!omap
    - id: octcoa_c
    - name: octanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H46N7O17P3S
    - annotation: !!omap
      - biggr: octcoa_c:-4
      - chebi:
        - CHEBI:57386
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__moadamp_c
    - name: MoaD Protein with bound AMP
    - compartment: c
    - charge: -1.0
    - formula: C11H12N5O8P1X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__moadamp_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: lyx__L_e
    - name: L-lyxopyranose
    - compartment: e
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: lyx__L_e:0
      - chebi:
        - CHEBI:62321
      - sbo: SBO:0000247
  - !!omap
    - id: mththf_p
    - name: (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol
    - compartment: p
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: mththf_p:0
      - chebi:
        - CHEBI:44800
      - sbo: SBO:0000247
  - !!omap
    - id: gtp_e
    - name: GTP(4-)
    - compartment: e
    - charge: -4.0
    - formula: C10H12N5O14P3
    - annotation: !!omap
      - biggr: gtp_e:-4
      - chebi:
        - CHEBI:37565
      - sbo: SBO:0000247
  - !!omap
    - id: 3hbz_c
    - name: 3-hydroxybenzoic acid
    - compartment: c
    - charge: 0.0
    - formula: C7H6O3
    - annotation: !!omap
      - biggr: 3hbz_c:0
      - chebi:
        - CHEBI:30764
      - sbo: SBO:0000247
  - !!omap
    - id: man6p_p
    - name: alpha-D-mannose 6-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: man6p_p:-2
      - chebi:
        - CHEBI:60332
      - sbo: SBO:0000247
  - !!omap
    - id: cellb_e
    - name: cellobiose
    - compartment: e
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: cellb_e:0
      - chebi:
        - CHEBI:17057
      - sbo: SBO:0000247
  - !!omap
    - id: prpmn_c
    - name: alpha-D-ribose 1-methylphosphonate 5-phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H11O10P2
    - annotation: !!omap
      - biggr: prpmn_c:-3
      - chebi:
        - CHEBI:68686
      - sbo: SBO:0000247
  - !!omap
    - id: uamr_c
    - name: UDP-N-acetyl-alpha-D-muramate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C20H28N3O19P2
    - annotation: !!omap
      - biggr: uamr_c:-3
      - chebi:
        - CHEBI:70757
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fecrm_un_c
    - name: Ferrichrome minus Fe(III)
    - compartment: c
    - charge: -3.0
    - formula: C27H42N9O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fecrm_un_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: asp__L_c
    - name: L-aspartate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C4H6NO4
    - annotation: !!omap
      - biggr: asp__L_c:-1
      - chebi:
        - CHEBI:29991
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__lipa_cold_p
    - name: Cold adapted KDO(2)-lipid (A)
    - compartment: p
    - charge: -6.0
    - formula: C114H202N2O39P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__lipa_cold_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: sbt__D_e
    - name: D-glucitol
    - compartment: e
    - charge: 0.0
    - formula: C6H14O6
    - annotation: !!omap
      - biggr: sbt__D_e:0
      - chebi:
        - CHEBI:17924
      - sbo: SBO:0000247
  - !!omap
    - id: acg5sa_c
    - name: 2-acetamido-5-oxopentanoate
    - compartment: c
    - charge: -1.0
    - formula: C7H10NO4
    - annotation: !!omap
      - biggr: acg5sa_c:-1
      - chebi:
        - CHEBI:29123
      - sbo: SBO:0000247
  - !!omap
    - id: arg__L_e
    - name: L-argininium(1+)
    - compartment: e
    - charge: 1.0
    - formula: C6H15N4O2
    - annotation: !!omap
      - biggr: arg__L_e:1
      - chebi:
        - CHEBI:32682
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein3p3p_p
    - name: Two linked disacharide tripeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C68H104N12O38
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein3p3p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hexACP_c
    - name: Hexanoyl-ACP (n-C6:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C17H31N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hexACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dgsn_e
    - name: 2'-deoxyguanosine
    - compartment: e
    - charge: 0.0
    - formula: C10H13N5O4
    - annotation: !!omap
      - biggr: dgsn_e:0
      - chebi:
        - CHEBI:17172
      - sbo: SBO:0000247
  - !!omap
    - id: spmd_e
    - name: spermidine(3+)
    - compartment: e
    - charge: 3.0
    - formula: C7H22N3
    - annotation: !!omap
      - biggr: spmd_e:3
      - chebi:
        - CHEBI:57834
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg161_c
    - name: Phosphatidylglycerol (dihexadec-9-enoyl, n-C16:1)
    - compartment: c
    - charge: -1.0
    - formula: C38H70O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg161_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: skm_c
    - name: shikimate
    - compartment: c
    - charge: -1.0
    - formula: C7H9O5
    - annotation: !!omap
      - biggr: skm_c:-1
      - chebi:
        - CHEBI:36208
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe120_p
    - name: Phosphatidylethanolamine (didodecanoyl, n-C12:0)
    - compartment: p
    - charge: 0.0
    - formula: C29H58N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe120_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: sucgsa_c
    - name: N-succinyl-L-glutamic 5-semialdehyde(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H11NO6
    - annotation: !!omap
      - biggr: sucgsa_c:-2
      - chebi:
        - CHEBI:58520
      - sbo: SBO:0000247
  - !!omap
    - id: imp_c
    - name: IMP(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H11N4O8P
    - annotation: !!omap
      - biggr: imp_c:-2
      - chebi:
        - CHEBI:58053
      - sbo: SBO:0000247
  - !!omap
    - id: tartr__L_c
    - name: L-tartrate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H4O6
    - annotation: !!omap
      - biggr: tartr__L_c:-2
      - chebi:
        - CHEBI:30924
      - sbo: SBO:0000247
  - !!omap
    - id: ppal_p
    - name: propanal
    - compartment: p
    - charge: 0.0
    - formula: C3H6O
    - annotation: !!omap
      - biggr: ppal_p:0
      - chebi:
        - CHEBI:17153
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__colipap_p
    - name: Core oligosaccharide lipid A diphosphate
    - compartment: p
    - charge: -12.0
    - formula: C176H303N2O103P5
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__colipap_p:-12
      - sbo: SBO:0000247
  - !!omap
    - id: o2_c
    - name: dioxygen
    - compartment: c
    - charge: 0.0
    - formula: O2
    - annotation: !!omap
      - biggr: o2_c:0
      - chebi:
        - CHEBI:15379
      - sbo: SBO:0000247
  - !!omap
    - id: dhps_p
    - name: 3-sulfopropanediol(1-)
    - compartment: p
    - charge: -1.0
    - formula: C3H7O5S
    - annotation: !!omap
      - biggr: dhps_p:-1
      - chebi:
        - CHEBI:77138
      - sbo: SBO:0000247
  - !!omap
    - id: ocdcea_c
    - name: oleate
    - compartment: c
    - charge: -1.0
    - formula: C18H33O2
    - annotation: !!omap
      - biggr: ocdcea_c:-1
      - chebi:
        - CHEBI:30823
      - sbo: SBO:0000247
  - !!omap
    - id: h_p
    - name: hydron
    - compartment: p
    - charge: 1.0
    - formula: H
    - annotation: !!omap
      - biggr: h_p:1
      - chebi:
        - CHEBI:15378
      - sbo: SBO:0000247
  - !!omap
    - id: 3hbcoa_c
    - name: (S)-3-hydroxybutanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C25H38N7O18P3S
    - annotation: !!omap
      - biggr: 3hbcoa_c:-4
      - chebi:
        - CHEBI:57316
      - sbo: SBO:0000247
  - !!omap
    - id: succ_p
    - name: succinate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H4O4
    - annotation: !!omap
      - biggr: succ_p:-2
      - chebi:
        - CHEBI:30031
      - sbo: SBO:0000247
  - !!omap
    - id: gal_p
    - name: alpha-D-galactose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: gal_p:0
      - chebi:
        - CHEBI:28061
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2hptcl_c
    - name: 2-hydroxycyclohepta-1,4,6-triene-1-carboxylate
    - compartment: c
    - charge: -1.0
    - formula: C8H7O3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2hptcl_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: phpyr_c
    - name: keto-phenylpyruvate
    - compartment: c
    - charge: -1.0
    - formula: C9H7O3
    - annotation: !!omap
      - biggr: phpyr_c:-1
      - chebi:
        - CHEBI:18005
        - CHEBI:16815
      - sbo: SBO:0000247
  - !!omap
    - id: s17bp_c
    - name: sedoheptulose 1,7-bisphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C7H12O13P2
    - annotation: !!omap
      - biggr: s17bp_c:-4
      - chebi:
        - CHEBI:58335
      - sbo: SBO:0000247
  - !!omap
    - id: 4ampm_c
    - name: 4-amino-2-methyl-5-phosphonatooxymethylpyrimidine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H8N3O4P
    - annotation: !!omap
      - biggr: 4ampm_c:-2
      - chebi:
        - CHEBI:58354
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__maltttr_p
    - name: Maltotetraose
    - compartment: p
    - charge: 0.0
    - formula: C24H42O21
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__maltttr_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: pydxn_c
    - name: pyridoxine
    - compartment: c
    - charge: 0.0
    - formula: C8H11NO3
    - annotation: !!omap
      - biggr: pydxn_c:0
      - chebi:
        - CHEBI:16709
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__met__D_c
    - name: D-Methionine
    - compartment: c
    - charge: 0.0
    - formula: C5H10NO2S
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__met__D_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: fru_e
    - name: beta-D-fructofuranose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: fru_e:0
      - chebi:
        - CHEBI:28645
      - sbo: SBO:0000247
  - !!omap
    - id: sucorn_c
    - name: N(2)-succinyl-L-ornithinate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C9H15N2O5
    - annotation: !!omap
      - biggr: sucorn_c:-1
      - chebi:
        - CHEBI:58514
      - sbo: SBO:0000247
  - !!omap
    - id: pyr_e
    - name: pyruvate
    - compartment: e
    - charge: -1.0
    - formula: C3H3O3
    - annotation: !!omap
      - biggr: pyr_e:-1
      - chebi:
        - CHEBI:15361
      - sbo: SBO:0000247
  - !!omap
    - id: dtmp_p
    - name: dTMP(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H13N2O8P
    - annotation: !!omap
      - biggr: dtmp_p:-2
      - chebi:
        - CHEBI:63528
      - sbo: SBO:0000247
  - !!omap
    - id: 34dhcinm_c
    - name: trans-caffeate
    - compartment: c
    - charge: -1.0
    - formula: C9H7O4
    - annotation: !!omap
      - biggr: 34dhcinm_c:-1
      - chebi:
        - CHEBI:57770
      - sbo: SBO:0000247
  - !!omap
    - id: arsna_c
    - name: arsenate(3-)
    - compartment: c
    - charge: -3.0
    - formula: AsO4
    - annotation: !!omap
      - biggr: arsna_c:-3
      - chebi:
        - CHEBI:29125
      - sbo: SBO:0000247
  - !!omap
    - id: acgal_p
    - name: N-acetyl-alpha-D-galactosamine
    - compartment: p
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acgal_p:0
      - chebi:
        - CHEBI:40356
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dtdp4addg_c
    - name: DTDP-4-amino-4,6-dideoxy-D-galactose
    - compartment: c
    - charge: -1.0
    - formula: C16H26N3O14P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dtdp4addg_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: unagamuf_c
    - name: alpha-D-FucNAc4-(1->4)-beta-D-ManNAcA-(1->4)-D-GlcNAc-undecaprenyl 
        diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C79H126N3O22P2
    - annotation: !!omap
      - biggr: unagamuf_c:-3
      - chebi:
        - CHEBI:61496
      - sbo: SBO:0000247
  - !!omap
    - id: idon__L_c
    - name: L-idonate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: idon__L_c:-1
      - chebi:
        - CHEBI:17796
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malttr_e
    - name: Maltotriose C18H32O16
    - compartment: e
    - charge: 0.0
    - formula: C18H32O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malttr_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: cys__D_e
    - name: D-cysteine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__D_e:0
      - chebi:
        - CHEBI:35236
        - CHEBI:16375
      - sbo: SBO:0000247
  - !!omap
    - id: pac_c
    - name: phenylacetate
    - compartment: c
    - charge: -1.0
    - formula: C8H7O2
    - annotation: !!omap
      - biggr: pac_c:-1
      - chebi:
        - CHEBI:18401
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp160_p
    - name: Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)
    - compartment: p
    - charge: -3.0
    - formula: C38H73O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp160_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: cbm_c
    - name: carbamate
    - compartment: c
    - charge: -1.0
    - formula: CH2NO2
    - annotation: !!omap
      - biggr: cbm_c:-1
      - chebi:
        - CHEBI:13941
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__5mthf_c
    - name: 5-Methyltetrahydrofolate
    - compartment: c
    - charge: -1.0
    - formula: C20H24N7O6
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__5mthf_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 3hpppn_e
    - name: 3-(3-hydroxyphenyl)propanoate
    - compartment: e
    - charge: -1.0
    - formula: C9H9O3
    - annotation: !!omap
      - biggr: 3hpppn_e:-1
      - chebi:
        - CHEBI:57277
      - sbo: SBO:0000247
  - !!omap
    - id: ppt_e
    - name: hydrogenphosphite
    - compartment: e
    - charge: -2.0
    - formula: HO3P
    - annotation: !!omap
      - biggr: ppt_e:-2
      - chebi:
        - CHEBI:16215
        - CHEBI:29259
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pmeACP_c
    - name: Pimeloyl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C19H33N2O10PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ctbt_c
    - name: (E)-4-(trimethylammonio)but-2-enoate
    - compartment: c
    - charge: 0.0
    - formula: C7H13NO2
    - annotation: !!omap
      - biggr: ctbt_c:0
      - chebi:
        - CHEBI:17237
      - sbo: SBO:0000247
  - !!omap
    - id: nad_c
    - name: NAD(1-)
    - compartment: c
    - charge: -1.0
    - formula: C21H26N7O14P2
    - annotation: !!omap
      - biggr: nad_c:-1
      - chebi:
        - CHEBI:57540
      - sbo: SBO:0000247
  - !!omap
    - id: na1_p
    - name: sodium(1+)
    - compartment: p
    - charge: 1.0
    - formula: Na
    - annotation: !!omap
      - biggr: na1_p:1
      - chebi:
        - CHEBI:29101
      - sbo: SBO:0000247
  - !!omap
    - id: glyald_p
    - name: D-glyceraldehyde
    - compartment: p
    - charge: 0.0
    - formula: C3H6O3
    - annotation: !!omap
      - biggr: glyald_p:0
      - chebi:
        - CHEBI:17378
      - sbo: SBO:0000247
  - !!omap
    - id: r1p_c
    - name: alpha-D-ribose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: r1p_c:-2
      - chebi:
        - CHEBI:57720
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tdeACP_c
    - name: Cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)
    - compartment: c
    - charge: -1.0
    - formula: C25H45N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tdeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 5mta_c
    - name: 5'-S-methyl-5'-thioadenosine
    - compartment: c
    - charge: 0.0
    - formula: C11H15N5O3S
    - annotation: !!omap
      - biggr: 5mta_c:0
      - chebi:
        - CHEBI:17509
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhba_c
    - name: 2,3-dihydroxybenzoyl 5'-adenylate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C17H17N5O10P
    - annotation: !!omap
      - biggr: 23dhba_c:-1
      - chebi:
        - CHEBI:57417
      - sbo: SBO:0000247
  - !!omap
    - id: val__L_e
    - name: L-valine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C5H11NO2
    - annotation: !!omap
      - biggr: val__L_e:0
      - chebi:
        - CHEBI:57762
        - CHEBI:16414
      - sbo: SBO:0000247
  - !!omap
    - id: ddcacoa_c
    - name: lauroyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C33H54N7O17P3S
    - annotation: !!omap
      - biggr: ddcacoa_c:-4
      - chebi:
        - CHEBI:57375
      - sbo: SBO:0000247
  - !!omap
    - id: gdpofuc_c:-2
    - name: GDP-4-dehydro-6-deoxy-alpha-D-mannose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H21N5O15P2
    - annotation: !!omap
      - biggr: gdpofuc_c:-2
      - chebi:
        - CHEBI:57964
      - sbo: SBO:0000247
  - !!omap
    - id: rbl__D_c
    - name: D-ribulose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: rbl__D_c:0
      - chebi:
        - CHEBI:17173
      - sbo: SBO:0000247
  - !!omap
    - id: chol_c
    - name: choline
    - compartment: c
    - charge: 1.0
    - formula: C5H14NO
    - annotation: !!omap
      - biggr: chol_c:1
      - chebi:
        - CHEBI:15354
      - sbo: SBO:0000247
  - !!omap
    - id: his__L_p
    - name: L-histidine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C6H9N3O2
    - annotation: !!omap
      - biggr: his__L_p:0
      - chebi:
        - CHEBI:57595
        - CHEBI:15971
      - sbo: SBO:0000247
  - !!omap
    - id: malt_c
    - name: maltose
    - compartment: c
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: malt_c:0
      - chebi:
        - CHEBI:17306
      - sbo: SBO:0000247
  - !!omap
    - id: hom__L_e
    - name: L-homoserine
    - compartment: e
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: hom__L_e:0
      - chebi:
        - CHEBI:57476
        - CHEBI:15699
      - sbo: SBO:0000247
  - !!omap
    - id: no2_p
    - name: nitrite
    - compartment: p
    - charge: -1.0
    - formula: NO2
    - annotation: !!omap
      - biggr: no2_p:-1
      - chebi:
        - CHEBI:16301
      - sbo: SBO:0000247
  - !!omap
    - id: dcmp_e
    - name: 2'-deoxycytosine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H12N3O7P
    - annotation: !!omap
      - biggr: dcmp_e:-2
      - chebi:
        - CHEBI:57566
      - sbo: SBO:0000247
  - !!omap
    - id: dgmp_e
    - name: 2'-deoxyguanosine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: dgmp_e:-2
      - chebi:
        - CHEBI:57673
      - sbo: SBO:0000247
  - !!omap
    - id: rhcys_c
    - name: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine
    - compartment: c
    - charge: 0.0
    - formula: C9H17NO6S
    - annotation: !!omap
      - biggr: rhcys_c:0
      - chebi:
        - CHEBI:58195
        - CHEBI:17575
      - sbo: SBO:0000247
  - !!omap
    - id: cd2_e
    - name: cadmium(2+)
    - compartment: e
    - charge: 2.0
    - formula: Cd
    - annotation: !!omap
      - biggr: cd2_e:2
      - chebi:
        - CHEBI:48775
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__met__D_e
    - name: D-Methionine
    - compartment: e
    - charge: 0.0
    - formula: C5H10NO2S
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__met__D_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: gbbtn_c
    - name: 4-(trimethylammonio)butanoate
    - compartment: c
    - charge: 0.0
    - formula: C7H15NO2
    - annotation: !!omap
      - biggr: gbbtn_c:0
      - chebi:
        - CHEBI:16244
      - sbo: SBO:0000247
  - !!omap
    - id: fald_c
    - name: formaldehyde
    - compartment: c
    - charge: 0.0
    - formula: CH2O
    - annotation: !!omap
      - biggr: fald_c:0
      - chebi:
        - CHEBI:16842
      - sbo: SBO:0000247
  - !!omap
    - id: Nmtrp_c
    - name: 3-(1H-indol-3-yl)-2-(methylamino)propanoic acid
    - compartment: c
    - charge: 0.0
    - formula: C12H14N2O2
    - annotation: !!omap
      - biggr: Nmtrp_c:0
      - chebi:
        - CHEBI:93824
      - sbo: SBO:0000247
  - !!omap
    - id: 23ccmp_e
    - name: 2',3'-cyclic CMP(1-)
    - compartment: e
    - charge: -1.0
    - formula: C9H11N3O7P
    - annotation: !!omap
      - biggr: 23ccmp_e:-1
      - chebi:
        - CHEBI:60877
      - sbo: SBO:0000247
  - !!omap
    - id: dmso_e
    - name: dimethyl sulfoxide
    - compartment: e
    - charge: 0.0
    - formula: C2H6OS
    - annotation: !!omap
      - biggr: dmso_e:0
      - chebi:
        - CHEBI:28262
      - sbo: SBO:0000247
  - !!omap
    - id: udpg_e
    - name: UDP-alpha-D-glucose(2-)
    - compartment: e
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpg_e:-2
      - chebi:
        - CHEBI:58885
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__icolipa_c
    - name: Inner core oligosaccharide lipid A (E coli)
    - compartment: c
    - charge: -11.0
    - formula: C145H251N2O74P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__icolipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: acgal_e
    - name: N-acetyl-alpha-D-galactosamine
    - compartment: e
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acgal_e:0
      - chebi:
        - CHEBI:40356
      - sbo: SBO:0000247
  - !!omap
    - id: r15bp_c
    - name: alpha-D-ribose 1,5-bisphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C5H8O11P2
    - annotation: !!omap
      - biggr: r15bp_c:-4
      - chebi:
        - CHEBI:68688
      - sbo: SBO:0000247
  - !!omap
    - id: g3pe_p
    - name: glycerophosphatidylethanolamine
    - compartment: p
    - charge: 0.0
    - formula: C5H14NO6P
    - annotation: !!omap
      - biggr: g3pe_p:0
      - chebi:
        - CHEBI:52330
      - sbo: SBO:0000247
  - !!omap
    - id: crn__D_p
    - name: (S)-carnitine
    - compartment: p
    - charge: 0.0
    - formula: C7H15NO3
    - annotation: !!omap
      - biggr: crn__D_p:0
      - chebi:
        - CHEBI:11060
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ocvac11eACP_c
    - name: 3-oxo-cis-vacc-11-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C29H51N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ocvac11eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cd2_p
    - name: cadmium(2+)
    - compartment: p
    - charge: 2.0
    - formula: Cd
    - annotation: !!omap
      - biggr: cd2_p:2
      - chebi:
        - CHEBI:48775
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hoctaACP_c
    - name: (R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C29H55N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hoctaACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe181_p
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1)
    - compartment: p
    - charge: 0.0
    - formula: C23H46NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe181_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: arab__D_c
    - name: D-arabinopyranose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: arab__D_c:0
      - chebi:
        - CHEBI:46994
      - sbo: SBO:0000247
  - !!omap
    - id: 2doxg6p_c
    - name: 2-deoxy-D-glucopyranose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O8P
    - annotation: !!omap
      - biggr: 2doxg6p_c:-2
      - chebi:
        - CHEBI:84760
      - sbo: SBO:0000247
  - !!omap
    - id: ocdca_c
    - name: octadecanoate
    - compartment: c
    - charge: -1.0
    - formula: C18H35O2
    - annotation: !!omap
      - biggr: ocdca_c:-1
      - chebi:
        - CHEBI:25629
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein4px4p4p_p
    - name: Three disacharide linked murein units (tetrapeptide crosslinked 
        tetrapeptide (A2pm->D-ala), one uncrosslinked tetrapaptide) (middle of 
        chain)
    - compartment: p
    - charge: -6.0
    - formula: C111H169N21O59
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein4px4p4p_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg180_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0)
    - compartment: c
    - charge: -1.0
    - formula: C24H48O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg180_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2tdec7eg3p_p
    - name: 2-tetradec-7-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C17H32O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2tdec7eg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: sulfac_c
    - name: sulfonatoacetate
    - compartment: c
    - charge: -2.0
    - formula: C2H2O5S
    - annotation: !!omap
      - biggr: sulfac_c:-2
      - chebi:
        - CHEBI:58824
      - sbo: SBO:0000247
  - !!omap
    - id: mg2_c
    - name: magnesium(2+)
    - compartment: c
    - charge: 2.0
    - formula: Mg
    - annotation: !!omap
      - biggr: mg2_c:2
      - chebi:
        - CHEBI:18420
      - sbo: SBO:0000247
  - !!omap
    - id: dt5hsu_c
    - name: 5-dehydro-4-deoxy-D-glucuronate
    - compartment: c
    - charge: -1.0
    - formula: C6H7O6
    - annotation: !!omap
      - biggr: dt5hsu_c:-1
      - chebi:
        - CHEBI:17117
      - sbo: SBO:0000247
  - !!omap
    - id: acmalt_c
    - name: 1-O-acetylmaltose
    - compartment: c
    - charge: 0.0
    - formula: C14H24O12
    - annotation: !!omap
      - biggr: acmalt_c:0
      - chebi:
        - CHEBI:13714
      - sbo: SBO:0000247
  - !!omap
    - id: malcoame_c
    - name: malonyl-CoA methyl ester(4-)
    - compartment: c
    - charge: -4.0
    - formula: C25H36N7O19P3S
    - annotation: !!omap
      - biggr: malcoame_c:-4
      - chebi:
        - CHEBI:71242
      - sbo: SBO:0000247
  - !!omap
    - id: slnt_p
    - name: selenite(2-)
    - compartment: p
    - charge: -2.0
    - formula: O3Se
    - annotation: !!omap
      - biggr: slnt_p:-2
      - chebi:
        - CHEBI:18212
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__gmeACP_c
    - name: Glutaryl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C17H29N2O10PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__gmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 1hdecg3p_c
    - name: 1-palmitoyl-sn-glycerol 3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C19H37O7P
    - annotation: !!omap
      - biggr: 1hdecg3p_c:-2
      - chebi:
        - CHEBI:57518
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hgmeACP_c
    - name: 3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C17H29N2O11PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hgmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg141_p
    - name: Phosphatidylglycerol (ditetradec-7-enoyl, n-C14:1)
    - compartment: p
    - charge: -1.0
    - formula: C34H62O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg141_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__mpt_c
    - name: Molybdopterin
    - compartment: c
    - charge: -2.0
    - formula: C10H10N5O6PS2Cu
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__mpt_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: ttrcyc_p
    - name: tetracycline zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C22H24N2O8
    - annotation: !!omap
      - biggr: ttrcyc_p:0
      - chebi:
        - CHEBI:77932
        - CHEBI:27902
      - sbo: SBO:0000247
  - !!omap
    - id: pcresol_c
    - name: p-cresol
    - compartment: c
    - charge: 0.0
    - formula: C7H8O
    - annotation: !!omap
      - biggr: pcresol_c:0
      - chebi:
        - CHEBI:17847
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg181_c
    - name: Acyl phosphatidylglycerol (n-C18:1)
    - compartment: c
    - charge: -1.0
    - formula: C60H110O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg181_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pydx_p
    - name: pyridoxal
    - compartment: p
    - charge: 0.0
    - formula: C8H9NO3
    - annotation: !!omap
      - biggr: pydx_p:0
      - chebi:
        - CHEBI:17310
      - sbo: SBO:0000247
  - !!omap
    - id: 2sephchc_c
    - name: 
        (1R,2S,5S,6S)-2-(3-carboxylatopropanoyl)-5-[(1-carboxylatovinyl)oxy]-6-hydroxycyclohex-3-ene-1-carboxylate
    - compartment: c
    - charge: -3.0
    - formula: C14H13O9
    - annotation: !!omap
      - biggr: 2sephchc_c:-3
      - chebi:
        - CHEBI:58818
      - sbo: SBO:0000247
  - !!omap
    - id: cellb_p
    - name: cellobiose
    - compartment: p
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: cellb_p:0
      - chebi:
        - CHEBI:17057
      - sbo: SBO:0000247
  - !!omap
    - id: adp_c
    - name: ADP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H12N5O10P2
    - annotation: !!omap
      - biggr: adp_c:-3
      - chebi:
        - CHEBI:456216
      - sbo: SBO:0000247
  - !!omap
    - id: dhps_c
    - name: 3-sulfopropanediol(1-)
    - compartment: c
    - charge: -1.0
    - formula: C3H7O5S
    - annotation: !!omap
      - biggr: dhps_c:-1
      - chebi:
        - CHEBI:77138
      - sbo: SBO:0000247
  - !!omap
    - id: mal__L_c
    - name: (S)-malate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H4O5
    - annotation: !!omap
      - biggr: mal__L_c:-2
      - chebi:
        - CHEBI:15589
      - sbo: SBO:0000247
  - !!omap
    - id: urea_c
    - name: carbamimidic acid
    - compartment: c
    - charge: 0.0
    - formula: CH4N2O
    - annotation: !!omap
      - biggr: urea_c:0
      - chebi:
        - CHEBI:16199
        - CHEBI:48376
      - sbo: SBO:0000247
  - !!omap
    - id: gam_c
    - name: 2-ammonio-2-deoxy-D-glucopyranose
    - compartment: c
    - charge: 1.0
    - formula: C6H14NO5
    - annotation: !!omap
      - biggr: gam_c:1
      - chebi:
        - CHEBI:58723
      - sbo: SBO:0000247
  - !!omap
    - id: mercpeth_c
    - name: mercaptoethanol
    - compartment: c
    - charge: 0.0
    - formula: C2H6OS
    - annotation: !!omap
      - biggr: mercpeth_c:0
      - chebi:
        - CHEBI:41218
      - sbo: SBO:0000247
  - !!omap
    - id: psuri_p
    - name: pseudouridine
    - compartment: p
    - charge: 0.0
    - formula: C9H12N2O6
    - annotation: !!omap
      - biggr: psuri_p:0
      - chebi:
        - CHEBI:17802
      - sbo: SBO:0000247
  - !!omap
    - id: 5apru_c
    - name: 5-amino-6-(5-phospho-D-ribosylamino)uracil(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H13N4O9P
    - annotation: !!omap
      - biggr: 5apru_c:-2
      - chebi:
        - CHEBI:58453
      - sbo: SBO:0000247
  - !!omap
    - id: g3p_c
    - name: glyceraldehyde 3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H5O6P
    - annotation: !!omap
      - biggr: g3p_c:-2
      - chebi:
        - CHEBI:58027
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__puacgam_p
    - name: Poly-?-1,6-N-acetyl-D-glucosamine
    - compartment: p
    - charge: 1.0
    - formula: C8N1O5H14R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__puacgam_p:1
      - sbo: SBO:0000247
  - !!omap
    - id: etoh_c
    - name: ethanol
    - compartment: c
    - charge: 0.0
    - formula: C2H6O
    - annotation: !!omap
      - biggr: etoh_c:0
      - chebi:
        - CHEBI:16236
      - sbo: SBO:0000247
  - !!omap
    - id: pnto__R_c
    - name: (R)-pantothenate
    - compartment: c
    - charge: -1.0
    - formula: C9H16NO5
    - annotation: !!omap
      - biggr: pnto__R_c:-1
      - chebi:
        - CHEBI:29032
      - sbo: SBO:0000247
  - !!omap
    - id: nadphx__S_c
    - name: (S)-NADPHX(4-)
    - compartment: c
    - charge: -4.0
    - formula: C21H28N7O18P3
    - annotation: !!omap
      - biggr: nadphx__S_c:-4
      - chebi:
        - CHEBI:64076
      - sbo: SBO:0000247
  - !!omap
    - id: gdptp_c
    - name: guanosine 3'-diphosphate 5'-triphosphate(7-)
    - compartment: c
    - charge: -7.0
    - formula: C10H11N5O20P5
    - annotation: !!omap
      - biggr: gdptp_c:-7
      - chebi:
        - CHEBI:71477
      - sbo: SBO:0000247
  - !!omap
    - id: 3hddcoa_c
    - name: (S)-3-hydroxylauroyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C33H54N7O18P3S
    - annotation: !!omap
      - biggr: 3hddcoa_c:-4
      - chebi:
        - CHEBI:62558
      - sbo: SBO:0000247
  - !!omap
    - id: so3_c
    - name: sulfite
    - compartment: c
    - charge: -2.0
    - formula: O3S
    - annotation: !!omap
      - biggr: so3_c:-2
      - chebi:
        - CHEBI:17359
      - sbo: SBO:0000247
  - !!omap
    - id: met__L_c
    - name: L-methionine
    - compartment: c
    - charge: 0.0
    - formula: C5H11NO2S
    - annotation: !!omap
      - biggr: met__L_c:0
      - chebi:
        - CHEBI:57844
        - CHEBI:16643
      - sbo: SBO:0000247
  - !!omap
    - id: aicar_c
    - name: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H13N4O8P
    - annotation: !!omap
      - biggr: aicar_c:-2
      - chebi:
        - CHEBI:58475
      - sbo: SBO:0000247
  - !!omap
    - id: altrn_c
    - name: D-altronate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: altrn_c:-1
      - chebi:
        - CHEBI:17360
      - sbo: SBO:0000247
  - !!omap
    - id: thymd_e
    - name: thymidine
    - compartment: e
    - charge: 0.0
    - formula: C10H14N2O5
    - annotation: !!omap
      - biggr: thymd_e:0
      - chebi:
        - CHEBI:17748
      - sbo: SBO:0000247
  - !!omap
    - id: ncam_c
    - name: nicotinamide
    - compartment: c
    - charge: 0.0
    - formula: C6H6N2O
    - annotation: !!omap
      - biggr: ncam_c:0
      - chebi:
        - CHEBI:17154
      - sbo: SBO:0000247
  - !!omap
    - id: 5aizc_c
    - name: 5-amino-1-(5-phosphonato-D-ribosyl)imidazole-4-carboxylate
    - compartment: c
    - charge: -3.0
    - formula: C9H11N3O9P
    - annotation: !!omap
      - biggr: 5aizc_c:-3
      - chebi:
        - CHEBI:58564
      - sbo: SBO:0000247
  - !!omap
    - id: fruur_c
    - name: D-fructofuranuronate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: fruur_c:-1
      - chebi:
        - CHEBI:59863
      - sbo: SBO:0000247
  - !!omap
    - id: sucbz_c
    - name: 2-succinatobenzoate
    - compartment: c
    - charge: -2.0
    - formula: C11H8O5
    - annotation: !!omap
      - biggr: sucbz_c:-2
      - chebi:
        - CHEBI:18325
      - sbo: SBO:0000247
  - !!omap
    - id: ac_e
    - name: acetate
    - compartment: e
    - charge: -1.0
    - formula: C2H3O2
    - annotation: !!omap
      - biggr: ac_e:-1
      - chebi:
        - CHEBI:30089
      - sbo: SBO:0000247
  - !!omap
    - id: glx_c
    - name: glyoxylate
    - compartment: c
    - charge: -1.0
    - formula: C2HO3
    - annotation: !!omap
      - biggr: glx_c:-1
      - chebi:
        - CHEBI:36655
      - sbo: SBO:0000247
  - !!omap
    - id: k_e
    - name: potassium(1+)
    - compartment: e
    - charge: 1.0
    - formula: K
    - annotation: !!omap
      - biggr: k_e:1
      - chebi:
        - CHEBI:29103
      - sbo: SBO:0000247
  - !!omap
    - id: lipidX_c
    - name: lipid X(2-)
    - compartment: c
    - charge: -2.0
    - formula: C34H64NO12P
    - annotation: !!omap
      - biggr: lipidX_c:-2
      - chebi:
        - CHEBI:57957
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg140_c
    - name: Acyl phosphatidylglycerol (n-C14:0)
    - compartment: c
    - charge: -1.0
    - formula: C48H92O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg140_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dhna_c
    - name: 1,4-dihydroxy-2-naphthoate
    - compartment: c
    - charge: -1.0
    - formula: C11H7O4
    - annotation: !!omap
      - biggr: dhna_c:-1
      - chebi:
        - CHEBI:11173
      - sbo: SBO:0000247
  - !!omap
    - id: etoh_e
    - name: ethanol
    - compartment: e
    - charge: 0.0
    - formula: C2H6O
    - annotation: !!omap
      - biggr: etoh_e:0
      - chebi:
        - CHEBI:16236
      - sbo: SBO:0000247
  - !!omap
    - id: galctn__L_c
    - name: L-galactonate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: galctn__L_c:-1
      - chebi:
        - CHEBI:53071
      - sbo: SBO:0000247
  - !!omap
    - id: mi1p__D_c
    - name: 1D-myo-inositol 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: mi1p__D_c:-2
      - chebi:
        - CHEBI:58433
      - sbo: SBO:0000247
  - !!omap
    - id: pro__L_e
    - name: L-proline
    - compartment: e
    - charge: 0.0
    - formula: C5H9NO2
    - annotation: !!omap
      - biggr: pro__L_e:0
      - chebi:
        - CHEBI:60039
        - CHEBI:17203
      - sbo: SBO:0000247
  - !!omap
    - id: taur_e
    - name: taurine
    - compartment: e
    - charge: 0.0
    - formula: C2H7NO3S
    - annotation: !!omap
      - biggr: taur_e:0
      - chebi:
        - CHEBI:507393
        - CHEBI:15891
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__lipa_cold_e
    - name: Cold adapted KDO(2)-lipid (A)
    - compartment: e
    - charge: -6.0
    - formula: C114H202N2O39P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__lipa_cold_e:-6
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bwcogdp_c
    - name: Tungsten bispterin cofactor guanine dinucleotide
    - compartment: c
    - charge: -4.0
    - formula: C40H44N20O27P4S4W
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bwcogdp_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: ppp9_c
    - name: protoporphyrinate
    - compartment: c
    - charge: -2.0
    - formula: C34H32N4O4
    - annotation: !!omap
      - biggr: ppp9_c:-2
      - chebi:
        - CHEBI:57306
        - CHEBI:36159
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__thptdn_c
    - name: 5,6,7,8-tetrahydropteridine
    - compartment: c
    - charge: 2.0
    - formula: C6H10N4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__thptdn_c:2
      - sbo: SBO:0000247
  - !!omap
    - id: glcn_p
    - name: D-gluconate
    - compartment: p
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: glcn_p:-1
      - chebi:
        - CHEBI:18391
      - sbo: SBO:0000247
  - !!omap
    - id: gua_p
    - name: guanine
    - compartment: p
    - charge: 0.0
    - formula: C5H5N5O
    - annotation: !!omap
      - biggr: gua_p:0
      - chebi:
        - CHEBI:16235
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__air_c
    - name: 5-amino-1-(5-phospho-D-ribosyl)imidazole
    - compartment: c
    - charge: -2.0
    - formula: C8H12N3O7P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__air_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 6pgc_c
    - name: 6-phosphonatooxy-D-gluconate
    - compartment: c
    - charge: -3.0
    - formula: C6H10O10P
    - annotation: !!omap
      - biggr: 6pgc_c:-3
      - chebi:
        - CHEBI:58759
      - sbo: SBO:0000247
  - !!omap
    - id: 2ahhmd_c
    - name: (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C7H8N5O8P2
    - annotation: !!omap
      - biggr: 2ahhmd_c:-3
      - chebi:
        - CHEBI:72950
        - CHEBI:57602
      - sbo: SBO:0000247
  - !!omap
    - id: udpgal_c
    - name: UDP-alpha-D-galactose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpgal_c:-2
      - chebi:
        - CHEBI:66914
      - sbo: SBO:0000247
  - !!omap
    - id: nh4_c
    - name: ammonium
    - compartment: c
    - charge: 1.0
    - formula: H4N
    - annotation: !!omap
      - biggr: nh4_c:1
      - chebi:
        - CHEBI:28938
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3hox_un_p
    - name: Fe(III)hydoxamate, unloaded
    - compartment: p
    - charge: -3.0
    - formula: C9H18O6N3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3hox_un_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: xmp_e
    - name: 5'-xanthylate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H11N4O9P
    - annotation: !!omap
      - biggr: xmp_e:-2
      - chebi:
        - CHEBI:57464
      - sbo: SBO:0000247
  - !!omap
    - id: pydam_c
    - name: pyridoxaminium(1+)
    - compartment: c
    - charge: 1.0
    - formula: C8H13N2O2
    - annotation: !!omap
      - biggr: pydam_c:1
      - chebi:
        - CHEBI:57761
      - sbo: SBO:0000247
  - !!omap
    - id: so3_p
    - name: sulfite
    - compartment: p
    - charge: -2.0
    - formula: O3S
    - annotation: !!omap
      - biggr: so3_p:-2
      - chebi:
        - CHEBI:17359
      - sbo: SBO:0000247
  - !!omap
    - id: rml1p_c
    - name: L-rhamnulose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O8P
    - annotation: !!omap
      - biggr: rml1p_c:-2
      - chebi:
        - CHEBI:58313
      - sbo: SBO:0000247
  - !!omap
    - id: gam6p_e
    - name: alpha-D-glucosamine 6-phosphate(1-)
    - compartment: e
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: gam6p_e:-1
      - chebi:
        - CHEBI:75989
      - sbo: SBO:0000247
  - !!omap
    - id: cytd_c
    - name: cytidine
    - compartment: c
    - charge: 0.0
    - formula: C9H13N3O5
    - annotation: !!omap
      - biggr: cytd_c:0
      - chebi:
        - CHEBI:17562
      - sbo: SBO:0000247
  - !!omap
    - id: glcur1p_e
    - name: 1-phosphonato-alpha-D-glucuronate(3-)
    - compartment: e
    - charge: -3.0
    - formula: C6H8O10P
    - annotation: !!omap
      - biggr: glcur1p_e:-3
      - chebi:
        - CHEBI:57897
      - sbo: SBO:0000247
  - !!omap
    - id: nac_e
    - name: nicotinate
    - compartment: e
    - charge: -1.0
    - formula: C6H4NO2
    - annotation: !!omap
      - biggr: nac_e:-1
      - chebi:
        - CHEBI:32544
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tdec2eACP_c
    - name: Trans-Dec-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C21H37N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tdec2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: thym_c
    - name: thymine
    - compartment: c
    - charge: 0.0
    - formula: C5H6N2O2
    - annotation: !!omap
      - biggr: thym_c:0
      - chebi:
        - CHEBI:17821
      - sbo: SBO:0000247
  - !!omap
    - id: galctn__D_c
    - name: D-galactonate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: galctn__D_c:-1
      - chebi:
        - CHEBI:12931
      - sbo: SBO:0000247
  - !!omap
    - id: sbzcoa_c
    - name: 4-(2-carboxyphenyl)-4-oxobutanoyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C32H39N7O20P3S
    - annotation: !!omap
      - biggr: sbzcoa_c:-5
      - chebi:
        - CHEBI:57364
      - sbo: SBO:0000247
  - !!omap
    - id: gal_e
    - name: alpha-D-galactose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: gal_e:0
      - chebi:
        - CHEBI:28061
      - sbo: SBO:0000247
  - !!omap
    - id: 3hpp_p
    - name: 3-hydroxypropionate
    - compartment: p
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: 3hpp_p:-1
      - chebi:
        - CHEBI:16510
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pimACP_c
    - name: Pimeloyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C18H31N2O10PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pimACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: micit_c
    - name: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate
    - compartment: c
    - charge: -3.0
    - formula: C7H7O7
    - annotation: !!omap
      - biggr: micit_c:-3
      - chebi:
        - CHEBI:57429
      - sbo: SBO:0000247
  - !!omap
    - id: dhcholn_c
    - name: 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanate
    - compartment: c
    - charge: -1.0
    - formula: C24H37O5
    - annotation: !!omap
      - biggr: dhcholn_c:-1
      - chebi:
        - CHEBI:11893
      - sbo: SBO:0000247
  - !!omap
    - id: acnam_c
    - name: N-acetyl-beta-neuraminate
    - compartment: c
    - charge: -1.0
    - formula: C11H18NO9
    - annotation: !!omap
      - biggr: acnam_c:-1
      - chebi:
        - CHEBI:58705
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hdeACP_c
    - name: Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)
    - compartment: c
    - charge: -1.0
    - formula: C27H49N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hdeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dha_e
    - name: dihydroxyacetone
    - compartment: e
    - charge: 0.0
    - formula: C3H6O3
    - annotation: !!omap
      - biggr: dha_e:0
      - chebi:
        - CHEBI:16016
      - sbo: SBO:0000247
  - !!omap
    - id: pi_c
    - name: hydrogenphosphate
    - compartment: c
    - charge: -2.0
    - formula: HO4P
    - annotation: !!omap
      - biggr: pi_c:-2
      - chebi:
        - CHEBI:43474
      - sbo: SBO:0000247
  - !!omap
    - id: acmana_p
    - name: N-acetyl-D-mannosamine
    - compartment: p
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acmana_p:0
      - chebi:
        - CHEBI:63153
      - sbo: SBO:0000247
  - !!omap
    - id: argsuc_c
    - name: (N(omega)-L-arginino)succinate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H17N4O6
    - annotation: !!omap
      - biggr: argsuc_c:-1
      - chebi:
        - CHEBI:57472
      - sbo: SBO:0000247
  - !!omap
    - id: aacald_c
    - name: ammonioacetaldehyde
    - compartment: c
    - charge: 1.0
    - formula: C2H6NO
    - annotation: !!omap
      - biggr: aacald_c:1
      - chebi:
        - CHEBI:58213
      - sbo: SBO:0000247
  - !!omap
    - id: gbbtn_p
    - name: 4-(trimethylammonio)butanoate
    - compartment: p
    - charge: 0.0
    - formula: C7H15NO2
    - annotation: !!omap
      - biggr: gbbtn_p:0
      - chebi:
        - CHEBI:16244
      - sbo: SBO:0000247
  - !!omap
    - id: nh4_p
    - name: ammonium
    - compartment: p
    - charge: 1.0
    - formula: H4N
    - annotation: !!omap
      - biggr: nh4_p:1
      - chebi:
        - CHEBI:28938
      - sbo: SBO:0000247
  - !!omap
    - id: 4abut_p
    - name: gamma-aminobutyric acid
    - compartment: p
    - charge: 0.0
    - formula: C4H9NO2
    - annotation: !!omap
      - biggr: 4abut_p:0
      - chebi:
        - CHEBI:59888
        - CHEBI:16865
      - sbo: SBO:0000247
  - !!omap
    - id: chor_c
    - name: chorismate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H8O6
    - annotation: !!omap
      - biggr: chor_c:-2
      - chebi:
        - CHEBI:29748
      - sbo: SBO:0000247
  - !!omap
    - id: hom__L_c
    - name: L-homoserine
    - compartment: c
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: hom__L_c:0
      - chebi:
        - CHEBI:57476
        - CHEBI:15699
      - sbo: SBO:0000247
  - !!omap
    - id: cbi_p
    - name: cobinamide
    - compartment: p
    - charge: 0.0
    - formula: C48H72CoN11O8
    - annotation: !!omap
      - biggr: cbi_p:0
      - chebi:
        - CHEBI:28956
      - sbo: SBO:0000247
  - !!omap
    - id: thymd_c
    - name: thymidine
    - compartment: c
    - charge: 0.0
    - formula: C10H14N2O5
    - annotation: !!omap
      - biggr: thymd_c:0
      - chebi:
        - CHEBI:17748
      - sbo: SBO:0000247
  - !!omap
    - id: mnl_p
    - name: D-mannitol
    - compartment: p
    - charge: 0.0
    - formula: C6H14O6
    - annotation: !!omap
      - biggr: mnl_p:0
      - chebi:
        - CHEBI:16899
      - sbo: SBO:0000247
  - !!omap
    - id: gal_bD_e
    - name: beta-D-galactose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: gal_bD_e:0
      - chebi:
        - CHEBI:27667
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__R_c
    - name: (R)-propane-1,2-diol
    - compartment: c
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__R_c:0
      - chebi:
        - CHEBI:28972
      - sbo: SBO:0000247
  - !!omap
    - id: dgdp_c
    - name: dGDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H12N5O10P2
    - annotation: !!omap
      - biggr: dgdp_c:-3
      - chebi:
        - CHEBI:58595
      - sbo: SBO:0000247
  - !!omap
    - id: glu1sa_c
    - name: (S)-4-amino-5-oxopentanoic acid
    - compartment: c
    - charge: 0.0
    - formula: C5H9NO3
    - annotation: !!omap
      - biggr: glu1sa_c:0
      - chebi:
        - CHEBI:57501
        - CHEBI:15757
      - sbo: SBO:0000247
  - !!omap
    - id: dad_5_c
    - name: 5'-deoxyadenosine
    - compartment: c
    - charge: 0.0
    - formula: C10H13N5O3
    - annotation: !!omap
      - biggr: dad_5_c:0
      - chebi:
        - CHEBI:17319
      - sbo: SBO:0000247
  - !!omap
    - id: imp_p
    - name: IMP(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H11N4O8P
    - annotation: !!omap
      - biggr: imp_p:-2
      - chebi:
        - CHEBI:58053
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__LalaDgluMdap_p
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate
    - compartment: p
    - charge: -1.0
    - formula: C15H25N4O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LalaDgluMdap_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cit_e
    - name: citrate(3-)
    - compartment: e
    - charge: -3.0
    - formula: C6H5O7
    - annotation: !!omap
      - biggr: cit_e:-3
      - chebi:
        - CHEBI:16947
      - sbo: SBO:0000247
  - !!omap
    - id: glcur1p_p
    - name: 1-phosphonato-alpha-D-glucuronate(3-)
    - compartment: p
    - charge: -3.0
    - formula: C6H8O10P
    - annotation: !!omap
      - biggr: glcur1p_p:-3
      - chebi:
        - CHEBI:57897
      - sbo: SBO:0000247
  - !!omap
    - id: leu__L_e
    - name: L-leucine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C6H13NO2
    - annotation: !!omap
      - biggr: leu__L_e:0
      - chebi:
        - CHEBI:57427
        - CHEBI:15603
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hhlipa_c
    - name: Heptosyl-heptosyl-kdo2-lipidA
    - compartment: c
    - charge: -6.0
    - formula: C124H220N2O51P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hhlipa_c:-6
      - sbo: SBO:0000247
  - !!omap
    - id: skm_p
    - name: shikimate
    - compartment: p
    - charge: -1.0
    - formula: C7H9O5
    - annotation: !!omap
      - biggr: skm_p:-1
      - chebi:
        - CHEBI:36208
      - sbo: SBO:0000247
  - !!omap
    - id: crnDcoa_c
    - name: (S)-carnitinyl-CoA(3-)
    - compartment: c
    - charge: -3.0
    - formula: C28H46N8O18P3S
    - annotation: !!omap
      - biggr: crnDcoa_c:-3
      - chebi:
        - CHEBI:62047
      - sbo: SBO:0000247
  - !!omap
    - id: zn2_c
    - name: zinc(2+)
    - compartment: c
    - charge: 2.0
    - formula: Zn
    - annotation: !!omap
      - biggr: zn2_c:2
      - chebi:
        - CHEBI:29105
      - sbo: SBO:0000247
  - !!omap
    - id: q8h2_c
    - name: ubiquinol-8
    - compartment: c
    - charge: 0.0
    - formula: C49H76O4
    - annotation: !!omap
      - biggr: q8h2_c:0
      - chebi:
        - CHEBI:61682
      - sbo: SBO:0000247
  - !!omap
    - id: ala__D_e
    - name: D-alanine
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala__D_e:0
      - chebi:
        - CHEBI:57416
        - CHEBI:15570
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5px3p_p
    - name: Two disacharide linked murein units, pentapeptide corsslinked 
        tripeptide (A2pm->A2pm) (middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C74H112N14O39
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5px3p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: fe2_e
    - name: iron(2+)
    - compartment: e
    - charge: 2.0
    - formula: Fe
    - annotation: !!omap
      - biggr: fe2_e:2
      - chebi:
        - CHEBI:29033
      - sbo: SBO:0000247
  - !!omap
    - id: skm_e
    - name: shikimate
    - compartment: e
    - charge: -1.0
    - formula: C7H9O5
    - annotation: !!omap
      - biggr: skm_e:-1
      - chebi:
        - CHEBI:36208
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe161_p
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1)
    - compartment: p
    - charge: 0.0
    - formula: C21H42NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe161_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3odecACP_c
    - name: 3-Oxodecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C21H37N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3odecACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: galt_e
    - name: galactitol
    - compartment: e
    - charge: 0.0
    - formula: C6H14O6
    - annotation: !!omap
      - biggr: galt_e:0
      - chebi:
        - CHEBI:16813
      - sbo: SBO:0000247
  - !!omap
    - id: 5dglcn_e
    - name: 5-dehydro-D-gluconate
    - compartment: e
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: 5dglcn_e:-1
      - chebi:
        - CHEBI:58143
      - sbo: SBO:0000247
  - !!omap
    - id: unagamu_c
    - name: 
        beta-D-ManNAcA-(1->4)-alpha-D-GlcNAc-1-diphospho-ditrans,polycis-undecaprenol(3-)
    - compartment: c
    - charge: -3.0
    - formula: C71H113N2O18P2
    - annotation: !!omap
      - biggr: unagamu_c:-3
      - chebi:
        - CHEBI:61495
      - sbo: SBO:0000247
  - !!omap
    - id: 5prdmbz_c
    - name: alpha-ribazole 5'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C14H17N2O7P
    - annotation: !!omap
      - biggr: 5prdmbz_c:-2
      - chebi:
        - CHEBI:57918
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1tdecg3p_c
    - name: 1-tetradecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C17H33O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1tdecg3p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: pa140_c
    - name: 1,2-dimyrsitoylphosphatidate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C31H59O8P
    - annotation: !!omap
      - biggr: pa140_c:-2
      - chebi:
        - CHEBI:83321
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdtdec7eg_c
    - name: CDP-1,2-ditetradec-7-enoylglycerol
    - compartment: c
    - charge: -2.0
    - formula: C40H67N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdtdec7eg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: cynt_e
    - name: cyanate
    - compartment: e
    - charge: -1.0
    - formula: CNO
    - annotation: !!omap
      - biggr: cynt_e:-1
      - chebi:
        - CHEBI:29195
      - sbo: SBO:0000247
  - !!omap
    - id: dgslnt_c
    - name: selenodiglutathione(2-)
    - compartment: c
    - charge: -2.0
    - formula: C20H30N6O12S2Se
    - annotation: !!omap
      - biggr: dgslnt_c:-2
      - chebi:
        - CHEBI:71259
      - sbo: SBO:0000247
  - !!omap
    - id: cit_p
    - name: citrate(3-)
    - compartment: p
    - charge: -3.0
    - formula: C6H5O7
    - annotation: !!omap
      - biggr: cit_p:-3
      - chebi:
        - CHEBI:16947
      - sbo: SBO:0000247
  - !!omap
    - id: xan_p
    - name: 7H-xanthine
    - compartment: p
    - charge: 0.0
    - formula: C5H4N4O2
    - annotation: !!omap
      - biggr: xan_p:0
      - chebi:
        - CHEBI:17712
        - CHEBI:48517
      - sbo: SBO:0000247
  - !!omap
    - id: 2agpe140_c
    - name: PE(0:0/14:0)
    - compartment: c
    - charge: 0.0
    - formula: C19H40NO7P
    - annotation: !!omap
      - biggr: 2agpe140_c:0
      - chebi:
        - CHEBI:145244
      - sbo: SBO:0000247
  - !!omap
    - id: teo2_c
    - name: tellurite
    - compartment: c
    - charge: -2.0
    - formula: O3Te
    - annotation: !!omap
      - biggr: teo2_c:-2
      - chebi:
        - CHEBI:30477
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sufsesh_c
    - name: SufSE with bound sulfur
    - compartment: c
    - charge: 0.0
    - formula: HS2R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sufsesh_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: tyr__L_c
    - name: L-tyrosine
    - compartment: c
    - charge: 0.0
    - formula: C9H11NO3
    - annotation: !!omap
      - biggr: tyr__L_c:0
      - chebi:
        - CHEBI:58315
        - CHEBI:17895
      - sbo: SBO:0000247
  - !!omap
    - id: fruur_p
    - name: D-fructofuranuronate
    - compartment: p
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: fruur_p:-1
      - chebi:
        - CHEBI:59863
      - sbo: SBO:0000247
  - !!omap
    - id: ggptrc_c
    - name: gamma-L-glutamylputrescinium(1+)
    - compartment: c
    - charge: 1.0
    - formula: C9H20N3O3
    - annotation: !!omap
      - biggr: ggptrc_c:1
      - chebi:
        - CHEBI:58731
      - sbo: SBO:0000247
  - !!omap
    - id: cys__L_c
    - name: L-cysteine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__L_c:0
      - chebi:
        - CHEBI:35235
        - CHEBI:17561
      - sbo: SBO:0000247
  - !!omap
    - id: 4abzglu_e
    - name: N-(4-aminobenzoyl)-L-glutamate
    - compartment: e
    - charge: -2.0
    - formula: C12H12N2O5
    - annotation: !!omap
      - biggr: 4abzglu_e:-2
      - chebi:
        - CHEBI:60903
      - sbo: SBO:0000247
  - !!omap
    - id: 2aobut_c
    - name: L-2-amino-3-oxobutanoic acid
    - compartment: c
    - charge: 0.0
    - formula: C4H7NO3
    - annotation: !!omap
      - biggr: 2aobut_c:0
      - chebi:
        - CHEBI:78948
        - CHEBI:40673
      - sbo: SBO:0000247
  - !!omap
    - id: sulfac_e
    - name: sulfonatoacetate
    - compartment: e
    - charge: -2.0
    - formula: C2H2O5S
    - annotation: !!omap
      - biggr: sulfac_e:-2
      - chebi:
        - CHEBI:58824
      - sbo: SBO:0000247
  - !!omap
    - id: lkdr_c
    - name: 2-dehydro-3-deoxy-L-rhamnonate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O5
    - annotation: !!omap
      - biggr: lkdr_c:-1
      - chebi:
        - CHEBI:58371
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps160_c
    - name: Phosphatidylserine (dihexadecanoyl, n-C16:0)
    - compartment: c
    - charge: -1.0
    - formula: C38H73N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps160_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 4r5au_c
    - name: 5-amino-6-(D-ribitylamino)uracil
    - compartment: c
    - charge: 0.0
    - formula: C9H16N4O6
    - annotation: !!omap
      - biggr: 4r5au_c:0
      - chebi:
        - CHEBI:15934
      - sbo: SBO:0000247
  - !!omap
    - id: 3hbzcoa_c
    - name: 3-hydroxybenzoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C28H36N7O18P3S
    - annotation: !!omap
      - biggr: 3hbzcoa_c:-4
      - chebi:
        - CHEBI:57342
      - sbo: SBO:0000247
  - !!omap
    - id: gam_e
    - name: 2-ammonio-2-deoxy-D-glucopyranose
    - compartment: e
    - charge: 1.0
    - formula: C6H14NO5
    - annotation: !!omap
      - biggr: gam_e:1
      - chebi:
        - CHEBI:58723
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg120_c
    - name: Phosphatidylglycerol (didodecanoyl, n-C12:0)
    - compartment: c
    - charge: -1.0
    - formula: C30H58O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg120_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe141_p
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1)
    - compartment: p
    - charge: 0.0
    - formula: C19H38NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe141_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: met__L_e
    - name: L-methionine
    - compartment: e
    - charge: 0.0
    - formula: C5H11NO2S
    - annotation: !!omap
      - biggr: met__L_e:0
      - chebi:
        - CHEBI:57844
        - CHEBI:16643
      - sbo: SBO:0000247
  - !!omap
    - id: xylu__D_c
    - name: D-xylulose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xylu__D_c:0
      - chebi:
        - CHEBI:17140
      - sbo: SBO:0000247
  - !!omap
    - id: 4hbz_c
    - name: 4-hydroxybenzoate
    - compartment: c
    - charge: -1.0
    - formula: C7H5O3
    - annotation: !!omap
      - biggr: 4hbz_c:-1
      - chebi:
        - CHEBI:17879
      - sbo: SBO:0000247
  - !!omap
    - id: amet_c
    - name: (S)-S-adenosyl-L-methionine
    - compartment: c
    - charge: 1.0
    - formula: C15H23N6O5S
    - annotation: !!omap
      - biggr: amet_c:1
      - chebi:
        - CHEBI:142094
        - CHEBI:33442
      - sbo: SBO:0000247
  - !!omap
    - id: pre2_c
    - name: precorrin-2(7-)
    - compartment: c
    - charge: -7.0
    - formula: C42H41N4O16
    - annotation: !!omap
      - biggr: pre2_c:-7
      - chebi:
        - CHEBI:58827
      - sbo: SBO:0000247
  - !!omap
    - id: hxa_c
    - name: hexanoate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O2
    - annotation: !!omap
      - biggr: hxa_c:-1
      - chebi:
        - CHEBI:17120
      - sbo: SBO:0000247
  - !!omap
    - id: h2s_c
    - name: hydrogen sulfide
    - compartment: c
    - charge: 0.0
    - formula: H2S
    - annotation: !!omap
      - biggr: h2s_c:0
      - chebi:
        - CHEBI:16136
      - sbo: SBO:0000247
  - !!omap
    - id: phthr_c
    - name: 4-(phosphonatooxy)-L-threonine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H8NO7P
    - annotation: !!omap
      - biggr: phthr_c:-2
      - chebi:
        - CHEBI:58452
      - sbo: SBO:0000247
  - !!omap
    - id: acmana_e
    - name: N-acetyl-D-mannosamine
    - compartment: e
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acmana_e:0
      - chebi:
        - CHEBI:63153
      - sbo: SBO:0000247
  - !!omap
    - id: 3oocoa_c
    - name: 3-oxooctanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H44N7O18P3S
    - annotation: !!omap
      - biggr: 3oocoa_c:-4
      - chebi:
        - CHEBI:62619
      - sbo: SBO:0000247
  - !!omap
    - id: n8aspmd_c
    - name: N(8)-acetylspermidinium(2+)
    - compartment: c
    - charge: 2.0
    - formula: C9H23N3O
    - annotation: !!omap
      - biggr: n8aspmd_c:2
      - chebi:
        - CHEBI:58535
      - sbo: SBO:0000247
  - !!omap
    - id: acgam1p_c
    - name: N-acetyl-alpha-D-glucosamine 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acgam1p_c:-2
      - chebi:
        - CHEBI:57776
      - sbo: SBO:0000247
  - !!omap
    - id: ascb__L_e
    - name: L-ascorbic acid
    - compartment: e
    - charge: 0.0
    - formula: C6H8O6
    - annotation: !!omap
      - biggr: ascb__L_e:0
      - chebi:
        - CHEBI:29073
      - sbo: SBO:0000247
  - !!omap
    - id: malt_e
    - name: maltose
    - compartment: e
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: malt_e:0
      - chebi:
        - CHEBI:17306
      - sbo: SBO:0000247
  - !!omap
    - id: thymd_p
    - name: thymidine
    - compartment: p
    - charge: 0.0
    - formula: C10H14N2O5
    - annotation: !!omap
      - biggr: thymd_p:0
      - chebi:
        - CHEBI:17748
      - sbo: SBO:0000247
  - !!omap
    - id: mn2_e
    - name: manganese(2+)
    - compartment: e
    - charge: 2.0
    - formula: Mn
    - annotation: !!omap
      - biggr: mn2_e:2
      - chebi:
        - CHEBI:29035
      - sbo: SBO:0000247
  - !!omap
    - id: ditp_c
    - name: dITP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H11N4O13P3
    - annotation: !!omap
      - biggr: ditp_c:-4
      - chebi:
        - CHEBI:61382
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__u23ga_c
    - name: UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine
    - compartment: c
    - charge: -2.0
    - formula: C43H75N3O20P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__u23ga_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__23dappa_e
    - name: 2,3-diaminopropionate
    - compartment: e
    - charge: 1.0
    - formula: C3H9N2O2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__23dappa_e:1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__um4p_c
    - name: 
        UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine
    - compartment: c
    - charge: -4.0
    - formula: C38H56N8O27P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__um4p_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: 3hppnl_c
    - name: 3-hydroxypropanal
    - compartment: c
    - charge: 0.0
    - formula: C3H6O2
    - annotation: !!omap
      - biggr: 3hppnl_c:0
      - chebi:
        - CHEBI:17871
      - sbo: SBO:0000247
  - !!omap
    - id: cs1_e
    - name: caesium(1+)
    - compartment: e
    - charge: 1.0
    - formula: Cs
    - annotation: !!omap
      - biggr: cs1_e:1
      - chebi:
        - CHEBI:49547
      - sbo: SBO:0000247
  - !!omap
    - id: glyc2p_c
    - name: glycerol 2-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H7O6P
    - annotation: !!omap
      - biggr: glyc2p_c:-2
      - chebi:
        - CHEBI:58083
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__wco_c
    - name: Tungsten binding cofactor
    - compartment: c
    - charge: -2.0
    - formula: C10H10N5O8PS2W
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__wco_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__uLa4fn_c
    - name: Undecaprenyl phosphate-4-amino-4-formyl-L-arabinose
    - compartment: c
    - charge: -1.0
    - formula: C61H99N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__uLa4fn_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: lipa_p
    - name: (Kdo)2-lipid A(6-) (E. coli)
    - compartment: p
    - charge: -6.0
    - formula: C110H196N2O39P2
    - annotation: !!omap
      - biggr: lipa_p:-6
      - chebi:
        - CHEBI:58540
      - sbo: SBO:0000247
  - !!omap
    - id: glc__D_c
    - name: D-glucopyranose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: glc__D_c:0
      - chebi:
        - CHEBI:4167
      - sbo: SBO:0000247
  - !!omap
    - id: zn2_p
    - name: zinc(2+)
    - compartment: p
    - charge: 2.0
    - formula: Zn
    - annotation: !!omap
      - biggr: zn2_p:2
      - chebi:
        - CHEBI:29105
      - sbo: SBO:0000247
  - !!omap
    - id: dhmpt_c
    - name: 7,8-dihydromonapterin
    - compartment: c
    - charge: 0.0
    - formula: C9H13N5O4
    - annotation: !!omap
      - biggr: dhmpt_c:0
      - chebi:
        - CHEBI:71175
      - sbo: SBO:0000247
  - !!omap
    - id: e4p_c
    - name: D-erythrose 4-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H7O7P
    - annotation: !!omap
      - biggr: e4p_c:-2
      - chebi:
        - CHEBI:16897
      - sbo: SBO:0000247
  - !!omap
    - id: mincyc_p
    - name: minocycline zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C23H27N3O7
    - annotation: !!omap
      - biggr: mincyc_p:0
      - chebi:
        - CHEBI:77906
        - CHEBI:50694
      - sbo: SBO:0000247
  - !!omap
    - id: hg2_c
    - name: mercury(2+)
    - compartment: c
    - charge: 2.0
    - formula: Hg
    - annotation: !!omap
      - biggr: hg2_c:2
      - chebi:
        - CHEBI:16793
      - sbo: SBO:0000247
  - !!omap
    - id: man1p_c
    - name: alpha-D-mannose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: man1p_c:-2
      - chebi:
        - CHEBI:58409
      - sbo: SBO:0000247
  - !!omap
    - id: 2tpr3dpcoa_c
    - name: 2'-(5-triphosphoribosyl)-3'-dephospho-CoA(6-)
    - compartment: c
    - charge: -6.0
    - formula: C26H40N7O26P5S
    - annotation: !!omap
      - biggr: 2tpr3dpcoa_c:-6
      - chebi:
        - CHEBI:61378
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bglycogen_c
    - name: Branching glycogen
    - compartment: c
    - charge: 0.0
    - formula: C6H10O5
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bglycogen_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: sq_c
    - name: 6-sulfo-alpha-D-quinovose(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H11O8S
    - annotation: !!omap
      - biggr: sq_c:-1
      - chebi:
        - CHEBI:142956
      - sbo: SBO:0000247
  - !!omap
    - id: sfp_c
    - name: 6-deoxy-6-sulfo-D-fructofuranose 1-phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H10O11PS
    - annotation: !!omap
      - biggr: sfp_c:-3
      - chebi:
        - CHEBI:77134
      - sbo: SBO:0000247
  - !!omap
    - id: trp__L_c
    - name: L-tryptophan zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C11H12N2O2
    - annotation: !!omap
      - biggr: trp__L_c:0
      - chebi:
        - CHEBI:57912
        - CHEBI:16828
      - sbo: SBO:0000247
  - !!omap
    - id: sq_e
    - name: 6-sulfo-alpha-D-quinovose(1-)
    - compartment: e
    - charge: -1.0
    - formula: C6H11O8S
    - annotation: !!omap
      - biggr: sq_e:-1
      - chebi:
        - CHEBI:142956
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbdox_c
    - name: Fused thiol:disulfide interchange protein (oxidized)
    - compartment: c
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbdox_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: acser_c
    - name: O-acetyl-L-serine
    - compartment: c
    - charge: 0.0
    - formula: C5H9NO4
    - annotation: !!omap
      - biggr: acser_c:0
      - chebi:
        - CHEBI:58340
        - CHEBI:17981
      - sbo: SBO:0000247
  - !!omap
    - id: progly_e
    - name: L-prolinylglycine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C7H12N2O3
    - annotation: !!omap
      - biggr: progly_e:0
      - chebi:
        - CHEBI:61696
        - CHEBI:61695
      - sbo: SBO:0000247
  - !!omap
    - id: 5phdt_c
    - name: D-5-phenylhydantoin
    - compartment: c
    - charge: 0.0
    - formula: C9H8N2O2
    - annotation: !!omap
      - biggr: 5phdt_c:0
      - chebi:
        - CHEBI:140750
      - sbo: SBO:0000247
  - !!omap
    - id: lys__L_c
    - name: L-lysinium(1+)
    - compartment: c
    - charge: 1.0
    - formula: C6H15N2O2
    - annotation: !!omap
      - biggr: lys__L_c:1
      - chebi:
        - CHEBI:32551
      - sbo: SBO:0000247
  - !!omap
    - id: adpglc_c
    - name: ADP alpha-D-glucoside(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H23N5O15P2
    - annotation: !!omap
      - biggr: adpglc_c:-2
      - chebi:
        - CHEBI:57498
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ogmeACP_c
    - name: 3-Oxo-glutaryl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C17H27N2O11PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ogmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hpmeACP_c
    - name: 3-Hydroxypimeloyl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C19H33N2O11PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hpmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dudp_c
    - name: dUDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H11N2O11P2
    - annotation: !!omap
      - biggr: dudp_c:-3
      - chebi:
        - CHEBI:60471
      - sbo: SBO:0000247
  - !!omap
    - id: 2shchc_c
    - name: 
        (1R,6R)-2-(3-carboxylatopropanoyl)-6-hydroxycyclohexa-2,4-diene-1-carboxylate
    - compartment: c
    - charge: -2.0
    - formula: C11H10O6
    - annotation: !!omap
      - biggr: 2shchc_c:-2
      - chebi:
        - CHEBI:58689
      - sbo: SBO:0000247
  - !!omap
    - id: 4ppan_c
    - name: (R)-4'-phosphonatopantothenate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H15NO8P
    - annotation: !!omap
      - biggr: 4ppan_c:-3
      - chebi:
        - CHEBI:10986
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sufse_c
    - name: SufSE sulfur acceptor complex
    - compartment: c
    - charge: 0.0
    - formula: HSR
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sufse_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: dxyl5p_c
    - name: 1-deoxy-D-xylulose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O7P
    - annotation: !!omap
      - biggr: dxyl5p_c:-2
      - chebi:
        - CHEBI:57792
      - sbo: SBO:0000247
  - !!omap
    - id: cs1_p
    - name: caesium(1+)
    - compartment: p
    - charge: 1.0
    - formula: Cs
    - annotation: !!omap
      - biggr: cs1_p:1
      - chebi:
        - CHEBI:49547
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhb_c
    - name: 2,3-dihydroxybenzoate
    - compartment: c
    - charge: -1.0
    - formula: C7H5O4
    - annotation: !!omap
      - biggr: 23dhb_c:-1
      - chebi:
        - CHEBI:36654
      - sbo: SBO:0000247
  - !!omap
    - id: man_e
    - name: D-mannopyranose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: man_e:0
      - chebi:
        - CHEBI:4208
      - sbo: SBO:0000247
  - !!omap
    - id: 2mecdp_c
    - name: 2-C-methyl-D-erythritol 2,4-cyclic diphosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H10O9P2
    - annotation: !!omap
      - biggr: 2mecdp_c:-2
      - chebi:
        - CHEBI:58483
      - sbo: SBO:0000247
  - !!omap
    - id: atp_c
    - name: ATP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H12N5O13P3
    - annotation: !!omap
      - biggr: atp_c:-4
      - chebi:
        - CHEBI:30616
      - sbo: SBO:0000247
  - !!omap
    - id: acmana_c
    - name: N-acetyl-D-mannosamine
    - compartment: c
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acmana_c:0
      - chebi:
        - CHEBI:63153
      - sbo: SBO:0000247
  - !!omap
    - id: rbl__L_c
    - name: L-ribulose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: rbl__L_c:0
      - chebi:
        - CHEBI:16880
      - sbo: SBO:0000247
  - !!omap
    - id: dcyt_e
    - name: 2'-deoxycytidine
    - compartment: e
    - charge: 0.0
    - formula: C9H13N3O4
    - annotation: !!omap
      - biggr: dcyt_e:0
      - chebi:
        - CHEBI:15698
      - sbo: SBO:0000247
  - !!omap
    - id: fcl__L_c
    - name: L-fuculose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: fcl__L_c:0
      - chebi:
        - CHEBI:17617
      - sbo: SBO:0000247
  - !!omap
    - id: orot_e
    - name: orotate
    - compartment: e
    - charge: -1.0
    - formula: C5H3N2O4
    - annotation: !!omap
      - biggr: orot_e:-1
      - chebi:
        - CHEBI:30839
      - sbo: SBO:0000247
  - !!omap
    - id: agdpcbi_c
    - name: adenosylcobinamide guanosyl diphosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C68H95CoN21O21P2
    - annotation: !!omap
      - biggr: agdpcbi_c:-1
      - chebi:
        - CHEBI:60487
      - sbo: SBO:0000247
  - !!omap
    - id: indole_c
    - name: 3H-indole
    - compartment: c
    - charge: 0.0
    - formula: C8H7N
    - annotation: !!omap
      - biggr: indole_c:0
      - chebi:
        - CHEBI:16881
        - CHEBI:35579
      - sbo: SBO:0000247
  - !!omap
    - id: eig3p_c
    - name: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H9N2O6P
    - annotation: !!omap
      - biggr: eig3p_c:-2
      - chebi:
        - CHEBI:58278
      - sbo: SBO:0000247
  - !!omap
    - id: h2_e
    - name: dihydrogen
    - compartment: e
    - charge: 0.0
    - formula: H2
    - annotation: !!omap
      - biggr: h2_e:0
      - chebi:
        - CHEBI:18276
      - sbo: SBO:0000247
  - !!omap
    - id: 26dap__M_c
    - name: meso-2,6-diaminopimelic acid dizwitterion
    - compartment: c
    - charge: 0.0
    - formula: C7H14N2O4
    - annotation: !!omap
      - biggr: 26dap__M_c:0
      - chebi:
        - CHEBI:57791
        - CHEBI:16488
      - sbo: SBO:0000247
  - !!omap
    - id: u3aga_c
    - name: UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetylglucosamine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C31H51N3O19P2
    - annotation: !!omap
      - biggr: u3aga_c:-2
      - chebi:
        - CHEBI:61494
      - sbo: SBO:0000247
  - !!omap
    - id: nmn_e
    - name: NMN(-)
    - compartment: e
    - charge: -1.0
    - formula: C11H14N2O8P
    - annotation: !!omap
      - biggr: nmn_e:-1
      - chebi:
        - CHEBI:14649
      - sbo: SBO:0000247
  - !!omap
    - id: thm_c
    - name: thiamine(1+)
    - compartment: c
    - charge: 1.0
    - formula: C12H17N4OS
    - annotation: !!omap
      - biggr: thm_c:1
      - chebi:
        - CHEBI:18385
      - sbo: SBO:0000247
  - !!omap
    - id: thf_c
    - name: (6S)-5,6,7,8-tetrahydrofolate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C19H21N7O6
    - annotation: !!omap
      - biggr: thf_c:-2
      - chebi:
        - CHEBI:57453
      - sbo: SBO:0000247
  - !!omap
    - id: man6p_e
    - name: alpha-D-mannose 6-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: man6p_e:-2
      - chebi:
        - CHEBI:60332
      - sbo: SBO:0000247
  - !!omap
    - id: orot5p_c
    - name: orotidine 5'-phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H10N2O11P
    - annotation: !!omap
      - biggr: orot5p_c:-3
      - chebi:
        - CHEBI:57538
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feoxam_c
    - name: Generic ferrioxamine-Fe-III
    - compartment: c
    - charge: 1.0
    - formula: C25H46FeN6O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feoxam_c:1
      - sbo: SBO:0000247
  - !!omap
    - id: h_e
    - name: hydron
    - compartment: e
    - charge: 1.0
    - formula: H
    - annotation: !!omap
      - biggr: h_e:1
      - chebi:
        - CHEBI:15378
      - sbo: SBO:0000247
  - !!omap
    - id: csn_p
    - name: cytosine
    - compartment: p
    - charge: 0.0
    - formula: C4H5N3O
    - annotation: !!omap
      - biggr: csn_p:0
      - chebi:
        - CHEBI:16040
      - sbo: SBO:0000247
  - !!omap
    - id: aact_c
    - name: ammonioacetone
    - compartment: c
    - charge: 1.0
    - formula: C3H8NO
    - annotation: !!omap
      - biggr: aact_c:1
      - chebi:
        - CHEBI:58320
      - sbo: SBO:0000247
  - !!omap
    - id: gln__L_p
    - name: L-glutamine
    - compartment: p
    - charge: 0.0
    - formula: C5H10N2O3
    - annotation: !!omap
      - biggr: gln__L_p:0
      - chebi:
        - CHEBI:58359
        - CHEBI:18050
      - sbo: SBO:0000247
  - !!omap
    - id: glyc_p
    - name: glycerol
    - compartment: p
    - charge: 0.0
    - formula: C3H8O3
    - annotation: !!omap
      - biggr: glyc_p:0
      - chebi:
        - CHEBI:17754
      - sbo: SBO:0000247
  - !!omap
    - id: cytd_p
    - name: cytidine
    - compartment: p
    - charge: 0.0
    - formula: C9H13N3O5
    - annotation: !!omap
      - biggr: cytd_p:0
      - chebi:
        - CHEBI:17562
      - sbo: SBO:0000247
  - !!omap
    - id: thr__L_p
    - name: L-threonine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: thr__L_p:0
      - chebi:
        - CHEBI:57926
        - CHEBI:16857
      - sbo: SBO:0000247
  - !!omap
    - id: asn__L_e
    - name: L-asparagine
    - compartment: e
    - charge: 0.0
    - formula: C4H8N2O3
    - annotation: !!omap
      - biggr: asn__L_e:0
      - chebi:
        - CHEBI:58048
        - CHEBI:17196
      - sbo: SBO:0000247
  - !!omap
    - id: fuc__L_p
    - name: alpha-L-fucose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: fuc__L_p:0
      - chebi:
        - CHEBI:42548
      - sbo: SBO:0000247
  - !!omap
    - id: 5caiz_c
    - name: 5-carboxylatoamino-1-(5-O-phosphonato-D-ribosyl)imidazole(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H11N3O9P
    - annotation: !!omap
      - biggr: 5caiz_c:-3
      - chebi:
        - CHEBI:58730
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dhnpt_c
    - name: Dihydroneopterin
    - compartment: c
    - charge: 0.0
    - formula: C9H13N5O4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dhnpt_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: pyam5p_c
    - name: pyridoxamine 5'-phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C8H12N2O5P
    - annotation: !!omap
      - biggr: pyam5p_c:-1
      - chebi:
        - CHEBI:58451
      - sbo: SBO:0000247
  - !!omap
    - id: ttdca_p
    - name: tetradecanoate
    - compartment: p
    - charge: -1.0
    - formula: C14H27O2
    - annotation: !!omap
      - biggr: ttdca_p:-1
      - chebi:
        - CHEBI:30807
      - sbo: SBO:0000247
  - !!omap
    - id: acgam_c
    - name: N-acetyl-D-glucosamine
    - compartment: c
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acgam_c:0
      - chebi:
        - CHEBI:506227
      - sbo: SBO:0000247
  - !!omap
    - id: metsox_S__L_p
    - name: L-methionine (S)-S-oxide
    - compartment: p
    - charge: 0.0
    - formula: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_S__L_p:0
      - chebi:
        - CHEBI:58772
        - CHEBI:49031
      - sbo: SBO:0000247
  - !!omap
    - id: mal__L_p
    - name: (S)-malate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H4O5
    - annotation: !!omap
      - biggr: mal__L_p:-2
      - chebi:
        - CHEBI:15589
      - sbo: SBO:0000247
  - !!omap
    - id: pacald_p
    - name: phenylacetaldehyde
    - compartment: p
    - charge: 0.0
    - formula: C8H8O
    - annotation: !!omap
      - biggr: pacald_p:0
      - chebi:
        - CHEBI:16424
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__eca4colipa_p
    - name: (enterobacterial common antigen)x4 core oligosaccharide lipid A
    - compartment: p
    - charge: -15.0
    - formula: C272H447N14O160P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__eca4colipa_p:-15
      - sbo: SBO:0000247
  - !!omap
    - id: lcts_e
    - name: lactose
    - compartment: e
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: lcts_e:0
      - chebi:
        - CHEBI:17716
      - sbo: SBO:0000247
  - !!omap
    - id: btcoa_c
    - name: butyryl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C25H38N7O17P3S
    - annotation: !!omap
      - biggr: btcoa_c:-4
      - chebi:
        - CHEBI:57371
      - sbo: SBO:0000247
  - !!omap
    - id: tmao_p
    - name: trimethylamine N-oxide
    - compartment: p
    - charge: 0.0
    - formula: C3H9NO
    - annotation: !!omap
      - biggr: tmao_p:0
      - chebi:
        - CHEBI:15724
      - sbo: SBO:0000247
  - !!omap
    - id: u3hga_c
    - name: UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamine(1-)
    - compartment: c
    - charge: -1.0
    - formula: C29H50N3O18P2
    - annotation: !!omap
      - biggr: u3hga_c:-1
      - chebi:
        - CHEBI:71573
      - sbo: SBO:0000247
  - !!omap
    - id: tdcoa_c
    - name: myristoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C35H58N7O17P3S
    - annotation: !!omap
      - biggr: tdcoa_c:-4
      - chebi:
        - CHEBI:57385
      - sbo: SBO:0000247
  - !!omap
    - id: udpglcur_e
    - name: UDP-alpha-D-glucuronate(3-)
    - compartment: e
    - charge: -3.0
    - formula: C15H19N2O18P2
    - annotation: !!omap
      - biggr: udpglcur_e:-3
      - chebi:
        - CHEBI:58052
      - sbo: SBO:0000247
  - !!omap
    - id: hxa_p
    - name: hexanoate
    - compartment: p
    - charge: -1.0
    - formula: C6H11O2
    - annotation: !!omap
      - biggr: hxa_p:-1
      - chebi:
        - CHEBI:17120
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein3px3p_p
    - name: Two disacharide linked murein units, tripeptide crosslinked 
        tripeptide (A2pm->A2pm) (middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C68H102N12O37
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein3px3p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hcpalm9eACP_c
    - name: (R)-3-hydroxy-cis-palm-9-eoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C27H49N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hcpalm9eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dca_e
    - name: decanoate
    - compartment: e
    - charge: -1.0
    - formula: C10H19O2
    - annotation: !!omap
      - biggr: dca_e:-1
      - chebi:
        - CHEBI:27689
      - sbo: SBO:0000247
  - !!omap
    - id: mobd_p
    - name: molybdate
    - compartment: p
    - charge: -2.0
    - formula: MoO4
    - annotation: !!omap
      - biggr: mobd_p:-2
      - chebi:
        - CHEBI:36264
      - sbo: SBO:0000247
  - !!omap
    - id: malt6p_c
    - name: alpha-maltose 6'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C12H21O14P
    - annotation: !!omap
      - biggr: malt6p_c:-2
      - chebi:
        - CHEBI:57478
      - sbo: SBO:0000247
  - !!omap
    - id: met__L_p
    - name: L-methionine
    - compartment: p
    - charge: 0.0
    - formula: C5H11NO2S
    - annotation: !!omap
      - biggr: met__L_p:0
      - chebi:
        - CHEBI:57844
        - CHEBI:16643
      - sbo: SBO:0000247
  - !!omap
    - id: g1p_p
    - name: D-glucopyranose 1-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: g1p_p:-2
      - chebi:
        - CHEBI:57629
      - sbo: SBO:0000247
  - !!omap
    - id: ser__L_p
    - name: L-serine
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO3
    - annotation: !!omap
      - biggr: ser__L_p:0
      - chebi:
        - CHEBI:33384
        - CHEBI:17115
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ocpalm9eACP_c
    - name: 3-oxo-cis-palm-9-eoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C27H47N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ocpalm9eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2ddecg3p_c
    - name: 2-dodecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C15H30O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2ddecg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm3p_c
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide
    - compartment: c
    - charge: -2.0
    - formula: C34H52N6O19
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm3p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpe161_p
    - name: 1-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1)
    - compartment: p
    - charge: 0.0
    - formula: C21H42NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpe161_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: octa_p
    - name: octanoate
    - compartment: p
    - charge: -1.0
    - formula: C8H15O2
    - annotation: !!omap
      - biggr: octa_p:-1
      - chebi:
        - CHEBI:25646
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ggagicolipa_c
    - name: Glucosyl-galactosyl-glucosyl-inner core oligosaccharide lipid A
    - compartment: c
    - charge: -11.0
    - formula: C163H281N2O89P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ggagicolipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: chtbs_e
    - name: N,N'-diacetylchitobiose
    - compartment: e
    - charge: 0.0
    - formula: C16H28N2O11
    - annotation: !!omap
      - biggr: chtbs_e:0
      - chebi:
        - CHEBI:28681
      - sbo: SBO:0000247
  - !!omap
    - id: dopa_e
    - name: dopaminium(1+)
    - compartment: e
    - charge: 1.0
    - formula: C8H12NO2
    - annotation: !!omap
      - biggr: dopa_e:1
      - chebi:
        - CHEBI:59905
      - sbo: SBO:0000247
  - !!omap
    - id: prpnte_p
    - name: propionate
    - compartment: p
    - charge: -1.0
    - formula: C3H5O2
    - annotation: !!omap
      - biggr: prpnte_p:-1
      - chebi:
        - CHEBI:17272
      - sbo: SBO:0000247
  - !!omap
    - id: msa_c
    - name: 3-oxopropanoate
    - compartment: c
    - charge: -1.0
    - formula: C3H3O3
    - annotation: !!omap
      - biggr: msa_c:-1
      - chebi:
        - CHEBI:33190
      - sbo: SBO:0000247
  - !!omap
    - id: pser_p
    - name: O-phosphonato-L-serine(2-)
    - compartment: p
    - charge: -2.0
    - formula: C3H6NO6P
    - annotation: !!omap
      - biggr: pser_p:-2
      - chebi:
        - CHEBI:57524
      - sbo: SBO:0000247
  - !!omap
    - id: slnt_c
    - name: selenite(2-)
    - compartment: c
    - charge: -2.0
    - formula: O3Se
    - annotation: !!omap
      - biggr: slnt_c:-2
      - chebi:
        - CHEBI:18212
      - sbo: SBO:0000247
  - !!omap
    - id: isetac_e
    - name: isethionate
    - compartment: e
    - charge: -1.0
    - formula: C2H5O4S
    - annotation: !!omap
      - biggr: isetac_e:-1
      - chebi:
        - CHEBI:61904
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dhbzs_p
    - name: Ferric 2,3-dihydroxybenzoylserine
    - compartment: p
    - charge: 2.0
    - formula: C10H10NO6Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dhbzs_p:2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpgn_c
    - name: Coprogen
    - compartment: c
    - charge: -1.0
    - formula: C35H52N6O13Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpgn_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__butACP_c
    - name: Butyryl-ACP (n-C4:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C15H27N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__butACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__metglcur_e
    - name: 1-O-methyl-Beta-D-glucuronate
    - compartment: e
    - charge: -1.0
    - formula: C7H11O7
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__metglcur_e:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cu_e
    - name: copper(1+)
    - compartment: e
    - charge: 1.0
    - formula: Cu
    - annotation: !!omap
      - biggr: cu_e:1
      - chebi:
        - CHEBI:49552
      - sbo: SBO:0000247
  - !!omap
    - id: dgsn_c
    - name: 2'-deoxyguanosine
    - compartment: c
    - charge: 0.0
    - formula: C10H13N5O4
    - annotation: !!omap
      - biggr: dgsn_c:0
      - chebi:
        - CHEBI:17172
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1hdec9eg3p_c
    - name: 1-hexadec-9-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C19H35O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1hdec9eg3p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdtdecg_c
    - name: CDP-1,2-ditetradecanoylglycerol
    - compartment: c
    - charge: -2.0
    - formula: C40H71N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdtdecg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe181_c
    - name: Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)
    - compartment: c
    - charge: 0.0
    - formula: C41H78N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe181_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: dttp_c
    - name: dTTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H13N2O14P3
    - annotation: !!omap
      - biggr: dttp_c:-4
      - chebi:
        - CHEBI:37568
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe120_c
    - name: Phosphatidylethanolamine (didodecanoyl, n-C12:0)
    - compartment: c
    - charge: 0.0
    - formula: C29H58N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe120_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: but_c
    - name: butyrate
    - compartment: c
    - charge: -1.0
    - formula: C4H7O2
    - annotation: !!omap
      - biggr: but_c:-1
      - chebi:
        - CHEBI:17968
      - sbo: SBO:0000247
  - !!omap
    - id: pe160_p
    - name: 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C37H74NO8P
    - annotation: !!omap
      - biggr: pe160_p:0
      - chebi:
        - CHEBI:73005
        - CHEBI:73127
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg160_p
    - name: Phosphatidylglycerol (dihexadecanoyl, n-C16:0)
    - compartment: p
    - charge: -1.0
    - formula: C38H74O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg160_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg160_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0)
    - compartment: c
    - charge: -1.0
    - formula: C22H44O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg160_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__glutrna_c
    - name: L-Glutamyl-tRNA(Glu)
    - compartment: c
    - charge: 0.0
    - formula: C5H7NO3R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__glutrna_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa120_p
    - name: 1,2-didodecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C27H51O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa120_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: adn_e
    - name: adenosine
    - compartment: e
    - charge: 0.0
    - formula: C10H13N5O4
    - annotation: !!omap
      - biggr: adn_e:0
      - chebi:
        - CHEBI:16335
      - sbo: SBO:0000247
  - !!omap
    - id: 3otdcoa_c
    - name: 3-oxotetradecanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C35H56N7O18P3S
    - annotation: !!omap
      - biggr: 3otdcoa_c:-4
      - chebi:
        - CHEBI:62543
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ddcap_c
    - name: Dodecanoly-phosphate (n-C12:0)
    - compartment: c
    - charge: -1.0
    - formula: C12H24O5P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ddcap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 3hhdcoa_c
    - name: (S)-3-hydroxypalmitoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C37H62N7O18P3S
    - annotation: !!omap
      - biggr: 3hhdcoa_c:-4
      - chebi:
        - CHEBI:62613
      - sbo: SBO:0000247
  - !!omap
    - id: octdp_c
    - name: all-trans-octaprenyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C40H65O7P2
    - annotation: !!omap
      - biggr: octdp_c:-3
      - chebi:
        - CHEBI:57711
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hdcap_c
    - name: Hexadecanoyl-phosphate (n-C16:0)
    - compartment: c
    - charge: -1.0
    - formula: C16H32O5P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hdcap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cinnm_c
    - name: trans-cinnamate
    - compartment: c
    - charge: -1.0
    - formula: C9H7O2
    - annotation: !!omap
      - biggr: cinnm_c:-1
      - chebi:
        - CHEBI:15669
      - sbo: SBO:0000247
  - !!omap
    - id: hx2coa_c
    - name: trans-hex-2-enoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C27H40N7O17P3S
    - annotation: !!omap
      - biggr: hx2coa_c:-4
      - chebi:
        - CHEBI:62077
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__egmeACP_c
    - name: Enoylglutaryl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C17H27N2O10PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__egmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: uacmam_c
    - name: UDP-N-acetyl-alpha-D-mannosamine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C17H25N3O17P2
    - annotation: !!omap
      - biggr: uacmam_c:-2
      - chebi:
        - CHEBI:68623
      - sbo: SBO:0000247
  - !!omap
    - id: arbt6p_c
    - name: arbutin 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C12H15O10P
    - annotation: !!omap
      - biggr: arbt6p_c:-2
      - chebi:
        - CHEBI:60929
      - sbo: SBO:0000247
  - !!omap
    - id: cph4_c
    - name: 5,6,7,8-tetrahydropterin-6-carboxylate
    - compartment: c
    - charge: -1.0
    - formula: C7H8N5O3
    - annotation: !!omap
      - biggr: cph4_c:-1
      - chebi:
        - CHEBI:61032
      - sbo: SBO:0000247
  - !!omap
    - id: ttdca_c
    - name: tetradecanoate
    - compartment: c
    - charge: -1.0
    - formula: C14H27O2
    - annotation: !!omap
      - biggr: ttdca_c:-1
      - chebi:
        - CHEBI:30807
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__glycogen_c
    - name: Glycogen C6H10O5
    - compartment: c
    - charge: 0.0
    - formula: C6H10O5
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__glycogen_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iscu_2fe2s2_c
    - name: IscU with two bound [2Fe-2S] clusters
    - compartment: c
    - charge: -4.0
    - formula: O2S10Fe4R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iscu_2fe2s2_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: ahcys_c
    - name: S-adenosyl-L-homocysteine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C14H20N6O5S
    - annotation: !!omap
      - biggr: ahcys_c:0
      - chebi:
        - CHEBI:57856
        - CHEBI:16680
      - sbo: SBO:0000247
  - !!omap
    - id: pydx_c
    - name: pyridoxal
    - compartment: c
    - charge: 0.0
    - formula: C8H9NO3
    - annotation: !!omap
      - biggr: pydx_c:0
      - chebi:
        - CHEBI:17310
      - sbo: SBO:0000247
  - !!omap
    - id: tmam_p
    - name: trimethylammonium
    - compartment: p
    - charge: 1.0
    - formula: C3H10N
    - annotation: !!omap
      - biggr: tmam_p:1
      - chebi:
        - CHEBI:58389
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dcit_e
    - name: Fe(III)dicitrate
    - compartment: e
    - charge: -3.0
    - formula: C12H10FeO14
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dcit_e:-3
      - sbo: SBO:0000247
  - !!omap
    - id: thmnp_c
    - name: tetrahydromonapterin
    - compartment: c
    - charge: 0.0
    - formula: C9H15N5O4
    - annotation: !!omap
      - biggr: thmnp_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3hox_un_c
    - name: Fe(III)hydoxamate, unloaded
    - compartment: c
    - charge: -3.0
    - formula: C9H18O6N3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3hox_un_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: lac__D_e
    - name: (R)-lactate
    - compartment: e
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: lac__D_e:-1
      - chebi:
        - CHEBI:16004
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__trdox_c
    - name: Oxidized thioredoxin
    - compartment: c
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__trdox_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 2mcacn_c
    - name: (Z)-but-2-ene-1,2,3-tricarboxylate
    - compartment: c
    - charge: -3.0
    - formula: C7H5O6
    - annotation: !!omap
      - biggr: 2mcacn_c:-3
      - chebi:
        - CHEBI:57872
      - sbo: SBO:0000247
  - !!omap
    - id: damp_e
    - name: 2'-deoxyadenosine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H12N5O6P
    - annotation: !!omap
      - biggr: damp_e:-2
      - chebi:
        - CHEBI:58245
      - sbo: SBO:0000247
  - !!omap
    - id: 5mtr_c
    - name: S-methyl-5-thio-D-ribofuranose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O4S
    - annotation: !!omap
      - biggr: 5mtr_c:0
      - chebi:
        - CHEBI:78440
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16a4und_p
    - name: (O16 antigen)x4 undecaprenyl diphosphate
    - compartment: p
    - charge: -2.0
    - formula: C191H310N4O107P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16a4und_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: aconm_c
    - name: (2E)-3-(methoxycarbonyl)pent-2-enedioate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H6O6
    - annotation: !!omap
      - biggr: aconm_c:-2
      - chebi:
        - CHEBI:57470
      - sbo: SBO:0000247
  - !!omap
    - id: adn_p
    - name: adenosine
    - compartment: p
    - charge: 0.0
    - formula: C10H13N5O4
    - annotation: !!omap
      - biggr: adn_p:0
      - chebi:
        - CHEBI:16335
      - sbo: SBO:0000247
  - !!omap
    - id: 3ig3p_c
    - name: (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C11H12NO6P
    - annotation: !!omap
      - biggr: 3ig3p_c:-2
      - chebi:
        - CHEBI:58866
      - sbo: SBO:0000247
  - !!omap
    - id: asn__L_p
    - name: L-asparagine
    - compartment: p
    - charge: 0.0
    - formula: C4H8N2O3
    - annotation: !!omap
      - biggr: asn__L_p:0
      - chebi:
        - CHEBI:58048
        - CHEBI:17196
      - sbo: SBO:0000247
  - !!omap
    - id: n2o_c
    - name: dinitrogen oxide
    - compartment: c
    - charge: 0.0
    - formula: N2O
    - annotation: !!omap
      - biggr: n2o_c:0
      - chebi:
        - CHEBI:17045
      - sbo: SBO:0000247
  - !!omap
    - id: sl26da_c
    - name: N-(3-carboxylatopropionyl)-LL-2,6-diaminopimelate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C11H16N2O7
    - annotation: !!omap
      - biggr: sl26da_c:-2
      - chebi:
        - CHEBI:58087
      - sbo: SBO:0000247
  - !!omap
    - id: hg2_e
    - name: mercury(2+)
    - compartment: e
    - charge: 2.0
    - formula: Hg
    - annotation: !!omap
      - biggr: hg2_e:2
      - chebi:
        - CHEBI:16793
      - sbo: SBO:0000247
  - !!omap
    - id: dgsn_p
    - name: 2'-deoxyguanosine
    - compartment: p
    - charge: 0.0
    - formula: C10H13N5O4
    - annotation: !!omap
      - biggr: dgsn_p:0
      - chebi:
        - CHEBI:17172
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hoctACP_c
    - name: (R)-3-Hydroxyoctanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C19H35N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hoctACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dctp_c
    - name: dCTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C9H12N3O13P3
    - annotation: !!omap
      - biggr: dctp_c:-4
      - chebi:
        - CHEBI:61481
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__toctd2eACP_c
    - name: Trans-octadec-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C29H53N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__toctd2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: manglyc_p
    - name: 2-(alpha-D-mannosyl)-D-glycerate
    - compartment: p
    - charge: -1.0
    - formula: C9H15O9
    - annotation: !!omap
      - biggr: manglyc_p:-1
      - chebi:
        - CHEBI:57541
      - sbo: SBO:0000247
  - !!omap
    - id: dms_p
    - name: dimethyl sulfide
    - compartment: p
    - charge: 0.0
    - formula: C2H6S
    - annotation: !!omap
      - biggr: dms_p:0
      - chebi:
        - CHEBI:17437
      - sbo: SBO:0000247
  - !!omap
    - id: din_c
    - name: 2'-deoxyinosine
    - compartment: c
    - charge: 0.0
    - formula: C10H12N4O4
    - annotation: !!omap
      - biggr: din_c:0
      - chebi:
        - CHEBI:28997
      - sbo: SBO:0000247
  - !!omap
    - id: h2s_p
    - name: hydrogen sulfide
    - compartment: p
    - charge: 0.0
    - formula: H2S
    - annotation: !!omap
      - biggr: h2s_p:0
      - chebi:
        - CHEBI:16136
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbcox_p
    - name: Protein disulfide isomerase II (oxidized)
    - compartment: p
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbcox_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: ichor_c
    - name: isochorismate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H8O6
    - annotation: !!omap
      - biggr: ichor_c:-2
      - chebi:
        - CHEBI:29780
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn160_p
    - name: Cardiolipin (tetrahexadecanoyl, n-C16:0)
    - compartment: p
    - charge: -2.0
    - formula: C73H140O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn160_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn181_p
    - name: Cardiolipin (tetraoctadec-11-enoyl, n-C18:1)
    - compartment: p
    - charge: -2.0
    - formula: C81H148O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn181_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feoxam_e
    - name: Generic ferrioxamine-Fe-III
    - compartment: e
    - charge: 1.0
    - formula: C25H46FeN6O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feoxam_e:1
      - sbo: SBO:0000247
  - !!omap
    - id: lipoate_e
    - name: (R)-lipoic acid
    - compartment: e
    - charge: 0.0
    - formula: C8H14O2S2
    - annotation: !!omap
      - biggr: lipoate_e:0
      - chebi:
        - CHEBI:30314
      - sbo: SBO:0000247
  - !!omap
    - id: pacald_c
    - name: phenylacetaldehyde
    - compartment: c
    - charge: 0.0
    - formula: C8H8O
    - annotation: !!omap
      - biggr: pacald_c:0
      - chebi:
        - CHEBI:16424
      - sbo: SBO:0000247
  - !!omap
    - id: arbt_p
    - name: hydroquinone O-beta-D-glucopyranoside
    - compartment: p
    - charge: 0.0
    - formula: C12H16O7
    - annotation: !!omap
      - biggr: arbt_p:0
      - chebi:
        - CHEBI:18305
      - sbo: SBO:0000247
  - !!omap
    - id: cpppg3_c
    - name: coproporphyrinogen III(4-)
    - compartment: c
    - charge: -4.0
    - formula: C36H40N4O8
    - annotation: !!omap
      - biggr: cpppg3_c:-4
      - chebi:
        - CHEBI:57309
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ttdceap_c
    - name: Tetradecanoyl-phosphate (n-C14:1)
    - compartment: c
    - charge: -1.0
    - formula: C14H26O5P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ttdceap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpmp_c
    - name: Cyclic pyranopterin monophosphate
    - compartment: c
    - charge: -1.0
    - formula: C10H13N5O8P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpmp_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: isetac_c
    - name: isethionate
    - compartment: c
    - charge: -1.0
    - formula: C2H5O4S
    - annotation: !!omap
      - biggr: isetac_c:-1
      - chebi:
        - CHEBI:61904
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm4p_c
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide
    - compartment: c
    - charge: -2.0
    - formula: C37H57N7O20
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm4p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 3ohcoa_c
    - name: 3-oxohexanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C27H40N7O18P3S
    - annotation: !!omap
      - biggr: 3ohcoa_c:-4
      - chebi:
        - CHEBI:62418
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__gggagicolipa_c
    - name: Glucosyl-glucosyl-galactosyl-glucosyl-inner core oligosaccharide 
        lipid A
    - compartment: c
    - charge: -11.0
    - formula: C169H291N2O94P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__gggagicolipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: doxrbcn_e
    - name: doxorubicin
    - compartment: e
    - charge: 0.0
    - formula: C27H29NO11
    - annotation: !!omap
      - biggr: doxrbcn_e:0
      - chebi:
        - CHEBI:28748
      - sbo: SBO:0000247
  - !!omap
    - id: dxylnt_p
    - name: D-xylonate
    - compartment: p
    - charge: -1.0
    - formula: C5H9O6
    - annotation: !!omap
      - biggr: dxylnt_p:-1
      - chebi:
        - CHEBI:17746
      - sbo: SBO:0000247
  - !!omap
    - id: ser__D_e
    - name: D-serine
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO3
    - annotation: !!omap
      - biggr: ser__D_e:0
      - chebi:
        - CHEBI:35247
        - CHEBI:16523
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2hptcoa_c
    - name: 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA
    - compartment: c
    - charge: -5.0
    - formula: C29H37N7P3S1O18
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2hptcoa_c:-5
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__grxrd_c
    - name: Glutaredoxin (reduced)
    - compartment: c
    - charge: 0.0
    - formula: XH2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__grxrd_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: so2_e
    - name: sulfur dioxide
    - compartment: e
    - charge: 0.0
    - formula: O2S
    - annotation: !!omap
      - biggr: so2_e:0
      - chebi:
        - CHEBI:18422
      - sbo: SBO:0000247
  - !!omap
    - id: ohpb_c
    - name: (R)-3-hydroxy-2-oxo-4-(phosphonatoooxy)butanoate
    - compartment: c
    - charge: -3.0
    - formula: C4H4O8P
    - annotation: !!omap
      - biggr: ohpb_c:-3
      - chebi:
        - CHEBI:58538
      - sbo: SBO:0000247
  - !!omap
    - id: cys__D_c
    - name: D-cysteine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__D_c:0
      - chebi:
        - CHEBI:35236
        - CHEBI:16375
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa161_c
    - name: 1,2-dihexadec-9-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C35H63O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa161_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: ru5p__D_c
    - name: D-ribulose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: ru5p__D_c:-2
      - chebi:
        - CHEBI:58121
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhmb_c
    - name: (R)-2,3-dihydroxy-3-methylbutanoate
    - compartment: c
    - charge: -1.0
    - formula: C5H9O4
    - annotation: !!omap
      - biggr: 23dhmb_c:-1
      - chebi:
        - CHEBI:49072
      - sbo: SBO:0000247
  - !!omap
    - id: amp_e
    - name: adenosine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: amp_e:-2
      - chebi:
        - CHEBI:456215
      - sbo: SBO:0000247
  - !!omap
    - id: galur_c
    - name: aldehydo-D-galacturonate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: galur_c:-1
      - chebi:
        - CHEBI:12952
      - sbo: SBO:0000247
  - !!omap
    - id: arab__L_e
    - name: aldehydo-L-arabinose
    - compartment: e
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: arab__L_e:0
      - chebi:
        - CHEBI:6182
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp140_c
    - name: Phosphatidylglycerophosphate (ditetradecanoyl, n-C14:0)
    - compartment: c
    - charge: -3.0
    - formula: C34H65O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp140_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: o2s_c
    - name: superoxide
    - compartment: c
    - charge: -1.0
    - formula: O2
    - annotation: !!omap
      - biggr: o2s_c:-1
      - chebi:
        - CHEBI:18421
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp161_c
    - name: Phosphatidylglycerophosphate (dihexadec-9-enoyl, n-C16:1)
    - compartment: c
    - charge: -3.0
    - formula: C38H69O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp161_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps180_c
    - name: Phosphatidylserine (dioctadecanoyl, n-C18:0)
    - compartment: c
    - charge: -1.0
    - formula: C42H81N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps180_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: lald__L_c
    - name: (S)-lactaldehyde
    - compartment: c
    - charge: 0.0
    - formula: C3H6O2
    - annotation: !!omap
      - biggr: lald__L_c:0
      - chebi:
        - CHEBI:18041
      - sbo: SBO:0000247
  - !!omap
    - id: ugmd_c
    - name: 
        UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C35H51N7O26P2
    - annotation: !!omap
      - biggr: ugmd_c:-4
      - chebi:
        - CHEBI:83905
      - sbo: SBO:0000247
  - !!omap
    - id: 2ahhmp_c
    - name: 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol
    - compartment: c
    - charge: 0.0
    - formula: C7H9N5O2
    - annotation: !!omap
      - biggr: 2ahhmp_c:0
      - chebi:
        - CHEBI:44841
        - CHEBI:17083
      - sbo: SBO:0000247
  - !!omap
    - id: ppcoa_c
    - name: propionyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C24H36N7O17P3S
    - annotation: !!omap
      - biggr: ppcoa_c:-4
      - chebi:
        - CHEBI:57392
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe141_c
    - name: Phosphatidylethanolamine (ditetradec-7-enoyl, n-C14:1)
    - compartment: c
    - charge: 0.0
    - formula: C33H62N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe141_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpg160_c
    - name: Cyclopropane phosphatidylglycerol (dihexadec-9,10-cyclo-anoyl, 
        n-C16:0 cyclo)
    - compartment: c
    - charge: -1.0
    - formula: C40H74O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpg160_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fecrm_c
    - name: Ferrichrome
    - compartment: c
    - charge: 0.0
    - formula: C27H42FeN9O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fecrm_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: adocbi_c
    - name: adenosylcobinamide
    - compartment: c
    - charge: 1.0
    - formula: C58H84CoN16O11
    - annotation: !!omap
      - biggr: adocbi_c:1
      - chebi:
        - CHEBI:2480
      - sbo: SBO:0000247
  - !!omap
    - id: ile__L_p
    - name: L-isoleucine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C6H13NO2
    - annotation: !!omap
      - biggr: ile__L_p:0
      - chebi:
        - CHEBI:58045
        - CHEBI:17191
      - sbo: SBO:0000247
  - !!omap
    - id: acac_c
    - name: acetoacetate
    - compartment: c
    - charge: -1.0
    - formula: C4H5O3
    - annotation: !!omap
      - biggr: acac_c:-1
      - chebi:
        - CHEBI:13705
      - sbo: SBO:0000247
  - !!omap
    - id: crn__D_e
    - name: (S)-carnitine
    - compartment: e
    - charge: 0.0
    - formula: C7H15NO3
    - annotation: !!omap
      - biggr: crn__D_e:0
      - chebi:
        - CHEBI:11060
      - sbo: SBO:0000247
  - !!omap
    - id: acmanap_c
    - name: N-acetyl-D-mannopyranosamine 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acmanap_c:-2
      - chebi:
        - CHEBI:232428
      - sbo: SBO:0000247
  - !!omap
    - id: nmn_p
    - name: NMN(-)
    - compartment: p
    - charge: -1.0
    - formula: C11H14N2O8P
    - annotation: !!omap
      - biggr: nmn_p:-1
      - chebi:
        - CHEBI:14649
      - sbo: SBO:0000247
  - !!omap
    - id: pppn_e
    - name: 3-phenylpropionate
    - compartment: e
    - charge: -1.0
    - formula: C9H9O2
    - annotation: !!omap
      - biggr: pppn_e:-1
      - chebi:
        - CHEBI:51057
      - sbo: SBO:0000247
  - !!omap
    - id: 13ppd_c
    - name: propane-1,3-diol
    - compartment: c
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 13ppd_c:0
      - chebi:
        - CHEBI:16109
      - sbo: SBO:0000247
  - !!omap
    - id: hxan_p
    - name: hypoxanthine
    - compartment: p
    - charge: 0.0
    - formula: C5H4N4O
    - annotation: !!omap
      - biggr: hxan_p:0
      - chebi:
        - CHEBI:17368
      - sbo: SBO:0000247
  - !!omap
    - id: pran_c
    - name: N-(5-phosphonato-beta-D-ribosyl)anthranilate
    - compartment: c
    - charge: -3.0
    - formula: C12H13NO9P
    - annotation: !!omap
      - biggr: pran_c:-3
      - chebi:
        - CHEBI:18277
      - sbo: SBO:0000247
  - !!omap
    - id: 3hcinnm_e
    - name: trans-3-coumarate
    - compartment: e
    - charge: -1.0
    - formula: C9H7O3
    - annotation: !!omap
      - biggr: 3hcinnm_e:-1
      - chebi:
        - CHEBI:47928
      - sbo: SBO:0000247
  - !!omap
    - id: gsn_c
    - name: guanosine
    - compartment: c
    - charge: 0.0
    - formula: C10H13N5O5
    - annotation: !!omap
      - biggr: gsn_c:0
      - chebi:
        - CHEBI:16750
      - sbo: SBO:0000247
  - !!omap
    - id: metsox_R__L_p
    - name: L-methionine (R)-S-oxide
    - compartment: p
    - charge: 0.0
    - formula: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_R__L_p:0
      - chebi:
        - CHEBI:58773
        - CHEBI:49032
      - sbo: SBO:0000247
  - !!omap
    - id: ins_c
    - name: inosine
    - compartment: c
    - charge: 0.0
    - formula: C10H12N4O5
    - annotation: !!omap
      - biggr: ins_c:0
      - chebi:
        - CHEBI:17596
      - sbo: SBO:0000247
  - !!omap
    - id: tmao_c
    - name: trimethylamine N-oxide
    - compartment: c
    - charge: 0.0
    - formula: C3H9NO
    - annotation: !!omap
      - biggr: tmao_c:0
      - chebi:
        - CHEBI:15724
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tsul_c
    - name: Thiosulfate
    - compartment: c
    - charge: -2.0
    - formula: O3S2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tsul_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 23cgmp_p
    - name: 2',3'-cyclic GMP(1-)
    - compartment: p
    - charge: -1.0
    - formula: C10H11N5O7P
    - annotation: !!omap
      - biggr: 23cgmp_p:-1
      - chebi:
        - CHEBI:60837
      - sbo: SBO:0000247
  - !!omap
    - id: man6pglyc_c
    - name: 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate
    - compartment: c
    - charge: -3.0
    - formula: C9H14O12P
    - annotation: !!omap
      - biggr: man6pglyc_c:-3
      - chebi:
        - CHEBI:60331
      - sbo: SBO:0000247
  - !!omap
    - id: ura_c
    - name: uracil
    - compartment: c
    - charge: 0.0
    - formula: C4H4N2O2
    - annotation: !!omap
      - biggr: ura_c:0
      - chebi:
        - CHEBI:17568
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__LalaDgluMdap_e
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate
    - compartment: e
    - charge: -1.0
    - formula: C15H25N4O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LalaDgluMdap_e:-1
      - sbo: SBO:0000247
  - !!omap
    - id: chol_e
    - name: choline
    - compartment: e
    - charge: 1.0
    - formula: C5H14NO
    - annotation: !!omap
      - biggr: chol_e:1
      - chebi:
        - CHEBI:15354
      - sbo: SBO:0000247
  - !!omap
    - id: gly_e
    - name: glycine
    - compartment: e
    - charge: 0.0
    - formula: C2H5NO2
    - annotation: !!omap
      - biggr: gly_e:0
      - chebi:
        - CHEBI:57305
        - CHEBI:15428
      - sbo: SBO:0000247
  - !!omap
    - id: oxam_c
    - name: oxamate
    - compartment: c
    - charge: -1.0
    - formula: C2H2NO3
    - annotation: !!omap
      - biggr: oxam_c:-1
      - chebi:
        - CHEBI:58363
      - sbo: SBO:0000247
  - !!omap
    - id: dha_p
    - name: dihydroxyacetone
    - compartment: p
    - charge: 0.0
    - formula: C3H6O3
    - annotation: !!omap
      - biggr: dha_p:0
      - chebi:
        - CHEBI:16016
      - sbo: SBO:0000247
  - !!omap
    - id: cgly_p
    - name: L-cysteinylglycine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C5H10N2O3S
    - annotation: !!omap
      - biggr: cgly_p:0
      - chebi:
        - CHEBI:61694
        - CHEBI:4047
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__LalaDgluMdapDala_c
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine
    - compartment: c
    - charge: -1.0
    - formula: C18H30N5O9
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LalaDgluMdapDala_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 8aonn_c
    - name: (8S)-8-amino-7-oxononanoic acid zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C9H17NO3
    - annotation: !!omap
      - biggr: 8aonn_c:0
      - chebi:
        - CHEBI:149468
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2hdecg3p_c
    - name: 2-hexadecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C19H38O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2hdecg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pdx5p_c
    - name: pyridoxine 5'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C8H10NO6P
    - annotation: !!omap
      - biggr: pdx5p_c:-2
      - chebi:
        - CHEBI:58589
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__colipa_p
    - name: Core oligosaccharide lipid A
    - compartment: p
    - charge: -11.0
    - formula: C176H303N2O100P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__colipa_p:-11
      - sbo: SBO:0000247
  - !!omap
    - id: 23doguln_c
    - name: 2,3-diketogulonate
    - compartment: c
    - charge: -1.0
    - formula: C6H7O7
    - annotation: !!omap
      - biggr: 23doguln_c:-1
      - chebi:
        - CHEBI:57441
      - sbo: SBO:0000247
  - !!omap
    - id: 1agpg160_p
    - name: 1-hexadecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol)(1-)
    - compartment: p
    - charge: -1.0
    - formula: C22H44O9P
    - annotation: !!omap
      - biggr: 1agpg160_p:-1
      - chebi:
        - CHEBI:75158
      - sbo: SBO:0000247
  - !!omap
    - id: tmao_e
    - name: trimethylamine N-oxide
    - compartment: e
    - charge: 0.0
    - formula: C3H9NO
    - annotation: !!omap
      - biggr: tmao_e:0
      - chebi:
        - CHEBI:15724
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__colipa_e
    - name: Core oligosaccharide lipid A
    - compartment: e
    - charge: -11.0
    - formula: C176H303N2O100P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__colipa_e:-11
      - sbo: SBO:0000247
  - !!omap
    - id: glyc2p_p
    - name: glycerol 2-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C3H7O6P
    - annotation: !!omap
      - biggr: glyc2p_p:-2
      - chebi:
        - CHEBI:58083
      - sbo: SBO:0000247
  - !!omap
    - id: 4abzglu_p
    - name: N-(4-aminobenzoyl)-L-glutamate
    - compartment: p
    - charge: -2.0
    - formula: C12H12N2O5
    - annotation: !!omap
      - biggr: 4abzglu_p:-2
      - chebi:
        - CHEBI:60903
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe141_p
    - name: Phosphatidylethanolamine (ditetradec-7-enoyl, n-C14:1)
    - compartment: p
    - charge: 0.0
    - formula: C33H62N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe141_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: acac_p
    - name: acetoacetate
    - compartment: p
    - charge: -1.0
    - formula: C4H5O3
    - annotation: !!omap
      - biggr: acac_p:-1
      - chebi:
        - CHEBI:13705
      - sbo: SBO:0000247
  - !!omap
    - id: 34dhpha_c
    - name: (3,4-dihydroxyphenyl)acetate
    - compartment: c
    - charge: -1.0
    - formula: C8H7O4
    - annotation: !!omap
      - biggr: 34dhpha_c:-1
      - chebi:
        - CHEBI:17612
      - sbo: SBO:0000247
  - !!omap
    - id: but_p
    - name: butyrate
    - compartment: p
    - charge: -1.0
    - formula: C4H7O2
    - annotation: !!omap
      - biggr: but_p:-1
      - chebi:
        - CHEBI:17968
      - sbo: SBO:0000247
  - !!omap
    - id: 34dhpac_p
    - name: 3,4-dihydroxyphenylacetaldehyde
    - compartment: p
    - charge: 0.0
    - formula: C8H8O3
    - annotation: !!omap
      - biggr: 34dhpac_p:0
      - chebi:
        - CHEBI:27978
      - sbo: SBO:0000247
  - !!omap
    - id: lipa_e
    - name: (Kdo)2-lipid A(6-) (E. coli)
    - compartment: e
    - charge: -6.0
    - formula: C110H196N2O39P2
    - annotation: !!omap
      - biggr: lipa_e:-6
      - chebi:
        - CHEBI:58540
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe181_p
    - name: Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)
    - compartment: p
    - charge: 0.0
    - formula: C41H78N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe181_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr140_p
    - name: 1,2 ditetradecanoylglycerol
    - compartment: p
    - charge: 0.0
    - formula: C31H60O5
    - annotation: !!omap
      - biggr: 12dgr140_p:0
      - chebi:
        - CHEBI:83320
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2hdecg3p_p
    - name: 2-hexadecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C19H38O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2hdecg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: glcn_c
    - name: D-gluconate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: glcn_c:-1
      - chebi:
        - CHEBI:18391
      - sbo: SBO:0000247
  - !!omap
    - id: oxadpcoa_c
    - name: 3-oxoadipyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C27H37N7O20P3S
    - annotation: !!omap
      - biggr: oxadpcoa_c:-5
      - chebi:
        - CHEBI:57348
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__enlipa_e
    - name: Phosphoethanolamine KDO(2)-lipid (A)
    - compartment: e
    - charge: -6.0
    - formula: C112H202N3O42P3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__enlipa_e:-6
      - sbo: SBO:0000247
  - !!omap
    - id: n2o_e
    - name: dinitrogen oxide
    - compartment: e
    - charge: 0.0
    - formula: N2O
    - annotation: !!omap
      - biggr: n2o_e:0
      - chebi:
        - CHEBI:17045
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__mptamp_c
    - name: Adenylated molybdopterin
    - compartment: c
    - charge: -2.0
    - formula: C20H22N10O12P2S2Cu
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__mptamp_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: paps_c
    - name: 3'-phosphonato-5'-adenylyl sulfate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H11N5O13P2S
    - annotation: !!omap
      - biggr: paps_c:-4
      - chebi:
        - CHEBI:58339
      - sbo: SBO:0000247
  - !!omap
    - id: cobalt2_c
    - name: cobalt(2+)
    - compartment: c
    - charge: 2.0
    - formula: Co
    - annotation: !!omap
      - biggr: cobalt2_c:2
      - chebi:
        - CHEBI:48828
      - sbo: SBO:0000247
  - !!omap
    - id: utp_c
    - name: UTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C9H11N2O15P3
    - annotation: !!omap
      - biggr: utp_c:-4
      - chebi:
        - CHEBI:46398
      - sbo: SBO:0000247
  - !!omap
    - id: cobalt2_p
    - name: cobalt(2+)
    - compartment: p
    - charge: 2.0
    - formula: Co
    - annotation: !!omap
      - biggr: cobalt2_p:2
      - chebi:
        - CHEBI:48828
      - sbo: SBO:0000247
  - !!omap
    - id: dhor__S_c
    - name: (S)-dihydroorotate
    - compartment: c
    - charge: -1.0
    - formula: C5H5N2O4
    - annotation: !!omap
      - biggr: dhor__S_c:-1
      - chebi:
        - CHEBI:30864
      - sbo: SBO:0000247
  - !!omap
    - id: mmet_p
    - name: S-methyl-L-methionine
    - compartment: p
    - charge: 1.0
    - formula: C6H14NO2S
    - annotation: !!omap
      - biggr: mmet_p:1
      - chebi:
        - CHEBI:58252
        - CHEBI:17728
      - sbo: SBO:0000247
  - !!omap
    - id: aso3_e
    - name: arsenite(3-)
    - compartment: e
    - charge: -3.0
    - formula: AsO3
    - annotation: !!omap
      - biggr: aso3_e:-3
      - chebi:
        - CHEBI:29866
      - sbo: SBO:0000247
  - !!omap
    - id: glyc_e
    - name: glycerol
    - compartment: e
    - charge: 0.0
    - formula: C3H8O3
    - annotation: !!omap
      - biggr: glyc_e:0
      - chebi:
        - CHEBI:17754
      - sbo: SBO:0000247
  - !!omap
    - id: adn_c
    - name: adenosine
    - compartment: c
    - charge: 0.0
    - formula: C10H13N5O4
    - annotation: !!omap
      - biggr: adn_c:0
      - chebi:
        - CHEBI:16335
      - sbo: SBO:0000247
  - !!omap
    - id: 4mop_c
    - name: 4-methyl-2-oxopentanoate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O3
    - annotation: !!omap
      - biggr: 4mop_c:-1
      - chebi:
        - CHEBI:17865
      - sbo: SBO:0000247
  - !!omap
    - id: gal1p_c
    - name: alpha-D-galactose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: gal1p_c:-2
      - chebi:
        - CHEBI:58336
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbgox_p
    - name: Periplasmic disulfide isomerase/thiol-disulphide oxidase (oxidized)
    - compartment: p
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbgox_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: 2me4p_c
    - name: 2-C-methyl-D-erythritol 4-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H11O7P
    - annotation: !!omap
      - biggr: 2me4p_c:-2
      - chebi:
        - CHEBI:58262
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg140_p
    - name: Phosphatidylglycerol (ditetradecanoyl, n-C14:0)
    - compartment: p
    - charge: -1.0
    - formula: C34H66O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg140_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dann_c
    - name: (7R,8S)-7,8-diammoniononanoate
    - compartment: c
    - charge: 1.0
    - formula: C9H21N2O2
    - annotation: !!omap
      - biggr: dann_c:1
      - chebi:
        - CHEBI:149469
      - sbo: SBO:0000247
  - !!omap
    - id: tre_c
    - name: alpha,alpha-trehalose
    - compartment: c
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: tre_c:0
      - chebi:
        - CHEBI:16551
      - sbo: SBO:0000247
  - !!omap
    - id: gdpmann_c
    - name: GDP-alpha-D-mannose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H23N5O16P2
    - annotation: !!omap
      - biggr: gdpmann_c:-2
      - chebi:
        - CHEBI:57527
      - sbo: SBO:0000247
  - !!omap
    - id: 2h3opp_c
    - name: 2-hydroxy-3-oxopropanoate
    - compartment: c
    - charge: -1.0
    - formula: C3H3O4
    - annotation: !!omap
      - biggr: 2h3opp_c:-1
      - chebi:
        - CHEBI:57978
      - sbo: SBO:0000247
  - !!omap
    - id: hpyr_c
    - name: 3-hydroxypyruvate
    - compartment: c
    - charge: -1.0
    - formula: C3H3O4
    - annotation: !!omap
      - biggr: hpyr_c:-1
      - chebi:
        - CHEBI:17180
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg181_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)
    - compartment: c
    - charge: -1.0
    - formula: C24H46O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg181_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg120_c
    - name: Acyl phosphatidylglycerol (n-C12:0)
    - compartment: c
    - charge: -1.0
    - formula: C42H80O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg120_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg160_c
    - name: Acyl phosphatidylglycerol (n-C16:0)
    - compartment: c
    - charge: -1.0
    - formula: C54H104O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg160_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dad_2_e
    - name: 2'-deoxyadenosine
    - compartment: e
    - charge: 0.0
    - formula: C10H13N5O3
    - annotation: !!omap
      - biggr: dad_2_e:0
      - chebi:
        - CHEBI:17256
      - sbo: SBO:0000247
  - !!omap
    - id: mchtbs6p_c
    - name: N'-monoacetylchitobiose-6'-phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C14H26N2O13P
    - annotation: !!omap
      - biggr: mchtbs6p_c:-1
      - chebi:
        - CHEBI:71315
      - sbo: SBO:0000247
  - !!omap
    - id: fdp_c
    - name: beta-D-fructofuranose 1,6-bisphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C6H10O12P2
    - annotation: !!omap
      - biggr: fdp_c:-4
      - chebi:
        - CHEBI:32966
      - sbo: SBO:0000247
  - !!omap
    - id: mthgxl_c
    - name: methylglyoxal
    - compartment: c
    - charge: 0.0
    - formula: C3H4O2
    - annotation: !!omap
      - biggr: mthgxl_c:0
      - chebi:
        - CHEBI:17158
      - sbo: SBO:0000247
  - !!omap
    - id: tartr__L_e
    - name: L-tartrate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H4O6
    - annotation: !!omap
      - biggr: tartr__L_e:-2
      - chebi:
        - CHEBI:30924
      - sbo: SBO:0000247
  - !!omap
    - id: cbi_c
    - name: cobinamide
    - compartment: c
    - charge: 0.0
    - formula: C48H72CoN11O8
    - annotation: !!omap
      - biggr: cbi_c:0
      - chebi:
        - CHEBI:28956
      - sbo: SBO:0000247
  - !!omap
    - id: octa_e
    - name: octanoate
    - compartment: e
    - charge: -1.0
    - formula: C8H15O2
    - annotation: !!omap
      - biggr: octa_e:-1
      - chebi:
        - CHEBI:25646
      - sbo: SBO:0000247
  - !!omap
    - id: thym_e
    - name: thymine
    - compartment: e
    - charge: 0.0
    - formula: C5H6N2O2
    - annotation: !!omap
      - biggr: thym_e:0
      - chebi:
        - CHEBI:17821
      - sbo: SBO:0000247
  - !!omap
    - id: gdp_e
    - name: GDP(3-)
    - compartment: e
    - charge: -3.0
    - formula: C10H12N5O11P2
    - annotation: !!omap
      - biggr: gdp_e:-3
      - chebi:
        - CHEBI:58189
      - sbo: SBO:0000247
  - !!omap
    - id: rmn_c
    - name: L-rhamnopyranose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: rmn_c:0
      - chebi:
        - CHEBI:62346
      - sbo: SBO:0000247
  - !!omap
    - id: dtmp_c
    - name: dTMP(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H13N2O8P
    - annotation: !!omap
      - biggr: dtmp_c:-2
      - chebi:
        - CHEBI:63528
      - sbo: SBO:0000247
  - !!omap
    - id: dmso_p
    - name: dimethyl sulfoxide
    - compartment: p
    - charge: 0.0
    - formula: C2H6OS
    - annotation: !!omap
      - biggr: dmso_p:0
      - chebi:
        - CHEBI:28262
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fecrm_p
    - name: Ferrichrome
    - compartment: p
    - charge: 0.0
    - formula: C27H42FeN9O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fecrm_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: gdp_p
    - name: GDP(3-)
    - compartment: p
    - charge: -3.0
    - formula: C10H12N5O11P2
    - annotation: !!omap
      - biggr: gdp_p:-3
      - chebi:
        - CHEBI:58189
      - sbo: SBO:0000247
  - !!omap
    - id: gdp_c
    - name: GDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H12N5O11P2
    - annotation: !!omap
      - biggr: gdp_c:-3
      - chebi:
        - CHEBI:58189
      - sbo: SBO:0000247
  - !!omap
    - id: ins_p
    - name: inosine
    - compartment: p
    - charge: 0.0
    - formula: C10H12N4O5
    - annotation: !!omap
      - biggr: ins_p:0
      - chebi:
        - CHEBI:17596
      - sbo: SBO:0000247
  - !!omap
    - id: man_c
    - name: D-mannopyranose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: man_c:0
      - chebi:
        - CHEBI:4208
      - sbo: SBO:0000247
  - !!omap
    - id: uaagmda_c
    - name: 
        undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine(4-)
    - compartment: c
    - charge: -4.0
    - formula: C95H152N8O28P2
    - annotation: !!omap
      - biggr: uaagmda_c:-4
      - chebi:
        - CHEBI:61388
      - sbo: SBO:0000247
  - !!omap
    - id: 4hoxpacd_e
    - name: (4-hydroxyphenyl)acetaldehyde
    - compartment: e
    - charge: 0.0
    - formula: C8H8O2
    - annotation: !!omap
      - biggr: 4hoxpacd_e:0
      - chebi:
        - CHEBI:15621
      - sbo: SBO:0000247
  - !!omap
    - id: acser_p
    - name: O-acetyl-L-serine
    - compartment: p
    - charge: 0.0
    - formula: C5H9NO4
    - annotation: !!omap
      - biggr: acser_p:0
      - chebi:
        - CHEBI:58340
        - CHEBI:17981
      - sbo: SBO:0000247
  - !!omap
    - id: k_c
    - name: potassium(1+)
    - compartment: c
    - charge: 1.0
    - formula: K
    - annotation: !!omap
      - biggr: k_c:1
      - chebi:
        - CHEBI:29103
      - sbo: SBO:0000247
  - !!omap
    - id: o2_p
    - name: dioxygen
    - compartment: p
    - charge: 0.0
    - formula: O2
    - annotation: !!omap
      - biggr: o2_p:0
      - chebi:
        - CHEBI:15379
      - sbo: SBO:0000247
  - !!omap
    - id: ala_B_p
    - name: beta-alanine
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala_B_p:0
      - chebi:
        - CHEBI:57966
        - CHEBI:16958
      - sbo: SBO:0000247
  - !!omap
    - id: cbi_e
    - name: cobinamide
    - compartment: e
    - charge: 0.0
    - formula: C48H72CoN11O8
    - annotation: !!omap
      - biggr: cbi_e:0
      - chebi:
        - CHEBI:28956
      - sbo: SBO:0000247
  - !!omap
    - id: tungs_p
    - name: tungstate
    - compartment: p
    - charge: -2.0
    - formula: O4W
    - annotation: !!omap
      - biggr: tungs_p:-2
      - chebi:
        - CHEBI:46502
      - sbo: SBO:0000247
  - !!omap
    - id: crn_e
    - name: (R)-carnitine
    - compartment: e
    - charge: 0.0
    - formula: C7H15NO3
    - annotation: !!omap
      - biggr: crn_e:0
      - chebi:
        - CHEBI:16347
      - sbo: SBO:0000247
  - !!omap
    - id: dtmp_e
    - name: dTMP(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H13N2O8P
    - annotation: !!omap
      - biggr: dtmp_e:-2
      - chebi:
        - CHEBI:63528
      - sbo: SBO:0000247
  - !!omap
    - id: fe2_c
    - name: iron(2+)
    - compartment: c
    - charge: 2.0
    - formula: Fe
    - annotation: !!omap
      - biggr: fe2_c:2
      - chebi:
        - CHEBI:29033
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdodecg_c
    - name: CDP-1,2-dioctadecanoylglycerol
    - compartment: c
    - charge: -2.0
    - formula: C48H87N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdodecg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps140_c
    - name: Phosphatidylserine (ditetradecanoyl, n-C14:0)
    - compartment: c
    - charge: -1.0
    - formula: C34H65N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps140_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr160_c
    - name: 1,2-dipalmitoyl-sn-glycerol
    - compartment: c
    - charge: 0.0
    - formula: C35H68O5
    - annotation: !!omap
      - biggr: 12dgr160_c:0
      - chebi:
        - CHEBI:82929
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2tdecg3p_c
    - name: 2-tetradecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C17H34O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2tdecg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: thm_e
    - name: thiamine(1+)
    - compartment: e
    - charge: 1.0
    - formula: C12H17N4OS
    - annotation: !!omap
      - biggr: thm_e:1
      - chebi:
        - CHEBI:18385
      - sbo: SBO:0000247
  - !!omap
    - id: glyald_e
    - name: D-glyceraldehyde
    - compartment: e
    - charge: 0.0
    - formula: C3H6O3
    - annotation: !!omap
      - biggr: glyald_e:0
      - chebi:
        - CHEBI:17378
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr181_c
    - name: 1,2-di-[(11Z)-octadecenoyl]glycerol
    - compartment: c
    - charge: 0.0
    - formula: C39H72O5
    - annotation: !!omap
      - biggr: 12dgr181_c:0
      - chebi:
        - CHEBI:131832
      - sbo: SBO:0000247
  - !!omap
    - id: indole_e
    - name: 3H-indole
    - compartment: e
    - charge: 0.0
    - formula: C8H7N
    - annotation: !!omap
      - biggr: indole_e:0
      - chebi:
        - CHEBI:16881
        - CHEBI:35579
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2tdec7eg3p_c
    - name: 2-tetradec-7-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C17H32O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2tdec7eg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbcrd_p
    - name: Protein disulfide isomerase II (reduced)
    - compartment: p
    - charge: 0.0
    - formula: XH2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbcrd_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bmocogdp_c
    - name: Bis-molybdopterin guanine dinucleotide
    - compartment: c
    - charge: -4.0
    - formula: C40H44N20O27P4S4Mo
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bmocogdp_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: mg2_e
    - name: magnesium(2+)
    - compartment: e
    - charge: 2.0
    - formula: Mg
    - annotation: !!omap
      - biggr: mg2_e:2
      - chebi:
        - CHEBI:18420
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp181_p
    - name: Phosphatidylglycerophosphate (dioctadec-11-enoyl, n-C18:1)
    - compartment: p
    - charge: -3.0
    - formula: C42H77O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp181_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: mththf_e
    - name: (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol
    - compartment: e
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: mththf_e:0
      - chebi:
        - CHEBI:44800
      - sbo: SBO:0000247
  - !!omap
    - id: dhptdp_c
    - name: (2S)-2-hydroxy-3,4-diketopentyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H7O7P
    - annotation: !!omap
      - biggr: dhptdp_c:-2
      - chebi:
        - CHEBI:71677
      - sbo: SBO:0000247
  - !!omap
    - id: orot_p
    - name: orotate
    - compartment: p
    - charge: -1.0
    - formula: C5H3N2O4
    - annotation: !!omap
      - biggr: orot_p:-1
      - chebi:
        - CHEBI:30839
      - sbo: SBO:0000247
  - !!omap
    - id: LalaDglu_p
    - name: L-alanyl-D-glutamate(1-)
    - compartment: p
    - charge: -1.0
    - formula: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaDglu_p:-1
      - chebi:
        - CHEBI:61395
      - sbo: SBO:0000247
  - !!omap
    - id: cdigmp_c
    - name: c-di-GMP(2-)
    - compartment: c
    - charge: -2.0
    - formula: C20H22N10O14P2
    - annotation: !!omap
      - biggr: cdigmp_c:-2
      - chebi:
        - CHEBI:58805
      - sbo: SBO:0000247
  - !!omap
    - id: uri_c
    - name: uridine
    - compartment: c
    - charge: 0.0
    - formula: C9H12N2O6
    - annotation: !!omap
      - biggr: uri_c:0
      - chebi:
        - CHEBI:16704
      - sbo: SBO:0000247
  - !!omap
    - id: dad_2_c
    - name: 2'-deoxyadenosine
    - compartment: c
    - charge: 0.0
    - formula: C10H13N5O3
    - annotation: !!omap
      - biggr: dad_2_c:0
      - chebi:
        - CHEBI:17256
      - sbo: SBO:0000247
  - !!omap
    - id: datp_c
    - name: dATP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H12N5O12P3
    - annotation: !!omap
      - biggr: datp_c:-4
      - chebi:
        - CHEBI:61404
      - sbo: SBO:0000247
  - !!omap
    - id: cholate_c
    - name: cholate
    - compartment: c
    - charge: -1.0
    - formula: C24H39O5
    - annotation: !!omap
      - biggr: cholate_c:-1
      - chebi:
        - CHEBI:29747
      - sbo: SBO:0000247
  - !!omap
    - id: 3hhcoa_c
    - name: (S)-3-hydroxyhexanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C27H42N7O18P3S
    - annotation: !!omap
      - biggr: 3hhcoa_c:-4
      - chebi:
        - CHEBI:62075
      - sbo: SBO:0000247
  - !!omap
    - id: 34dphacoa_c
    - name: 3,4-dihydroxyphenylacetyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H38N7O19P3S
    - annotation: !!omap
      - biggr: 34dphacoa_c:-4
      - chebi:
        - CHEBI:189558
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__puacgam_c
    - name: Poly-?-1,6-N-acetyl-D-glucosamine
    - compartment: c
    - charge: 1.0
    - formula: C8N1O5H14R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__puacgam_c:1
      - sbo: SBO:0000247
  - !!omap
    - id: ppi_c
    - name: diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: HO7P2
    - annotation: !!omap
      - biggr: ppi_c:-3
      - chebi:
        - CHEBI:33019
      - sbo: SBO:0000247
  - !!omap
    - id: nadp_c
    - name: NADP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C21H25N7O17P3
    - annotation: !!omap
      - biggr: nadp_c:-3
      - chebi:
        - CHEBI:58349
      - sbo: SBO:0000247
  - !!omap
    - id: s2hydog_c
    - name: (S)-2-hydroxyglutarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H6O5
    - annotation: !!omap
      - biggr: s2hydog_c:-2
      - chebi:
        - CHEBI:16782
      - sbo: SBO:0000247
  - !!omap
    - id: glyclt_p
    - name: glycolate
    - compartment: p
    - charge: -1.0
    - formula: C2H3O3
    - annotation: !!omap
      - biggr: glyclt_p:-1
      - chebi:
        - CHEBI:29805
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__metglcur_p
    - name: 1-O-methyl-Beta-D-glucuronate
    - compartment: p
    - charge: -1.0
    - formula: C7H11O7
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__metglcur_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: xtsn_p
    - name: xanthosine
    - compartment: p
    - charge: 0.0
    - formula: C10H12N4O6
    - annotation: !!omap
      - biggr: xtsn_p:0
      - chebi:
        - CHEBI:18107
      - sbo: SBO:0000247
  - !!omap
    - id: glu__L_c
    - name: L-glutamate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C5H8NO4
    - annotation: !!omap
      - biggr: glu__L_c:-1
      - chebi:
        - CHEBI:29985
      - sbo: SBO:0000247
  - !!omap
    - id: g1p_c
    - name: D-glucopyranose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: g1p_c:-2
      - chebi:
        - CHEBI:57629
      - sbo: SBO:0000247
  - !!omap
    - id: fum_c
    - name: fumarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H2O4
    - annotation: !!omap
      - biggr: fum_c:-2
      - chebi:
        - CHEBI:29806
      - sbo: SBO:0000247
  - !!omap
    - id: akg_p
    - name: 2-oxoglutarate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C5H4O5
    - annotation: !!omap
      - biggr: akg_p:-2
      - chebi:
        - CHEBI:16810
      - sbo: SBO:0000247
  - !!omap
    - id: acorn_c
    - name: N(2)-acetyl-L-ornithine
    - compartment: c
    - charge: 0.0
    - formula: C7H14N2O3
    - annotation: !!omap
      - biggr: acorn_c:0
      - chebi:
        - CHEBI:57805
        - CHEBI:16543
      - sbo: SBO:0000247
  - !!omap
    - id: frulys_c
    - name: fructosyllysine(1+)
    - compartment: c
    - charge: 1.0
    - formula: C12H25N2O7
    - annotation: !!omap
      - biggr: frulys_c:1
      - chebi:
        - CHEBI:61393
      - sbo: SBO:0000247
  - !!omap
    - id: spmd_c
    - name: spermidine(3+)
    - compartment: c
    - charge: 3.0
    - formula: C7H22N3
    - annotation: !!omap
      - biggr: spmd_c:3
      - chebi:
        - CHEBI:57834
      - sbo: SBO:0000247
  - !!omap
    - id: glusemald_c
    - name: L-glutamic 5-semialdehyde zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C5H9NO3
    - annotation: !!omap
      - biggr: glusemald_c:0
      - chebi:
        - CHEBI:58066
        - CHEBI:17232
      - sbo: SBO:0000247
  - !!omap
    - id: ile__L_c
    - name: L-isoleucine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C6H13NO2
    - annotation: !!omap
      - biggr: ile__L_c:0
      - chebi:
        - CHEBI:58045
        - CHEBI:17191
      - sbo: SBO:0000247
  - !!omap
    - id: g3pg_e
    - name: sn-glycero-3-phosphoglycerol(1-)
    - compartment: e
    - charge: -1.0
    - formula: C6H14O8P
    - annotation: !!omap
      - biggr: g3pg_e:-1
      - chebi:
        - CHEBI:84515
      - sbo: SBO:0000247
  - !!omap
    - id: 2dhp_c
    - name: 2-dehydropantoate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O4
    - annotation: !!omap
      - biggr: 2dhp_c:-1
      - chebi:
        - CHEBI:11561
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ocACP_c
    - name: Octanoyl-ACP (n-C8:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C19H35N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ocACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ttdcea_p
    - name: myristoleate
    - compartment: p
    - charge: -1.0
    - formula: C14H25O2
    - annotation: !!omap
      - biggr: ttdcea_p:-1
      - chebi:
        - CHEBI:32370
      - sbo: SBO:0000247
  - !!omap
    - id: 3dhq_c
    - name: 3-dehydroquinate
    - compartment: c
    - charge: -1.0
    - formula: C7H9O6
    - annotation: !!omap
      - biggr: 3dhq_c:-1
      - chebi:
        - CHEBI:32364
      - sbo: SBO:0000247
  - !!omap
    - id: hisp_c
    - name: L-histidinol phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H11N3O4P
    - annotation: !!omap
      - biggr: hisp_c:-1
      - chebi:
        - CHEBI:57980
      - sbo: SBO:0000247
  - !!omap
    - id: aacoa_c
    - name: acetoacetyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C25H36N7O18P3S
    - annotation: !!omap
      - biggr: aacoa_c:-4
      - chebi:
        - CHEBI:57286
      - sbo: SBO:0000247
  - !!omap
    - id: 2agpe160_c
    - name: 2-hexadecanoyl-sn-glycero-3-phosphoethanolamine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C21H44NO7P
    - annotation: !!omap
      - biggr: 2agpe160_c:0
      - chebi:
        - CHEBI:131743
        - CHEBI:132926
      - sbo: SBO:0000247
  - !!omap
    - id: so4_e
    - name: sulfate
    - compartment: e
    - charge: -2.0
    - formula: O4S
    - annotation: !!omap
      - biggr: so4_e:-2
      - chebi:
        - CHEBI:16189
      - sbo: SBO:0000247
  - !!omap
    - id: hemeO_c
    - name: ferroheme o(2-)
    - compartment: c
    - charge: -2.0
    - formula: C49H56FeN4O5
    - annotation: !!omap
      - biggr: hemeO_c:-2
      - chebi:
        - CHEBI:60530
      - sbo: SBO:0000247
  - !!omap
    - id: orn__L_e
    - name: L-ornithinium(1+)
    - compartment: e
    - charge: 1.0
    - formula: C5H13N2O2
    - annotation: !!omap
      - biggr: orn__L_e:1
      - chebi:
        - CHEBI:46911
      - sbo: SBO:0000247
  - !!omap
    - id: kdo2lipid4_p
    - name: (KDO)2-lipid IVA(6-)
    - compartment: p
    - charge: -6.0
    - formula: C84H148N2O37P2
    - annotation: !!omap
      - biggr: kdo2lipid4_p:-6
      - chebi:
        - CHEBI:60365
      - sbo: SBO:0000247
  - !!omap
    - id: 4abut_e
    - name: gamma-aminobutyric acid
    - compartment: e
    - charge: 0.0
    - formula: C4H9NO2
    - annotation: !!omap
      - biggr: 4abut_e:0
      - chebi:
        - CHEBI:59888
        - CHEBI:16865
      - sbo: SBO:0000247
  - !!omap
    - id: athtp_c
    - name: adenosine thiamine triphosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C22H28N9O13P3S
    - annotation: !!omap
      - biggr: athtp_c:-2
      - chebi:
        - CHEBI:71393
      - sbo: SBO:0000247
  - !!omap
    - id: galt1p_c
    - name: galactitol 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H13O9P
    - annotation: !!omap
      - biggr: galt1p_c:-2
      - chebi:
        - CHEBI:60083
      - sbo: SBO:0000247
  - !!omap
    - id: glu__L_e
    - name: L-glutamate(1-)
    - compartment: e
    - charge: -1.0
    - formula: C5H8NO4
    - annotation: !!omap
      - biggr: glu__L_e:-1
      - chebi:
        - CHEBI:29985
      - sbo: SBO:0000247
  - !!omap
    - id: prpnte_c
    - name: propionate
    - compartment: c
    - charge: -1.0
    - formula: C3H5O2
    - annotation: !!omap
      - biggr: prpnte_c:-1
      - chebi:
        - CHEBI:17272
      - sbo: SBO:0000247
  - !!omap
    - id: 3ohodcoa_c
    - name: 3-oxooctadecanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C39H64N7O18P3S
    - annotation: !!omap
      - biggr: 3ohodcoa_c:-4
      - chebi:
        - CHEBI:71407
      - sbo: SBO:0000247
  - !!omap
    - id: 2oph_c
    - name: 2-octaprenylphenol
    - compartment: c
    - charge: 0.0
    - formula: C46H70O
    - annotation: !!omap
      - biggr: 2oph_c:0
      - chebi:
        - CHEBI:40407
      - sbo: SBO:0000247
  - !!omap
    - id: taur_c
    - name: taurine
    - compartment: c
    - charge: 0.0
    - formula: C2H7NO3S
    - annotation: !!omap
      - biggr: taur_c:0
      - chebi:
        - CHEBI:507393
        - CHEBI:15891
      - sbo: SBO:0000247
  - !!omap
    - id: ckdo_c
    - name: CMP-3-deoxy-beta-D-manno-octulosonate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C17H24N3O15P
    - annotation: !!omap
      - biggr: ckdo_c:-2
      - chebi:
        - CHEBI:85987
      - sbo: SBO:0000247
  - !!omap
    - id: uamag_c
    - name: UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C28H39N5O23P2
    - annotation: !!omap
      - biggr: uamag_c:-4
      - chebi:
        - CHEBI:83900
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__23dhbzs3_c
    - name: 2-3-dihydroxybenzoylserine trimer
    - compartment: c
    - charge: -1.0
    - formula: C30H28N3O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__23dhbzs3_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: glcr_c
    - name: D-glucarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H8O8
    - annotation: !!omap
      - biggr: glcr_c:-2
      - chebi:
        - CHEBI:30612
      - sbo: SBO:0000247
  - !!omap
    - id: dhpt_c
    - name: 7,8-dihydropteroate
    - compartment: c
    - charge: -1.0
    - formula: C14H13N6O3
    - annotation: !!omap
      - biggr: dhpt_c:-1
      - chebi:
        - CHEBI:17839
      - sbo: SBO:0000247
  - !!omap
    - id: sqg_c
    - name: 3-(alpha-D-6-sulfoquinovosyl)-sn-glycerol(1-)
    - compartment: c
    - charge: -1.0
    - formula: C9H17O10S
    - annotation: !!omap
      - biggr: sqg_c:-1
      - chebi:
        - CHEBI:190012
      - sbo: SBO:0000247
  - !!omap
    - id: gmhep7p_c
    - name: D-glycero-D-manno-heptose 7-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H13O10P
    - annotation: !!omap
      - biggr: gmhep7p_c:-2
      - chebi:
        - CHEBI:59955
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fad_p
    - name: Flavin adenine dinucleotide oxidized
    - compartment: p
    - charge: -2.0
    - formula: C27H31N9O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fad_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: manglyc_e
    - name: 2-(alpha-D-mannosyl)-D-glycerate
    - compartment: e
    - charge: -1.0
    - formula: C9H15O9
    - annotation: !!omap
      - biggr: manglyc_e:-1
      - chebi:
        - CHEBI:57541
      - sbo: SBO:0000247
  - !!omap
    - id: ascb__L_p
    - name: L-ascorbic acid
    - compartment: p
    - charge: 0.0
    - formula: C6H8O6
    - annotation: !!omap
      - biggr: ascb__L_p:0
      - chebi:
        - CHEBI:29073
      - sbo: SBO:0000247
  - !!omap
    - id: od2coa_c
    - name: trans-2-octadecenoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C39H64N7O17P3S
    - annotation: !!omap
      - biggr: od2coa_c:-4
      - chebi:
        - CHEBI:71412
      - sbo: SBO:0000247
  - !!omap
    - id: idon__L_p
    - name: L-idonate
    - compartment: p
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: idon__L_p:-1
      - chebi:
        - CHEBI:17796
      - sbo: SBO:0000247
  - !!omap
    - id: urea_p
    - name: carbamimidic acid
    - compartment: p
    - charge: 0.0
    - formula: CH4N2O
    - annotation: !!omap
      - biggr: urea_p:0
      - chebi:
        - CHEBI:16199
        - CHEBI:48376
      - sbo: SBO:0000247
  - !!omap
    - id: rhmn_c
    - name: L-rhamnonate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O6
    - annotation: !!omap
      - biggr: rhmn_c:-1
      - chebi:
        - CHEBI:58118
      - sbo: SBO:0000247
  - !!omap
    - id: cbp_c
    - name: carbamoyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: CH2NO5P
    - annotation: !!omap
      - biggr: cbp_c:-2
      - chebi:
        - CHEBI:58228
      - sbo: SBO:0000247
  - !!omap
    - id: agm_p
    - name: agmatinium(2+)
    - compartment: p
    - charge: 2.0
    - formula: C5H16N4
    - annotation: !!omap
      - biggr: agm_p:2
      - chebi:
        - CHEBI:58145
      - sbo: SBO:0000247
  - !!omap
    - id: 3mob_c
    - name: 3-methyl-2-oxobutanoate
    - compartment: c
    - charge: -1.0
    - formula: C5H7O3
    - annotation: !!omap
      - biggr: 3mob_c:-1
      - chebi:
        - CHEBI:11851
      - sbo: SBO:0000247
  - !!omap
    - id: suchms_c
    - name: O-succinyl-L-homoserinate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C8H12NO6
    - annotation: !!omap
      - biggr: suchms_c:-1
      - chebi:
        - CHEBI:57661
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__gicolipa_c
    - name: Glucosyl-inner core oligosaccharide lipid A
    - compartment: c
    - charge: -11.0
    - formula: C151H261N2O79P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__gicolipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__halipa_e
    - name: Hepta-acylated KDO(2)-lipid (A)
    - compartment: e
    - charge: -6.0
    - formula: C126H226N2O40P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__halipa_e:-6
      - sbo: SBO:0000247
  - !!omap
    - id: chol_p
    - name: choline
    - compartment: p
    - charge: 1.0
    - formula: C5H14NO
    - annotation: !!omap
      - biggr: chol_p:1
      - chebi:
        - CHEBI:15354
      - sbo: SBO:0000247
  - !!omap
    - id: butso3_c
    - name: butane-1-sulfonate
    - compartment: c
    - charge: -1.0
    - formula: C4H9O3S
    - annotation: !!omap
      - biggr: butso3_c:-1
      - chebi:
        - CHEBI:61911
      - sbo: SBO:0000247
  - !!omap
    - id: dcyt_c
    - name: 2'-deoxycytidine
    - compartment: c
    - charge: 0.0
    - formula: C9H13N3O4
    - annotation: !!omap
      - biggr: dcyt_c:0
      - chebi:
        - CHEBI:15698
      - sbo: SBO:0000247
  - !!omap
    - id: 3hpppn_p
    - name: 3-(3-hydroxyphenyl)propanoate
    - compartment: p
    - charge: -1.0
    - formula: C9H9O3
    - annotation: !!omap
      - biggr: 3hpppn_p:-1
      - chebi:
        - CHEBI:57277
      - sbo: SBO:0000247
  - !!omap
    - id: dc2coa_c
    - name: trans-dec-2-enoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C31H48N7O17P3S
    - annotation: !!omap
      - biggr: dc2coa_c:-4
      - chebi:
        - CHEBI:61406
      - sbo: SBO:0000247
  - !!omap
    - id: lipoate_p
    - name: (R)-lipoic acid
    - compartment: p
    - charge: 0.0
    - formula: C8H14O2S2
    - annotation: !!omap
      - biggr: lipoate_p:0
      - chebi:
        - CHEBI:30314
      - sbo: SBO:0000247
  - !!omap
    - id: minohp_p
    - name: myo-inositol hexakisphosphate(12-)
    - compartment: p
    - charge: -12.0
    - formula: C6H6O24P6
    - annotation: !!omap
      - biggr: minohp_p:-12
      - chebi:
        - CHEBI:58130
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg120_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0)
    - compartment: p
    - charge: -1.0
    - formula: C18H36O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg120_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dcmp_p
    - name: 2'-deoxycytosine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H12N3O7P
    - annotation: !!omap
      - biggr: dcmp_p:-2
      - chebi:
        - CHEBI:57566
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg180_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0)
    - compartment: p
    - charge: -1.0
    - formula: C24H48O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg180_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: acglc__D_c
    - name: 6-O-acetyl-beta-D-glucose
    - compartment: c
    - charge: 0.0
    - formula: C8H14O7
    - annotation: !!omap
      - biggr: acglc__D_c:0
      - chebi:
        - CHEBI:62111
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__eca3und_p
    - name: (enterobacterial common antigen)x3 undecaprenyl-diphosphate
    - compartment: p
    - charge: -5.0
    - formula: C127H198N9O52P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__eca3und_p:-5
      - sbo: SBO:0000247
  - !!omap
    - id: r5p_p
    - name: D-ribofuranose 5-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: r5p_p:-2
      - chebi:
        - CHEBI:78346
      - sbo: SBO:0000247
  - !!omap
    - id: 1agpe120_p
    - name: PE(12:0/0:0)
    - compartment: p
    - charge: 0.0
    - formula: C17H36NO7P
    - annotation: !!omap
      - biggr: 1agpe120_p:0
      - chebi:
        - CHEBI:168574
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ragund_c
    - name: Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate
    - compartment: c
    - charge: -2.0
    - formula: C69H113N1O16P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ragund_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: oxa_c
    - name: oxalate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C2O4
    - annotation: !!omap
      - biggr: oxa_c:-2
      - chebi:
        - CHEBI:30623
      - sbo: SBO:0000247
  - !!omap
    - id: r5p_e
    - name: D-ribofuranose 5-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: r5p_e:-2
      - chebi:
        - CHEBI:78346
      - sbo: SBO:0000247
  - !!omap
    - id: no_p
    - name: nitric oxide
    - compartment: p
    - charge: 0.0
    - formula: NO
    - annotation: !!omap
      - biggr: no_p:0
      - chebi:
        - CHEBI:16480
      - sbo: SBO:0000247
  - !!omap
    - id: acser_e
    - name: O-acetyl-L-serine
    - compartment: e
    - charge: 0.0
    - formula: C5H9NO4
    - annotation: !!omap
      - biggr: acser_e:0
      - chebi:
        - CHEBI:58340
        - CHEBI:17981
      - sbo: SBO:0000247
  - !!omap
    - id: dxylnt_e
    - name: D-xylonate
    - compartment: e
    - charge: -1.0
    - formula: C5H9O6
    - annotation: !!omap
      - biggr: dxylnt_e:-1
      - chebi:
        - CHEBI:17746
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein4p4p_p
    - name: Two linked disacharide tetrapeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C74H114N14O40
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein4p4p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: nalme_c
    - name: N(alpha)-acetyl-L-lysine methyl ester(1+)
    - compartment: c
    - charge: 1.0
    - formula: C9H19N2O3
    - annotation: !!omap
      - biggr: nalme_c:1
      - chebi:
        - CHEBI:64854
      - sbo: SBO:0000247
  - !!omap
    - id: mn2_p
    - name: manganese(2+)
    - compartment: p
    - charge: 2.0
    - formula: Mn
    - annotation: !!omap
      - biggr: mn2_p:2
      - chebi:
        - CHEBI:29035
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tpalm2eACP_c
    - name: Trans-Hexadec-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C27H49N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tpalm2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hpalmACP_c
    - name: R-3-hydroxypalmitoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C27H51N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hpalmACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr140_c
    - name: 1,2 ditetradecanoylglycerol
    - compartment: c
    - charge: 0.0
    - formula: C31H60O5
    - annotation: !!omap
      - biggr: 12dgr140_c:0
      - chebi:
        - CHEBI:83320
      - sbo: SBO:0000247
  - !!omap
    - id: udpg_c
    - name: UDP-alpha-D-glucose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpg_c:-2
      - chebi:
        - CHEBI:58885
      - sbo: SBO:0000247
  - !!omap
    - id: gln__L_c
    - name: L-glutamine
    - compartment: c
    - charge: 0.0
    - formula: C5H10N2O3
    - annotation: !!omap
      - biggr: gln__L_c:0
      - chebi:
        - CHEBI:58359
        - CHEBI:18050
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp160_c
    - name: Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)
    - compartment: c
    - charge: -3.0
    - formula: C38H73O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp160_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: 3c3hmp_c
    - name: (2S)-2-isopropylmalate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H10O5
    - annotation: !!omap
      - biggr: 3c3hmp_c:-2
      - chebi:
        - CHEBI:1178
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg161_c
    - name: Acyl phosphatidylglycerol (n-C16:1)
    - compartment: c
    - charge: -1.0
    - formula: C54H98O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg161_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pe160_c
    - name: 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C37H74NO8P
    - annotation: !!omap
      - biggr: pe160_c:0
      - chebi:
        - CHEBI:73005
        - CHEBI:73127
      - sbo: SBO:0000247
  - !!omap
    - id: tartr__D_e
    - name: D-tartrate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H4O6
    - annotation: !!omap
      - biggr: tartr__D_e:-2
      - chebi:
        - CHEBI:30927
      - sbo: SBO:0000247
  - !!omap
    - id: anth_c
    - name: anthranilate
    - compartment: c
    - charge: -1.0
    - formula: C7H6NO2
    - annotation: !!omap
      - biggr: anth_c:-1
      - chebi:
        - CHEBI:16567
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__enlipa_p
    - name: Phosphoethanolamine KDO(2)-lipid (A)
    - compartment: p
    - charge: -6.0
    - formula: C112H202N3O42P3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__enlipa_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: pap_c
    - name: adenosine 3',5'-bismonophosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H11N5O10P2
    - annotation: !!omap
      - biggr: pap_c:-4
      - chebi:
        - CHEBI:58343
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg181_p
    - name: Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)
    - compartment: p
    - charge: -1.0
    - formula: C42H78O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg181_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: xmp_c
    - name: 5'-xanthylate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H11N4O9P
    - annotation: !!omap
      - biggr: xmp_c:-2
      - chebi:
        - CHEBI:57464
      - sbo: SBO:0000247
  - !!omap
    - id: r2hydog_c
    - name: (R)-2-hydroxyglutarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H6O5
    - annotation: !!omap
      - biggr: r2hydog_c:-2
      - chebi:
        - CHEBI:15801
      - sbo: SBO:0000247
  - !!omap
    - id: thcur_c
    - name: tetrahydrocurcumin
    - compartment: c
    - charge: 0.0
    - formula: C21H24O6
    - annotation: !!omap
      - biggr: thcur_c:0
      - chebi:
        - CHEBI:67263
      - sbo: SBO:0000247
  - !!omap
    - id: 5phua_c
    - name: N-carbamoyl-D-phenylglycine
    - compartment: c
    - charge: 0.0
    - formula: C9H10N2O3
    - annotation: !!omap
      - biggr: 5phua_c:0
      - chebi:
        - CHEBI:141249
      - sbo: SBO:0000247
  - !!omap
    - id: ile__L_e
    - name: L-isoleucine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C6H13NO2
    - annotation: !!omap
      - biggr: ile__L_e:0
      - chebi:
        - CHEBI:58045
        - CHEBI:17191
      - sbo: SBO:0000247
  - !!omap
    - id: nadhx__R_c
    - name: (R)-NADHX(2-)
    - compartment: c
    - charge: -2.0
    - formula: C21H29N7O15P2
    - annotation: !!omap
      - biggr: nadhx__R_c:-2
      - chebi:
        - CHEBI:64075
      - sbo: SBO:0000247
  - !!omap
    - id: 2omhmbl_c
    - name: 3-demethylubiquinol-8
    - compartment: c
    - charge: 0.0
    - formula: C48H74O4
    - annotation: !!omap
      - biggr: 2omhmbl_c:0
      - chebi:
        - CHEBI:61705
      - sbo: SBO:0000247
  - !!omap
    - id: uppg3_c
    - name: uroporphyrinogen III(8-)
    - compartment: c
    - charge: -8.0
    - formula: C40H36N4O16
    - annotation: !!omap
      - biggr: uppg3_c:-8
      - chebi:
        - CHEBI:57308
      - sbo: SBO:0000247
  - !!omap
    - id: 3hocoa_c
    - name: (S)-3-hydroxyoctanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H46N7O18P3S
    - annotation: !!omap
      - biggr: 3hocoa_c:-4
      - chebi:
        - CHEBI:62617
      - sbo: SBO:0000247
  - !!omap
    - id: 2cpr5p_c
    - name: 1-(2-carboxylatophenylamino)-1-deoxy-D-ribulose 5-phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C12H13NO9P
    - annotation: !!omap
      - biggr: 2cpr5p_c:-3
      - chebi:
        - CHEBI:58613
      - sbo: SBO:0000247
  - !!omap
    - id: uagmda_c
    - name: 
        undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine(4-)
    - compartment: c
    - charge: -4.0
    - formula: C87H139N7O23P2
    - annotation: !!omap
      - biggr: uagmda_c:-4
      - chebi:
        - CHEBI:61387
      - sbo: SBO:0000247
  - !!omap
    - id: 5dh4dglc_c
    - name: 5-dehydro-4-deoxy-D-glucarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H6O7
    - annotation: !!omap
      - biggr: 5dh4dglc_c:-2
      - chebi:
        - CHEBI:42819
      - sbo: SBO:0000247
  - !!omap
    - id: dcmp_c
    - name: 2'-deoxycytosine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H12N3O7P
    - annotation: !!omap
      - biggr: dcmp_c:-2
      - chebi:
        - CHEBI:57566
      - sbo: SBO:0000247
  - !!omap
    - id: cechddd_c
    - name: 3-(cis-5,6-dihydroxycyclohexa-1,3-dienyl)propanoate
    - compartment: c
    - charge: -1.0
    - formula: C9H11O4
    - annotation: !!omap
      - biggr: cechddd_c:-1
      - chebi:
        - CHEBI:60087
      - sbo: SBO:0000247
  - !!omap
    - id: 25dkglcn_c
    - name: 2,5-didehydro-D-gluconate
    - compartment: c
    - charge: -1.0
    - formula: C6H7O7
    - annotation: !!omap
      - biggr: 25dkglcn_c:-1
      - chebi:
        - CHEBI:11449
      - sbo: SBO:0000247
  - !!omap
    - id: his__L_e
    - name: L-histidine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C6H9N3O2
    - annotation: !!omap
      - biggr: his__L_e:0
      - chebi:
        - CHEBI:57595
        - CHEBI:15971
      - sbo: SBO:0000247
  - !!omap
    - id: dgmp_c
    - name: 2'-deoxyguanosine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: dgmp_c:-2
      - chebi:
        - CHEBI:57673
      - sbo: SBO:0000247
  - !!omap
    - id: hxan_e
    - name: hypoxanthine
    - compartment: e
    - charge: 0.0
    - formula: C5H4N4O
    - annotation: !!omap
      - biggr: hxan_e:0
      - chebi:
        - CHEBI:17368
      - sbo: SBO:0000247
  - !!omap
    - id: adphep_DD_c
    - name: ADP-D-glycero-beta-D-manno-heptose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C17H25N5O16P2
    - annotation: !!omap
      - biggr: adphep_DD_c:-2
      - chebi:
        - CHEBI:59967
      - sbo: SBO:0000247
  - !!omap
    - id: 4mhetz_c
    - name: 5-(2-hydroxyethyl)-4-methylthiazole
    - compartment: c
    - charge: 0.0
    - formula: C6H9NOS
    - annotation: !!omap
      - biggr: 4mhetz_c:0
      - chebi:
        - CHEBI:17957
      - sbo: SBO:0000247
  - !!omap
    - id: h2s_e
    - name: hydrogen sulfide
    - compartment: e
    - charge: 0.0
    - formula: H2S
    - annotation: !!omap
      - biggr: h2s_e:0
      - chebi:
        - CHEBI:16136
      - sbo: SBO:0000247
  - !!omap
    - id: na1_e
    - name: sodium(1+)
    - compartment: e
    - charge: 1.0
    - formula: Na
    - annotation: !!omap
      - biggr: na1_e:1
      - chebi:
        - CHEBI:29101
      - sbo: SBO:0000247
  - !!omap
    - id: tyr__L_e
    - name: L-tyrosine
    - compartment: e
    - charge: 0.0
    - formula: C9H11NO3
    - annotation: !!omap
      - biggr: tyr__L_e:0
      - chebi:
        - CHEBI:58315
        - CHEBI:17895
      - sbo: SBO:0000247
  - !!omap
    - id: acac_e
    - name: acetoacetate
    - compartment: e
    - charge: -1.0
    - formula: C4H5O3
    - annotation: !!omap
      - biggr: acac_e:-1
      - chebi:
        - CHEBI:13705
      - sbo: SBO:0000247
  - !!omap
    - id: 2dmmq8_c
    - name: 2-demethylmenaquinone-8
    - compartment: c
    - charge: 0.0
    - formula: C50H70O2
    - annotation: !!omap
      - biggr: 2dmmq8_c:0
      - chebi:
        - CHEBI:48455
      - sbo: SBO:0000247
  - !!omap
    - id: 4adcho_c
    - name: 4-amino-4-deoxychorismate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H10NO5
    - annotation: !!omap
      - biggr: 4adcho_c:-1
      - chebi:
        - CHEBI:58406
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fmn_e
    - name: FMN C17H19N4O9P
    - compartment: e
    - charge: -2.0
    - formula: C17H19N4O9P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fmn_e:-2
      - sbo: SBO:0000247
  - !!omap
    - id: cys__L_e
    - name: L-cysteine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__L_e:0
      - chebi:
        - CHEBI:35235
        - CHEBI:17561
      - sbo: SBO:0000247
  - !!omap
    - id: glyc3p_e
    - name: sn-glycerol 3-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C3H7O6P
    - annotation: !!omap
      - biggr: glyc3p_e:-2
      - chebi:
        - CHEBI:57597
      - sbo: SBO:0000247
  - !!omap
    - id: rib__D_p
    - name: D-ribofuranose
    - compartment: p
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: rib__D_p:0
      - chebi:
        - CHEBI:47013
      - sbo: SBO:0000247
  - !!omap
    - id: 26dap__M_e
    - name: meso-2,6-diaminopimelic acid dizwitterion
    - compartment: e
    - charge: 0.0
    - formula: C7H14N2O4
    - annotation: !!omap
      - biggr: 26dap__M_e:0
      - chebi:
        - CHEBI:57791
        - CHEBI:16488
      - sbo: SBO:0000247
  - !!omap
    - id: xyl__D_p
    - name: D-xylopyranose
    - compartment: p
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xyl__D_p:0
      - chebi:
        - CHEBI:53455
      - sbo: SBO:0000247
  - !!omap
    - id: 3hcinnm_c
    - name: trans-3-coumarate
    - compartment: c
    - charge: -1.0
    - formula: C9H7O3
    - annotation: !!omap
      - biggr: 3hcinnm_c:-1
      - chebi:
        - CHEBI:47928
      - sbo: SBO:0000247
  - !!omap
    - id: inost_p
    - name: myo-inositol
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: inost_p:0
      - chebi:
        - CHEBI:17268
      - sbo: SBO:0000247
  - !!omap
    - id: pppn_c
    - name: 3-phenylpropionate
    - compartment: c
    - charge: -1.0
    - formula: C9H9O2
    - annotation: !!omap
      - biggr: pppn_c:-1
      - chebi:
        - CHEBI:51057
      - sbo: SBO:0000247
  - !!omap
    - id: ocdca_p
    - name: octadecanoate
    - compartment: p
    - charge: -1.0
    - formula: C18H35O2
    - annotation: !!omap
      - biggr: ocdca_p:-1
      - chebi:
        - CHEBI:25629
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dtdp4aaddg_c
    - name: DTDP-4-acetamido-4,6-dideoxy-D-galactose
    - compartment: c
    - charge: -2.0
    - formula: C18H27N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dtdp4aaddg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malthx_c
    - name: Maltohexaose
    - compartment: c
    - charge: 0.0
    - formula: C36H62O31
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malthx_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__maltpt_c
    - name: Maltopentaose
    - compartment: c
    - charge: 0.0
    - formula: C30H52O26
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__maltpt_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: g3ps_e
    - name: sn-glycero-3-phosphoserine(1-)
    - compartment: e
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: g3ps_e:-1
      - chebi:
        - CHEBI:64765
      - sbo: SBO:0000247
  - !!omap
    - id: acon_T_c
    - name: trans-aconitate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H3O6
    - annotation: !!omap
      - biggr: acon_T_c:-3
      - chebi:
        - CHEBI:15708
      - sbo: SBO:0000247
  - !!omap
    - id: 3gmp_p
    - name: guanosine 3'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H12N5O8P
    - annotation: !!omap
      - biggr: 3gmp_p:-2
      - chebi:
        - CHEBI:60732
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__maltttr_c
    - name: Maltotetraose
    - compartment: c
    - charge: 0.0
    - formula: C24H42O21
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__maltttr_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: bbtcoa_c
    - name: gamma-butyrobetainyl-CoA(3-)
    - compartment: c
    - charge: -3.0
    - formula: C28H46N8O17P3S
    - annotation: !!omap
      - biggr: bbtcoa_c:-3
      - chebi:
        - CHEBI:61513
      - sbo: SBO:0000247
  - !!omap
    - id: duri_p
    - name: 2'-deoxyuridine
    - compartment: p
    - charge: 0.0
    - formula: C9H12N2O5
    - annotation: !!omap
      - biggr: duri_p:0
      - chebi:
        - CHEBI:16450
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm4p_p
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide
    - compartment: p
    - charge: -2.0
    - formula: C37H57N7O20
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm4p_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: ddca_e
    - name: dodecanoate
    - compartment: e
    - charge: -1.0
    - formula: C12H23O2
    - annotation: !!omap
      - biggr: ddca_e:-1
      - chebi:
        - CHEBI:18262
      - sbo: SBO:0000247
  - !!omap
    - id: udpLa4n_c
    - name: UDP-4-amino-4-deoxy-beta-L-arabinopyranose(1-)
    - compartment: c
    - charge: -1.0
    - formula: C14H22N3O15P2
    - annotation: !!omap
      - biggr: udpLa4n_c:-1
      - chebi:
        - CHEBI:58708
      - sbo: SBO:0000247
  - !!omap
    - id: tartr__L_p
    - name: L-tartrate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H4O6
    - annotation: !!omap
      - biggr: tartr__L_p:-2
      - chebi:
        - CHEBI:30924
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__octeACP_c
    - name: Cis-octadec-11-enoyl-[acyl-carrier protein] (n-C18:1)
    - compartment: c
    - charge: -1.0
    - formula: C29H53N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__octeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 26dap__M_p
    - name: meso-2,6-diaminopimelic acid dizwitterion
    - compartment: p
    - charge: 0.0
    - formula: C7H14N2O4
    - annotation: !!omap
      - biggr: 26dap__M_p:0
      - chebi:
        - CHEBI:57791
        - CHEBI:16488
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__hacolipa_e
    - name: Hepta-acylated core oligosaccharide lipid A (E. coli)
    - compartment: e
    - charge: -11.0
    - formula: C192H333N2O101P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__hacolipa_e:-11
      - sbo: SBO:0000247
  - !!omap
    - id: gtspmd_c
    - name: glutathionylspermidinium(2+)
    - compartment: c
    - charge: 2.0
    - formula: C17H36N6O5S
    - annotation: !!omap
      - biggr: gtspmd_c:2
      - chebi:
        - CHEBI:57835
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16aund_c
    - name: O16 antigen undecaprenyl diphosphate
    - compartment: c
    - charge: -2.0
    - formula: C89H145N1O32P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16aund_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16aund_p
    - name: O16 antigen undecaprenyl diphosphate
    - compartment: p
    - charge: -2.0
    - formula: C89H145N1O32P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16aund_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hhexACP_c
    - name: (R)-3-Hydroxyhexanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C17H31N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hhexACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: adocbl_p
    - name: cobamamide
    - compartment: p
    - charge: 0.0
    - formula: C72H100CoN18O17P
    - annotation: !!omap
      - biggr: adocbl_p:0
      - chebi:
        - CHEBI:18408
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__acolipa_p
    - name: 4-Amino-4-deoxy-L-arabinose modified core oligosaccharide lipid A
    - compartment: p
    - charge: -9.0
    - formula: C181H314N3O103P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__acolipa_p:-9
      - sbo: SBO:0000247
  - !!omap
    - id: butso3_p
    - name: butane-1-sulfonate
    - compartment: p
    - charge: -1.0
    - formula: C4H9O3S
    - annotation: !!omap
      - biggr: butso3_p:-1
      - chebi:
        - CHEBI:61911
      - sbo: SBO:0000247
  - !!omap
    - id: cys__L_p
    - name: L-cysteine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__L_p:0
      - chebi:
        - CHEBI:35235
        - CHEBI:17561
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpgn_un_c
    - name: Coprogen unloaded (no Fe(III))
    - compartment: c
    - charge: -4.0
    - formula: C35H52N6O13
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpgn_un_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps161_c
    - name: Phosphatidylserine (dihexadec-9-enoyl, n-C16:1)
    - compartment: c
    - charge: -1.0
    - formula: C38H69N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps161_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__t3c5ddeceACP_c
    - name: Trans-3-cis-5-dodecenoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C23H39N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__t3c5ddeceACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps120_c
    - name: Phosphatidylserine (didodecanoyl, n-C12:0)
    - compartment: c
    - charge: -1.0
    - formula: C30H57N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps120_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__arbtn_fe3_p
    - name: Aerobactin
    - compartment: p
    - charge: 0.0
    - formula: C22H33FeN4O13
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__arbtn_fe3_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr161_p
    - name: 1,2-di-palmitoleoyl-2-sn-glycerol
    - compartment: p
    - charge: 0.0
    - formula: C35H64O5
    - annotation: !!omap
      - biggr: 12dgr161_p:0
      - chebi:
        - CHEBI:84417
      - sbo: SBO:0000247
  - !!omap
    - id: progly_p
    - name: L-prolinylglycine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C7H12N2O3
    - annotation: !!omap
      - biggr: progly_p:0
      - chebi:
        - CHEBI:61696
        - CHEBI:61695
      - sbo: SBO:0000247
  - !!omap
    - id: orn__L_p
    - name: L-ornithinium(1+)
    - compartment: p
    - charge: 1.0
    - formula: C5H13N2O2
    - annotation: !!omap
      - biggr: orn__L_p:1
      - chebi:
        - CHEBI:46911
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa181_p
    - name: 1,2-dioctadec-11-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C39H71O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa181_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr120_p
    - name: 1,2-dilauroyl-sn-glycerol
    - compartment: p
    - charge: 0.0
    - formula: C27H52O5
    - annotation: !!omap
      - biggr: 12dgr120_p:0
      - chebi:
        - CHEBI:183968
      - sbo: SBO:0000247
  - !!omap
    - id: asp__L_p
    - name: L-aspartate(1-)
    - compartment: p
    - charge: -1.0
    - formula: C4H6NO4
    - annotation: !!omap
      - biggr: asp__L_p:-1
      - chebi:
        - CHEBI:29991
      - sbo: SBO:0000247
  - !!omap
    - id: pydam_p
    - name: pyridoxaminium(1+)
    - compartment: p
    - charge: 1.0
    - formula: C8H13N2O2
    - annotation: !!omap
      - biggr: pydam_p:1
      - chebi:
        - CHEBI:57761
      - sbo: SBO:0000247
  - !!omap
    - id: 2agpe160_p
    - name: 2-hexadecanoyl-sn-glycero-3-phosphoethanolamine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C21H44NO7P
    - annotation: !!omap
      - biggr: 2agpe160_p:0
      - chebi:
        - CHEBI:131743
        - CHEBI:132926
      - sbo: SBO:0000247
  - !!omap
    - id: crn_p
    - name: (R)-carnitine
    - compartment: p
    - charge: 0.0
    - formula: C7H15NO3
    - annotation: !!omap
      - biggr: crn_p:0
      - chebi:
        - CHEBI:16347
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg140_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0)
    - compartment: c
    - charge: -1.0
    - formula: C20H40O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg140_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 1hdecg3p_p
    - name: 1-palmitoyl-sn-glycerol 3-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C19H37O7P
    - annotation: !!omap
      - biggr: 1hdecg3p_p:-2
      - chebi:
        - CHEBI:57518
      - sbo: SBO:0000247
  - !!omap
    - id: btn_p
    - name: biotinate
    - compartment: p
    - charge: -1.0
    - formula: C10H15N2O3S
    - annotation: !!omap
      - biggr: btn_p:-1
      - chebi:
        - CHEBI:57586
      - sbo: SBO:0000247
  - !!omap
    - id: pro__L_p
    - name: L-proline
    - compartment: p
    - charge: 0.0
    - formula: C5H9NO2
    - annotation: !!omap
      - biggr: pro__L_p:0
      - chebi:
        - CHEBI:60039
        - CHEBI:17203
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ttdcap_c
    - name: Tetradecanoyl-phosphate (n-C14:0)
    - compartment: c
    - charge: -1.0
    - formula: C14H28O5P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ttdcap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: mal__D_p
    - name: (R)-malate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H4O5
    - annotation: !!omap
      - biggr: mal__D_p:-2
      - chebi:
        - CHEBI:15588
      - sbo: SBO:0000247
  - !!omap
    - id: co2_p
    - name: carbon dioxide
    - compartment: p
    - charge: 0.0
    - formula: CO2
    - annotation: !!omap
      - biggr: co2_p:0
      - chebi:
        - CHEBI:16526
      - sbo: SBO:0000247
  - !!omap
    - id: 5dglcn_p
    - name: 5-dehydro-D-gluconate
    - compartment: p
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: 5dglcn_p:-1
      - chebi:
        - CHEBI:58143
      - sbo: SBO:0000247
  - !!omap
    - id: fe3_c
    - name: iron(3+)
    - compartment: c
    - charge: 3.0
    - formula: Fe
    - annotation: !!omap
      - biggr: fe3_c:3
      - chebi:
        - CHEBI:29034
      - sbo: SBO:0000247
  - !!omap
    - id: arbt_e
    - name: hydroquinone O-beta-D-glucopyranoside
    - compartment: e
    - charge: 0.0
    - formula: C12H16O7
    - annotation: !!omap
      - biggr: arbt_e:0
      - chebi:
        - CHEBI:18305
      - sbo: SBO:0000247
  - !!omap
    - id: ch4_p
    - name: methane
    - compartment: p
    - charge: 0.0
    - formula: CH4
    - annotation: !!omap
      - biggr: ch4_p:0
      - chebi:
        - CHEBI:16183
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fad_e
    - name: Flavin adenine dinucleotide oxidized
    - compartment: e
    - charge: -2.0
    - formula: C27H31N9O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fad_e:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fmn_p
    - name: FMN C17H19N4O9P
    - compartment: p
    - charge: -2.0
    - formula: C17H19N4O9P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fmn_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dhptdd_c
    - name: 3-hydroxy-5-phosphonooxypentane-2,4-dione
    - compartment: c
    - charge: -2.0
    - formula: C5H7O7P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dhptdd_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: quin_c
    - name: (-)-quinic acid
    - compartment: c
    - charge: 0.0
    - formula: C7H12O6
    - annotation: !!omap
      - biggr: quin_c:0
      - chebi:
        - CHEBI:17521
      - sbo: SBO:0000247
  - !!omap
    - id: sel_p
    - name: selenate
    - compartment: p
    - charge: -2.0
    - formula: O4Se
    - annotation: !!omap
      - biggr: sel_p:-2
      - chebi:
        - CHEBI:15075
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__epmeACP_c
    - name: Enoylpimeloyl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C19H31N2O10PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__epmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dtgcl_c
    - name: 2,2'-dithiodiethanol
    - compartment: c
    - charge: 0.0
    - formula: C4H10O2S2
    - annotation: !!omap
      - biggr: dtgcl_c:0
      - chebi:
        - CHEBI:43136
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__23dappa_c
    - name: 2,3-diaminopropionate
    - compartment: c
    - charge: 1.0
    - formula: C3H9N2O2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__23dappa_c:1
      - sbo: SBO:0000247
  - !!omap
    - id: cholate_p
    - name: cholate
    - compartment: p
    - charge: -1.0
    - formula: C24H39O5
    - annotation: !!omap
      - biggr: cholate_p:-1
      - chebi:
        - CHEBI:29747
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__mococdp_c
    - name: Molybdopterin cytosine dinucleotide
    - compartment: c
    - charge: -2.0
    - formula: C19H22N8O15P2S2Mo
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__mococdp_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: doxrbcn_p
    - name: doxorubicin
    - compartment: p
    - charge: 0.0
    - formula: C27H29NO11
    - annotation: !!omap
      - biggr: doxrbcn_p:0
      - chebi:
        - CHEBI:28748
      - sbo: SBO:0000247
  - !!omap
    - id: dopa_p
    - name: dopaminium(1+)
    - compartment: p
    - charge: 1.0
    - formula: C8H12NO2
    - annotation: !!omap
      - biggr: dopa_p:1
      - chebi:
        - CHEBI:59905
      - sbo: SBO:0000247
  - !!omap
    - id: ala__L_c
    - name: L-alanine
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala__L_c:0
      - chebi:
        - CHEBI:57972
        - CHEBI:16977
      - sbo: SBO:0000247
  - !!omap
    - id: g3pc_p
    - name: choline alfoscerate
    - compartment: p
    - charge: 0.0
    - formula: C8H20NO6P
    - annotation: !!omap
      - biggr: g3pc_p:0
      - chebi:
        - CHEBI:16870
      - sbo: SBO:0000247
  - !!omap
    - id: h2co3_c
    - name: hydrogencarbonate
    - compartment: c
    - charge: -1.0
    - formula: CHO3
    - annotation: !!omap
      - biggr: h2co3_c:-1
      - chebi:
        - CHEBI:17544
      - sbo: SBO:0000247
  - !!omap
    - id: alaala_c
    - name: D-alanyl-D-alanine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C6H12N2O3
    - annotation: !!omap
      - biggr: alaala_c:0
      - chebi:
        - CHEBI:57822
        - CHEBI:16576
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm3p_p
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide
    - compartment: p
    - charge: -2.0
    - formula: C34H52N6O19
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm3p_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: spmd_p
    - name: spermidine(3+)
    - compartment: p
    - charge: 3.0
    - formula: C7H22N3
    - annotation: !!omap
      - biggr: spmd_p:3
      - chebi:
        - CHEBI:57834
      - sbo: SBO:0000247
  - !!omap
    - id: phe__L_c
    - name: L-phenylalanine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C9H11NO2
    - annotation: !!omap
      - biggr: phe__L_c:0
      - chebi:
        - CHEBI:58095
        - CHEBI:17295
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhm4p_c
    - name: 1,6-anhydrous-N-Acetylmuramyl-tetrapeptide
    - compartment: c
    - charge: -2.0
    - formula: C29H44N6O15
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhm4p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 15dap_c
    - name: cadaverine(2+)
    - compartment: c
    - charge: 2.0
    - formula: C5H16N2
    - annotation: !!omap
      - biggr: 15dap_c:2
      - chebi:
        - CHEBI:58384
      - sbo: SBO:0000247
  - !!omap
    - id: ni2_p
    - name: nickel(2+)
    - compartment: p
    - charge: 2.0
    - formula: Ni
    - annotation: !!omap
      - biggr: ni2_p:2
      - chebi:
        - CHEBI:49786
      - sbo: SBO:0000247
  - !!omap
    - id: ser__D_c
    - name: D-serine
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO3
    - annotation: !!omap
      - biggr: ser__D_c:0
      - chebi:
        - CHEBI:35247
        - CHEBI:16523
      - sbo: SBO:0000247
  - !!omap
    - id: udcpp_p
    - name: ditrans,polycis-undecaprenyl phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C55H89O4P
    - annotation: !!omap
      - biggr: udcpp_p:-2
      - chebi:
        - CHEBI:60392
      - sbo: SBO:0000247
  - !!omap
    - id: mlthf_c
    - name: (6R)-5,10-methylenetetrahydrofolate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C20H21N7O6
    - annotation: !!omap
      - biggr: mlthf_c:-2
      - chebi:
        - CHEBI:15636
      - sbo: SBO:0000247
  - !!omap
    - id: xmp_p
    - name: 5'-xanthylate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H11N4O9P
    - annotation: !!omap
      - biggr: xmp_p:-2
      - chebi:
        - CHEBI:57464
      - sbo: SBO:0000247
  - !!omap
    - id: mg2_p
    - name: magnesium(2+)
    - compartment: p
    - charge: 2.0
    - formula: Mg
    - annotation: !!omap
      - biggr: mg2_p:2
      - chebi:
        - CHEBI:18420
      - sbo: SBO:0000247
  - !!omap
    - id: pacald_e
    - name: phenylacetaldehyde
    - compartment: e
    - charge: 0.0
    - formula: C8H8O
    - annotation: !!omap
      - biggr: pacald_e:0
      - chebi:
        - CHEBI:16424
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm_c
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid
    - compartment: c
    - charge: -1.0
    - formula: C19H29N2O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: frdp_c
    - name: 2-trans,6-trans-farnesyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C15H25O7P2
    - annotation: !!omap
      - biggr: frdp_c:-3
      - chebi:
        - CHEBI:175763
      - sbo: SBO:0000247
  - !!omap
    - id: cyan_p
    - name: hydrogen cyanide
    - compartment: p
    - charge: 0.0
    - formula: CHN
    - annotation: !!omap
      - biggr: cyan_p:0
      - chebi:
        - CHEBI:18407
        - CHEBI:36856
      - sbo: SBO:0000247
  - !!omap
    - id: pant__R_c
    - name: (R)-pantoate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O4
    - annotation: !!omap
      - biggr: pant__R_c:-1
      - chebi:
        - CHEBI:15980
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__LalaDgluMdapDala_p
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine
    - compartment: p
    - charge: -1.0
    - formula: C18H30N5O9
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LalaDgluMdapDala_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: mercppyr_c
    - name: 3-mercaptopyruvate
    - compartment: c
    - charge: -1.0
    - formula: C3H3O3S
    - annotation: !!omap
      - biggr: mercppyr_c:-1
      - chebi:
        - CHEBI:57678
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__garagund_c
    - name: Glucosyl-O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl 
        diphosphate
    - compartment: c
    - charge: -2.0
    - formula: C77H125N1O22P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__garagund_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: glcur_c
    - name: D-glucopyranuronate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: glcur_c:-1
      - chebi:
        - CHEBI:58720
      - sbo: SBO:0000247
  - !!omap
    - id: udpg_p
    - name: UDP-alpha-D-glucose(2-)
    - compartment: p
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpg_p:-2
      - chebi:
        - CHEBI:58885
      - sbo: SBO:0000247
  - !!omap
    - id: inost_e
    - name: myo-inositol
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: inost_e:0
      - chebi:
        - CHEBI:17268
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dhbzs_e
    - name: Ferric 2,3-dihydroxybenzoylserine
    - compartment: e
    - charge: 2.0
    - formula: C10H10NO6Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dhbzs_e:2
      - sbo: SBO:0000247
  - !!omap
    - id: cytd_e
    - name: cytidine
    - compartment: e
    - charge: 0.0
    - formula: C9H13N3O5
    - annotation: !!omap
      - biggr: cytd_e:0
      - chebi:
        - CHEBI:17562
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16a3und_p
    - name: (O16 antigen)x3 undecaprenyl diphosphate
    - compartment: p
    - charge: -2.0
    - formula: C157H255N3O82P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16a3und_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: sulfac_p
    - name: sulfonatoacetate
    - compartment: p
    - charge: -2.0
    - formula: C2H2O5S
    - annotation: !!omap
      - biggr: sulfac_p:-2
      - chebi:
        - CHEBI:58824
      - sbo: SBO:0000247
  - !!omap
    - id: 2dmmql8_c
    - name: 2-demethylmenaquinol-8
    - compartment: c
    - charge: 0.0
    - formula: C50H72O2
    - annotation: !!omap
      - biggr: 2dmmql8_c:0
      - chebi:
        - CHEBI:61873
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__t3c7mrseACP_c
    - name: Trans-3-cis-7-myristoleoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C25H43N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__t3c7mrseACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: g3pe_c
    - name: glycerophosphatidylethanolamine
    - compartment: c
    - charge: 0.0
    - formula: C5H14NO6P
    - annotation: !!omap
      - biggr: g3pe_c:0
      - chebi:
        - CHEBI:52330
      - sbo: SBO:0000247
  - !!omap
    - id: cu2_c
    - name: copper(2+)
    - compartment: c
    - charge: 2.0
    - formula: Cu
    - annotation: !!omap
      - biggr: cu2_c:2
      - chebi:
        - CHEBI:29036
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__t3c11vaceACP_c
    - name: Trans-3-cis-11-vacceoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C29H51N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__t3c11vaceACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: tcynt_e
    - name: thiocyanate
    - compartment: e
    - charge: -1.0
    - formula: CNS
    - annotation: !!omap
      - biggr: tcynt_e:-1
      - chebi:
        - CHEBI:18022
      - sbo: SBO:0000247
  - !!omap
    - id: glyclt_e
    - name: glycolate
    - compartment: e
    - charge: -1.0
    - formula: C2H3O3
    - annotation: !!omap
      - biggr: glyclt_e:-1
      - chebi:
        - CHEBI:29805
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg180_c
    - name: Phosphatidylglycerol (dioctadecanoyl, n-C18:0)
    - compartment: c
    - charge: -1.0
    - formula: C42H82O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg180_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__S_e
    - name: (S)-propane-1,2-diol
    - compartment: e
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__S_e:0
      - chebi:
        - CHEBI:29002
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__14glucan_c
    - name: 1,4-alpha-D-glucan
    - compartment: c
    - charge: 0.0
    - formula: C36H62O31
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__14glucan_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdodec11eg_c
    - name: CDP-1,2-dioctadec-11-enoylglycerol
    - compartment: c
    - charge: -2.0
    - formula: C48H83N3O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdodec11eg_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: pyr5carb_c
    - name: (S)-1-pyrroline-5-carboxylate
    - compartment: c
    - charge: -1.0
    - formula: C5H6NO2
    - annotation: !!omap
      - biggr: pyr5carb_c:-1
      - chebi:
        - CHEBI:17388
      - sbo: SBO:0000247
  - !!omap
    - id: 1agpe160_p
    - name: 1-hexadecanoyl-sn-glycero-3-phosphoethanolamine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C21H44NO7P
    - annotation: !!omap
      - biggr: 1agpe160_p:0
      - chebi:
        - CHEBI:73004
        - CHEBI:73134
      - sbo: SBO:0000247
  - !!omap
    - id: prpnte_e
    - name: propionate
    - compartment: e
    - charge: -1.0
    - formula: C3H5O2
    - annotation: !!omap
      - biggr: prpnte_e:-1
      - chebi:
        - CHEBI:17272
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp120_p
    - name: Phosphatidylglycerophosphate (didodecanoyl, n-C12:0)
    - compartment: p
    - charge: -3.0
    - formula: C30H57O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp120_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: chtbs6p_c
    - name: diacetylchitobiose-6'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H27N2O14P
    - annotation: !!omap
      - biggr: chtbs6p_c:-2
      - chebi:
        - CHEBI:64883
      - sbo: SBO:0000247
  - !!omap
    - id: 1agpg180_p
    - name: 1-octadecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol)(1-)
    - compartment: p
    - charge: -1.0
    - formula: C24H48O9P
    - annotation: !!omap
      - biggr: 1agpg180_p:-1
      - chebi:
        - CHEBI:72827
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__acmum_p
    - name: N-Acetylmuramate
    - compartment: p
    - charge: -1.0
    - formula: C11H18NO8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__acmum_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: quin_p
    - name: (-)-quinic acid
    - compartment: p
    - charge: 0.0
    - formula: C7H12O6
    - annotation: !!omap
      - biggr: quin_p:0
      - chebi:
        - CHEBI:17521
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malttr_p
    - name: Maltotriose C18H32O16
    - compartment: p
    - charge: 0.0
    - formula: C18H32O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malttr_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: psclys_c
    - name: psicosyllysine(1+)
    - compartment: c
    - charge: 1.0
    - formula: C12H25N2O7
    - annotation: !!omap
      - biggr: psclys_c:1
      - chebi:
        - CHEBI:61403
      - sbo: SBO:0000247
  - !!omap
    - id: slnt_e
    - name: selenite(2-)
    - compartment: e
    - charge: -2.0
    - formula: O3Se
    - annotation: !!omap
      - biggr: slnt_e:-2
      - chebi:
        - CHEBI:18212
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__colipap_e
    - name: Core oligosaccharide lipid A diphosphate
    - compartment: e
    - charge: -12.0
    - formula: C176H303N2O103P5
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__colipap_e:-12
      - sbo: SBO:0000247
  - !!omap
    - id: acald_p
    - name: acetaldehyde
    - compartment: p
    - charge: 0.0
    - formula: C2H4O
    - annotation: !!omap
      - biggr: acald_p:0
      - chebi:
        - CHEBI:15343
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__moadcoo_c
    - name: MoaD Protein with carboxylate
    - compartment: c
    - charge: -1.0
    - formula: C1O2X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__moadcoo_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: gly_p
    - name: glycine
    - compartment: p
    - charge: 0.0
    - formula: C2H5NO2
    - annotation: !!omap
      - biggr: gly_p:0
      - chebi:
        - CHEBI:57305
        - CHEBI:15428
      - sbo: SBO:0000247
  - !!omap
    - id: dhgly_c
    - name: dehydroglycinate
    - compartment: c
    - charge: -1.0
    - formula: C2H2NO2
    - annotation: !!omap
      - biggr: dhgly_c:-1
      - chebi:
        - CHEBI:53664
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__lipopb_c
    - name: Lipoate (protein bound)
    - compartment: c
    - charge: 1.0
    - formula: C8H13OS2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__lipopb_c:1
      - sbo: SBO:0000247
  - !!omap
    - id: 2ippm_c
    - name: 2-isopropylmaleate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H8O4
    - annotation: !!omap
      - biggr: 2ippm_c:-2
      - chebi:
        - CHEBI:58085
      - sbo: SBO:0000247
  - !!omap
    - id: ser__D_p
    - name: D-serine
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO3
    - annotation: !!omap
      - biggr: ser__D_p:0
      - chebi:
        - CHEBI:35247
        - CHEBI:16523
      - sbo: SBO:0000247
  - !!omap
    - id: f_c
    - name: fluoride
    - compartment: c
    - charge: -1.0
    - formula: F
    - annotation: !!omap
      - biggr: f_c:-1
      - chebi:
        - CHEBI:17051
      - sbo: SBO:0000247
  - !!omap
    - id: o2s_p
    - name: superoxide
    - compartment: p
    - charge: -1.0
    - formula: O2
    - annotation: !!omap
      - biggr: o2s_p:-1
      - chebi:
        - CHEBI:18421
      - sbo: SBO:0000247
  - !!omap
    - id: 23cump_p
    - name: 2',3'-cyclic UMP(1-)
    - compartment: p
    - charge: -1.0
    - formula: C9H10N2O8P
    - annotation: !!omap
      - biggr: 23cump_p:-1
      - chebi:
        - CHEBI:60873
      - sbo: SBO:0000247
  - !!omap
    - id: 3psme_c
    - name: 5-O-(1-carboxylatovinyl)-3-phosphonatoshikimate
    - compartment: c
    - charge: -4.0
    - formula: C10H9O10P
    - annotation: !!omap
      - biggr: 3psme_c:-4
      - chebi:
        - CHEBI:57701
      - sbo: SBO:0000247
  - !!omap
    - id: imacp_c
    - name: 3-(imidazol-4-yl)-2-oxopropyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H7N2O5P
    - annotation: !!omap
      - biggr: imacp_c:-2
      - chebi:
        - CHEBI:57766
      - sbo: SBO:0000247
  - !!omap
    - id: 3c2hmp_c
    - name: (2R,3S)-3-isopropylmalate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H10O5
    - annotation: !!omap
      - biggr: 3c2hmp_c:-2
      - chebi:
        - CHEBI:35121
      - sbo: SBO:0000247
  - !!omap
    - id: xan_e
    - name: 7H-xanthine
    - compartment: e
    - charge: 0.0
    - formula: C5H4N4O2
    - annotation: !!omap
      - biggr: xan_e:0
      - chebi:
        - CHEBI:17712
        - CHEBI:48517
      - sbo: SBO:0000247
  - !!omap
    - id: udpLa4fn_c
    - name: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C15H21N3O16P2
    - annotation: !!omap
      - biggr: udpLa4fn_c:-2
      - chebi:
        - CHEBI:58709
      - sbo: SBO:0000247
  - !!omap
    - id: pser_c
    - name: O-phosphonato-L-serine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H6NO6P
    - annotation: !!omap
      - biggr: pser_c:-2
      - chebi:
        - CHEBI:57524
      - sbo: SBO:0000247
  - !!omap
    - id: uacgam_e
    - name: UDP-N-acetyl-alpha-D-glucosamine(2-)
    - compartment: e
    - charge: -2.0
    - formula: C17H25N3O17P2
    - annotation: !!omap
      - biggr: uacgam_e:-2
      - chebi:
        - CHEBI:57705
      - sbo: SBO:0000247
  - !!omap
    - id: ttdcea_e
    - name: myristoleate
    - compartment: e
    - charge: -1.0
    - formula: C14H25O2
    - annotation: !!omap
      - biggr: ttdcea_e:-1
      - chebi:
        - CHEBI:32370
      - sbo: SBO:0000247
  - !!omap
    - id: 4abut_c
    - name: gamma-aminobutyric acid
    - compartment: c
    - charge: 0.0
    - formula: C4H9NO2
    - annotation: !!omap
      - biggr: 4abut_c:0
      - chebi:
        - CHEBI:59888
        - CHEBI:16865
      - sbo: SBO:0000247
  - !!omap
    - id: tmam_c
    - name: trimethylammonium
    - compartment: c
    - charge: 1.0
    - formula: C3H10N
    - annotation: !!omap
      - biggr: tmam_c:1
      - chebi:
        - CHEBI:58389
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ocdcaACP_c
    - name: Octadecanoyl-ACP (n-C18:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C29H55N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ocdcaACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg160_c
    - name: Phosphatidylglycerol (dihexadecanoyl, n-C16:0)
    - compartment: c
    - charge: -1.0
    - formula: C38H74O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg160_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: gmp_c
    - name: guanosine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H12N5O8P
    - annotation: !!omap
      - biggr: gmp_c:-2
      - chebi:
        - CHEBI:58115
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr120_c
    - name: 1,2-dilauroyl-sn-glycerol
    - compartment: c
    - charge: 0.0
    - formula: C27H52O5
    - annotation: !!omap
      - biggr: 12dgr120_c:0
      - chebi:
        - CHEBI:183968
      - sbo: SBO:0000247
  - !!omap
    - id: uama_c
    - name: UDP-N-acetylmuramoyl-L-alaninate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C23H33N4O20P2
    - annotation: !!omap
      - biggr: uama_c:-3
      - chebi:
        - CHEBI:57953
      - sbo: SBO:0000247
  - !!omap
    - id: trp__L_p
    - name: L-tryptophan zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C11H12N2O2
    - annotation: !!omap
      - biggr: trp__L_p:0
      - chebi:
        - CHEBI:57912
        - CHEBI:16828
      - sbo: SBO:0000247
  - !!omap
    - id: gua_c
    - name: guanine
    - compartment: c
    - charge: 0.0
    - formula: C5H5N5O
    - annotation: !!omap
      - biggr: gua_c:0
      - chebi:
        - CHEBI:16235
      - sbo: SBO:0000247
  - !!omap
    - id: lcts_p
    - name: lactose
    - compartment: p
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: lcts_p:0
      - chebi:
        - CHEBI:17716
      - sbo: SBO:0000247
  - !!omap
    - id: pa160_p
    - name: 1,2-dihexadecanoyl-sn-glycerol-3-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C35H67O8P
    - annotation: !!omap
      - biggr: pa160_p:-2
      - chebi:
        - CHEBI:72859
      - sbo: SBO:0000247
  - !!omap
    - id: udcpdp_c
    - name: ditrans,polycis-undecaprenyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C55H89O7P2
    - annotation: !!omap
      - biggr: udcpdp_c:-3
      - chebi:
        - CHEBI:58405
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2odec11eg3p_c
    - name: 2-octadec-11-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C21H40O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2odec11eg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: fruur_e
    - name: D-fructofuranuronate
    - compartment: e
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: fruur_e:-1
      - chebi:
        - CHEBI:59863
      - sbo: SBO:0000247
  - !!omap
    - id: glu__D_c
    - name: D-glutamate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C5H8NO4
    - annotation: !!omap
      - biggr: glu__D_c:-1
      - chebi:
        - CHEBI:29986
      - sbo: SBO:0000247
  - !!omap
    - id: frulys_p
    - name: fructosyllysine(1+)
    - compartment: p
    - charge: 1.0
    - formula: C12H25N2O7
    - annotation: !!omap
      - biggr: frulys_p:1
      - chebi:
        - CHEBI:61393
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__R_p
    - name: (R)-propane-1,2-diol
    - compartment: p
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__R_p:0
      - chebi:
        - CHEBI:28972
      - sbo: SBO:0000247
  - !!omap
    - id: f6p_p
    - name: beta-D-fructofuranose 6-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: f6p_p:-2
      - chebi:
        - CHEBI:57634
      - sbo: SBO:0000247
  - !!omap
    - id: 3ophb_c
    - name: 4-hydroxy-3-octaprenylbenzoate
    - compartment: c
    - charge: -1.0
    - formula: C47H69O3
    - annotation: !!omap
      - biggr: 3ophb_c:-1
      - chebi:
        - CHEBI:1617
      - sbo: SBO:0000247
  - !!omap
    - id: kdo2lipid4_e
    - name: (KDO)2-lipid IVA(6-)
    - compartment: e
    - charge: -6.0
    - formula: C84H148N2O37P2
    - annotation: !!omap
      - biggr: kdo2lipid4_e:-6
      - chebi:
        - CHEBI:60365
      - sbo: SBO:0000247
  - !!omap
    - id: pmtcoa_c
    - name: palmitoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C37H62N7O17P3S
    - annotation: !!omap
      - biggr: pmtcoa_c:-4
      - chebi:
        - CHEBI:57379
      - sbo: SBO:0000247
  - !!omap
    - id: dump_e
    - name: dUMP(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H11N2O8P
    - annotation: !!omap
      - biggr: dump_e:-2
      - chebi:
        - CHEBI:246422
      - sbo: SBO:0000247
  - !!omap
    - id: 3dhsk_c
    - name: 3-dehydroshikimate
    - compartment: c
    - charge: -1.0
    - formula: C7H7O5
    - annotation: !!omap
      - biggr: 3dhsk_c:-1
      - chebi:
        - CHEBI:16630
      - sbo: SBO:0000247
  - !!omap
    - id: 3amp_p
    - name: 3'-AMP(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: 3amp_p:-2
      - chebi:
        - CHEBI:60880
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__acACP_c
    - name: Acetyl-ACP
    - compartment: c
    - charge: -1.0
    - formula: C13H23N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__acACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__kphphhlipa_c
    - name: Kdo-phospho-heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA
    - compartment: c
    - charge: -11.0
    - formula: C139H241N2O70P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__kphphhlipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: 5pg35pg_c
    - name: pGpG(3-)
    - compartment: c
    - charge: -3.0
    - formula: C20H23N10O15P2
    - annotation: !!omap
      - biggr: 5pg35pg_c:-3
      - chebi:
        - CHEBI:58754
      - sbo: SBO:0000247
  - !!omap
    - id: urate_p
    - name: 7H-purine-2,6,8-triol
    - compartment: p
    - charge: 0.0
    - formula: C5H4N4O3
    - annotation: !!omap
      - biggr: urate_p:0
      - chebi:
        - CHEBI:17775
        - CHEBI:46811
        - CHEBI:46817
        - CHEBI:46814
        - CHEBI:46823
        - CHEBI:49051
      - sbo: SBO:0000247
  - !!omap
    - id: udpgalfur_c
    - name: UDP-alpha-D-galactofuranose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpgalfur_c:-2
      - chebi:
        - CHEBI:66915
      - sbo: SBO:0000247
  - !!omap
    - id: h2o_c
    - name: water
    - compartment: c
    - charge: 0.0
    - formula: H2O
    - annotation: !!omap
      - biggr: h2o_c:0
      - chebi:
        - CHEBI:15377
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__gagicolipa_c
    - name: Galactosyl-glucosyl-inner core oligosaccharide lipid A
    - compartment: c
    - charge: -11.0
    - formula: C157H271N2O84P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__gagicolipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feenter_p
    - name: Fe-enterobactin
    - compartment: p
    - charge: 3.0
    - formula: C30H27FeN3O15
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feenter_p:3
      - sbo: SBO:0000247
  - !!omap
    - id: hg2_p
    - name: mercury(2+)
    - compartment: p
    - charge: 2.0
    - formula: Hg
    - annotation: !!omap
      - biggr: hg2_p:2
      - chebi:
        - CHEBI:16793
      - sbo: SBO:0000247
  - !!omap
    - id: ala__D_c
    - name: D-alanine
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala__D_c:0
      - chebi:
        - CHEBI:57416
        - CHEBI:15570
      - sbo: SBO:0000247
  - !!omap
    - id: glcr_p
    - name: D-glucarate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H8O8
    - annotation: !!omap
      - biggr: glcr_p:-2
      - chebi:
        - CHEBI:30612
      - sbo: SBO:0000247
  - !!omap
    - id: alac__S_c
    - name: (2S)-2-hydroxy-2-methyl-3-oxobutanoate
    - compartment: c
    - charge: -1.0
    - formula: C5H7O4
    - annotation: !!omap
      - biggr: alac__S_c:-1
      - chebi:
        - CHEBI:58476
      - sbo: SBO:0000247
  - !!omap
    - id: 2amsa_c
    - name: L-3-oxoalanine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C3H5NO3
    - annotation: !!omap
      - biggr: 2amsa_c:0
      - chebi:
        - CHEBI:77662
        - CHEBI:37012
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbaox_p
    - name: Periplasmic protein disulfide isomerase I (oxidized)
    - compartment: p
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbaox_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: tre_p
    - name: alpha,alpha-trehalose
    - compartment: p
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: tre_p:0
      - chebi:
        - CHEBI:16551
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa161_p
    - name: 1,2-dihexadec-9-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C35H63O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa161_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: dcdp_c
    - name: dCDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H12N3O10P2
    - annotation: !!omap
      - biggr: dcdp_c:-3
      - chebi:
        - CHEBI:58593
      - sbo: SBO:0000247
  - !!omap
    - id: imp_e
    - name: IMP(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H11N4O8P
    - annotation: !!omap
      - biggr: imp_e:-2
      - chebi:
        - CHEBI:58053
      - sbo: SBO:0000247
  - !!omap
    - id: db4p_c
    - name: (2S)-2-hydroxy-3-oxobutyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H7O6P
    - annotation: !!omap
      - biggr: db4p_c:-2
      - chebi:
        - CHEBI:58830
      - sbo: SBO:0000247
  - !!omap
    - id: ca2_c
    - name: calcium(2+)
    - compartment: c
    - charge: 2.0
    - formula: Ca
    - annotation: !!omap
      - biggr: ca2_c:2
      - chebi:
        - CHEBI:29108
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feoxam_un_p
    - name: Ferroxamine minus Fe(3)
    - compartment: p
    - charge: -2.0
    - formula: C25H46N6O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feoxam_un_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: galctn__L_p
    - name: L-galactonate
    - compartment: p
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: galctn__L_p:-1
      - chebi:
        - CHEBI:53071
      - sbo: SBO:0000247
  - !!omap
    - id: nmn_c
    - name: NMN(-)
    - compartment: c
    - charge: -1.0
    - formula: C11H14N2O8P
    - annotation: !!omap
      - biggr: nmn_c:-1
      - chebi:
        - CHEBI:14649
      - sbo: SBO:0000247
  - !!omap
    - id: gal1p_e
    - name: alpha-D-galactose 1-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: gal1p_e:-2
      - chebi:
        - CHEBI:58336
      - sbo: SBO:0000247
  - !!omap
    - id: gly_c
    - name: glycine
    - compartment: c
    - charge: 0.0
    - formula: C2H5NO2
    - annotation: !!omap
      - biggr: gly_c:0
      - chebi:
        - CHEBI:57305
        - CHEBI:15428
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2fe1s_c
    - name: '[2Fe-1S] desulfurated iron-sulfur cluster'
    - compartment: c
    - charge: 2.0
    - formula: SFe2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2fe1s_c:2
      - sbo: SBO:0000247
  - !!omap
    - id: LalaDglu_c
    - name: L-alanyl-D-glutamate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaDglu_c:-1
      - chebi:
        - CHEBI:61395
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__flxso_c
    - name: Flavodoxin semi oxidized
    - compartment: c
    - charge: 0.0
    - formula: XH
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__flxso_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: h2o2_c
    - name: hydrogen peroxide
    - compartment: c
    - charge: 0.0
    - formula: H2O2
    - annotation: !!omap
      - biggr: h2o2_c:0
      - chebi:
        - CHEBI:16240
      - sbo: SBO:0000247
  - !!omap
    - id: malcoa_c
    - name: malonyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C24H33N7O19P3S
    - annotation: !!omap
      - biggr: malcoa_c:-5
      - chebi:
        - CHEBI:57384
      - sbo: SBO:0000247
  - !!omap
    - id: fru_p
    - name: beta-D-fructofuranose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: fru_p:0
      - chebi:
        - CHEBI:28645
      - sbo: SBO:0000247
  - !!omap
    - id: xyl__D_e
    - name: D-xylopyranose
    - compartment: e
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xyl__D_e:0
      - chebi:
        - CHEBI:53455
      - sbo: SBO:0000247
  - !!omap
    - id: galctn__D_e
    - name: D-galactonate
    - compartment: e
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: galctn__D_e:-1
      - chebi:
        - CHEBI:12931
      - sbo: SBO:0000247
  - !!omap
    - id: gal_c
    - name: alpha-D-galactose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: gal_c:0
      - chebi:
        - CHEBI:28061
      - sbo: SBO:0000247
  - !!omap
    - id: phom_c
    - name: O-phosphonato-L-homoserine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H8NO6P
    - annotation: !!omap
      - biggr: phom_c:-2
      - chebi:
        - CHEBI:57590
      - sbo: SBO:0000247
  - !!omap
    - id: glc__D_e
    - name: D-glucopyranose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: glc__D_e:0
      - chebi:
        - CHEBI:4167
      - sbo: SBO:0000247
  - !!omap
    - id: indole_p
    - name: 3H-indole
    - compartment: p
    - charge: 0.0
    - formula: C8H7N
    - annotation: !!omap
      - biggr: indole_p:0
      - chebi:
        - CHEBI:16881
        - CHEBI:35579
      - sbo: SBO:0000247
  - !!omap
    - id: 3odcoa_c
    - name: 3-oxodecanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C31H48N7O18P3S
    - annotation: !!omap
      - biggr: 3odcoa_c:-4
      - chebi:
        - CHEBI:62548
      - sbo: SBO:0000247
  - !!omap
    - id: fmnh2_c
    - name: FMNH2(2-)
    - compartment: c
    - charge: -2.0
    - formula: C17H21N4O9P
    - annotation: !!omap
      - biggr: fmnh2_c:-2
      - chebi:
        - CHEBI:57618
      - sbo: SBO:0000247
  - !!omap
    - id: ppal_c
    - name: propanal
    - compartment: c
    - charge: 0.0
    - formula: C3H6O
    - annotation: !!omap
      - biggr: ppal_c:0
      - chebi:
        - CHEBI:17153
      - sbo: SBO:0000247
  - !!omap
    - id: ugmda_c
    - name: 
        UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alaninate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C41H61N9O28P2
    - annotation: !!omap
      - biggr: ugmda_c:-4
      - chebi:
        - CHEBI:61386
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr161_c
    - name: 1,2-di-palmitoleoyl-2-sn-glycerol
    - compartment: c
    - charge: 0.0
    - formula: C35H64O5
    - annotation: !!omap
      - biggr: 12dgr161_c:0
      - chebi:
        - CHEBI:84417
      - sbo: SBO:0000247
  - !!omap
    - id: mobd_e
    - name: molybdate
    - compartment: e
    - charge: -2.0
    - formula: MoO4
    - annotation: !!omap
      - biggr: mobd_e:-2
      - chebi:
        - CHEBI:36264
      - sbo: SBO:0000247
  - !!omap
    - id: g3pi_e
    - name: 1-(sn-glycero-3-O-phosphonato)-1D-myo-inositol
    - compartment: e
    - charge: -1.0
    - formula: C9H18O11P
    - annotation: !!omap
      - biggr: g3pi_e:-1
      - chebi:
        - CHEBI:58444
      - sbo: SBO:0000247
  - !!omap
    - id: nh4_e
    - name: ammonium
    - compartment: e
    - charge: 1.0
    - formula: H4N
    - annotation: !!omap
      - biggr: nh4_e:1
      - chebi:
        - CHEBI:28938
      - sbo: SBO:0000247
  - !!omap
    - id: tartr__D_c
    - name: D-tartrate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H4O6
    - annotation: !!omap
      - biggr: tartr__D_c:-2
      - chebi:
        - CHEBI:30927
      - sbo: SBO:0000247
  - !!omap
    - id: g3pc_e
    - name: choline alfoscerate
    - compartment: e
    - charge: 0.0
    - formula: C8H20NO6P
    - annotation: !!omap
      - biggr: g3pc_e:0
      - chebi:
        - CHEBI:16870
      - sbo: SBO:0000247
  - !!omap
    - id: 3oxdhscoa_c
    - name: 3-oxo-5,6-dehydrosuberyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C29H39N7O20P3S
    - annotation: !!omap
      - biggr: 3oxdhscoa_c:-5
      - chebi:
        - CHEBI:63255
      - sbo: SBO:0000247
  - !!omap
    - id: 23camp_p
    - name: 2',3'-cyclic AMP(1-)
    - compartment: p
    - charge: -1.0
    - formula: C10H11N5O6P
    - annotation: !!omap
      - biggr: 23camp_p:-1
      - chebi:
        - CHEBI:60879
      - sbo: SBO:0000247
  - !!omap
    - id: idp_c
    - name: IDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H11N4O11P2
    - annotation: !!omap
      - biggr: idp_c:-3
      - chebi:
        - CHEBI:58280
      - sbo: SBO:0000247
  - !!omap
    - id: gslnt_c
    - name: glutathioselenol(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H16N3O6SSe
    - annotation: !!omap
      - biggr: gslnt_c:-1
      - chebi:
        - CHEBI:71265
      - sbo: SBO:0000247
  - !!omap
    - id: ahdt_c
    - name: 7,8-dihydroneopterin 3'-triphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C9H12N5O13P3
    - annotation: !!omap
      - biggr: ahdt_c:-4
      - chebi:
        - CHEBI:58462
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__uLa4n_c
    - name: Undecaprenyl phosphate-4-amino-4-deoxy-L-arabinose
    - compartment: c
    - charge: 0.0
    - formula: C60H100N1O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__uLa4n_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: hdca_e
    - name: hexadecanoate
    - compartment: e
    - charge: -1.0
    - formula: C16H31O2
    - annotation: !!omap
      - biggr: hdca_e:-1
      - chebi:
        - CHEBI:7896
      - sbo: SBO:0000247
  - !!omap
    - id: ampnt_c
    - name: (aminomethyl)phosphonate(1-)
    - compartment: c
    - charge: -1.0
    - formula: CH5NO3P
    - annotation: !!omap
      - biggr: ampnt_c:-1
      - chebi:
        - CHEBI:133674
      - sbo: SBO:0000247
  - !!omap
    - id: cenchddd_c
    - name: (E)-3-[(5S,6R)-5,6-dihydroxycyclohexa-1,3-dienyl]acrylate
    - compartment: c
    - charge: -1.0
    - formula: C9H9O4
    - annotation: !!omap
      - biggr: cenchddd_c:-1
      - chebi:
        - CHEBI:61451
      - sbo: SBO:0000247
  - !!omap
    - id: tyrp_p
    - name: O(4)-phosphonatotyrosine(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H10NO6P
    - annotation: !!omap
      - biggr: tyrp_p:-2
      - chebi:
        - CHEBI:74955
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps181_c
    - name: Phosphatidylserine (dioctadec-11-enoyl, n-C18:1)
    - compartment: c
    - charge: -1.0
    - formula: C42H77N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps181_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: f6p_c
    - name: beta-D-fructofuranose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: f6p_c:-2
      - chebi:
        - CHEBI:57634
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp140_p
    - name: Phosphatidylglycerophosphate (ditetradecanoyl, n-C14:0)
    - compartment: p
    - charge: -3.0
    - formula: C34H65O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp140_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: uacmamu_c
    - name: UDP-N-acetyl-alpha-D-mannosaminouronate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C17H22N3O18P2
    - annotation: !!omap
      - biggr: uacmamu_c:-3
      - chebi:
        - CHEBI:70731
      - sbo: SBO:0000247
  - !!omap
    - id: ametam_c
    - name: S-adenosylmethioninaminium
    - compartment: c
    - charge: 2.0
    - formula: C14H24N6O3S
    - annotation: !!omap
      - biggr: ametam_c:2
      - chebi:
        - CHEBI:57443
      - sbo: SBO:0000247
  - !!omap
    - id: hxcoa_c
    - name: hexanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C27H42N7O17P3S
    - annotation: !!omap
      - biggr: hxcoa_c:-4
      - chebi:
        - CHEBI:62620
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg141_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1)
    - compartment: c
    - charge: -1.0
    - formula: C20H38O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg141_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cynt_p
    - name: cyanate
    - compartment: p
    - charge: -1.0
    - formula: CNO
    - annotation: !!omap
      - biggr: cynt_p:-1
      - chebi:
        - CHEBI:29195
      - sbo: SBO:0000247
  - !!omap
    - id: 3hcinnm_p
    - name: trans-3-coumarate
    - compartment: p
    - charge: -1.0
    - formula: C9H7O3
    - annotation: !!omap
      - biggr: 3hcinnm_p:-1
      - chebi:
        - CHEBI:47928
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg161_c
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1)
    - compartment: c
    - charge: -1.0
    - formula: C22H42O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg161_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pphn_c
    - name: prephenate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H8O6
    - annotation: !!omap
      - biggr: pphn_c:-2
      - chebi:
        - CHEBI:29934
        - CHEBI:57852
      - sbo: SBO:0000247
  - !!omap
    - id: cysi__L_p
    - name: L-cystine
    - compartment: p
    - charge: 0.0
    - formula: C6H12N2O4S2
    - annotation: !!omap
      - biggr: cysi__L_p:0
      - chebi:
        - CHEBI:35491
        - CHEBI:16283
      - sbo: SBO:0000247
  - !!omap
    - id: ura_p
    - name: uracil
    - compartment: p
    - charge: 0.0
    - formula: C4H4N2O2
    - annotation: !!omap
      - biggr: ura_p:0
      - chebi:
        - CHEBI:17568
      - sbo: SBO:0000247
  - !!omap
    - id: fald_e
    - name: formaldehyde
    - compartment: e
    - charge: 0.0
    - formula: CH2O
    - annotation: !!omap
      - biggr: fald_e:0
      - chebi:
        - CHEBI:16842
      - sbo: SBO:0000247
  - !!omap
    - id: prlp_c
    - name: 
        5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide(4-)
    - compartment: c
    - charge: -4.0
    - formula: C15H21N5O15P2
    - annotation: !!omap
      - biggr: prlp_c:-4
      - chebi:
        - CHEBI:58525
      - sbo: SBO:0000247
  - !!omap
    - id: uacgam_p
    - name: UDP-N-acetyl-alpha-D-glucosamine(2-)
    - compartment: p
    - charge: -2.0
    - formula: C17H25N3O17P2
    - annotation: !!omap
      - biggr: uacgam_p:-2
      - chebi:
        - CHEBI:57705
      - sbo: SBO:0000247
  - !!omap
    - id: 2ddara_c
    - name: 2-dehydro-3-deoxy-D-arabinonate
    - compartment: c
    - charge: -1.0
    - formula: C5H7O5
    - annotation: !!omap
      - biggr: 2ddara_c:-1
      - chebi:
        - CHEBI:16699
      - sbo: SBO:0000247
  - !!omap
    - id: 2mahmp_c
    - name: 4-amino-2-methyl-5-diphosphonatooxymethylpyrimidine(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H8N3O7P2
    - annotation: !!omap
      - biggr: 2mahmp_c:-3
      - chebi:
        - CHEBI:57841
      - sbo: SBO:0000247
  - !!omap
    - id: s7p_c
    - name: sedoheptulose 7-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H13O10P
    - annotation: !!omap
      - biggr: s7p_c:-2
      - chebi:
        - CHEBI:57483
      - sbo: SBO:0000247
  - !!omap
    - id: prfp_c
    - name: 
        1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide(4-)
    - compartment: c
    - charge: -4.0
    - formula: C15H21N5O15P2
    - annotation: !!omap
      - biggr: prfp_c:-4
      - chebi:
        - CHEBI:58435
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5p5p5p_p
    - name: Three linked disacharide pentapeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: p
    - charge: -6.0
    - formula: C120H186N24O63
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5p5p5p_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: nicrnt_c
    - name: nicotinate D-ribonucleotide(2-)
    - compartment: c
    - charge: -2.0
    - formula: C11H12NO9P
    - annotation: !!omap
      - biggr: nicrnt_c:-2
      - chebi:
        - CHEBI:57502
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein4px4p_p
    - name: Two disacharide linked murein units, tetrapeptide corsslinked 
        tetrapeptide (A2pm->D-ala) (middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C74H112N14O39
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein4px4p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: csn_e
    - name: cytosine
    - compartment: e
    - charge: 0.0
    - formula: C4H5N3O
    - annotation: !!omap
      - biggr: csn_e:0
      - chebi:
        - CHEBI:16040
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tmrs2eACP_c
    - name: Trans-Tetradec-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C25H45N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tmrs2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: o2_e
    - name: dioxygen
    - compartment: e
    - charge: 0.0
    - formula: O2
    - annotation: !!omap
      - biggr: o2_e:0
      - chebi:
        - CHEBI:15379
      - sbo: SBO:0000247
  - !!omap
    - id: pe180_c
    - name: 1,2-distearoylphosphatidylethanolamine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C41H82NO8P
    - annotation: !!omap
      - biggr: pe180_c:0
      - chebi:
        - CHEBI:47768
        - CHEBI:47764
      - sbo: SBO:0000247
  - !!omap
    - id: kdo8p_c
    - name: 3-deoxy-alpha-D-manno-2-octulosonate-8-phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C8H12O11P
    - annotation: !!omap
      - biggr: kdo8p_c:-3
      - chebi:
        - CHEBI:85985
      - sbo: SBO:0000247
  - !!omap
    - id: succ_e
    - name: succinate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H4O4
    - annotation: !!omap
      - biggr: succ_e:-2
      - chebi:
        - CHEBI:30031
      - sbo: SBO:0000247
  - !!omap
    - id: ser__L_e
    - name: L-serine
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO3
    - annotation: !!omap
      - biggr: ser__L_e:0
      - chebi:
        - CHEBI:33384
        - CHEBI:17115
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpg180_c
    - name: Cyclopropane phosphatidylglycerol (dioctadec-11,12-cyclo-anoyl, 
        n-C18:0 cyclo)
    - compartment: c
    - charge: -1.0
    - formula: C44H82O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpg180_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: mql8_c
    - name: menaquinol-8
    - compartment: c
    - charge: 0.0
    - formula: C51H74O2
    - annotation: !!omap
      - biggr: mql8_c:0
      - chebi:
        - CHEBI:61684
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg120_p
    - name: Phosphatidylglycerol (didodecanoyl, n-C12:0)
    - compartment: p
    - charge: -1.0
    - formula: C30H58O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg120_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: amob_c
    - name: S-adenosyl-4-methylthio-2-oxobutanoate
    - compartment: c
    - charge: 0.0
    - formula: C15H19N5O6S
    - annotation: !!omap
      - biggr: amob_c:0
      - chebi:
        - CHEBI:16490
      - sbo: SBO:0000247
  - !!omap
    - id: xtsn_e
    - name: xanthosine
    - compartment: e
    - charge: 0.0
    - formula: C10H12N4O6
    - annotation: !!omap
      - biggr: xtsn_e:0
      - chebi:
        - CHEBI:18107
      - sbo: SBO:0000247
  - !!omap
    - id: ttdca_e
    - name: tetradecanoate
    - compartment: e
    - charge: -1.0
    - formula: C14H27O2
    - annotation: !!omap
      - biggr: ttdca_e:-1
      - chebi:
        - CHEBI:30807
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2hdec9eg3p_c
    - name: 2-hexadec-9-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -1.0
    - formula: C19H36O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2hdec9eg3p_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 5dglcn_c
    - name: 5-dehydro-D-gluconate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: 5dglcn_c:-1
      - chebi:
        - CHEBI:58143
      - sbo: SBO:0000247
  - !!omap
    - id: cl_c
    - name: chloride
    - compartment: c
    - charge: -1.0
    - formula: Cl
    - annotation: !!omap
      - biggr: cl_c:-1
      - chebi:
        - CHEBI:17996
      - sbo: SBO:0000247
  - !!omap
    - id: 2oxpaccoa_c
    - name: 2-oxepin-2(3H)-ylideneacetyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H38N7O18P3S
    - annotation: !!omap
      - biggr: 2oxpaccoa_c:-4
      - chebi:
        - CHEBI:63252
      - sbo: SBO:0000247
  - !!omap
    - id: mmcoa__S_c
    - name: (S)-methylmalonyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C25H35N7O19P3S
    - annotation: !!omap
      - biggr: mmcoa__S_c:-5
      - chebi:
        - CHEBI:57327
      - sbo: SBO:0000247
  - !!omap
    - id: glyc__R_c
    - name: D-glycerate
    - compartment: c
    - charge: -1.0
    - formula: C3H5O4
    - annotation: !!omap
      - biggr: glyc__R_c:-1
      - chebi:
        - CHEBI:16659
      - sbo: SBO:0000247
  - !!omap
    - id: mmet_e
    - name: S-methyl-L-methionine
    - compartment: e
    - charge: 1.0
    - formula: C6H14NO2S
    - annotation: !!omap
      - biggr: mmet_e:1
      - chebi:
        - CHEBI:58252
        - CHEBI:17728
      - sbo: SBO:0000247
  - !!omap
    - id: dms_c
    - name: dimethyl sulfide
    - compartment: c
    - charge: 0.0
    - formula: C2H6S
    - annotation: !!omap
      - biggr: dms_c:0
      - chebi:
        - CHEBI:17437
      - sbo: SBO:0000247
  - !!omap
    - id: g6p_c
    - name: D-glucopyranose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: g6p_c:-2
      - chebi:
        - CHEBI:61548
      - sbo: SBO:0000247
  - !!omap
    - id: N1aspmd_c
    - name: N(1)-acetylspermidinium(2+)
    - compartment: c
    - charge: 2.0
    - formula: C9H23N3O
    - annotation: !!omap
      - biggr: N1aspmd_c:2
      - chebi:
        - CHEBI:58324
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__trdrd_c
    - name: Reduced thioredoxin
    - compartment: c
    - charge: 0.0
    - formula: XH2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__trdrd_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 2dh3dgal_c
    - name: 2-dehydro-3-deoxy-D-galactonate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O6
    - annotation: !!omap
      - biggr: 2dh3dgal_c:-1
      - chebi:
        - CHEBI:57989
      - sbo: SBO:0000247
  - !!omap
    - id: methf_c
    - name: (6R)-5,10-methenyltetrahydrofolate
    - compartment: c
    - charge: -1.0
    - formula: C20H20N7O6
    - annotation: !!omap
      - biggr: methf_c:-1
      - chebi:
        - CHEBI:57455
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ddcaACP_c
    - name: Dodecanoyl-ACP (n-C12:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C23H43N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ddcaACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: mnl1p_c
    - name: D-mannitol 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H13O9P
    - annotation: !!omap
      - biggr: mnl1p_c:-2
      - chebi:
        - CHEBI:61381
      - sbo: SBO:0000247
  - !!omap
    - id: agm_c
    - name: agmatinium(2+)
    - compartment: c
    - charge: 2.0
    - formula: C5H16N4
    - annotation: !!omap
      - biggr: agm_c:2
      - chebi:
        - CHEBI:58145
      - sbo: SBO:0000247
  - !!omap
    - id: ala__L_p
    - name: L-alanine
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala__L_p:0
      - chebi:
        - CHEBI:57972
        - CHEBI:16977
      - sbo: SBO:0000247
  - !!omap
    - id: prpp_c
    - name: 5-O-phosphonato-alpha-D-ribofuranosyl diphosphate(5-)
    - compartment: c
    - charge: -5.0
    - formula: C5H8O14P3
    - annotation: !!omap
      - biggr: prpp_c:-5
      - chebi:
        - CHEBI:58017
      - sbo: SBO:0000247
  - !!omap
    - id: hkndd_c
    - name: 2-hydroxy-6-oxonona-2,4-dienedioate
    - compartment: c
    - charge: -2.0
    - formula: C9H8O6
    - annotation: !!omap
      - biggr: hkndd_c:-2
      - chebi:
        - CHEBI:19615
      - sbo: SBO:0000247
  - !!omap
    - id: galur_p
    - name: aldehydo-D-galacturonate
    - compartment: p
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: galur_p:-1
      - chebi:
        - CHEBI:12952
      - sbo: SBO:0000247
  - !!omap
    - id: all6p_c
    - name: D-allose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: all6p_c:-2
      - chebi:
        - CHEBI:58328
      - sbo: SBO:0000247
  - !!omap
    - id: allul6p_c
    - name: D-psicose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: allul6p_c:-2
      - chebi:
        - CHEBI:61519
      - sbo: SBO:0000247
  - !!omap
    - id: histd_c
    - name: L-histidinol(1+)
    - compartment: c
    - charge: 1.0
    - formula: C6H12N3O
    - annotation: !!omap
      - biggr: histd_c:1
      - chebi:
        - CHEBI:57699
      - sbo: SBO:0000247
  - !!omap
    - id: for_p
    - name: formate
    - compartment: p
    - charge: -1.0
    - formula: CHO2
    - annotation: !!omap
      - biggr: for_p:-1
      - chebi:
        - CHEBI:15740
      - sbo: SBO:0000247
  - !!omap
    - id: orot_c
    - name: orotate
    - compartment: c
    - charge: -1.0
    - formula: C5H3N2O4
    - annotation: !!omap
      - biggr: orot_c:-1
      - chebi:
        - CHEBI:30839
      - sbo: SBO:0000247
  - !!omap
    - id: galt_p
    - name: galactitol
    - compartment: p
    - charge: 0.0
    - formula: C6H14O6
    - annotation: !!omap
      - biggr: galt_p:0
      - chebi:
        - CHEBI:16813
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fecrm_e
    - name: Ferrichrome
    - compartment: e
    - charge: 0.0
    - formula: C27H42FeN9O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fecrm_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: glc__D_p
    - name: D-glucopyranose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: glc__D_p:0
      - chebi:
        - CHEBI:4167
      - sbo: SBO:0000247
  - !!omap
    - id: damp_c
    - name: 2'-deoxyadenosine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H12N5O6P
    - annotation: !!omap
      - biggr: damp_c:-2
      - chebi:
        - CHEBI:58245
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fmn_c
    - name: FMN C17H19N4O9P
    - compartment: c
    - charge: -2.0
    - formula: C17H19N4O9P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fmn_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: mal__D_e
    - name: (R)-malate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H4O5
    - annotation: !!omap
      - biggr: mal__D_e:-2
      - chebi:
        - CHEBI:15588
      - sbo: SBO:0000247
  - !!omap
    - id: 3oddcoa_c
    - name: 3-oxolauroyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C33H52N7O18P3S
    - annotation: !!omap
      - biggr: 3oddcoa_c:-4
      - chebi:
        - CHEBI:62615
      - sbo: SBO:0000247
  - !!omap
    - id: phe__L_p
    - name: L-phenylalanine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C9H11NO2
    - annotation: !!omap
      - biggr: phe__L_p:0
      - chebi:
        - CHEBI:58095
        - CHEBI:17295
      - sbo: SBO:0000247
  - !!omap
    - id: g3pg_p
    - name: sn-glycero-3-phosphoglycerol(1-)
    - compartment: p
    - charge: -1.0
    - formula: C6H14O8P
    - annotation: !!omap
      - biggr: g3pg_p:-1
      - chebi:
        - CHEBI:84515
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tsul_p
    - name: Thiosulfate
    - compartment: p
    - charge: -2.0
    - formula: O3S2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tsul_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__trnaglu_c
    - name: TRNA (Glu)
    - compartment: c
    - charge: 0.0
    - formula: R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__trnaglu_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: ppgpp_c
    - name: guanosine 3',5'-bis(diphosphate)(6-)
    - compartment: c
    - charge: -6.0
    - formula: C10H11N5O17P4
    - annotation: !!omap
      - biggr: ppgpp_c:-6
      - chebi:
        - CHEBI:58215
      - sbo: SBO:0000247
  - !!omap
    - id: ins_e
    - name: inosine
    - compartment: e
    - charge: 0.0
    - formula: C10H12N4O5
    - annotation: !!omap
      - biggr: ins_e:0
      - chebi:
        - CHEBI:17596
      - sbo: SBO:0000247
  - !!omap
    - id: thm_p
    - name: thiamine(1+)
    - compartment: p
    - charge: 1.0
    - formula: C12H17N4OS
    - annotation: !!omap
      - biggr: thm_p:1
      - chebi:
        - CHEBI:18385
      - sbo: SBO:0000247
  - !!omap
    - id: eths_c
    - name: ethanesulfonate
    - compartment: c
    - charge: -1.0
    - formula: C2H5O3S
    - annotation: !!omap
      - biggr: eths_c:-1
      - chebi:
        - CHEBI:61909
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__arbtn_fe3_e
    - name: Aerobactin
    - compartment: e
    - charge: 0.0
    - formula: C22H33FeN4O13
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__arbtn_fe3_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: q8_c
    - name: ubiquinone-8
    - compartment: c
    - charge: 0.0
    - formula: C49H74O4
    - annotation: !!omap
      - biggr: q8_c:0
      - chebi:
        - CHEBI:61683
      - sbo: SBO:0000247
  - !!omap
    - id: acgam1p_p
    - name: N-acetyl-alpha-D-glucosamine 1-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acgam1p_p:-2
      - chebi:
        - CHEBI:57776
      - sbo: SBO:0000247
  - !!omap
    - id: orn__L_c
    - name: L-ornithinium(1+)
    - compartment: c
    - charge: 1.0
    - formula: C5H13N2O2
    - annotation: !!omap
      - biggr: orn__L_c:1
      - chebi:
        - CHEBI:46911
      - sbo: SBO:0000247
  - !!omap
    - id: cl_e
    - name: chloride
    - compartment: e
    - charge: -1.0
    - formula: Cl
    - annotation: !!omap
      - biggr: cl_e:-1
      - chebi:
        - CHEBI:17996
      - sbo: SBO:0000247
  - !!omap
    - id: stcoa_c
    - name: stearoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C39H66N7O17P3S
    - annotation: !!omap
      - biggr: stcoa_c:-4
      - chebi:
        - CHEBI:57394
      - sbo: SBO:0000247
  - !!omap
    - id: 2ombzl_c
    - name: 6-methoxy-2-octaprenylhydroquinone
    - compartment: c
    - charge: 0.0
    - formula: C47H72O3
    - annotation: !!omap
      - biggr: 2ombzl_c:0
      - chebi:
        - CHEBI:60655
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5px4p_p
    - name: Two disacharide linked murein units, pentapeptide crosslinked 
        tetrapeptide (A2pm->D-ala) (middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C77H117N15O40
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5px4p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: gthox_e
    - name: glutathione disulfide(2-)
    - compartment: e
    - charge: -2.0
    - formula: C20H30N6O12S2
    - annotation: !!omap
      - biggr: gthox_e:-2
      - chebi:
        - CHEBI:58297
      - sbo: SBO:0000247
  - !!omap
    - id: damp_p
    - name: 2'-deoxyadenosine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H12N5O6P
    - annotation: !!omap
      - biggr: damp_p:-2
      - chebi:
        - CHEBI:58245
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dcaACP_c
    - name: Decanoyl-ACP (n-C10:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C21H39N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dcaACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 3gmp_e
    - name: guanosine 3'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H12N5O8P
    - annotation: !!omap
      - biggr: 3gmp_e:-2
      - chebi:
        - CHEBI:60732
      - sbo: SBO:0000247
  - !!omap
    - id: etha_c
    - name: ethanolaminium(1+)
    - compartment: c
    - charge: 1.0
    - formula: C2H8NO
    - annotation: !!omap
      - biggr: etha_c:1
      - chebi:
        - CHEBI:57603
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hcddec5eACP_c
    - name: (R)-3-hydroxy-cis-dodec-5-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C23H41N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hcddec5eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: betald_c
    - name: betaine aldehyde
    - compartment: c
    - charge: 1.0
    - formula: C5H12NO
    - annotation: !!omap
      - biggr: betald_c:1
      - chebi:
        - CHEBI:15710
      - sbo: SBO:0000247
  - !!omap
    - id: udpglcur_p
    - name: UDP-alpha-D-glucuronate(3-)
    - compartment: p
    - charge: -3.0
    - formula: C15H19N2O18P2
    - annotation: !!omap
      - biggr: udpglcur_p:-3
      - chebi:
        - CHEBI:58052
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg140_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0)
    - compartment: p
    - charge: -1.0
    - formula: C20H40O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg140_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tddec2eACP_c
    - name: Trans-Dodec-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C23H41N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tddec2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: hdca_c
    - name: hexadecanoate
    - compartment: c
    - charge: -1.0
    - formula: C16H31O2
    - annotation: !!omap
      - biggr: hdca_c:-1
      - chebi:
        - CHEBI:7896
      - sbo: SBO:0000247
  - !!omap
    - id: 1agpe180_p
    - name: 1-stearoyl-sn-glycero-3-phosphoethanolamine
    - compartment: p
    - charge: 0.0
    - formula: C23H48NO7P
    - annotation: !!omap
      - biggr: 1agpe180_p:0
      - chebi:
        - CHEBI:75036
        - CHEBI:83047
      - sbo: SBO:0000247
  - !!omap
    - id: fgam_c
    - name: N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide(2-)
    - compartment: c
    - charge: -2.0
    - formula: C8H13N2O9P
    - annotation: !!omap
      - biggr: fgam_c:-2
      - chebi:
        - CHEBI:147286
      - sbo: SBO:0000247
  - !!omap
    - id: pe180_p
    - name: 1,2-distearoylphosphatidylethanolamine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C41H82NO8P
    - annotation: !!omap
      - biggr: pe180_p:0
      - chebi:
        - CHEBI:47768
        - CHEBI:47764
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpg141_p
    - name: 1-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1)
    - compartment: p
    - charge: -1.0
    - formula: C20H38O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpg141_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe181_c
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1)
    - compartment: c
    - charge: 0.0
    - formula: C23H46NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe181_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: dd2coa_c
    - name: trans-dodec-2-enoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C33H52N7O17P3S
    - annotation: !!omap
      - biggr: dd2coa_c:-4
      - chebi:
        - CHEBI:57330
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sufbcd_c
    - name: SufBCD scaffold complex
    - compartment: c
    - charge: 0.0
    - formula: H8O2S6R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sufbcd_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: iasp_c
    - name: iminoaspartate
    - compartment: c
    - charge: -2.0
    - formula: C4H3NO4
    - annotation: !!omap
      - biggr: iasp_c:-2
      - chebi:
        - CHEBI:58831
      - sbo: SBO:0000247
  - !!omap
    - id: 3hpp_e
    - name: 3-hydroxypropionate
    - compartment: e
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: 3hpp_e:-1
      - chebi:
        - CHEBI:16510
      - sbo: SBO:0000247
  - !!omap
    - id: nadphx__R_c
    - name: (R)-NADPHX(4-)
    - compartment: c
    - charge: -4.0
    - formula: C21H28N7O18P3
    - annotation: !!omap
      - biggr: nadphx__R_c:-4
      - chebi:
        - CHEBI:64077
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__opmeACP_c
    - name: 3-Oxo-pimeloyl-[acyl-carrier protein] methyl ester
    - compartment: c
    - charge: -1.0
    - formula: C19H31N2O11PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__opmeACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: meoh_p
    - name: methanol
    - compartment: p
    - charge: 0.0
    - formula: CH4O
    - annotation: !!omap
      - biggr: meoh_p:0
      - chebi:
        - CHEBI:17790
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__bwco1gdp_c
    - name: Tungsten bispterin cofactor mono-guanine dinucleotide
    - compartment: c
    - charge: -4.0
    - formula: C30H32N15O20P3S4W
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__bwco1gdp_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: cit_c
    - name: citrate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H5O7
    - annotation: !!omap
      - biggr: cit_c:-3
      - chebi:
        - CHEBI:16947
      - sbo: SBO:0000247
  - !!omap
    - id: skm5p_c
    - name: 3-phosphonatoshikimate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C7H8O8P
    - annotation: !!omap
      - biggr: skm5p_c:-3
      - chebi:
        - CHEBI:145989
      - sbo: SBO:0000247
  - !!omap
    - id: oaa_c
    - name: oxaloacetate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H2O5
    - annotation: !!omap
      - biggr: oaa_c:-2
      - chebi:
        - CHEBI:16452
      - sbo: SBO:0000247
  - !!omap
    - id: td2coa_c
    - name: trans-tetradec-2-enoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C35H56N7O17P3S
    - annotation: !!omap
      - biggr: td2coa_c:-4
      - chebi:
        - CHEBI:61405
      - sbo: SBO:0000247
  - !!omap
    - id: acmet__L_c
    - name: N-acetyl-L-methionine(1-)
    - compartment: c
    - charge: -1.0
    - formula: C7H12NO3S
    - annotation: !!omap
      - biggr: acmet__L_c:-1
      - chebi:
        - CHEBI:71670
      - sbo: SBO:0000247
  - !!omap
    - id: nadhx__S_c
    - name: (S)-NADHX(2-)
    - compartment: c
    - charge: -2.0
    - formula: C21H29N7O15P2
    - annotation: !!omap
      - biggr: nadhx__S_c:-2
      - chebi:
        - CHEBI:64074
      - sbo: SBO:0000247
  - !!omap
    - id: tre6p_c
    - name: alpha,alpha-trehalose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C12H21O14P
    - annotation: !!omap
      - biggr: tre6p_c:-2
      - chebi:
        - CHEBI:58429
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhmp_c
    - name: (2R,3R)-2,3-dihydroxy-3-methylpentanoate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O4
    - annotation: !!omap
      - biggr: 23dhmp_c:-1
      - chebi:
        - CHEBI:49258
      - sbo: SBO:0000247
  - !!omap
    - id: tagur_c
    - name: D-tagaturonate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: tagur_c:-1
      - chebi:
        - CHEBI:17886
      - sbo: SBO:0000247
  - !!omap
    - id: man6p_c
    - name: alpha-D-mannose 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O9P
    - annotation: !!omap
      - biggr: man6p_c:-2
      - chebi:
        - CHEBI:60332
      - sbo: SBO:0000247
  - !!omap
    - id: acgam_e
    - name: N-acetyl-D-glucosamine
    - compartment: e
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acgam_e:0
      - chebi:
        - CHEBI:506227
      - sbo: SBO:0000247
  - !!omap
    - id: hmbil_c
    - name: preuroporphyrinogen(8-)
    - compartment: c
    - charge: -8.0
    - formula: C40H38N4O17
    - annotation: !!omap
      - biggr: hmbil_c:-8
      - chebi:
        - CHEBI:57845
      - sbo: SBO:0000247
  - !!omap
    - id: no3_e
    - name: nitrate
    - compartment: e
    - charge: -1.0
    - formula: NO3
    - annotation: !!omap
      - biggr: no3_e:-1
      - chebi:
        - CHEBI:17632
      - sbo: SBO:0000247
  - !!omap
    - id: fprica_c
    - name: 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H13N4O9P
    - annotation: !!omap
      - biggr: fprica_c:-2
      - chebi:
        - CHEBI:58467
      - sbo: SBO:0000247
  - !!omap
    - id: ara5p_c
    - name: aldehydo-D-arabinose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: ara5p_c:-2
      - chebi:
        - CHEBI:57693
      - sbo: SBO:0000247
  - !!omap
    - id: pnto__R_e
    - name: (R)-pantothenate
    - compartment: e
    - charge: -1.0
    - formula: C9H16NO5
    - annotation: !!omap
      - biggr: pnto__R_e:-1
      - chebi:
        - CHEBI:29032
      - sbo: SBO:0000247
  - !!omap
    - id: dtdprmn_c
    - name: dTDP-6-deoxy-beta-L-mannose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H24N2O15P2
    - annotation: !!omap
      - biggr: dtdprmn_c:-2
      - chebi:
        - CHEBI:57510
      - sbo: SBO:0000247
  - !!omap
    - id: mana_c
    - name: D-mannonate
    - compartment: c
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: mana_c:-1
      - chebi:
        - CHEBI:17767
      - sbo: SBO:0000247
  - !!omap
    - id: 3dhguln_c
    - name: 3-dehydro-L-gulonate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: 3dhguln_c:-1
      - chebi:
        - CHEBI:57655
      - sbo: SBO:0000247
  - !!omap
    - id: kdo_c
    - name: 3-deoxy-alpha-D-manno-oct-2-ulosonate
    - compartment: c
    - charge: -1.0
    - formula: C8H13O8
    - annotation: !!omap
      - biggr: kdo_c:-1
      - chebi:
        - CHEBI:85986
      - sbo: SBO:0000247
  - !!omap
    - id: glcn_e
    - name: D-gluconate
    - compartment: e
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: glcn_e:-1
      - chebi:
        - CHEBI:18391
      - sbo: SBO:0000247
  - !!omap
    - id: duri_e
    - name: 2'-deoxyuridine
    - compartment: e
    - charge: 0.0
    - formula: C9H12N2O5
    - annotation: !!omap
      - biggr: duri_e:0
      - chebi:
        - CHEBI:16450
      - sbo: SBO:0000247
  - !!omap
    - id: hqn_c
    - name: hydroquinone
    - compartment: c
    - charge: 0.0
    - formula: C6H6O2
    - annotation: !!omap
      - biggr: hqn_c:0
      - chebi:
        - CHEBI:17594
      - sbo: SBO:0000247
  - !!omap
    - id: lipidA_c
    - name: lipid IVA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C68H126N2O23P2
    - annotation: !!omap
      - biggr: lipidA_c:-4
      - chebi:
        - CHEBI:58603
      - sbo: SBO:0000247
  - !!omap
    - id: glucys_c
    - name: L-gamma-glutamyl-L-cysteinate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C8H13N2O5S
    - annotation: !!omap
      - biggr: glucys_c:-1
      - chebi:
        - CHEBI:58173
      - sbo: SBO:0000247
  - !!omap
    - id: 2omph_c
    - name: 2-methoxy-6-(all-trans-octaprenyl)phenol
    - compartment: c
    - charge: 0.0
    - formula: C47H72O2
    - annotation: !!omap
      - biggr: 2omph_c:0
      - chebi:
        - CHEBI:1235
      - sbo: SBO:0000247
  - !!omap
    - id: sbt6p_c
    - name: D-glucitol 6-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H13O9P
    - annotation: !!omap
      - biggr: sbt6p_c:-2
      - chebi:
        - CHEBI:60084
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__scl_c
    - name: Sirohydrochlorin
    - compartment: c
    - charge: -7.0
    - formula: C42H39N4O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__scl_c:-7
      - sbo: SBO:0000247
  - !!omap
    - id: minohp_e
    - name: myo-inositol hexakisphosphate(12-)
    - compartment: e
    - charge: -12.0
    - formula: C6H6O24P6
    - annotation: !!omap
      - biggr: minohp_e:-12
      - chebi:
        - CHEBI:58130
      - sbo: SBO:0000247
  - !!omap
    - id: pppg9_c
    - name: protoporphyrinogen(2-)
    - compartment: c
    - charge: -2.0
    - formula: C34H38N4O4
    - annotation: !!omap
      - biggr: pppg9_c:-2
      - chebi:
        - CHEBI:57307
      - sbo: SBO:0000247
  - !!omap
    - id: csn_c
    - name: cytosine
    - compartment: c
    - charge: 0.0
    - formula: C4H5N3O
    - annotation: !!omap
      - biggr: csn_c:0
      - chebi:
        - CHEBI:16040
      - sbo: SBO:0000247
  - !!omap
    - id: acnam_e
    - name: N-acetyl-beta-neuraminate
    - compartment: e
    - charge: -1.0
    - formula: C11H18NO9
    - annotation: !!omap
      - biggr: acnam_e:-1
      - chebi:
        - CHEBI:58705
      - sbo: SBO:0000247
  - !!omap
    - id: ac_p
    - name: acetate
    - compartment: p
    - charge: -1.0
    - formula: C2H3O2
    - annotation: !!omap
      - biggr: ac_p:-1
      - chebi:
        - CHEBI:30089
      - sbo: SBO:0000247
  - !!omap
    - id: ap5a_c
    - name: P(1),P(5)-bis(5'-adenosyl) pentaphosphate(5-)
    - compartment: c
    - charge: -5.0
    - formula: C20H24N10O22P5
    - annotation: !!omap
      - biggr: ap5a_c:-5
      - chebi:
        - CHEBI:62041
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malthx_p
    - name: Maltohexaose
    - compartment: p
    - charge: 0.0
    - formula: C36H62O31
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malthx_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: cgly_e
    - name: L-cysteinylglycine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C5H10N2O3S
    - annotation: !!omap
      - biggr: cgly_e:0
      - chebi:
        - CHEBI:61694
        - CHEBI:4047
      - sbo: SBO:0000247
  - !!omap
    - id: inost_c
    - name: myo-inositol
    - compartment: c
    - charge: 0.0
    - formula: C6H12O6
    - annotation: !!omap
      - biggr: inost_c:0
      - chebi:
        - CHEBI:17268
      - sbo: SBO:0000247
  - !!omap
    - id: seln_c
    - name: selanide
    - compartment: c
    - charge: -1.0
    - formula: HSe
    - annotation: !!omap
      - biggr: seln_c:-1
      - chebi:
        - CHEBI:29317
      - sbo: SBO:0000247
  - !!omap
    - id: gmhep1p_c
    - name: D-glycero-beta-D-manno-heptose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H13O10P
    - annotation: !!omap
      - biggr: gmhep1p_c:-2
      - chebi:
        - CHEBI:61593
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fecrm_un_p
    - name: Ferrichrome minus Fe(III)
    - compartment: p
    - charge: -3.0
    - formula: C27H42N9O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fecrm_un_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apoACP_c
    - name: Apoprotein [acyl carrier protein]
    - compartment: c
    - charge: 0.0
    - formula: RHO
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apoACP_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16a4colipa_p
    - name: (O16 antigen)x4 core oligosaccharide lipid A
    - compartment: p
    - charge: -11.0
    - formula: C312H523N6O200P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16a4colipa_p:-11
      - sbo: SBO:0000247
  - !!omap
    - id: ttdcea_c
    - name: myristoleate
    - compartment: c
    - charge: -1.0
    - formula: C14H25O2
    - annotation: !!omap
      - biggr: ttdcea_c:-1
      - chebi:
        - CHEBI:32370
      - sbo: SBO:0000247
  - !!omap
    - id: ump_e
    - name: uridine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H11N2O9P
    - annotation: !!omap
      - biggr: ump_e:-2
      - chebi:
        - CHEBI:57865
      - sbo: SBO:0000247
  - !!omap
    - id: ni2_e
    - name: nickel(2+)
    - compartment: e
    - charge: 2.0
    - formula: Ni
    - annotation: !!omap
      - biggr: ni2_e:2
      - chebi:
        - CHEBI:49786
      - sbo: SBO:0000247
  - !!omap
    - id: aso3_p
    - name: arsenite(3-)
    - compartment: p
    - charge: -3.0
    - formula: AsO3
    - annotation: !!omap
      - biggr: aso3_p:-3
      - chebi:
        - CHEBI:29866
      - sbo: SBO:0000247
  - !!omap
    - id: enter_p
    - name: enterobactin
    - compartment: p
    - charge: 0.0
    - formula: C30H27N3O15
    - annotation: !!omap
      - biggr: enter_p:0
      - chebi:
        - CHEBI:28855
      - sbo: SBO:0000247
  - !!omap
    - id: thrp_p
    - name: O-phosphonato-L-threonine(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H8NO6P
    - annotation: !!omap
      - biggr: thrp_p:-2
      - chebi:
        - CHEBI:58675
      - sbo: SBO:0000247
  - !!omap
    - id: cys__D_p
    - name: D-cysteine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__D_p:0
      - chebi:
        - CHEBI:35236
        - CHEBI:16375
      - sbo: SBO:0000247
  - !!omap
    - id: ch4_e
    - name: methane
    - compartment: e
    - charge: 0.0
    - formula: CH4
    - annotation: !!omap
      - biggr: ch4_e:0
      - chebi:
        - CHEBI:16183
      - sbo: SBO:0000247
  - !!omap
    - id: o2s_e
    - name: superoxide
    - compartment: e
    - charge: -1.0
    - formula: O2
    - annotation: !!omap
      - biggr: o2s_e:-1
      - chebi:
        - CHEBI:18421
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5px4px4p_p
    - name: Three disacharide linked murein units (pentapeptide crosslinked 
        tetrapeptide (A2pm->D-ala) tetrapeptide corsslinked tetrapeptide 
        (A2pm->D-ala)) (middle of chain)
    - compartment: p
    - charge: -6.0
    - formula: C114H172N22O59
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5px4px4p_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: ag_c
    - name: silver(1+)
    - compartment: c
    - charge: 1.0
    - formula: Ag
    - annotation: !!omap
      - biggr: ag_c:1
      - chebi:
        - CHEBI:49468
      - sbo: SBO:0000247
  - !!omap
    - id: 3cmp_p
    - name: 3'-CMP(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H12N3O8P
    - annotation: !!omap
      - biggr: 3cmp_p:-2
      - chebi:
        - CHEBI:60875
      - sbo: SBO:0000247
  - !!omap
    - id: 1ddecg3p_c
    - name: 1-lauroyl-sn-glycerol 3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C15H29O7P
    - annotation: !!omap
      - biggr: 1ddecg3p_c:-2
      - chebi:
        - CHEBI:72682
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg141_c
    - name: Phosphatidylglycerol (ditetradec-7-enoyl, n-C14:1)
    - compartment: c
    - charge: -1.0
    - formula: C34H62O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg141_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: crn__D_c
    - name: (S)-carnitine
    - compartment: c
    - charge: 0.0
    - formula: C7H15NO3
    - annotation: !!omap
      - biggr: crn__D_c:0
      - chebi:
        - CHEBI:11060
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa120_c
    - name: 1,2-didodecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C27H51O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa120_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe161_p
    - name: Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)
    - compartment: p
    - charge: 0.0
    - formula: C37H70N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe161_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: gthox_p
    - name: glutathione disulfide(2-)
    - compartment: p
    - charge: -2.0
    - formula: C20H30N6O12S2
    - annotation: !!omap
      - biggr: gthox_p:-2
      - chebi:
        - CHEBI:58297
      - sbo: SBO:0000247
  - !!omap
    - id: udpgal_e
    - name: UDP-alpha-D-galactose(2-)
    - compartment: e
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpgal_e:-2
      - chebi:
        - CHEBI:66914
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe161_c
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1)
    - compartment: c
    - charge: 0.0
    - formula: C21H42NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe161_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg180_p
    - name: Phosphatidylglycerol (dioctadecanoyl, n-C18:0)
    - compartment: p
    - charge: -1.0
    - formula: C42H82O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg180_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: udpacgal_p
    - name: UDP-N-acetyl-alpha-D-galactosamine(2-)
    - compartment: p
    - charge: -2.0
    - formula: C17H25N3O17P2
    - annotation: !!omap
      - biggr: udpacgal_p:-2
      - chebi:
        - CHEBI:67138
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2odec11eg3p_p
    - name: 2-octadec-11-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C21H40O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2odec11eg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__R_e
    - name: (R)-propane-1,2-diol
    - compartment: e
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__R_e:0
      - chebi:
        - CHEBI:28972
      - sbo: SBO:0000247
  - !!omap
    - id: forcoa_c
    - name: formyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C22H32N7O17P3S
    - annotation: !!omap
      - biggr: forcoa_c:-4
      - chebi:
        - CHEBI:57376
      - sbo: SBO:0000247
  - !!omap
    - id: glyc2p_e
    - name: glycerol 2-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C3H7O6P
    - annotation: !!omap
      - biggr: glyc2p_e:-2
      - chebi:
        - CHEBI:58083
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__moadcosh_c
    - name: MoaD Protein with thiocarboxylate
    - compartment: c
    - charge: 0.0
    - formula: C1H1O1S1X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__moadcosh_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 1agpe140_p
    - name: 1-myristoyl-sn-glycero-3-phosphoethanolamine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C19H40NO7P
    - annotation: !!omap
      - biggr: 1agpe140_p:0
      - chebi:
        - CHEBI:84299
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein5p3p_p
    - name: Two linked disacharide pentapeptide and tripeptide murein units 
        (uncrosslinked, middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C74H114N14O40
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein5p3p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: rephaccoa_c
    - name: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H38N7O18P3S
    - annotation: !!omap
      - biggr: rephaccoa_c:-4
      - chebi:
        - CHEBI:63458
      - sbo: SBO:0000247
  - !!omap
    - id: ttrcyc_e
    - name: tetracycline zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C22H24N2O8
    - annotation: !!omap
      - biggr: ttrcyc_e:0
      - chebi:
        - CHEBI:77932
        - CHEBI:27902
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa180_c
    - name: 1,2-dioctadecanoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C39H75O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa180_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: his__L_c
    - name: L-histidine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C6H9N3O2
    - annotation: !!omap
      - biggr: his__L_c:0
      - chebi:
        - CHEBI:57595
        - CHEBI:15971
      - sbo: SBO:0000247
  - !!omap
    - id: 2fe2s_c
    - name: di-mu-sulfido-diiron(2+)
    - compartment: c
    - charge: 2.0
    - formula: Fe2S2
    - annotation: !!omap
      - biggr: 2fe2s_c:2
      - chebi:
        - CHEBI:33737
      - sbo: SBO:0000247
  - !!omap
    - id: didp_c
    - name: 2'-deoxyinosine 5'-diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H11N4O10P2
    - annotation: !!omap
      - biggr: didp_c:-3
      - chebi:
        - CHEBI:62286
      - sbo: SBO:0000247
  - !!omap
    - id: 23doguln_p
    - name: 2,3-diketogulonate
    - compartment: p
    - charge: -1.0
    - formula: C6H7O7
    - annotation: !!omap
      - biggr: 23doguln_p:-1
      - chebi:
        - CHEBI:57441
      - sbo: SBO:0000247
  - !!omap
    - id: ribflv_c
    - name: riboflavin
    - compartment: c
    - charge: 0.0
    - formula: C17H20N4O6
    - annotation: !!omap
      - biggr: ribflv_c:0
      - chebi:
        - CHEBI:17015
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg161_p
    - name: Phosphatidylglycerol (dihexadec-9-enoyl, n-C16:1)
    - compartment: p
    - charge: -1.0
    - formula: C38H70O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg161_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: lac__L_e
    - name: (S)-lactate
    - compartment: e
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: lac__L_e:-1
      - chebi:
        - CHEBI:16651
      - sbo: SBO:0000247
  - !!omap
    - id: so4_c
    - name: sulfate
    - compartment: c
    - charge: -2.0
    - formula: O4S
    - annotation: !!omap
      - biggr: so4_c:-2
      - chebi:
        - CHEBI:16189
      - sbo: SBO:0000247
  - !!omap
    - id: 6pgl_c
    - name: 6-O-phosphonato-D-glucono-1,5-lactone(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H9O9P
    - annotation: !!omap
      - biggr: 6pgl_c:-2
      - chebi:
        - CHEBI:57955
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg141_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1)
    - compartment: p
    - charge: -1.0
    - formula: C20H38O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg141_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: ptrc_c
    - name: 1,4-butanediammonium
    - compartment: c
    - charge: 2.0
    - formula: C4H14N2
    - annotation: !!omap
      - biggr: ptrc_c:2
      - chebi:
        - CHEBI:326268
      - sbo: SBO:0000247
  - !!omap
    - id: 2dda7p_c
    - name: 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate
    - compartment: c
    - charge: -3.0
    - formula: C7H10O10P
    - annotation: !!omap
      - biggr: 2dda7p_c:-3
      - chebi:
        - CHEBI:58394
      - sbo: SBO:0000247
  - !!omap
    - id: itp_c
    - name: ITP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H11N4O14P3
    - annotation: !!omap
      - biggr: itp_c:-4
      - chebi:
        - CHEBI:61402
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1hdec9eg3p_p
    - name: 1-hexadec-9-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C19H35O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1hdec9eg3p_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 2mcit_c
    - name: 2-methylcitrate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C7H7O7
    - annotation: !!omap
      - biggr: 2mcit_c:-3
      - chebi:
        - CHEBI:15598
      - sbo: SBO:0000247
  - !!omap
    - id: sl2a6o_c
    - name: L-2-succinylamino-6-oxoheptanedioate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C11H12NO8
    - annotation: !!omap
      - biggr: sl2a6o_c:-3
      - chebi:
        - CHEBI:15685
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iscu_4fe4s_c
    - name: IscU with bound [4Fe-4S] cluster
    - compartment: c
    - charge: -2.0
    - formula: H4O2S10Fe4R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iscu_4fe4s_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: cmp_c
    - name: cytidine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H12N3O8P
    - annotation: !!omap
      - biggr: cmp_c:-2
      - chebi:
        - CHEBI:60377
      - sbo: SBO:0000247
  - !!omap
    - id: dtdpglu_c
    - name: dTDP-alpha-D-glucose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H24N2O16P2
    - annotation: !!omap
      - biggr: dtdpglu_c:-2
      - chebi:
        - CHEBI:57477
      - sbo: SBO:0000247
  - !!omap
    - id: cm_p
    - name: chloramphenicol
    - compartment: p
    - charge: 0.0
    - formula: C11H12Cl2N2O5
    - annotation: !!omap
      - biggr: cm_p:0
      - chebi:
        - CHEBI:17698
      - sbo: SBO:0000247
  - !!omap
    - id: g3pi_c
    - name: 1-(sn-glycero-3-O-phosphonato)-1D-myo-inositol
    - compartment: c
    - charge: -1.0
    - formula: C9H18O11P
    - annotation: !!omap
      - biggr: g3pi_c:-1
      - chebi:
        - CHEBI:58444
      - sbo: SBO:0000247
  - !!omap
    - id: gtp_c
    - name: GTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H12N5O14P3
    - annotation: !!omap
      - biggr: gtp_c:-4
      - chebi:
        - CHEBI:37565
      - sbo: SBO:0000247
  - !!omap
    - id: cur_c
    - name: curcumin
    - compartment: c
    - charge: 0.0
    - formula: C21H20O6
    - annotation: !!omap
      - biggr: cur_c:0
      - chebi:
        - CHEBI:3962
      - sbo: SBO:0000247
  - !!omap
    - id: uacgam_c
    - name: UDP-N-acetyl-alpha-D-glucosamine(2-)
    - compartment: c
    - charge: -2.0
    - formula: C17H25N3O17P2
    - annotation: !!omap
      - biggr: uacgam_c:-2
      - chebi:
        - CHEBI:57705
      - sbo: SBO:0000247
  - !!omap
    - id: uaccg_c
    - name: UDP-N-acetyl-3-O-(1-carboxylatovinyl)-alpha-D-glucosamine(3-)
    - compartment: c
    - charge: -3.0
    - formula: C20H26N3O19P2
    - annotation: !!omap
      - biggr: uaccg_c:-3
      - chebi:
        - CHEBI:68483
      - sbo: SBO:0000247
  - !!omap
    - id: lipidAds_c
    - name: 
        2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl-1,6-beta-D-glucosamine
        1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C68H127N2O20P
    - annotation: !!omap
      - biggr: lipidAds_c:-2
      - chebi:
        - CHEBI:58466
      - sbo: SBO:0000247
  - !!omap
    - id: h2mb4p_c
    - name: (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C5H9O8P2
    - annotation: !!omap
      - biggr: h2mb4p_c:-3
      - chebi:
        - CHEBI:128753
      - sbo: SBO:0000247
  - !!omap
    - id: galct__D_p
    - name: galactarate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C6H8O8
    - annotation: !!omap
      - biggr: galct__D_p:-2
      - chebi:
        - CHEBI:16537
      - sbo: SBO:0000247
  - !!omap
    - id: glcur_p
    - name: D-glucopyranuronate
    - compartment: p
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: glcur_p:-1
      - chebi:
        - CHEBI:58720
      - sbo: SBO:0000247
  - !!omap
    - id: prcp_c
    - name: 5-phosphonato-alpha-D-ribose cyclic-1,2-phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C5H7O10P2
    - annotation: !!omap
      - biggr: prcp_c:-3
      - chebi:
        - CHEBI:68687
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__maltpt_p
    - name: Maltopentaose
    - compartment: p
    - charge: 0.0
    - formula: C30H52O26
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__maltpt_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: fc1p_c
    - name: L-fuculose 1-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H11O8P
    - annotation: !!omap
      - biggr: fc1p_c:-2
      - chebi:
        - CHEBI:57846
      - sbo: SBO:0000247
  - !!omap
    - id: btn_c
    - name: biotinate
    - compartment: c
    - charge: -1.0
    - formula: C10H15N2O3S
    - annotation: !!omap
      - biggr: btn_c:-1
      - chebi:
        - CHEBI:57586
      - sbo: SBO:0000247
  - !!omap
    - id: so4_p
    - name: sulfate
    - compartment: p
    - charge: -2.0
    - formula: O4S
    - annotation: !!omap
      - biggr: so4_p:-2
      - chebi:
        - CHEBI:16189
      - sbo: SBO:0000247
  - !!omap
    - id: succ_c
    - name: succinate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H4O4
    - annotation: !!omap
      - biggr: succ_c:-2
      - chebi:
        - CHEBI:30031
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feoxam_un_c
    - name: Ferroxamine minus Fe(3)
    - compartment: c
    - charge: -2.0
    - formula: C25H46N6O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feoxam_un_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: cbl1_e
    - name: cob(I)alamin(1-)
    - compartment: e
    - charge: -1.0
    - formula: C62H88CoN13O14P
    - annotation: !!omap
      - biggr: cbl1_e:-1
      - chebi:
        - CHEBI:60488
      - sbo: SBO:0000247
  - !!omap
    - id: gam6p_c
    - name: alpha-D-glucosamine 6-phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: gam6p_c:-1
      - chebi:
        - CHEBI:75989
      - sbo: SBO:0000247
  - !!omap
    - id: xylu__L_c
    - name: L-xylulose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xylu__L_c:0
      - chebi:
        - CHEBI:17399
      - sbo: SBO:0000247
  - !!omap
    - id: mso3_c
    - name: methanesulfonate
    - compartment: c
    - charge: -1.0
    - formula: CH3O3S
    - annotation: !!omap
      - biggr: mso3_c:-1
      - chebi:
        - CHEBI:25224
      - sbo: SBO:0000247
  - !!omap
    - id: aps_c
    - name: 5'-adenylyl sulfate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H12N5O10PS
    - annotation: !!omap
      - biggr: aps_c:-2
      - chebi:
        - CHEBI:58243
      - sbo: SBO:0000247
  - !!omap
    - id: Sfglutth_c
    - name: S-formylglutathionate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C11H16N3O7S
    - annotation: !!omap
      - biggr: Sfglutth_c:-1
      - chebi:
        - CHEBI:57688
      - sbo: SBO:0000247
  - !!omap
    - id: xylu__L_e
    - name: L-xylulose
    - compartment: e
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xylu__L_e:0
      - chebi:
        - CHEBI:17399
      - sbo: SBO:0000247
  - !!omap
    - id: arg__L_p
    - name: L-argininium(1+)
    - compartment: p
    - charge: 1.0
    - formula: C6H15N4O2
    - annotation: !!omap
      - biggr: arg__L_p:1
      - chebi:
        - CHEBI:32682
      - sbo: SBO:0000247
  - !!omap
    - id: thdp_c
    - name: (S)-2,3,4,5-tetrahydrodipicolinate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H7NO4
    - annotation: !!omap
      - biggr: thdp_c:-2
      - chebi:
        - CHEBI:16845
      - sbo: SBO:0000247
  - !!omap
    - id: gam_p
    - name: 2-ammonio-2-deoxy-D-glucopyranose
    - compartment: p
    - charge: 1.0
    - formula: C6H14NO5
    - annotation: !!omap
      - biggr: gam_p:1
      - chebi:
        - CHEBI:58723
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe140_c
    - name: Phosphatidylethanolamine (ditetradecanoyl, n-C14:0)
    - compartment: c
    - charge: 0.0
    - formula: C33H66N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe140_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp120_c
    - name: Phosphatidylglycerophosphate (didodecanoyl, n-C12:0)
    - compartment: c
    - charge: -3.0
    - formula: C30H57O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp120_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: cdp_c
    - name: CDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H12N3O11P2
    - annotation: !!omap
      - biggr: cdp_c:-3
      - chebi:
        - CHEBI:58069
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn180_p
    - name: Cardiolipin (tetraoctadecanoyl, n-C18:0)
    - compartment: p
    - charge: -2.0
    - formula: C81H156O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn180_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: glyb_p
    - name: glycine betaine
    - compartment: p
    - charge: 0.0
    - formula: C5H11NO2
    - annotation: !!omap
      - biggr: glyb_p:0
      - chebi:
        - CHEBI:17750
      - sbo: SBO:0000247
  - !!omap
    - id: ipdp_c
    - name: isopentenyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C5H9O7P2
    - annotation: !!omap
      - biggr: ipdp_c:-3
      - chebi:
        - CHEBI:128769
      - sbo: SBO:0000247
  - !!omap
    - id: lac__L_p
    - name: (S)-lactate
    - compartment: p
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: lac__L_p:-1
      - chebi:
        - CHEBI:16651
      - sbo: SBO:0000247
  - !!omap
    - id: 2agpe180_p
    - name: 2-octadecanoyl-sn-glycero-3-phosphoethanolamine
    - compartment: p
    - charge: 0.0
    - formula: C23H48NO7P
    - annotation: !!omap
      - biggr: 2agpe180_p:0
      - chebi:
        - CHEBI:133145
        - CHEBI:133144
      - sbo: SBO:0000247
  - !!omap
    - id: ppbng_c
    - name: porphobilinogen(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H13N2O4
    - annotation: !!omap
      - biggr: ppbng_c:-1
      - chebi:
        - CHEBI:58126
      - sbo: SBO:0000247
  - !!omap
    - id: gam6p_p
    - name: alpha-D-glucosamine 6-phosphate(1-)
    - compartment: p
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: gam6p_p:-1
      - chebi:
        - CHEBI:75989
      - sbo: SBO:0000247
  - !!omap
    - id: meoh_c
    - name: methanol
    - compartment: c
    - charge: 0.0
    - formula: CH4O
    - annotation: !!omap
      - biggr: meoh_c:0
      - chebi:
        - CHEBI:17790
      - sbo: SBO:0000247
  - !!omap
    - id: pydx_e
    - name: pyridoxal
    - compartment: e
    - charge: 0.0
    - formula: C8H9NO3
    - annotation: !!omap
      - biggr: pydx_e:0
      - chebi:
        - CHEBI:17310
      - sbo: SBO:0000247
  - !!omap
    - id: metsox_R__L_c
    - name: L-methionine (R)-S-oxide
    - compartment: c
    - charge: 0.0
    - formula: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_R__L_c:0
      - chebi:
        - CHEBI:58773
        - CHEBI:49032
      - sbo: SBO:0000247
  - !!omap
    - id: pheme_c
    - name: ferroheme b(2-)
    - compartment: c
    - charge: -2.0
    - formula: C34H30FeN4O4
    - annotation: !!omap
      - biggr: pheme_c:-2
      - chebi:
        - CHEBI:60344
      - sbo: SBO:0000247
  - !!omap
    - id: hmgth_c
    - name: S-(hydroxymethyl)glutathione(1-)
    - compartment: c
    - charge: -1.0
    - formula: C11H18N3O7S
    - annotation: !!omap
      - biggr: hmgth_c:-1
      - chebi:
        - CHEBI:58758
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dcit_c
    - name: Fe(III)dicitrate
    - compartment: c
    - charge: -3.0
    - formula: C12H10FeO14
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dcit_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: gua_e
    - name: guanine
    - compartment: e
    - charge: 0.0
    - formula: C5H5N5O
    - annotation: !!omap
      - biggr: gua_e:0
      - chebi:
        - CHEBI:16235
      - sbo: SBO:0000247
  - !!omap
    - id: 4hthr_c
    - name: 4-hydroxy-L-threonine
    - compartment: c
    - charge: 0.0
    - formula: C4H9NO4
    - annotation: !!omap
      - biggr: 4hthr_c:0
      - chebi:
        - CHEBI:60904
        - CHEBI:28330
      - sbo: SBO:0000247
  - !!omap
    - id: sel_e
    - name: selenate
    - compartment: e
    - charge: -2.0
    - formula: O4Se
    - annotation: !!omap
      - biggr: sel_e:-2
      - chebi:
        - CHEBI:15075
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__S_c
    - name: (S)-propane-1,2-diol
    - compartment: c
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__S_c:0
      - chebi:
        - CHEBI:29002
      - sbo: SBO:0000247
  - !!omap
    - id: glyc__R_e
    - name: D-glycerate
    - compartment: e
    - charge: -1.0
    - formula: C3H5O4
    - annotation: !!omap
      - biggr: glyc__R_e:-1
      - chebi:
        - CHEBI:16659
      - sbo: SBO:0000247
  - !!omap
    - id: 2ohph_c
    - name: 3-(all-trans-octaprenyl)benzene-1,2-diol
    - compartment: c
    - charge: 0.0
    - formula: C46H70O2
    - annotation: !!omap
      - biggr: 2ohph_c:0
      - chebi:
        - CHEBI:1233
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__eca4colipa_e
    - name: (enterobacterial common antigen)x4 core oligosaccharide lipid A
    - compartment: e
    - charge: -15.0
    - formula: C272H447N14O160P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__eca4colipa_e:-15
      - sbo: SBO:0000247
  - !!omap
    - id: 2dglc_p
    - name: 2-deoxy-D-glucopyranose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: 2dglc_p:0
      - chebi:
        - CHEBI:84755
      - sbo: SBO:0000247
  - !!omap
    - id: sucglu_c
    - name: N-(3-carboxylatopropanoyl)-L-glutamate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H10NO7
    - annotation: !!omap
      - biggr: sucglu_c:-3
      - chebi:
        - CHEBI:58763
      - sbo: SBO:0000247
  - !!omap
    - id: no_c
    - name: nitric oxide
    - compartment: c
    - charge: 0.0
    - formula: NO
    - annotation: !!omap
      - biggr: no_c:0
      - chebi:
        - CHEBI:16480
      - sbo: SBO:0000247
  - !!omap
    - id: cyan_e
    - name: hydrogen cyanide
    - compartment: e
    - charge: 0.0
    - formula: CHN
    - annotation: !!omap
      - biggr: cyan_e:0
      - chebi:
        - CHEBI:18407
        - CHEBI:36856
      - sbo: SBO:0000247
  - !!omap
    - id: op4en_c
    - name: 2-oxopent-4-enoate
    - compartment: c
    - charge: -1.0
    - formula: C5H5O3
    - annotation: !!omap
      - biggr: op4en_c:-1
      - chebi:
        - CHEBI:11641
        - CHEBI:37319
      - sbo: SBO:0000247
  - !!omap
    - id: hom__L_p
    - name: L-homoserine
    - compartment: p
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: hom__L_p:0
      - chebi:
        - CHEBI:57476
        - CHEBI:15699
      - sbo: SBO:0000247
  - !!omap
    - id: nadph_c
    - name: NADPH(4-)
    - compartment: c
    - charge: -4.0
    - formula: C21H26N7O17P3
    - annotation: !!omap
      - biggr: nadph_c:-4
      - chebi:
        - CHEBI:57783
      - sbo: SBO:0000247
  - !!omap
    - id: dmso_c
    - name: dimethyl sulfoxide
    - compartment: c
    - charge: 0.0
    - formula: C2H6OS
    - annotation: !!omap
      - biggr: dmso_c:0
      - chebi:
        - CHEBI:28262
      - sbo: SBO:0000247
  - !!omap
    - id: acglu_c
    - name: N-acetyl-L-glutamate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H9NO5
    - annotation: !!omap
      - biggr: acglu_c:-2
      - chebi:
        - CHEBI:44337
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hddecACP_c
    - name: (R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C23H43N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hddecACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 2obut_c
    - name: 2-oxobutanoate
    - compartment: c
    - charge: -1.0
    - formula: C4H5O3
    - annotation: !!omap
      - biggr: 2obut_c:-1
      - chebi:
        - CHEBI:16763
      - sbo: SBO:0000247
  - !!omap
    - id: dtdp4d6dm_c
    - name: dTDP-4-dehydro-beta-L-rhamnose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H22N2O15P2
    - annotation: !!omap
      - biggr: dtdp4d6dm_c:-2
      - chebi:
        - CHEBI:62830
      - sbo: SBO:0000247
  - !!omap
    - id: dmpp_c
    - name: prenyl diphosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C5H9O7P2
    - annotation: !!omap
      - biggr: dmpp_c:-3
      - chebi:
        - CHEBI:57623
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cddec5eACP_c
    - name: Cis-dodec-5-enoyl-[acyl-carrier protein] (n-C12:1)
    - compartment: c
    - charge: -1.0
    - formula: C23H41N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cddec5eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: gthrd_p
    - name: glutathionate(1-)
    - compartment: p
    - charge: -1.0
    - formula: C10H16N3O6S
    - annotation: !!omap
      - biggr: gthrd_p:-1
      - chebi:
        - CHEBI:57925
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malttr_c
    - name: Maltotriose C18H32O16
    - compartment: c
    - charge: 0.0
    - formula: C18H32O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malttr_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1odec11eg3p_p
    - name: 1-octadec-11-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C21H39O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1odec11eg3p_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: rbflvrd_c
    - name: 1,5-dihydroriboflavin
    - compartment: c
    - charge: 0.0
    - formula: C17H22N4O6
    - annotation: !!omap
      - biggr: rbflvrd_c:0
      - chebi:
        - CHEBI:17607
        - CHEBI:8798
      - sbo: SBO:0000247
  - !!omap
    - id: sucarg_c
    - name: N(2)-(3-carboxylatopropionyl)-L-arginine(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H17N4O5
    - annotation: !!omap
      - biggr: sucarg_c:-1
      - chebi:
        - CHEBI:58241
      - sbo: SBO:0000247
  - !!omap
    - id: tagdp__D_c
    - name: D-tagatofuranose 1,6-bisphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C6H10O12P2
    - annotation: !!omap
      - biggr: tagdp__D_c:-4
      - chebi:
        - CHEBI:58694
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iscu_c
    - name: IscU scaffold protein
    - compartment: c
    - charge: 0.0
    - formula: H8O2S6R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iscu_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: arab__L_p
    - name: aldehydo-L-arabinose
    - compartment: p
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: arab__L_p:0
      - chebi:
        - CHEBI:6182
      - sbo: SBO:0000247
  - !!omap
    - id: cxsam_c
    - name: S-adenosyl-S-carboxymethyl-L-homocysteine dizwitterion
    - compartment: c
    - charge: 0.0
    - formula: C16H22N6O7S
    - annotation: !!omap
      - biggr: cxsam_c:0
      - chebi:
        - CHEBI:134278
      - sbo: SBO:0000247
  - !!omap
    - id: crn_c
    - name: (R)-carnitine
    - compartment: c
    - charge: 0.0
    - formula: C7H15NO3
    - annotation: !!omap
      - biggr: crn_c:0
      - chebi:
        - CHEBI:16347
      - sbo: SBO:0000247
  - !!omap
    - id: gsn_p
    - name: guanosine
    - compartment: p
    - charge: 0.0
    - formula: C10H13N5O5
    - annotation: !!omap
      - biggr: gsn_p:0
      - chebi:
        - CHEBI:16750
      - sbo: SBO:0000247
  - !!omap
    - id: dnad_c
    - name: deamido-NAD(2-)
    - compartment: c
    - charge: -2.0
    - formula: C21H24N6O15P2
    - annotation: !!omap
      - biggr: dnad_c:-2
      - chebi:
        - CHEBI:58437
      - sbo: SBO:0000247
  - !!omap
    - id: mteo2_c
    - name: methanetelluronate(1-)
    - compartment: c
    - charge: -1.0
    - formula: CH3O3Te
    - annotation: !!omap
      - biggr: mteo2_c:-1
      - chebi:
        - CHEBI:71624
      - sbo: SBO:0000247
  - !!omap
    - id: glyc_c
    - name: glycerol
    - compartment: c
    - charge: 0.0
    - formula: C3H8O3
    - annotation: !!omap
      - biggr: glyc_c:0
      - chebi:
        - CHEBI:17754
      - sbo: SBO:0000247
  - !!omap
    - id: no3_p
    - name: nitrate
    - compartment: p
    - charge: -1.0
    - formula: NO3
    - annotation: !!omap
      - biggr: no3_p:-1
      - chebi:
        - CHEBI:17632
      - sbo: SBO:0000247
  - !!omap
    - id: val__L_c
    - name: L-valine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C5H11NO2
    - annotation: !!omap
      - biggr: val__L_c:0
      - chebi:
        - CHEBI:57762
        - CHEBI:16414
      - sbo: SBO:0000247
  - !!omap
    - id: pro__L_c
    - name: L-proline
    - compartment: c
    - charge: 0.0
    - formula: C5H9NO2
    - annotation: !!omap
      - biggr: pro__L_c:0
      - chebi:
        - CHEBI:60039
        - CHEBI:17203
      - sbo: SBO:0000247
  - !!omap
    - id: ddca_p
    - name: dodecanoate
    - compartment: p
    - charge: -1.0
    - formula: C12H23O2
    - annotation: !!omap
      - biggr: ddca_p:-1
      - chebi:
        - CHEBI:18262
      - sbo: SBO:0000247
  - !!omap
    - id: ala_B_e
    - name: beta-alanine
    - compartment: e
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala_B_e:0
      - chebi:
        - CHEBI:57966
        - CHEBI:16958
      - sbo: SBO:0000247
  - !!omap
    - id: cbasp_c
    - name: N-carbamoyl-L-aspartate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H6N2O5
    - annotation: !!omap
      - biggr: cbasp_c:-2
      - chebi:
        - CHEBI:32814
      - sbo: SBO:0000247
  - !!omap
    - id: mobd_c
    - name: molybdate
    - compartment: c
    - charge: -2.0
    - formula: MoO4
    - annotation: !!omap
      - biggr: mobd_c:-2
      - chebi:
        - CHEBI:36264
      - sbo: SBO:0000247
  - !!omap
    - id: mqn8_c
    - name: menaquinone-8
    - compartment: c
    - charge: 0.0
    - formula: C51H72O2
    - annotation: !!omap
      - biggr: mqn8_c:0
      - chebi:
        - CHEBI:44027
      - sbo: SBO:0000247
  - !!omap
    - id: lac__D_p
    - name: (R)-lactate
    - compartment: p
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: lac__D_p:-1
      - chebi:
        - CHEBI:16004
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fecrm_un_e
    - name: Ferrichrome minus Fe(III)
    - compartment: e
    - charge: -3.0
    - formula: C27H42N9O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fecrm_un_e:-3
      - sbo: SBO:0000247
  - !!omap
    - id: ala__D_p
    - name: D-alanine
    - compartment: p
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: ala__D_p:0
      - chebi:
        - CHEBI:57416
        - CHEBI:15570
      - sbo: SBO:0000247
  - !!omap
    - id: fuc__L_e
    - name: alpha-L-fucose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: fuc__L_e:0
      - chebi:
        - CHEBI:42548
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malACP_c
    - name: Malonyl-[acyl-carrier protein]
    - compartment: c
    - charge: -2.0
    - formula: C14H22N2O10PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malACP_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malthp_c
    - name: Maltoheptaose
    - compartment: c
    - charge: 0.0
    - formula: C42H72O36
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malthp_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__tsul_e
    - name: Thiosulfate
    - compartment: e
    - charge: -2.0
    - formula: O3S2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__tsul_e:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__lipa_cold_c
    - name: Cold adapted KDO(2)-lipid (A)
    - compartment: c
    - charge: -6.0
    - formula: C114H202N2O39P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__lipa_cold_c:-6
      - sbo: SBO:0000247
  - !!omap
    - id: 3cmp_e
    - name: 3'-CMP(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H12N3O8P
    - annotation: !!omap
      - biggr: 3cmp_e:-2
      - chebi:
        - CHEBI:60875
      - sbo: SBO:0000247
  - !!omap
    - id: sarcs_c
    - name: sarcosine
    - compartment: c
    - charge: 0.0
    - formula: C3H7NO2
    - annotation: !!omap
      - biggr: sarcs_c:0
      - chebi:
        - CHEBI:57433
        - CHEBI:15611
      - sbo: SBO:0000247
  - !!omap
    - id: butso3_e
    - name: butane-1-sulfonate
    - compartment: e
    - charge: -1.0
    - formula: C4H9O3S
    - annotation: !!omap
      - biggr: butso3_e:-1
      - chebi:
        - CHEBI:61911
      - sbo: SBO:0000247
  - !!omap
    - id: ptrc_e
    - name: 1,4-butanediammonium
    - compartment: e
    - charge: 2.0
    - formula: C4H14N2
    - annotation: !!omap
      - biggr: ptrc_e:2
      - chebi:
        - CHEBI:326268
      - sbo: SBO:0000247
  - !!omap
    - id: acgal1p_p
    - name: N-acetyl-alpha-D-galactosamine 1-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acgal1p_p:-2
      - chebi:
        - CHEBI:61970
      - sbo: SBO:0000247
  - !!omap
    - id: hxa_e
    - name: hexanoate
    - compartment: e
    - charge: -1.0
    - formula: C6H11O2
    - annotation: !!omap
      - biggr: hxa_e:-1
      - chebi:
        - CHEBI:17120
      - sbo: SBO:0000247
  - !!omap
    - id: 3hpppn_c
    - name: 3-(3-hydroxyphenyl)propanoate
    - compartment: c
    - charge: -1.0
    - formula: C9H9O3
    - annotation: !!omap
      - biggr: 3hpppn_c:-1
      - chebi:
        - CHEBI:57277
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3hox_c
    - name: Fe(III)hydroxamate
    - compartment: c
    - charge: 0.0
    - formula: C9H18O6N3Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3hox_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: acgal1p_e
    - name: N-acetyl-alpha-D-galactosamine 1-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acgal1p_e:-2
      - chebi:
        - CHEBI:61970
      - sbo: SBO:0000247
  - !!omap
    - id: leu__L_p
    - name: L-leucine zwitterion
    - compartment: p
    - charge: 0.0
    - formula: C6H13NO2
    - annotation: !!omap
      - biggr: leu__L_p:0
      - chebi:
        - CHEBI:57427
        - CHEBI:15603
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__malthx_e
    - name: Maltohexaose
    - compartment: e
    - charge: 0.0
    - formula: C36H62O31
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__malthx_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: lyx__L_p
    - name: L-lyxopyranose
    - compartment: p
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: lyx__L_p:0
      - chebi:
        - CHEBI:62321
      - sbo: SBO:0000247
  - !!omap
    - id: 3sala_c
    - name: 3-sulfinato-L-alaninate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C3H5NO4S
    - annotation: !!omap
      - biggr: 3sala_c:-2
      - chebi:
        - CHEBI:224037
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feoxam_p
    - name: Generic ferrioxamine-Fe-III
    - compartment: p
    - charge: 1.0
    - formula: C25H46FeN6O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feoxam_p:1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hdecACP_c
    - name: (R)-3-Hydroxydecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C21H39N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hdecACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: taur_p
    - name: taurine
    - compartment: p
    - charge: 0.0
    - formula: C2H7NO3S
    - annotation: !!omap
      - biggr: taur_p:0
      - chebi:
        - CHEBI:507393
        - CHEBI:15891
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdec3eACP_c
    - name: Cis-dec-3-enoyl-[acyl-carrier protein] (n-C10:1)
    - compartment: c
    - charge: -1.0
    - formula: C21H37N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdec3eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hcmrs7eACP_c
    - name: (R)-3-hydroxy-cis-myristol-7-eoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C25H45N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hcmrs7eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: h2o2_p
    - name: hydrogen peroxide
    - compartment: p
    - charge: 0.0
    - formula: H2O2
    - annotation: !!omap
      - biggr: h2o2_p:0
      - chebi:
        - CHEBI:16240
      - sbo: SBO:0000247
  - !!omap
    - id: glu__L_p
    - name: L-glutamate(1-)
    - compartment: p
    - charge: -1.0
    - formula: C5H8NO4
    - annotation: !!omap
      - biggr: glu__L_p:-1
      - chebi:
        - CHEBI:29985
      - sbo: SBO:0000247
  - !!omap
    - id: dimp_e
    - name: 2'-deoxyinosine 5'-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H11N4O7P
    - annotation: !!omap
      - biggr: dimp_e:-2
      - chebi:
        - CHEBI:61194
      - sbo: SBO:0000247
  - !!omap
    - id: 3ump_e
    - name: 3'-UMP(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H11N2O9P
    - annotation: !!omap
      - biggr: 3ump_e:-2
      - chebi:
        - CHEBI:60784
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pe161_c
    - name: Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)
    - compartment: c
    - charge: 0.0
    - formula: C37H70N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pe161_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2odecg3p_p
    - name: 2-octadecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C21H42O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2odecg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: nac_p
    - name: nicotinate
    - compartment: p
    - charge: -1.0
    - formula: C6H4NO2
    - annotation: !!omap
      - biggr: nac_p:-1
      - chebi:
        - CHEBI:32544
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1tdecg3p_p
    - name: 1-tetradecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C17H33O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1tdecg3p_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__anhgm_p
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid
    - compartment: p
    - charge: -1.0
    - formula: C19H29N2O12
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__anhgm_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: udpLa4o_c
    - name: UDP-beta-L-threo-pentopyranos-4-ulose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C14H18N2O16P2
    - annotation: !!omap
      - biggr: udpLa4o_c:-2
      - chebi:
        - CHEBI:58710
      - sbo: SBO:0000247
  - !!omap
    - id: eths_e
    - name: ethanesulfonate
    - compartment: e
    - charge: -1.0
    - formula: C2H5O3S
    - annotation: !!omap
      - biggr: eths_e:-1
      - chebi:
        - CHEBI:61909
      - sbo: SBO:0000247
  - !!omap
    - id: psclys_e
    - name: psicosyllysine(1+)
    - compartment: e
    - charge: 1.0
    - formula: C12H25N2O7
    - annotation: !!omap
      - biggr: psclys_e:1
      - chebi:
        - CHEBI:61403
      - sbo: SBO:0000247
  - !!omap
    - id: unagamuf_p
    - name: alpha-D-FucNAc4-(1->4)-beta-D-ManNAcA-(1->4)-D-GlcNAc-undecaprenyl 
        diphosphate(3-)
    - compartment: p
    - charge: -3.0
    - formula: C79H126N3O22P2
    - annotation: !!omap
      - biggr: unagamuf_p:-3
      - chebi:
        - CHEBI:61496
      - sbo: SBO:0000247
  - !!omap
    - id: tartr__D_p
    - name: D-tartrate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C4H4O6
    - annotation: !!omap
      - biggr: tartr__D_p:-2
      - chebi:
        - CHEBI:30927
      - sbo: SBO:0000247
  - !!omap
    - id: n2o_p
    - name: dinitrogen oxide
    - compartment: p
    - charge: 0.0
    - formula: N2O
    - annotation: !!omap
      - biggr: n2o_p:0
      - chebi:
        - CHEBI:17045
      - sbo: SBO:0000247
  - !!omap
    - id: udpgal_p
    - name: UDP-alpha-D-galactose(2-)
    - compartment: p
    - charge: -2.0
    - formula: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpgal_p:-2
      - chebi:
        - CHEBI:66914
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__gfgaragund_c
    - name: 
        Galactofuranosyl-glucosyl-O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl
        diphosphate
    - compartment: c
    - charge: -2.0
    - formula: C83H135N1O27P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__gfgaragund_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3oddecACP_c
    - name: 3-Oxododecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C23H41N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3oddecACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: na15dap_c
    - name: aminopropylcadaverine(3+)
    - compartment: c
    - charge: 3.0
    - formula: C8H24N3
    - annotation: !!omap
      - biggr: na15dap_c:3
      - chebi:
        - CHEBI:64858
      - sbo: SBO:0000247
  - !!omap
    - id: quin_e
    - name: (-)-quinic acid
    - compartment: e
    - charge: 0.0
    - formula: C7H12O6
    - annotation: !!omap
      - biggr: quin_e:0
      - chebi:
        - CHEBI:17521
      - sbo: SBO:0000247
  - !!omap
    - id: glyc__R_p
    - name: D-glycerate
    - compartment: p
    - charge: -1.0
    - formula: C3H5O4
    - annotation: !!omap
      - biggr: glyc__R_p:-1
      - chebi:
        - CHEBI:16659
      - sbo: SBO:0000247
  - !!omap
    - id: 3amac_c
    - name: (Z)-3-aminoacrylate
    - compartment: c
    - charge: -1.0
    - formula: C3H4NO2
    - annotation: !!omap
      - biggr: 3amac_c:-1
      - chebi:
        - CHEBI:59894
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg181_c
    - name: Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)
    - compartment: c
    - charge: -1.0
    - formula: C42H78O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg181_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: eths_p
    - name: ethanesulfonate
    - compartment: p
    - charge: -1.0
    - formula: C2H5O3S
    - annotation: !!omap
      - biggr: eths_p:-1
      - chebi:
        - CHEBI:61909
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr141_c
    - name: 1,2-di-(7Z-tetradecenoyl)-sn-glycerol
    - compartment: c
    - charge: 0.0
    - formula: C31H56O5
    - annotation: !!omap
      - biggr: 12dgr141_c:0
      - chebi:
        - CHEBI:234284
      - sbo: SBO:0000247
  - !!omap
    - id: lipoate_c
    - name: (R)-lipoic acid
    - compartment: c
    - charge: 0.0
    - formula: C8H14O2S2
    - annotation: !!omap
      - biggr: lipoate_c:0
      - chebi:
        - CHEBI:30314
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ooctdACP_c
    - name: 3-Oxooctadecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C29H53N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ooctdACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__but2eACP_c
    - name: But-2-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C15H25N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__but2eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp161_p
    - name: Phosphatidylglycerophosphate (dihexadec-9-enoyl, n-C16:1)
    - compartment: p
    - charge: -3.0
    - formula: C38H69O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp161_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dhbzs3_c
    - name: 2-3-dihydroxybenzoylserine trimer-Fe-III
    - compartment: c
    - charge: 3.0
    - formula: C30H29FeN3O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dhbzs3_c:3
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr180_c
    - name: 1,2-dioctadecanoyl-sn-glycerol
    - compartment: c
    - charge: 0.0
    - formula: C39H76O5
    - annotation: !!omap
      - biggr: 12dgr180_c:0
      - chebi:
        - CHEBI:41847
      - sbo: SBO:0000247
  - !!omap
    - id: psuri_e
    - name: pseudouridine
    - compartment: e
    - charge: 0.0
    - formula: C9H12N2O6
    - annotation: !!omap
      - biggr: psuri_e:0
      - chebi:
        - CHEBI:17802
      - sbo: SBO:0000247
  - !!omap
    - id: ddca_c
    - name: dodecanoate
    - compartment: c
    - charge: -1.0
    - formula: C12H23O2
    - annotation: !!omap
      - biggr: ddca_c:-1
      - chebi:
        - CHEBI:18262
      - sbo: SBO:0000247
  - !!omap
    - id: pyr_c
    - name: pyruvate
    - compartment: c
    - charge: -1.0
    - formula: C3H3O3
    - annotation: !!omap
      - biggr: pyr_c:-1
      - chebi:
        - CHEBI:15361
      - sbo: SBO:0000247
  - !!omap
    - id: xdp_c
    - name: XDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H11N4O12P2
    - annotation: !!omap
      - biggr: xdp_c:-3
      - chebi:
        - CHEBI:59884
      - sbo: SBO:0000247
  - !!omap
    - id: dump_c
    - name: dUMP(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H11N2O8P
    - annotation: !!omap
      - biggr: dump_c:-2
      - chebi:
        - CHEBI:246422
      - sbo: SBO:0000247
  - !!omap
    - id: acon_c
    - name: cis-aconitate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H3O6
    - annotation: !!omap
      - biggr: acon_c:-3
      - chebi:
        - CHEBI:16383
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dsbgrd_p
    - name: Periplasmic disulfide isomerase/thiol-disulphide oxidase (reduced)
    - compartment: p
    - charge: 0.0
    - formula: XH2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dsbgrd_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhacoa_c
    - name: 2,3-didehydroadipoyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C27H37N7O19P3S
    - annotation: !!omap
      - biggr: 23dhacoa_c:-5
      - chebi:
        - CHEBI:71044
      - sbo: SBO:0000247
  - !!omap
    - id: 4mpetz_c
    - name: 4-methyl-5-(2-phosphonatooxyethyl)thiazole(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H8NO4PS
    - annotation: !!omap
      - biggr: 4mpetz_c:-2
      - chebi:
        - CHEBI:58296
      - sbo: SBO:0000247
  - !!omap
    - id: ppal_e
    - name: propanal
    - compartment: e
    - charge: 0.0
    - formula: C3H6O
    - annotation: !!omap
      - biggr: ppal_e:0
      - chebi:
        - CHEBI:17153
      - sbo: SBO:0000247
  - !!omap
    - id: ru5p__L_c
    - name: L-ribulose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O8P
    - annotation: !!omap
      - biggr: ru5p__L_c:-2
      - chebi:
        - CHEBI:58226
      - sbo: SBO:0000247
  - !!omap
    - id: sucr_e
    - name: sucrose
    - compartment: e
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: sucr_e:0
      - chebi:
        - CHEBI:17992
      - sbo: SBO:0000247
  - !!omap
    - id: 3hadpcoa_c
    - name: (3S)-hydroxyadipyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C27H39N7O20P3S
    - annotation: !!omap
      - biggr: 3hadpcoa_c:-5
      - chebi:
        - CHEBI:132183
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ocdcap_c
    - name: Octadecanoyl-phosphate (n-C18:0)
    - compartment: c
    - charge: -1.0
    - formula: C18H36O5P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ocdcap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: lac__L_c
    - name: (S)-lactate
    - compartment: c
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: lac__L_c:-1
      - chebi:
        - CHEBI:16651
      - sbo: SBO:0000247
  - !!omap
    - id: mal__D_c
    - name: (R)-malate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H4O5
    - annotation: !!omap
      - biggr: mal__D_c:-2
      - chebi:
        - CHEBI:15588
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__acolipa_e
    - name: 4-Amino-4-deoxy-L-arabinose modified core oligosaccharide lipid A
    - compartment: e
    - charge: -9.0
    - formula: C181H314N3O103P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__acolipa_e:-9
      - sbo: SBO:0000247
  - !!omap
    - id: anhm_c
    - name: 1,6-anhydro-N-acetyl-beta-muramate
    - compartment: c
    - charge: -1.0
    - formula: C11H16NO7
    - annotation: !!omap
      - biggr: anhm_c:-1
      - chebi:
        - CHEBI:58690
      - sbo: SBO:0000247
  - !!omap
    - id: urea_e
    - name: carbamimidic acid
    - compartment: e
    - charge: 0.0
    - formula: CH4N2O
    - annotation: !!omap
      - biggr: urea_e:0
      - chebi:
        - CHEBI:16199
        - CHEBI:48376
      - sbo: SBO:0000247
  - !!omap
    - id: 4fe4s_c
    - name: tetra-mu3-sulfido-tetrairon(2+)
    - compartment: c
    - charge: 2.0
    - formula: Fe4S4
    - annotation: !!omap
      - biggr: 4fe4s_c:2
      - chebi:
        - CHEBI:33722
      - sbo: SBO:0000247
  - !!omap
    - id: gcald_c
    - name: (Z)-1,2-ethenediol
    - compartment: c
    - charge: 0.0
    - formula: C2H4O2
    - annotation: !!omap
      - biggr: gcald_c:0
      - chebi:
        - CHEBI:17071
        - CHEBI:131198
      - sbo: SBO:0000247
  - !!omap
    - id: fe3_p
    - name: iron(3+)
    - compartment: p
    - charge: 3.0
    - formula: Fe
    - annotation: !!omap
      - biggr: fe3_p:3
      - chebi:
        - CHEBI:29034
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fusa_e
    - name: Fusidic acid
    - compartment: e
    - charge: 0.0
    - formula: C31H48O5
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fusa_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: tyrp_e
    - name: O(4)-phosphonatotyrosine(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H10NO6P
    - annotation: !!omap
      - biggr: tyrp_e:-2
      - chebi:
        - CHEBI:74955
      - sbo: SBO:0000247
  - !!omap
    - id: hdcea_e
    - name: palmitoleate
    - compartment: e
    - charge: -1.0
    - formula: C16H29O2
    - annotation: !!omap
      - biggr: hdcea_e:-1
      - chebi:
        - CHEBI:32372
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__gdpofuc_DUP1_c
    - name: ''
    - compartment: c
    - charge: -2.0
    - formula: C16H21N5O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__gdpofuc_DUP1_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__dhptdn_c
    - name: 6,7-Dihydropteridine
    - compartment: c
    - charge: 0.0
    - formula: C6H6N4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__dhptdn_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: galct__D_c
    - name: galactarate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C6H8O8
    - annotation: !!omap
      - biggr: galct__D_c:-2
      - chebi:
        - CHEBI:16537
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__grxox_c
    - name: Glutaredoxin (oxidized)
    - compartment: c
    - charge: 0.0
    - formula: X
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__grxox_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 4hbz_p
    - name: 4-hydroxybenzoate
    - compartment: p
    - charge: -1.0
    - formula: C7H5O3
    - annotation: !!omap
      - biggr: 4hbz_p:-1
      - chebi:
        - CHEBI:17879
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1tdec7eg3p_c
    - name: 1-tetradec-7-enoyl-sn-glycerol 3-phosphate
    - compartment: c
    - charge: -2.0
    - formula: C17H31O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1tdec7eg3p_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp180_c
    - name: Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)
    - compartment: c
    - charge: -3.0
    - formula: C42H81O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp180_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2ddecg3p_p
    - name: 2-dodecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C15H30O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2ddecg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: dha_c
    - name: dihydroxyacetone
    - compartment: c
    - charge: 0.0
    - formula: C3H6O3
    - annotation: !!omap
      - biggr: dha_c:0
      - chebi:
        - CHEBI:16016
      - sbo: SBO:0000247
  - !!omap
    - id: gthrd_e
    - name: glutathionate(1-)
    - compartment: e
    - charge: -1.0
    - formula: C10H16N3O6S
    - annotation: !!omap
      - biggr: gthrd_e:-1
      - chebi:
        - CHEBI:57925
      - sbo: SBO:0000247
  - !!omap
    - id: urdglyc_c
    - name: (-)-ureidoglycolate
    - compartment: c
    - charge: -1.0
    - formula: C3H5N2O4
    - annotation: !!omap
      - biggr: urdglyc_c:-1
      - chebi:
        - CHEBI:57296
      - sbo: SBO:0000247
  - !!omap
    - id: prpncoa_c
    - name: acryloyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C24H34N7O17P3S
    - annotation: !!omap
      - biggr: prpncoa_c:-4
      - chebi:
        - CHEBI:57367
      - sbo: SBO:0000247
  - !!omap
    - id: dcacoa_c
    - name: decanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C31H50N7O17P3S
    - annotation: !!omap
      - biggr: dcacoa_c:-4
      - chebi:
        - CHEBI:61430
      - sbo: SBO:0000247
  - !!omap
    - id: so3_e
    - name: sulfite
    - compartment: e
    - charge: -2.0
    - formula: O3S
    - annotation: !!omap
      - biggr: so3_e:-2
      - chebi:
        - CHEBI:17359
      - sbo: SBO:0000247
  - !!omap
    - id: acgam_p
    - name: N-acetyl-D-glucosamine
    - compartment: p
    - charge: 0.0
    - formula: C8H15NO6
    - annotation: !!omap
      - biggr: acgam_p:0
      - chebi:
        - CHEBI:506227
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2hdec9eg3p_p
    - name: 2-hexadec-9-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -1.0
    - formula: C19H36O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2hdec9eg3p_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: sel_c
    - name: selenate
    - compartment: c
    - charge: -2.0
    - formula: O4Se
    - annotation: !!omap
      - biggr: sel_c:-2
      - chebi:
        - CHEBI:15075
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3fe4s_c
    - name: '[3Fe-4S] damaged iron-sulfur cluster'
    - compartment: c
    - charge: 0.0
    - formula: S4Fe3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3fe4s_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__lipoamp_c
    - name: Lipoyl-AMP
    - compartment: c
    - charge: -1.0
    - formula: C18H25N5O8PS2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__lipoamp_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: icit_c
    - name: isocitrate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H5O7
    - annotation: !!omap
      - biggr: icit_c:-3
      - chebi:
        - CHEBI:16087
      - sbo: SBO:0000247
  - !!omap
    - id: 2dglc_e
    - name: 2-deoxy-D-glucopyranose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: 2dglc_e:0
      - chebi:
        - CHEBI:84755
      - sbo: SBO:0000247
  - !!omap
    - id: melib_p
    - name: melibiose
    - compartment: p
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: melib_p:0
      - chebi:
        - CHEBI:28053
      - sbo: SBO:0000247
  - !!omap
    - id: rmn_p
    - name: L-rhamnopyranose
    - compartment: p
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: rmn_p:0
      - chebi:
        - CHEBI:62346
      - sbo: SBO:0000247
  - !!omap
    - id: galctn__D_p
    - name: D-galactonate
    - compartment: p
    - charge: -1.0
    - formula: C6H11O7
    - annotation: !!omap
      - biggr: galctn__D_p:-1
      - chebi:
        - CHEBI:12931
      - sbo: SBO:0000247
  - !!omap
    - id: lac__D_c
    - name: (R)-lactate
    - compartment: c
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: lac__D_c:-1
      - chebi:
        - CHEBI:16004
      - sbo: SBO:0000247
  - !!omap
    - id: frulys_e
    - name: fructosyllysine(1+)
    - compartment: e
    - charge: 1.0
    - formula: C12H25N2O7
    - annotation: !!omap
      - biggr: frulys_e:1
      - chebi:
        - CHEBI:61393
      - sbo: SBO:0000247
  - !!omap
    - id: nadh_c
    - name: NADH(2-)
    - compartment: c
    - charge: -2.0
    - formula: C21H27N7O14P2
    - annotation: !!omap
      - biggr: nadh_c:-2
      - chebi:
        - CHEBI:57945
      - sbo: SBO:0000247
  - !!omap
    - id: 2dr5p_c
    - name: 2-deoxy-D-ribofuranose 5-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H9O7P
    - annotation: !!omap
      - biggr: 2dr5p_c:-2
      - chebi:
        - CHEBI:62877
      - sbo: SBO:0000247
  - !!omap
    - id: amp_c
    - name: adenosine 5'-monophosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: amp_c:-2
      - chebi:
        - CHEBI:456215
      - sbo: SBO:0000247
  - !!omap
    - id: cmp_e
    - name: cytidine 5'-monophosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C9H12N3O8P
    - annotation: !!omap
      - biggr: cmp_e:-2
      - chebi:
        - CHEBI:60377
      - sbo: SBO:0000247
  - !!omap
    - id: pydam_e
    - name: pyridoxaminium(1+)
    - compartment: e
    - charge: 1.0
    - formula: C8H13N2O2
    - annotation: !!omap
      - biggr: pydam_e:1
      - chebi:
        - CHEBI:57761
      - sbo: SBO:0000247
  - !!omap
    - id: 3php_c
    - name: 3-phosphonatooxypyruvate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C3H2O7P
    - annotation: !!omap
      - biggr: 3php_c:-3
      - chebi:
        - CHEBI:18110
      - sbo: SBO:0000247
  - !!omap
    - id: dtdp_c
    - name: dTDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C10H13N2O11P2
    - annotation: !!omap
      - biggr: dtdp_c:-3
      - chebi:
        - CHEBI:58369
      - sbo: SBO:0000247
  - !!omap
    - id: dhf_c
    - name: dihydrofolate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C19H19N7O6
    - annotation: !!omap
      - biggr: dhf_c:-2
      - chebi:
        - CHEBI:57451
      - sbo: SBO:0000247
  - !!omap
    - id: gmp_p
    - name: guanosine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H12N5O8P
    - annotation: !!omap
      - biggr: gmp_p:-2
      - chebi:
        - CHEBI:58115
      - sbo: SBO:0000247
  - !!omap
    - id: 56dura_c
    - name: 5,6-dihydrouracil
    - compartment: c
    - charge: 0.0
    - formula: C4H6N2O2
    - annotation: !!omap
      - biggr: 56dura_c:0
      - chebi:
        - CHEBI:15901
      - sbo: SBO:0000247
  - !!omap
    - id: 4hoxpacd_p
    - name: (4-hydroxyphenyl)acetaldehyde
    - compartment: p
    - charge: 0.0
    - formula: C8H8O2
    - annotation: !!omap
      - biggr: 4hoxpacd_p:0
      - chebi:
        - CHEBI:15621
      - sbo: SBO:0000247
  - !!omap
    - id: for_c
    - name: formate
    - compartment: c
    - charge: -1.0
    - formula: CHO2
    - annotation: !!omap
      - biggr: for_c:-1
      - chebi:
        - CHEBI:15740
      - sbo: SBO:0000247
  - !!omap
    - id: urate_c
    - name: 7H-purine-2,6,8-triol
    - compartment: c
    - charge: 0.0
    - formula: C5H4N4O3
    - annotation: !!omap
      - biggr: urate_c:0
      - chebi:
        - CHEBI:17775
        - CHEBI:46811
        - CHEBI:46817
        - CHEBI:46814
        - CHEBI:46823
        - CHEBI:49051
      - sbo: SBO:0000247
  - !!omap
    - id: pi_e
    - name: hydrogenphosphate
    - compartment: e
    - charge: -2.0
    - formula: HO4P
    - annotation: !!omap
      - biggr: pi_e:-2
      - chebi:
        - CHEBI:43474
      - sbo: SBO:0000247
  - !!omap
    - id: 3amp_e
    - name: 3'-AMP(2-)
    - compartment: e
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: 3amp_e:-2
      - chebi:
        - CHEBI:60880
      - sbo: SBO:0000247
  - !!omap
    - id: h2_c
    - name: dihydrogen
    - compartment: c
    - charge: 0.0
    - formula: H2
    - annotation: !!omap
      - biggr: h2_c:0
      - chebi:
        - CHEBI:18276
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__14glucan_e
    - name: 1,4-alpha-D-glucan
    - compartment: e
    - charge: 0.0
    - formula: C36H62O31
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__14glucan_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: thmmp_c
    - name: thiamine(1+) monophosphate(2-)
    - compartment: c
    - charge: -1.0
    - formula: C12H16N4O4PS
    - annotation: !!omap
      - biggr: thmmp_c:-1
      - chebi:
        - CHEBI:37575
      - sbo: SBO:0000247
  - !!omap
    - id: psd5p_c
    - name: pseudouridine 5'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H11N2O9P
    - annotation: !!omap
      - biggr: psd5p_c:-2
      - chebi:
        - CHEBI:58380
      - sbo: SBO:0000247
  - !!omap
    - id: b2coa_c
    - name: crotonoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C25H36N7O17P3S
    - annotation: !!omap
      - biggr: b2coa_c:-4
      - chebi:
        - CHEBI:57332
      - sbo: SBO:0000247
  - !!omap
    - id: fe3_e
    - name: iron(3+)
    - compartment: e
    - charge: 3.0
    - formula: Fe
    - annotation: !!omap
      - biggr: fe3_e:3
      - chebi:
        - CHEBI:29034
      - sbo: SBO:0000247
  - !!omap
    - id: asp__L_e
    - name: L-aspartate(1-)
    - compartment: e
    - charge: -1.0
    - formula: C4H6NO4
    - annotation: !!omap
      - biggr: asp__L_e:-1
      - chebi:
        - CHEBI:29991
      - sbo: SBO:0000247
  - !!omap
    - id: athr__L_c
    - name: L-allothreonine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: athr__L_c:0
      - chebi:
        - CHEBI:58585
        - CHEBI:28718
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3opalmACP_c
    - name: 3-Oxohexadecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C27H49N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3opalmACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hcvac11eACP_c
    - name: (R)-3-hydroxy-cis-vacc-11-enoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C29H53N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hcvac11eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: sq_p
    - name: 6-sulfo-alpha-D-quinovose(1-)
    - compartment: p
    - charge: -1.0
    - formula: C6H11O8S
    - annotation: !!omap
      - biggr: sq_p:-1
      - chebi:
        - CHEBI:142956
      - sbo: SBO:0000247
  - !!omap
    - id: thr__L_e
    - name: L-threonine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C4H9NO3
    - annotation: !!omap
      - biggr: thr__L_e:0
      - chebi:
        - CHEBI:57926
        - CHEBI:16857
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__maltpt_e
    - name: Maltopentaose
    - compartment: e
    - charge: 0.0
    - formula: C30H52O26
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__maltpt_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: metsox_S__L_e
    - name: L-methionine (S)-S-oxide
    - compartment: e
    - charge: 0.0
    - formula: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_S__L_e:0
      - chebi:
        - CHEBI:58772
        - CHEBI:49031
      - sbo: SBO:0000247
  - !!omap
    - id: acampnt_c
    - name: (acetamidomethyl)phosphonate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C3H7NO4P
    - annotation: !!omap
      - biggr: acampnt_c:-1
      - chebi:
        - CHEBI:134093
      - sbo: SBO:0000247
  - !!omap
    - id: coa_c
    - name: coenzyme A(4-)
    - compartment: c
    - charge: -4.0
    - formula: C21H32N7O16P3S
    - annotation: !!omap
      - biggr: coa_c:-4
      - chebi:
        - CHEBI:57287
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__kdo2lipid4L_c
    - name: KDO(2)-lipid IV(A) with laurate
    - compartment: c
    - charge: -6.0
    - formula: C96H170N2O38P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__kdo2lipid4L_c:-6
      - sbo: SBO:0000247
  - !!omap
    - id: asn__L_c
    - name: L-asparagine
    - compartment: c
    - charge: 0.0
    - formula: C4H8N2O3
    - annotation: !!omap
      - biggr: asn__L_c:0
      - chebi:
        - CHEBI:58048
        - CHEBI:17196
      - sbo: SBO:0000247
  - !!omap
    - id: nac_c
    - name: nicotinate
    - compartment: c
    - charge: -1.0
    - formula: C6H4NO2
    - annotation: !!omap
      - biggr: nac_c:-1
      - chebi:
        - CHEBI:32544
      - sbo: SBO:0000247
  - !!omap
    - id: 4per_c
    - name: 4-O-phosphonato-D-erythronate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C4H6O8P
    - annotation: !!omap
      - biggr: 4per_c:-3
      - chebi:
        - CHEBI:58766
      - sbo: SBO:0000247
  - !!omap
    - id: no2_c
    - name: nitrite
    - compartment: c
    - charge: -1.0
    - formula: NO2
    - annotation: !!omap
      - biggr: no2_c:-1
      - chebi:
        - CHEBI:16301
      - sbo: SBO:0000247
  - !!omap
    - id: 15dap_e
    - name: cadaverine(2+)
    - compartment: e
    - charge: 2.0
    - formula: C5H16N2
    - annotation: !!omap
      - biggr: 15dap_e:2
      - chebi:
        - CHEBI:58384
      - sbo: SBO:0000247
  - !!omap
    - id: udp_c
    - name: UDP(3-)
    - compartment: c
    - charge: -3.0
    - formula: C9H11N2O12P2
    - annotation: !!omap
      - biggr: udp_c:-3
      - chebi:
        - CHEBI:58223
      - sbo: SBO:0000247
  - !!omap
    - id: hdd2coa_c
    - name: (E)-hexadec-2-enoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C37H60N7O17P3S
    - annotation: !!omap
      - biggr: hdd2coa_c:-4
      - chebi:
        - CHEBI:61526
      - sbo: SBO:0000247
  - !!omap
    - id: hxan_c
    - name: hypoxanthine
    - compartment: c
    - charge: 0.0
    - formula: C5H4N4O
    - annotation: !!omap
      - biggr: hxan_c:0
      - chebi:
        - CHEBI:17368
      - sbo: SBO:0000247
  - !!omap
    - id: 2dh3dgal6p_c
    - name: 6-phosphonato-2-dehydro-3-deoxy-D-galactate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H8O9P
    - annotation: !!omap
      - biggr: 2dh3dgal6p_c:-3
      - chebi:
        - CHEBI:58298
      - sbo: SBO:0000247
  - !!omap
    - id: no_e
    - name: nitric oxide
    - compartment: e
    - charge: 0.0
    - formula: NO
    - annotation: !!omap
      - biggr: no_e:0
      - chebi:
        - CHEBI:16480
      - sbo: SBO:0000247
  - !!omap
    - id: ap4a_c
    - name: P(1),P(4)-bis(5'-adenosyl) tetraphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C20H24N10O19P4
    - annotation: !!omap
      - biggr: ap4a_c:-4
      - chebi:
        - CHEBI:58141
      - sbo: SBO:0000247
  - !!omap
    - id: leu__L_c
    - name: L-leucine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C6H13NO2
    - annotation: !!omap
      - biggr: leu__L_c:0
      - chebi:
        - CHEBI:57427
        - CHEBI:15603
      - sbo: SBO:0000247
  - !!omap
    - id: 25aics_c
    - name: SAICAR(4-)
    - compartment: c
    - charge: -4.0
    - formula: C13H15N4O12P
    - annotation: !!omap
      - biggr: 25aics_c:-4
      - chebi:
        - CHEBI:58443
      - sbo: SBO:0000247
  - !!omap
    - id: meoh_e
    - name: methanol
    - compartment: e
    - charge: 0.0
    - formula: CH4O
    - annotation: !!omap
      - biggr: meoh_e:0
      - chebi:
        - CHEBI:17790
      - sbo: SBO:0000247
  - !!omap
    - id: melib_e
    - name: melibiose
    - compartment: e
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: melib_e:0
      - chebi:
        - CHEBI:28053
      - sbo: SBO:0000247
  - !!omap
    - id: 35cgmp_c
    - name: 3',5'-cyclic GMP(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H11N5O7P
    - annotation: !!omap
      - biggr: 35cgmp_c:-1
      - chebi:
        - CHEBI:57746
      - sbo: SBO:0000247
  - !!omap
    - id: 2ddglcn_p
    - name: 2-dehydro-3-deoxy-D-gluconate
    - compartment: p
    - charge: -1.0
    - formula: C6H9O6
    - annotation: !!omap
      - biggr: 2ddglcn_p:-1
      - chebi:
        - CHEBI:57990
      - sbo: SBO:0000247
  - !!omap
    - id: adocbip_c
    - name: adenosylcobinamide phosphate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C58H83CoN16O14P
    - annotation: !!omap
      - biggr: adocbip_c:-1
      - chebi:
        - CHEBI:58502
      - sbo: SBO:0000247
  - !!omap
    - id: etha_e
    - name: ethanolaminium(1+)
    - compartment: e
    - charge: 1.0
    - formula: C2H8NO
    - annotation: !!omap
      - biggr: etha_e:1
      - chebi:
        - CHEBI:57603
      - sbo: SBO:0000247
  - !!omap
    - id: gdpfuc_c
    - name: GDP-beta-L-fucose(2-)
    - compartment: c
    - charge: -2.0
    - formula: C16H23N5O15P2
    - annotation: !!omap
      - biggr: gdpfuc_c:-2
      - chebi:
        - CHEBI:57273
      - sbo: SBO:0000247
  - !!omap
    - id: glyc3p_p
    - name: sn-glycerol 3-phosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C3H7O6P
    - annotation: !!omap
      - biggr: glyc3p_p:-2
      - chebi:
        - CHEBI:57597
      - sbo: SBO:0000247
  - !!omap
    - id: unaga_c
    - name: 
        N-acetyl-alpha-D-glucosaminyl-1-diphospho-ditrans,polycis-undecaprenol(2-)
    - compartment: c
    - charge: -2.0
    - formula: C63H103NO12P2
    - annotation: !!omap
      - biggr: unaga_c:-2
      - chebi:
        - CHEBI:62959
      - sbo: SBO:0000247
  - !!omap
    - id: k_p
    - name: potassium(1+)
    - compartment: p
    - charge: 1.0
    - formula: K
    - annotation: !!omap
      - biggr: k_p:1
      - chebi:
        - CHEBI:29103
      - sbo: SBO:0000247
  - !!omap
    - id: gtp_p
    - name: GTP(4-)
    - compartment: p
    - charge: -4.0
    - formula: C10H12N5O14P3
    - annotation: !!omap
      - biggr: gtp_p:-4
      - chebi:
        - CHEBI:37565
      - sbo: SBO:0000247
  - !!omap
    - id: xylu__L_p
    - name: L-xylulose
    - compartment: p
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xylu__L_p:0
      - chebi:
        - CHEBI:17399
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__maltttr_e
    - name: Maltotetraose
    - compartment: e
    - charge: 0.0
    - formula: C24H42O21
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__maltttr_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: glcur_e
    - name: D-glucopyranuronate
    - compartment: e
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: glcur_e:-1
      - chebi:
        - CHEBI:58720
      - sbo: SBO:0000247
  - !!omap
    - id: metsox_S__L_c
    - name: L-methionine (S)-S-oxide
    - compartment: c
    - charge: 0.0
    - formula: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_S__L_c:0
      - chebi:
        - CHEBI:58772
        - CHEBI:49031
      - sbo: SBO:0000247
  - !!omap
    - id: crncoa_c
    - name: (R)-carnitinyl-CoA(3-)
    - compartment: c
    - charge: -3.0
    - formula: C28H46N8O18P3S
    - annotation: !!omap
      - biggr: crncoa_c:-3
      - chebi:
        - CHEBI:60932
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3hox_e
    - name: Fe(III)hydroxamate
    - compartment: e
    - charge: 0.0
    - formula: C9H18O6N3Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3hox_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: 3ump_p
    - name: 3'-UMP(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H11N2O9P
    - annotation: !!omap
      - biggr: 3ump_p:-2
      - chebi:
        - CHEBI:60784
      - sbo: SBO:0000247
  - !!omap
    - id: g3ps_p
    - name: sn-glycero-3-phosphoserine(1-)
    - compartment: p
    - charge: -1.0
    - formula: C6H13NO8P
    - annotation: !!omap
      - biggr: g3ps_p:-1
      - chebi:
        - CHEBI:64765
      - sbo: SBO:0000247
  - !!omap
    - id: ggbutal_c
    - name: gamma-glutamyl-gamma-aminobutyraldehyde
    - compartment: c
    - charge: 0.0
    - formula: C9H16N2O4
    - annotation: !!omap
      - biggr: ggbutal_c:0
      - chebi:
        - CHEBI:61508
        - CHEBI:61521
      - sbo: SBO:0000247
  - !!omap
    - id: gbbtn_e
    - name: 4-(trimethylammonio)butanoate
    - compartment: e
    - charge: 0.0
    - formula: C7H15NO2
    - annotation: !!omap
      - biggr: gbbtn_e:0
      - chebi:
        - CHEBI:16244
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pg140_c
    - name: Phosphatidylglycerol (ditetradecanoyl, n-C14:0)
    - compartment: c
    - charge: -1.0
    - formula: C34H66O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pg140_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 4abz_c
    - name: 4-aminobenzoate
    - compartment: c
    - charge: -1.0
    - formula: C7H6NO2
    - annotation: !!omap
      - biggr: 4abz_c:-1
      - chebi:
        - CHEBI:17836
      - sbo: SBO:0000247
  - !!omap
    - id: mso3_p
    - name: methanesulfonate
    - compartment: p
    - charge: -1.0
    - formula: CH3O3S
    - annotation: !!omap
      - biggr: mso3_p:-1
      - chebi:
        - CHEBI:25224
      - sbo: SBO:0000247
  - !!omap
    - id: pa140_p
    - name: 1,2-dimyrsitoylphosphatidate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C31H59O8P
    - annotation: !!omap
      - biggr: pa140_p:-2
      - chebi:
        - CHEBI:83321
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__LalaDgluMdap_c
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate
    - compartment: c
    - charge: -1.0
    - formula: C15H25N4O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LalaDgluMdap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cbl1_p
    - name: cob(I)alamin(1-)
    - compartment: p
    - charge: -1.0
    - formula: C62H88CoN13O14P
    - annotation: !!omap
      - biggr: cbl1_p:-1
      - chebi:
        - CHEBI:60488
      - sbo: SBO:0000247
  - !!omap
    - id: enter_e
    - name: enterobactin
    - compartment: e
    - charge: 0.0
    - formula: C30H27N3O15
    - annotation: !!omap
      - biggr: enter_e:0
      - chebi:
        - CHEBI:28855
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__apg180_c
    - name: Acyl phosphatidylglycerol (n-C18:0)
    - compartment: c
    - charge: -1.0
    - formula: C60H116O11P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__apg180_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__colipa_c
    - name: Core oligosaccharide lipid A
    - compartment: c
    - charge: -11.0
    - formula: C176H303N2O100P4
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__colipa_c:-11
      - sbo: SBO:0000247
  - !!omap
    - id: LalaLglu_c
    - name: L-alanyl-L-glutamate(1-)
    - compartment: c
    - charge: -1.0
    - formula: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaLglu_c:-1
      - chebi:
        - CHEBI:61396
      - sbo: SBO:0000247
  - !!omap
    - id: appl_c
    - name: (2R)-2-hydroxypropylammonium
    - compartment: c
    - charge: 1.0
    - formula: C3H10NO
    - annotation: !!omap
      - biggr: appl_c:1
      - chebi:
        - CHEBI:42677
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__aragund_c
    - name: O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate
    - compartment: c
    - charge: -2.0
    - formula: C71H115N1O17P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__aragund_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 2dglc_c
    - name: 2-deoxy-D-glucopyranose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: 2dglc_c:0
      - chebi:
        - CHEBI:84755
      - sbo: SBO:0000247
  - !!omap
    - id: 14dhncoa_c
    - name: 1,4-dihydroxy-2-naphthoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C32H38N7O19P3S
    - annotation: !!omap
      - biggr: 14dhncoa_c:-4
      - chebi:
        - CHEBI:58897
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3omrsACP_c
    - name: 3-Oxotetradecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C25H45N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3omrsACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__o16a2und_p
    - name: (O16 antigen)x2 undecaprenyl diphosphate
    - compartment: p
    - charge: -2.0
    - formula: C123H200N2O57P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__o16a2und_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: mmet_c
    - name: S-methyl-L-methionine
    - compartment: c
    - charge: 1.0
    - formula: C6H14NO2S
    - annotation: !!omap
      - biggr: mmet_c:1
      - chebi:
        - CHEBI:58252
        - CHEBI:17728
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp181_c
    - name: Phosphatidylglycerophosphate (dioctadec-11-enoyl, n-C18:1)
    - compartment: c
    - charge: -3.0
    - formula: C42H77O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp181_c:-3
      - sbo: SBO:0000247
  - !!omap
    - id: acald_c
    - name: acetaldehyde
    - compartment: c
    - charge: 0.0
    - formula: C2H4O
    - annotation: !!omap
      - biggr: acald_c:0
      - chebi:
        - CHEBI:15343
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpe180_c
    - name: Cyclopropane phosphatidylethanolamine (dioctadec-11,12-cyclo-anoyl, 
        n-C18:0 cyclo)
    - compartment: c
    - charge: 0.0
    - formula: C43H82N1O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpe180_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: acgam1p_e
    - name: N-acetyl-alpha-D-glucosamine 1-phosphate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C8H14NO9P
    - annotation: !!omap
      - biggr: acgam1p_e:-2
      - chebi:
        - CHEBI:57776
      - sbo: SBO:0000247
  - !!omap
    - id: 5aprbu_c
    - name: 5-amino-6-(5-phosphoribitylamino)uracil(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H15N4O9P
    - annotation: !!omap
      - biggr: 5aprbu_c:-2
      - chebi:
        - CHEBI:58421
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa141_p
    - name: 1,2-ditetradec-7-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C31H55O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa141_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 5aop_c
    - name: 5-aminolevulinic acid
    - compartment: c
    - charge: 0.0
    - formula: C5H9NO3
    - annotation: !!omap
      - biggr: 5aop_c:0
      - chebi:
        - CHEBI:356416
        - CHEBI:17549
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr141_p
    - name: 1,2-di-(7Z-tetradecenoyl)-sn-glycerol
    - compartment: p
    - charge: 0.0
    - formula: C31H56O5
    - annotation: !!omap
      - biggr: 12dgr141_p:0
      - chebi:
        - CHEBI:234284
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa180_p
    - name: 1,2-dioctadecanoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C39H75O8P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa180_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: oc2coa_c
    - name: trans-oct-2-enoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C29H44N7O17P3S
    - annotation: !!omap
      - biggr: oc2coa_c:-4
      - chebi:
        - CHEBI:62242
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe141_c
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1)
    - compartment: c
    - charge: 0.0
    - formula: C19H38NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe141_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: rdmbzi_c
    - name: alpha-ribazole
    - compartment: c
    - charge: 0.0
    - formula: C14H18N2O4
    - annotation: !!omap
      - biggr: rdmbzi_c:0
      - chebi:
        - CHEBI:10329
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpe141_p
    - name: 1-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1)
    - compartment: p
    - charge: 0.0
    - formula: C19H38NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpe141_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: ctbtcoa_c
    - name: (E)-4-(trimethylammonio)but-2-enoyl-CoA(3-)
    - compartment: c
    - charge: -3.0
    - formula: C28H44N8O17P3S
    - annotation: !!omap
      - biggr: ctbtcoa_c:-3
      - chebi:
        - CHEBI:60933
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpg161_p
    - name: 1-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1)
    - compartment: p
    - charge: -1.0
    - formula: C22H42O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpg161_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3hmrsACP_c
    - name: (R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C25H47N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3hmrsACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: LalaDglu_e
    - name: L-alanyl-D-glutamate(1-)
    - compartment: e
    - charge: -1.0
    - formula: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaDglu_e:-1
      - chebi:
        - CHEBI:61395
      - sbo: SBO:0000247
  - !!omap
    - id: pram_c
    - name: 5-phospho-beta-D-ribosylaminium(1-)
    - compartment: c
    - charge: -1.0
    - formula: C5H11NO7P
    - annotation: !!omap
      - biggr: pram_c:-1
      - chebi:
        - CHEBI:58681
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sufbcd_2fe2s2_c
    - name: SufBCD with two bound [2Fe-2S] clusters
    - compartment: c
    - charge: -4.0
    - formula: O2S10Fe4R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sufbcd_2fe2s2_c:-4
      - sbo: SBO:0000247
  - !!omap
    - id: urate_e
    - name: 7H-purine-2,6,8-triol
    - compartment: e
    - charge: 0.0
    - formula: C5H4N4O3
    - annotation: !!omap
      - biggr: urate_e:0
      - chebi:
        - CHEBI:17775
        - CHEBI:46811
        - CHEBI:46817
        - CHEBI:46814
        - CHEBI:46823
        - CHEBI:49051
      - sbo: SBO:0000247
  - !!omap
    - id: oxur_c
    - name: oxalurate
    - compartment: c
    - charge: -1.0
    - formula: C3H3N2O4
    - annotation: !!omap
      - biggr: oxur_c:-1
      - chebi:
        - CHEBI:57824
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ocdceap_c
    - name: Octadecanoyl-phosphate (n-C18:1)
    - compartment: c
    - charge: -1.0
    - formula: C18H34O5P
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ocdceap_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: cm_e
    - name: chloramphenicol
    - compartment: e
    - charge: 0.0
    - formula: C11H12Cl2N2O5
    - annotation: !!omap
      - biggr: cm_e:0
      - chebi:
        - CHEBI:17698
      - sbo: SBO:0000247
  - !!omap
    - id: agm_e
    - name: agmatinium(2+)
    - compartment: e
    - charge: 2.0
    - formula: C5H16N4
    - annotation: !!omap
      - biggr: agm_e:2
      - chebi:
        - CHEBI:58145
      - sbo: SBO:0000247
  - !!omap
    - id: cdg_c
    - name: 7-carboxylato-7-deazaguanine
    - compartment: c
    - charge: -1.0
    - formula: C7H5N4O3
    - annotation: !!omap
      - biggr: cdg_c:-1
      - chebi:
        - CHEBI:61036
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feenter_c
    - name: Fe-enterobactin
    - compartment: c
    - charge: 3.0
    - formula: C30H27FeN3O15
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feenter_c:3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__iscs_c
    - name: IscS sulfur acceptor protein
    - compartment: c
    - charge: 0.0
    - formula: HSR
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__iscs_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dhbzs3_p
    - name: 2-3-dihydroxybenzoylserine trimer-Fe-III
    - compartment: p
    - charge: 3.0
    - formula: C30H29FeN3O16
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dhbzs3_p:3
      - sbo: SBO:0000247
  - !!omap
    - id: na1_c
    - name: sodium(1+)
    - compartment: c
    - charge: 1.0
    - formula: Na
    - annotation: !!omap
      - biggr: na1_c:1
      - chebi:
        - CHEBI:29101
      - sbo: SBO:0000247
  - !!omap
    - id: 3c4mop_c
    - name: (2S)-2-isopropyl-3-oxosuccinate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H8O5
    - annotation: !!omap
      - biggr: 3c4mop_c:-2
      - chebi:
        - CHEBI:17214
      - sbo: SBO:0000247
  - !!omap
    - id: dxylnt_c
    - name: D-xylonate
    - compartment: c
    - charge: -1.0
    - formula: C5H9O6
    - annotation: !!omap
      - biggr: dxylnt_c:-1
      - chebi:
        - CHEBI:17746
      - sbo: SBO:0000247
  - !!omap
    - id: lys__L_p
    - name: L-lysinium(1+)
    - compartment: p
    - charge: 1.0
    - formula: C6H15N2O2
    - annotation: !!omap
      - biggr: lys__L_p:1
      - chebi:
        - CHEBI:32551
      - sbo: SBO:0000247
  - !!omap
    - id: urdgci_c
    - name: (S)-2-ureidoglycine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C3H7N3O3
    - annotation: !!omap
      - biggr: urdgci_c:0
      - chebi:
        - CHEBI:59947
        - CHEBI:59945
      - sbo: SBO:0000247
  - !!omap
    - id: hcys__L_c
    - name: L-homocysteine zwitterion
    - compartment: c
    - charge: 0.0
    - formula: C4H9NO2S
    - annotation: !!omap
      - biggr: hcys__L_c:0
      - chebi:
        - CHEBI:58199
        - CHEBI:17588
      - sbo: SBO:0000247
  - !!omap
    - id: no3_c
    - name: nitrate
    - compartment: c
    - charge: -1.0
    - formula: NO3
    - annotation: !!omap
      - biggr: no3_c:-1
      - chebi:
        - CHEBI:17632
      - sbo: SBO:0000247
  - !!omap
    - id: mal__L_e
    - name: (S)-malate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H4O5
    - annotation: !!omap
      - biggr: mal__L_e:-2
      - chebi:
        - CHEBI:15589
      - sbo: SBO:0000247
  - !!omap
    - id: co2_c
    - name: carbon dioxide
    - compartment: c
    - charge: 0.0
    - formula: CO2
    - annotation: !!omap
      - biggr: co2_c:0
      - chebi:
        - CHEBI:16526
      - sbo: SBO:0000247
  - !!omap
    - id: 4ppcys_c
    - name: N-[(R)-4-phosphonatopantothenoyl]-L-cysteinate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C12H20N2O9PS
    - annotation: !!omap
      - biggr: 4ppcys_c:-3
      - chebi:
        - CHEBI:59458
      - sbo: SBO:0000247
  - !!omap
    - id: phe__L_e
    - name: L-phenylalanine zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C9H11NO2
    - annotation: !!omap
      - biggr: phe__L_e:0
      - chebi:
        - CHEBI:58095
        - CHEBI:17295
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpgn_e
    - name: Coprogen
    - compartment: e
    - charge: -1.0
    - formula: C35H52N6O13Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpgn_e:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pi_p
    - name: hydrogenphosphate
    - compartment: p
    - charge: -2.0
    - formula: HO4P
    - annotation: !!omap
      - biggr: pi_p:-2
      - chebi:
        - CHEBI:43474
      - sbo: SBO:0000247
  - !!omap
    - id: alltt_c
    - name: allantoate
    - compartment: c
    - charge: -1.0
    - formula: C4H7N4O4
    - annotation: !!omap
      - biggr: alltt_c:-1
      - chebi:
        - CHEBI:17536
      - sbo: SBO:0000247
  - !!omap
    - id: fum_e
    - name: fumarate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C4H2O4
    - annotation: !!omap
      - biggr: fum_e:-2
      - chebi:
        - CHEBI:29806
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpgn_p
    - name: Coprogen
    - compartment: p
    - charge: -1.0
    - formula: C35H52N6O13Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpgn_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: acald_e
    - name: acetaldehyde
    - compartment: e
    - charge: 0.0
    - formula: C2H4O
    - annotation: !!omap
      - biggr: acald_e:0
      - chebi:
        - CHEBI:15343
      - sbo: SBO:0000247
  - !!omap
    - id: h2_p
    - name: dihydrogen
    - compartment: p
    - charge: 0.0
    - formula: H2
    - annotation: !!omap
      - biggr: h2_p:0
      - chebi:
        - CHEBI:18276
      - sbo: SBO:0000247
  - !!omap
    - id: tym_p
    - name: tyraminium
    - compartment: p
    - charge: 1.0
    - formula: C8H12NO
    - annotation: !!omap
      - biggr: tym_p:1
      - chebi:
        - CHEBI:327995
      - sbo: SBO:0000247
  - !!omap
    - id: etoh_p
    - name: ethanol
    - compartment: p
    - charge: 0.0
    - formula: C2H6O
    - annotation: !!omap
      - biggr: etoh_p:0
      - chebi:
        - CHEBI:16236
      - sbo: SBO:0000247
  - !!omap
    - id: 25drapp_c
    - name: 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C9H14N5O8P
    - annotation: !!omap
      - biggr: 25drapp_c:-2
      - chebi:
        - CHEBI:58614
        - CHEBI:59545
      - sbo: SBO:0000247
  - !!omap
    - id: gthox_c
    - name: glutathione disulfide(2-)
    - compartment: c
    - charge: -2.0
    - formula: C20H30N6O12S2
    - annotation: !!omap
      - biggr: gthox_c:-2
      - chebi:
        - CHEBI:58297
      - sbo: SBO:0000247
  - !!omap
    - id: peamn_e
    - name: 2-phenylethanaminium
    - compartment: e
    - charge: 1.0
    - formula: C8H12N
    - annotation: !!omap
      - biggr: peamn_e:1
      - chebi:
        - CHEBI:225237
      - sbo: SBO:0000247
  - !!omap
    - id: gar_c
    - name: N(1)-(5-phospho-beta-D-ribosyl)glycinamide(1-)
    - compartment: c
    - charge: -1.0
    - formula: C7H14N2O8P
    - annotation: !!omap
      - biggr: gar_c:-1
      - chebi:
        - CHEBI:143788
      - sbo: SBO:0000247
  - !!omap
    - id: tungs_c
    - name: tungstate
    - compartment: c
    - charge: -2.0
    - formula: O4W
    - annotation: !!omap
      - biggr: tungs_c:-2
      - chebi:
        - CHEBI:46502
      - sbo: SBO:0000247
  - !!omap
    - id: 23ccmp_p
    - name: 2',3'-cyclic CMP(1-)
    - compartment: p
    - charge: -1.0
    - formula: C9H11N3O7P
    - annotation: !!omap
      - biggr: 23ccmp_p:-1
      - chebi:
        - CHEBI:60877
      - sbo: SBO:0000247
  - !!omap
    - id: arbtn_c
    - name: aerobactinate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C22H33N4O13
    - annotation: !!omap
      - biggr: arbtn_c:-3
      - chebi:
        - CHEBI:58396
      - sbo: SBO:0000247
  - !!omap
    - id: enter_c
    - name: enterobactin
    - compartment: c
    - charge: 0.0
    - formula: C30H27N3O15
    - annotation: !!omap
      - biggr: enter_c:0
      - chebi:
        - CHEBI:28855
      - sbo: SBO:0000247
  - !!omap
    - id: cu_p
    - name: copper(1+)
    - compartment: p
    - charge: 1.0
    - formula: Cu
    - annotation: !!omap
      - biggr: cu_p:1
      - chebi:
        - CHEBI:49552
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3hox_p
    - name: Fe(III)hydroxamate
    - compartment: p
    - charge: 0.0
    - formula: C9H18O6N3Fe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3hox_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__feoxam_un_e
    - name: Ferroxamine minus Fe(3)
    - compartment: e
    - charge: -2.0
    - formula: C25H46N6O8
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__feoxam_un_e:-2
      - sbo: SBO:0000247
  - !!omap
    - id: udpacgal_e
    - name: UDP-N-acetyl-alpha-D-galactosamine(2-)
    - compartment: e
    - charge: -2.0
    - formula: C17H25N3O17P2
    - annotation: !!omap
      - biggr: udpacgal_e:-2
      - chebi:
        - CHEBI:67138
      - sbo: SBO:0000247
  - !!omap
    - id: ump_p
    - name: uridine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H11N2O9P
    - annotation: !!omap
      - biggr: ump_p:-2
      - chebi:
        - CHEBI:57865
      - sbo: SBO:0000247
  - !!omap
    - id: lald__D_c
    - name: (R)-lactaldehyde
    - compartment: c
    - charge: 0.0
    - formula: C3H6O2
    - annotation: !!omap
      - biggr: lald__D_c:0
      - chebi:
        - CHEBI:17167
      - sbo: SBO:0000247
  - !!omap
    - id: cmp_p
    - name: cytidine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C9H12N3O8P
    - annotation: !!omap
      - biggr: cmp_p:-2
      - chebi:
        - CHEBI:60377
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3hox_un_e
    - name: Fe(III)hydoxamate, unloaded
    - compartment: e
    - charge: -3.0
    - formula: C9H18O6N3
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3hox_un_e:-3
      - sbo: SBO:0000247
  - !!omap
    - id: acetol_c
    - name: hydroxyacetone
    - compartment: c
    - charge: 0.0
    - formula: C3H6O2
    - annotation: !!omap
      - biggr: acetol_c:0
      - chebi:
        - CHEBI:27957
      - sbo: SBO:0000247
  - !!omap
    - id: pydxn_e
    - name: pyridoxine
    - compartment: e
    - charge: 0.0
    - formula: C8H11NO3
    - annotation: !!omap
      - biggr: pydxn_e:0
      - chebi:
        - CHEBI:16709
      - sbo: SBO:0000247
  - !!omap
    - id: 23cgmp_e
    - name: 2',3'-cyclic GMP(1-)
    - compartment: e
    - charge: -1.0
    - formula: C10H11N5O7P
    - annotation: !!omap
      - biggr: 23cgmp_e:-1
      - chebi:
        - CHEBI:60837
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein4px4px4p_p
    - name: Three disacharide linked murein units (tetrapeptide crosslinked 
        tetrapeptide (A2pm->D-ala) & tetrapeptide corsslinked tetrapeptide 
        (A2pm->D-ala)) (middle of chain)
    - compartment: p
    - charge: -6.0
    - formula: C111H167N21O58
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein4px4px4p_p:-6
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhbzs_c
    - name: N-(2,3-dihydroxybenzoyl)-L-serinate
    - compartment: c
    - charge: -1.0
    - formula: C10H10NO6
    - annotation: !!omap
      - biggr: 23dhbzs_c:-1
      - chebi:
        - CHEBI:58154
      - sbo: SBO:0000247
  - !!omap
    - id: tym_e
    - name: tyraminium
    - compartment: e
    - charge: 1.0
    - formula: C8H12NO
    - annotation: !!omap
      - biggr: tym_e:1
      - chebi:
        - CHEBI:327995
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3haACP_c
    - name: (3R)-3-Hydroxyacyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C15H27N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3haACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ooctACP_c
    - name: 3-Oxooctanoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C19H33N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ooctACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: pser_e
    - name: O-phosphonato-L-serine(2-)
    - compartment: e
    - charge: -2.0
    - formula: C3H6NO6P
    - annotation: !!omap
      - biggr: pser_e:-2
      - chebi:
        - CHEBI:57524
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__3ocmrs7eACP_c
    - name: 3-oxo-cis-myristol-7-eoyl-[acyl-carrier protein]
    - compartment: c
    - charge: -1.0
    - formula: C25H43N2O9PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3ocmrs7eACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: so2_c
    - name: sulfur dioxide
    - compartment: c
    - charge: 0.0
    - formula: O2S
    - annotation: !!omap
      - biggr: so2_c:0
      - chebi:
        - CHEBI:18422
      - sbo: SBO:0000247
  - !!omap
    - id: 1odecg3p_c
    - name: 1-stearoyl-sn-glycero-3-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C21H41O7P
    - annotation: !!omap
      - biggr: 1odecg3p_c:-2
      - chebi:
        - CHEBI:74565
      - sbo: SBO:0000247
  - !!omap
    - id: poaac_c
    - name: (Z)-3-aminoperacrylic acid
    - compartment: c
    - charge: 0.0
    - formula: C3H5NO3
    - annotation: !!omap
      - biggr: poaac_c:0
      - chebi:
        - CHEBI:59892
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpe120_p
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C12:0)
    - compartment: p
    - charge: 0.0
    - formula: C17H36NO7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpe120_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: cdpdhdecg_c
    - name: CDP-dipalmitoyl-sn-glycerol(2-)
    - compartment: c
    - charge: -2.0
    - formula: C44H79N3O15P2
    - annotation: !!omap
      - biggr: cdpdhdecg_c:-2
      - chebi:
        - CHEBI:77190
      - sbo: SBO:0000247
  - !!omap
    - id: 5mtr_e
    - name: S-methyl-5-thio-D-ribofuranose
    - compartment: e
    - charge: 0.0
    - formula: C6H12O4S
    - annotation: !!omap
      - biggr: 5mtr_e:0
      - chebi:
        - CHEBI:78440
      - sbo: SBO:0000247
  - !!omap
    - id: hdcea_p
    - name: palmitoleate
    - compartment: p
    - charge: -1.0
    - formula: C16H29O2
    - annotation: !!omap
      - biggr: hdcea_p:-1
      - chebi:
        - CHEBI:32372
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg160_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0)
    - compartment: p
    - charge: -1.0
    - formula: C22H44O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg160_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: 2agpe180_c
    - name: 2-octadecanoyl-sn-glycero-3-phosphoethanolamine
    - compartment: c
    - charge: 0.0
    - formula: C23H48NO7P
    - annotation: !!omap
      - biggr: 2agpe180_c:0
      - chebi:
        - CHEBI:133145
        - CHEBI:133144
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__2agpg161_p
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1)
    - compartment: p
    - charge: -1.0
    - formula: C22H42O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2agpg161_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__moco_c
    - name: Molybdenum cofactor
    - compartment: c
    - charge: -2.0
    - formula: C10H10N5O8PS2Mo
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__moco_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1tdec7eg3p_p
    - name: 1-tetradec-7-enoyl-sn-glycerol 3-phosphate
    - compartment: p
    - charge: -2.0
    - formula: C17H31O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1tdec7eg3p_p:-2
      - sbo: SBO:0000247
  - !!omap
    - id: 3hpp_c
    - name: 3-hydroxypropionate
    - compartment: c
    - charge: -1.0
    - formula: C3H5O3
    - annotation: !!omap
      - biggr: 3hpp_c:-1
      - chebi:
        - CHEBI:16510
      - sbo: SBO:0000247
  - !!omap
    - id: 2ddg6p_c
    - name: 2-dehydro-3-deoxy-6-phosphonato-D-gluconate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C6H8O9P
    - annotation: !!omap
      - biggr: 2ddg6p_c:-3
      - chebi:
        - CHEBI:57569
      - sbo: SBO:0000247
  - !!omap
    - id: mincyc_e
    - name: minocycline zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C23H27N3O7
    - annotation: !!omap
      - biggr: mincyc_e:0
      - chebi:
        - CHEBI:77906
        - CHEBI:50694
      - sbo: SBO:0000247
  - !!omap
    - id: 1tdecg3p_p
    - name: 1-tetradecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol)(1-)
    - compartment: p
    - charge: -1.0
    - formula: C20H40O9P
    - annotation: !!omap
      - biggr: 1tdecg3p_p:-1
      - chebi:
        - CHEBI:72826
      - sbo: SBO:0000247
  - !!omap
    - id: arab__L_c
    - name: aldehydo-L-arabinose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: arab__L_c:0
      - chebi:
        - CHEBI:6182
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sufbcd_4fe4s_c
    - name: SufBCD with bound [4Fe-4S] cluster
    - compartment: c
    - charge: -2.0
    - formula: H4O2S10Fe4R
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sufbcd_4fe4s_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: dhcur_c
    - name: dihydrocurcumin
    - compartment: c
    - charge: 0.0
    - formula: C21H22O6
    - annotation: !!omap
      - biggr: dhcur_c:0
      - chebi:
        - CHEBI:67262
      - sbo: SBO:0000247
  - !!omap
    - id: ade_c
    - name: adenine
    - compartment: c
    - charge: 0.0
    - formula: C5H5N5
    - annotation: !!omap
      - biggr: ade_c:0
      - chebi:
        - CHEBI:16708
      - sbo: SBO:0000247
  - !!omap
    - id: rml_c
    - name: L-rhamnulose
    - compartment: c
    - charge: 0.0
    - formula: C6H12O5
    - annotation: !!omap
      - biggr: rml_c:0
      - chebi:
        - CHEBI:17897
      - sbo: SBO:0000247
  - !!omap
    - id: rfamp_e
    - name: rifampicin
    - compartment: e
    - charge: 0.0
    - formula: C43H58N4O12
    - annotation: !!omap
      - biggr: rfamp_e:0
      - chebi:
        - CHEBI:71365
        - CHEBI:28077
      - sbo: SBO:0000247
  - !!omap
    - id: acg5p_c
    - name: N-acetyl-L-gamma-glutamyl phosphate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C7H9NO8P
    - annotation: !!omap
      - biggr: acg5p_c:-3
      - chebi:
        - CHEBI:57936
      - sbo: SBO:0000247
  - !!omap
    - id: rfamp_p
    - name: rifampicin
    - compartment: p
    - charge: 0.0
    - formula: C43H58N4O12
    - annotation: !!omap
      - biggr: rfamp_p:0
      - chebi:
        - CHEBI:71365
        - CHEBI:28077
      - sbo: SBO:0000247
  - !!omap
    - id: 4pasp_c
    - name: 4-phosphonato-L-aspartic acid(2-)
    - compartment: c
    - charge: -2.0
    - formula: C4H6NO7P
    - annotation: !!omap
      - biggr: 4pasp_c:-2
      - chebi:
        - CHEBI:57535
      - sbo: SBO:0000247
  - !!omap
    - id: glu5p_c
    - name: L-gamma-glutamyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C5H8NO7P
    - annotation: !!omap
      - biggr: glu5p_c:-2
      - chebi:
        - CHEBI:58274
      - sbo: SBO:0000247
  - !!omap
    - id: h2o_e
    - name: water
    - compartment: e
    - charge: 0.0
    - formula: H2O
    - annotation: !!omap
      - biggr: h2o_e:0
      - chebi:
        - CHEBI:15377
      - sbo: SBO:0000247
  - !!omap
    - id: ch4_c
    - name: methane
    - compartment: c
    - charge: 0.0
    - formula: CH4
    - annotation: !!omap
      - biggr: ch4_c:0
      - chebi:
        - CHEBI:16183
      - sbo: SBO:0000247
  - !!omap
    - id: 23dhdp_c
    - name: (S)-2,3-dihydrodipicolinate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C7H5NO4
    - annotation: !!omap
      - biggr: 23dhdp_c:-2
      - chebi:
        - CHEBI:30620
      - sbo: SBO:0000247
  - !!omap
    - id: 3mop_c
    - name: (S)-3-methyl-2-oxovalerate
    - compartment: c
    - charge: -1.0
    - formula: C6H9O3
    - annotation: !!omap
      - biggr: 3mop_c:-1
      - chebi:
        - CHEBI:35146
      - sbo: SBO:0000247
  - !!omap
    - id: 3htdcoa_c
    - name: (S)-3-hydroxytetradecanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C35H58N7O18P3S
    - annotation: !!omap
      - biggr: 3htdcoa_c:-4
      - chebi:
        - CHEBI:62614
      - sbo: SBO:0000247
  - !!omap
    - id: dgtp_c
    - name: dGTP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C10H12N5O13P3
    - annotation: !!omap
      - biggr: dgtp_c:-4
      - chebi:
        - CHEBI:61429
      - sbo: SBO:0000247
  - !!omap
    - id: rib__D_e
    - name: D-ribofuranose
    - compartment: e
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: rib__D_e:0
      - chebi:
        - CHEBI:47013
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fad_c
    - name: Flavin adenine dinucleotide oxidized
    - compartment: c
    - charge: -2.0
    - formula: C27H31N9O15P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fad_c:-2
      - sbo: SBO:0000247
  - !!omap
    - id: uri_e
    - name: uridine
    - compartment: e
    - charge: 0.0
    - formula: C9H12N2O6
    - annotation: !!omap
      - biggr: uri_e:0
      - chebi:
        - CHEBI:16704
      - sbo: SBO:0000247
  - !!omap
    - id: 4ahmmp_c
    - name: 4-amino-5-hydroxymethyl-2-methylpyrimidine
    - compartment: c
    - charge: 0.0
    - formula: C6H9N3O
    - annotation: !!omap
      - biggr: 4ahmmp_c:0
      - chebi:
        - CHEBI:16892
      - sbo: SBO:0000247
  - !!omap
    - id: trp__L_e
    - name: L-tryptophan zwitterion
    - compartment: e
    - charge: 0.0
    - formula: C11H12N2O2
    - annotation: !!omap
      - biggr: trp__L_e:0
      - chebi:
        - CHEBI:57912
        - CHEBI:16828
      - sbo: SBO:0000247
  - !!omap
    - id: dpcoa_c
    - name: 3'-dephospho-CoA(2-)
    - compartment: c
    - charge: -2.0
    - formula: C21H33N7O13P2S
    - annotation: !!omap
      - biggr: dpcoa_c:-2
      - chebi:
        - CHEBI:57328
      - sbo: SBO:0000247
  - !!omap
    - id: 2ommbl_c
    - name: 5-methoxy-2-methyl-3-octaprenylhydroquinone
    - compartment: c
    - charge: 0.0
    - formula: C48H74O3
    - annotation: !!omap
      - biggr: 2ommbl_c:0
      - chebi:
        - CHEBI:60656
      - sbo: SBO:0000247
  - !!omap
    - id: 23ddhb_c
    - name: 2,3-dihydroxy-2,3-dihydrobenzoate
    - compartment: c
    - charge: -1.0
    - formula: C7H7O4
    - annotation: !!omap
      - biggr: 23ddhb_c:-1
      - chebi:
        - CHEBI:57576
      - sbo: SBO:0000247
  - !!omap
    - id: din_e
    - name: 2'-deoxyinosine
    - compartment: e
    - charge: 0.0
    - formula: C10H12N4O4
    - annotation: !!omap
      - biggr: din_e:0
      - chebi:
        - CHEBI:28997
      - sbo: SBO:0000247
  - !!omap
    - id: 36dahx_c
    - name: (3S)-3,6-diammoniohexanoate
    - compartment: c
    - charge: 1.0
    - formula: C6H15N2O2
    - annotation: !!omap
      - biggr: 36dahx_c:1
      - chebi:
        - CHEBI:57434
      - sbo: SBO:0000247
  - !!omap
    - id: melib_c
    - name: melibiose
    - compartment: c
    - charge: 0.0
    - formula: C12H22O11
    - annotation: !!omap
      - biggr: melib_c:0
      - chebi:
        - CHEBI:28053
      - sbo: SBO:0000247
  - !!omap
    - id: udcpp_c
    - name: ditrans,polycis-undecaprenyl phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C55H89O4P
    - annotation: !!omap
      - biggr: udcpp_c:-2
      - chebi:
        - CHEBI:60392
      - sbo: SBO:0000247
  - !!omap
    - id: dcamp_c
    - name: N(6)-(1,2-dicarboxylatoethyl)-AMP(4-)
    - compartment: c
    - charge: -4.0
    - formula: C14H14N5O11P
    - annotation: !!omap
      - biggr: dcamp_c:-4
      - chebi:
        - CHEBI:57567
      - sbo: SBO:0000247
  - !!omap
    - id: kdo2lipid4_c
    - name: (KDO)2-lipid IVA(6-)
    - compartment: c
    - charge: -6.0
    - formula: C84H148N2O37P2
    - annotation: !!omap
      - biggr: kdo2lipid4_c:-6
      - chebi:
        - CHEBI:60365
      - sbo: SBO:0000247
  - !!omap
    - id: galct__D_e
    - name: galactarate(2-)
    - compartment: e
    - charge: -2.0
    - formula: C6H8O8
    - annotation: !!omap
      - biggr: galct__D_e:-2
      - chebi:
        - CHEBI:16537
      - sbo: SBO:0000247
  - !!omap
    - id: udpglcur_c
    - name: UDP-alpha-D-glucuronate(3-)
    - compartment: c
    - charge: -3.0
    - formula: C15H19N2O18P2
    - annotation: !!omap
      - biggr: udpglcur_c:-3
      - chebi:
        - CHEBI:58052
      - sbo: SBO:0000247
  - !!omap
    - id: 4h2opntn_c
    - name: (S)-4-hydroxy-2-oxopentanoate
    - compartment: c
    - charge: -1.0
    - formula: C5H7O4
    - annotation: !!omap
      - biggr: 4h2opntn_c:-1
      - chebi:
        - CHEBI:73143
      - sbo: SBO:0000247
  - !!omap
    - id: btnso_c
    - name: biotinate sulfoxide(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H15N2O4S
    - annotation: !!omap
      - biggr: btnso_c:-1
      - chebi:
        - CHEBI:62046
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__myrsACP_c
    - name: Myristoyl-ACP (n-C14:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C25H47N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__myrsACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__selnp_c
    - name: Selenophosphate
    - compartment: c
    - charge: -1.0
    - formula: H2O3PSe
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__selnp_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: camp_c
    - name: 3',5'-cyclic AMP(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H11N5O6P
    - annotation: !!omap
      - biggr: camp_c:-1
      - chebi:
        - CHEBI:58165
      - sbo: SBO:0000247
  - !!omap
    - id: dtbt_c
    - name: (4R,5S)-dethiobiotin(1-)
    - compartment: c
    - charge: -1.0
    - formula: C10H17N2O3
    - annotation: !!omap
      - biggr: dtbt_c:-1
      - chebi:
        - CHEBI:149473
      - sbo: SBO:0000247
  - !!omap
    - id: galur_e
    - name: aldehydo-D-galacturonate
    - compartment: e
    - charge: -1.0
    - formula: C6H9O7
    - annotation: !!omap
      - biggr: galur_e:-1
      - chebi:
        - CHEBI:12952
      - sbo: SBO:0000247
  - !!omap
    - id: gmhep17bp_c
    - name: D-glycero-beta-D-manno-heptose 1,7-bisphosphate(4-)
    - compartment: c
    - charge: -4.0
    - formula: C7H12O13P2
    - annotation: !!omap
      - biggr: gmhep17bp_c:-4
      - chebi:
        - CHEBI:60208
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ACP_c
    - name: Acyl carrier protein
    - compartment: c
    - charge: -1.0
    - formula: C11H21N2O7PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__met__D_p
    - name: D-Methionine
    - compartment: p
    - charge: 0.0
    - formula: C5H10NO2S
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__met__D_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__palmACP_c
    - name: Palmitoyl-ACP (n-C16:0ACP)
    - compartment: c
    - charge: -1.0
    - formula: C27H51N2O8PRS
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__palmACP_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: alltn_p
    - name: 1-(5-hydroxy-2-oxo-2,3-dihydroimidazol-4-yl)urea
    - compartment: p
    - charge: 0.0
    - formula: C4H6N4O3
    - annotation: !!omap
      - biggr: alltn_p:0
      - chebi:
        - CHEBI:15676
        - CHEBI:74345
      - sbo: SBO:0000247
  - !!omap
    - id: dad_2_p
    - name: 2'-deoxyadenosine
    - compartment: p
    - charge: 0.0
    - formula: C10H13N5O3
    - annotation: !!omap
      - biggr: dad_2_p:0
      - chebi:
        - CHEBI:17256
      - sbo: SBO:0000247
  - !!omap
    - id: suc6p_c
    - name: sucrose 6(F)-phosphate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C12H21O14P
    - annotation: !!omap
      - biggr: suc6p_c:-2
      - chebi:
        - CHEBI:57723
      - sbo: SBO:0000247
  - !!omap
    - id: etha_p
    - name: ethanolaminium(1+)
    - compartment: p
    - charge: 1.0
    - formula: C2H8NO
    - annotation: !!omap
      - biggr: etha_p:1
      - chebi:
        - CHEBI:57603
      - sbo: SBO:0000247
  - !!omap
    - id: dgmp_p
    - name: 2'-deoxyguanosine 5'-monophosphate(2-)
    - compartment: p
    - charge: -2.0
    - formula: C10H12N5O7P
    - annotation: !!omap
      - biggr: dgmp_p:-2
      - chebi:
        - CHEBI:57673
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__23dappa_p
    - name: 2,3-diaminopropionate
    - compartment: p
    - charge: 1.0
    - formula: C3H9N2O2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__23dappa_p:1
      - sbo: SBO:0000247
  - !!omap
    - id: g3pi_p
    - name: 1-(sn-glycero-3-O-phosphonato)-1D-myo-inositol
    - compartment: p
    - charge: -1.0
    - formula: C9H18O11P
    - annotation: !!omap
      - biggr: g3pi_p:-1
      - chebi:
        - CHEBI:58444
      - sbo: SBO:0000247
  - !!omap
    - id: 23camp_e
    - name: 2',3'-cyclic AMP(1-)
    - compartment: e
    - charge: -1.0
    - formula: C10H11N5O6P
    - annotation: !!omap
      - biggr: 23camp_e:-1
      - chebi:
        - CHEBI:60879
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__uLa4n_p
    - name: Undecaprenyl phosphate-4-amino-4-deoxy-L-arabinose
    - compartment: p
    - charge: 0.0
    - formula: C60H100N1O7P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__uLa4n_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: cu_c
    - name: copper(1+)
    - compartment: c
    - charge: 1.0
    - formula: Cu
    - annotation: !!omap
      - biggr: cu_c:1
      - chebi:
        - CHEBI:49552
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cpgn_un_p
    - name: Coprogen unloaded (no Fe(III))
    - compartment: p
    - charge: -4.0
    - formula: C35H52N6O13
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cpgn_un_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ps141_c
    - name: Phosphatidylserine (ditetradec-7-enoyl, n-C14:1)
    - compartment: c
    - charge: -1.0
    - formula: C34H61N1O10P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ps141_c:-1
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp141_p
    - name: Phosphatidylglycerophosphate (ditetradec-7-enoyl, n-C14:1)
    - compartment: p
    - charge: -3.0
    - formula: C34H61O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp141_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pgp180_p
    - name: Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)
    - compartment: p
    - charge: -3.0
    - formula: C42H81O13P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pgp180_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: psclys_p
    - name: psicosyllysine(1+)
    - compartment: p
    - charge: 1.0
    - formula: C12H25N2O7
    - annotation: !!omap
      - biggr: psclys_p:1
      - chebi:
        - CHEBI:61403
      - sbo: SBO:0000247
  - !!omap
    - id: 4abzglu_c
    - name: N-(4-aminobenzoyl)-L-glutamate
    - compartment: c
    - charge: -2.0
    - formula: C12H12N2O5
    - annotation: !!omap
      - biggr: 4abzglu_c:-2
      - chebi:
        - CHEBI:60903
      - sbo: SBO:0000247
  - !!omap
    - id: dhps_e
    - name: 3-sulfopropanediol(1-)
    - compartment: e
    - charge: -1.0
    - formula: C3H7O5S
    - annotation: !!omap
      - biggr: dhps_e:-1
      - chebi:
        - CHEBI:77138
      - sbo: SBO:0000247
  - !!omap
    - id: erthrs_c
    - name: D-erythrose
    - compartment: c
    - charge: 0.0
    - formula: C4H8O4
    - annotation: !!omap
      - biggr: erthrs_c:0
      - chebi:
        - CHEBI:27904
      - sbo: SBO:0000247
  - !!omap
    - id: succoa_c
    - name: succinyl-CoA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C25H35N7O19P3S
    - annotation: !!omap
      - biggr: succoa_c:-5
      - chebi:
        - CHEBI:57292
      - sbo: SBO:0000247
  - !!omap
    - id: xyl__D_c
    - name: D-xylopyranose
    - compartment: c
    - charge: 0.0
    - formula: C5H10O5
    - annotation: !!omap
      - biggr: xyl__D_c:0
      - chebi:
        - CHEBI:53455
      - sbo: SBO:0000247
  - !!omap
    - id: sucsal_c
    - name: 4-oxobutanoate
    - compartment: c
    - charge: -1.0
    - formula: C4H5O3
    - annotation: !!omap
      - biggr: sucsal_c:-1
      - chebi:
        - CHEBI:57706
      - sbo: SBO:0000247
  - !!omap
    - id: alltn_c
    - name: 1-(5-hydroxy-2-oxo-2,3-dihydroimidazol-4-yl)urea
    - compartment: c
    - charge: 0.0
    - formula: C4H6N4O3
    - annotation: !!omap
      - biggr: alltn_c:0
      - chebi:
        - CHEBI:15676
        - CHEBI:74345
      - sbo: SBO:0000247
  - !!omap
    - id: 3hdcoa_c
    - name: (S)-3-hydroxydecanoyl-CoA(4-)
    - compartment: c
    - charge: -4.0
    - formula: C31H50N7O18P3S
    - annotation: !!omap
      - biggr: 3hdcoa_c:-4
      - chebi:
        - CHEBI:62616
      - sbo: SBO:0000247
  - !!omap
    - id: mnl_e
    - name: D-mannitol
    - compartment: e
    - charge: 0.0
    - formula: C6H14O6
    - annotation: !!omap
      - biggr: mnl_e:0
      - chebi:
        - CHEBI:16899
      - sbo: SBO:0000247
  - !!omap
    - id: for_e
    - name: formate
    - compartment: e
    - charge: -1.0
    - formula: CHO2
    - annotation: !!omap
      - biggr: for_e:-1
      - chebi:
        - CHEBI:15740
      - sbo: SBO:0000247
  - !!omap
    - id: kdolipid4_c
    - name: (KDO)-lipid IVA(5-)
    - compartment: c
    - charge: -5.0
    - formula: C76H137N2O30P2
    - annotation: !!omap
      - biggr: kdolipid4_c:-5
      - chebi:
        - CHEBI:60364
      - sbo: SBO:0000247
  - !!omap
    - id: seramp_c
    - name: L-seryl-AMP
    - compartment: c
    - charge: 0.0
    - formula: C13H19N6O9P
    - annotation: !!omap
      - biggr: seramp_c:0
      - chebi:
        - CHEBI:61645
      - sbo: SBO:0000247
  - !!omap
    - id: ade_p
    - name: adenine
    - compartment: p
    - charge: 0.0
    - formula: C5H5N5
    - annotation: !!omap
      - biggr: ade_p:0
      - chebi:
        - CHEBI:16708
      - sbo: SBO:0000247
  - !!omap
    - id: sbt__D_p
    - name: D-glucitol
    - compartment: p
    - charge: 0.0
    - formula: C6H14O6
    - annotation: !!omap
      - biggr: sbt__D_p:0
      - chebi:
        - CHEBI:17924
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__S_p
    - name: (S)-propane-1,2-diol
    - compartment: p
    - charge: 0.0
    - formula: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__S_p:0
      - chebi:
        - CHEBI:29002
      - sbo: SBO:0000247
  - !!omap
    - id: dca_p
    - name: decanoate
    - compartment: p
    - charge: -1.0
    - formula: C10H19O2
    - annotation: !!omap
      - biggr: dca_p:-1
      - chebi:
        - CHEBI:27689
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fe3dcit_p
    - name: Fe(III)dicitrate
    - compartment: p
    - charge: -3.0
    - formula: C12H10FeO14
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fe3dcit_p:-3
      - sbo: SBO:0000247
  - !!omap
    - id: h2o2_e
    - name: hydrogen peroxide
    - compartment: e
    - charge: 0.0
    - formula: H2O2
    - annotation: !!omap
      - biggr: h2o2_e:0
      - chebi:
        - CHEBI:16240
      - sbo: SBO:0000247
  - !!omap
    - id: 23cump_e
    - name: 2',3'-cyclic UMP(1-)
    - compartment: e
    - charge: -1.0
    - formula: C9H10N2O8P
    - annotation: !!omap
      - biggr: 23cump_e:-1
      - chebi:
        - CHEBI:60873
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__eca2und_p
    - name: (enterobacterial common antigen)x2 undecaprenyl-diphosphate
    - compartment: p
    - charge: -4.0
    - formula: C103H162N6O37P2
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__eca2und_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: cl_p
    - name: chloride
    - compartment: p
    - charge: -1.0
    - formula: Cl
    - annotation: !!omap
      - biggr: cl_p:-1
      - chebi:
        - CHEBI:17996
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__murein4p3p_p
    - name: Two linked disacharide tetrapeptide and tripeptide murein units 
        (uncrosslinked, middle of chain)
    - compartment: p
    - charge: -4.0
    - formula: C71H109N13O39
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__murein4p3p_p:-4
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr160_p
    - name: 1,2-dipalmitoyl-sn-glycerol
    - compartment: p
    - charge: 0.0
    - formula: C35H68O5
    - annotation: !!omap
      - biggr: 12dgr160_p:0
      - chebi:
        - CHEBI:82929
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__1agpg120_p
    - name: 1-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0)
    - compartment: p
    - charge: -1.0
    - formula: C18H36O9P1
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__1agpg120_p:-1
      - sbo: SBO:0000247
  - !!omap
    - id: tungs_e
    - name: tungstate
    - compartment: e
    - charge: -2.0
    - formula: O4W
    - annotation: !!omap
      - biggr: tungs_e:-2
      - chebi:
        - CHEBI:46502
      - sbo: SBO:0000247
  - !!omap
    - id: 5fthf_c
    - name: (6S)-5-formyltetrahydrofolate(2-)
    - compartment: c
    - charge: -2.0
    - formula: C20H21N7O7
    - annotation: !!omap
      - biggr: 5fthf_c:-2
      - chebi:
        - CHEBI:57457
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__arbtn_fe3_c
    - name: Aerobactin
    - compartment: c
    - charge: 0.0
    - formula: C22H33FeN4O13
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__arbtn_fe3_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C16463_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C16463_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C21214_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C21214_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__fmnh2_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__fmnh2_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C21215_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C21215_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C11478_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C11478_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C04728_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C04728_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__arsna_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__arsna_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C07292_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C07292_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__aso3_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__aso3_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C07293_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C07293_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cph4_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cph4_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__nh4_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__nh4_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__acoa_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__acoa_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C02716_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C02716_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C00399_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C00399_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C00390_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C00390_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C22293_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C22293_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C21563_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C21563_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__h2co3_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__h2co3_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C20641_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C20641_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C03798_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C03798_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C03633_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C03633_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__h2o2_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__h2o2_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__focytcc553_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__focytcc553_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__ficytc_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ficytc_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C03519_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C03519_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C16638_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C16638_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__sectrna_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__sectrna_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C01978_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C01978_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C00028_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C00028_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C19647_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C19647_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C00030_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C00030_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C21171_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C21171_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C21172_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C21172_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C08362_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C08362_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C04253_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C04253_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C04570_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C04570_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__G10618_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G10618_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__G10599_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G10599_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__G10622_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G10622_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__G00008_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G00008_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pglyc_cho_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pglyc_cho_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__cdpdag_cho_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__cdpdag_cho_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__clpn_cho_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__clpn_cho_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C04203_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C04203_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C19459_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C19459_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__pa_EC_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__pa_EC_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__5oxpro_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__5oxpro_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C11516_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C11516_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__manglyc_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__manglyc_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__co2_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__co2_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C00828_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C00828_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C05819_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C05819_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C01087_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C01087_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__no3_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__no3_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C15603_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C15603_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__no2_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__no2_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C15602_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C15602_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C15814_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C15814_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C20246_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C20246_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__C15810_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__C15810_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__mmcoa__R_c
    - name: ''
    - compartment: c
    - charge: 0.0
    - formula: ''
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__mmcoa__R_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 4hba_c
    - name: p-hydroxybenzyl alcohol
    - compartment: c
    - charge: 0.0
    - formula: C7H8O2
    - notes: !!omap
      - original_bigg_ids:
        - 4hba_c
    - annotation: !!omap
      - bigg.metabolite:
        - 4hba
      - biggr: 4hba_c:0
      - biocyc:
        - META:4-HYDROXY-BENZYL-ALCOHOL
      - chebi:
        - CHEBI:67410
      - envipath:
        - 650babc9-9d68-4b73-9332-11972ca26f7b/compound/5fccc743-f94b-40f9-9c78-5f38cf50d217
      - hmdb:
        - HMDB11724
      - inchi_key:
        - BVJSUAQZOZWCKN-UHFFFAOYSA-N
      - kegg.compound:
        - C17467
      - metanetx.chemical:
        - MNXM107505
      - sabiork:
        - '26558'
      - sbo: SBO:0000247
      - seed.compound:
        - cpd17595
        - cpd15378
  - !!omap
    - id: __Ecoli_panGEMs__LptA_p
    - name: 'Periplasmic lipid A binding protein '
    - compartment: p
    - charge: 0.0
    - formula: ''
    - notes: !!omap
      - original_bigg_ids:
        - LptA_p
    - annotation: !!omap
      - bigg.metabolite:
        - LptA
      - biggr: __Ecoli_panGEMs__LptA_p:0
      - metanetx.chemical:
        - MNXM148424
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__enlipidA_LptA_p
    - name: 1' Phosphoethanolamin lipidIVa C70H132N3O26P3
    - compartment: p
    - charge: 0.0
    - formula: C70H132N3O26P3
    - notes: !!omap
      - original_bigg_ids:
        - enlipidA_LptA_p
    - annotation: !!omap
      - bigg.metabolite:
        - enlipidA_LptA
      - biggr: __Ecoli_panGEMs__enlipidA_LptA_p:0
      - metanetx.chemical:
        - MNXM147660
      - sbo: SBO:0000247
  - !!omap
    - id: __Ecoli_panGEMs__enlipidA_e
    - name: 1' Phosphoethanolamin lipidIVa C70H132N3O26P3
    - compartment: e
    - charge: 0.0
    - formula: C70H132N3O26P3
    - notes: !!omap
      - original_bigg_ids:
        - enlipidA_e
    - annotation: !!omap
      - bigg.metabolite:
        - enlipidA
      - biggr: __Ecoli_panGEMs__enlipidA_e:0
      - metanetx.chemical:
        - MNXM147659
      - sbo: SBO:0000247
- reactions:
  - !!omap
    - id: CYTDK2_1
    - name: cytidine kinase (GTP)
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02253
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CYTDK2_1
      - rhea: RHEA:28162
      - sbo: SBO:0000176
  - !!omap
    - id: XPPT
    - name: xanthine phosphoribosyltransferase
    - metabolites: !!omap
      - ppi_c: 1.0
      - prpp_c: -1.0
      - xan_c: -1.0
      - xmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00287
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: XPPT
      - sbo: SBO:0000176
  - !!omap
    - id: HXPRT
    - name: hypoxanthine phosphoribosyltransferase (Hypoxanthine)
    - metabolites: !!omap
      - hxan_c: -1.0
      - imp_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00287 or MNJNJBIH_00161
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: HXPRT
      - rhea: RHEA:17973
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK5
    - name: nucleoside-diphosphate kinase (ATP:dGDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dgdp_c: -1.0
      - dgtp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK5
      - rhea: RHEA:27690
      - sbo: SBO:0000176
  - !!omap
    - id: SHK3Dr
    - name: shikimate dehydrogenase
    - metabolites: !!omap
      - 3dhsk_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - skm_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03627 or MNJNJBIH_01831
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: SHK3Dr
      - rhea: RHEA:17737
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK6
    - name: nucleoside-diphosphate kinase (ATP:dUDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dudp_c: -1.0
      - dutp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK6
      - rhea: RHEA:28582
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK8
    - name: nucleoside-diphosphate kinase (ATP:dADP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dadp_c: -1.0
      - datp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK8
      - rhea: RHEA:27674
      - sbo: SBO:0000176
  - !!omap
    - id: DHORTS
    - name: dihydroorotase
    - metabolites: !!omap
      - cbasp_c: 1.0
      - dhor__S_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01195
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: DHORTS
      - rhea: RHEA:24296
      - sbo: SBO:0000176
  - !!omap
    - id: OMPDC
    - name: orotidine-5'-phosphate decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -1.0
      - orot5p_c: -1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01434
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: OMPDC
      - rhea: RHEA:11596
      - sbo: SBO:0000176
  - !!omap
    - id: PYNP2r
    - name: pyrimidine-nucleoside phosphorylase (uracil)
    - metabolites: !!omap
      - pi_c: -1.0
      - r1p_c: 1.0
      - ura_c: 1.0
      - uri_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04270
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PYNP2r
      - rhea: RHEA:24388
      - sbo: SBO:0000176
  - !!omap
    - id: G5SD
    - name: glutamate-5-semialdehyde dehydrogenase
    - metabolites: !!omap
      - glu5p_c: -1.0
      - glusemald_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00292
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: G5SD
      - rhea: RHEA:19541
      - sbo: SBO:0000176
  - !!omap
    - id: CS
    - name: citrate synthase
    - metabolites: !!omap
      - accoa_c: -1.0
      - cit_c: 1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - oaa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00781
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: CS
      - rhea: RHEA:16845
      - sbo: SBO:0000176
  - !!omap
    - id: ICDHyr
    - name: isocitrate dehydrogenase (NADP)
    - metabolites: !!omap
      - akg_c: 1.0
      - co2_c: 1.0
      - icit_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01282
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: ICDHyr
      - sbo: SBO:0000176
  - !!omap
    - id: ALATA_L2
    - name: alanine transaminase
    - metabolites: !!omap
      - ala__L_c: -1.0
      - pyam5p_c: 1.0
      - pydx5p_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00967 or MNJNJBIH_02786
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ALATA_L2
      - rhea: RHEA:30023
      - sbo: SBO:0000176
  - !!omap
    - id: DURIPP_1
    - name: deoxyuridine phosphorylase
    - metabolites: !!omap
      - 2dr1p_c: 1.0
      - duri_c: -1.0
      - pi_c: -1.0
      - ura_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04856 or MNJNJBIH_04860
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DURIPP_1
      - rhea: RHEA:22824
      - sbo: SBO:0000176
  - !!omap
    - id: ACALD
    - name: acetaldehyde dehydrogenase (acetylating)
    - metabolites: !!omap
      - acald_c: -1.0
      - accoa_c: 1.0
      - coa_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00391 or MNJNJBIH_01378
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: ACALD
      - rhea: RHEA:23288
      - sbo: SBO:0000176
  - !!omap
    - id: CYSDS
    - name: Cysteine Desulfhydrase
    - metabolites: !!omap
      - cys__L_c: -1.0
      - h2o_c: -1.0
      - h2s_c: 1.0
      - nh4_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03321 or MNJNJBIH_04138
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: CYSDS:2
      - rhea: RHEA:24931
      - sbo: SBO:0000176
  - !!omap
    - id: MAN6PI
    - name: mannose-6-phosphate isomerase
    - metabolites: !!omap
      - f6p_c: 1.0
      - man6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01738
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MAN6PI
      - sbo: SBO:0000176
  - !!omap
    - id: IDPh_1
    - name: inorganic diphosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 2.0
      - ppi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_02715 or MNJNJBIH_04737
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: IDPh_1
      - rhea: RHEA:24576
      - sbo: SBO:0000176
  - !!omap
    - id: APRAUR
    - name: 5-amino-6-(5-phosphoribosylamino)uracil reductase
    - metabolites: !!omap
      - 5aprbu_c: 1.0
      - 5apru_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00456
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: APRAUR
      - rhea: RHEA:17845
      - sbo: SBO:0000176
  - !!omap
    - id: TRPAS2
    - name: Tryptophanase (L-tryptophan)
    - metabolites: !!omap
      - h2o_c: -1.0
      - indole_c: 1.0
      - nh4_c: 1.0
      - pyr_c: 1.0
      - trp__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04138
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: TRPAS2
      - sbo: SBO:0000176
  - !!omap
    - id: PPCK
    - name: phosphoenolpyruvate carboxykinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - co2_c: 1.0
      - oaa_c: -1.0
      - pep_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03765
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: PPCK
      - rhea: RHEA:18617
      - sbo: SBO:0000176
  - !!omap
    - id: ME1
    - name: malic enzyme (NAD)
    - metabolites: !!omap
      - co2_c: 1.0
      - mal__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01627
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: ME1
      - rhea: RHEA:12653
      - sbo: SBO:0000176
  - !!omap
    - id: DB4PS
    - name: 3,4-Dihydroxy-2-butanone-4-phosphate synthase
    - metabolites: !!omap
      - db4p_c: 1.0
      - for_c: 1.0
      - h_c: 1.0
      - ru5p__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03355
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DB4PS
      - rhea: RHEA:18457
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RBFK
    - name: Riboflavin kinase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - ribflv_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00040
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RBFK
      - sbo: SBO:0000176
  - !!omap
    - id: ALATA_L
    - name: L-alanine transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - ala__L_c: -1.0
      - glu__L_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02492 or MNJNJBIH_02571
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ALATA_L
      - rhea: RHEA:19453
      - sbo: SBO:0000176
  - !!omap
    - id: RBK
    - name: ribokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - r5p_c: 1.0
      - rib__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04182
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RBK
      - rhea: RHEA:13697
      - sbo: SBO:0000176
  - !!omap
    - id: ASPTA
    - name: aspartate transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - asp__L_c: -1.0
      - glu__L_c: 1.0
      - oaa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01034 or MNJNJBIH_04544
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ASPTA
      - rhea: RHEA:21824
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACP1_FMN
    - name: Acid phosphatase (FMN)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04243 or MNJNJBIH_00491 or MNJNJBIH_00936
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACP1_FMN
      - sbo: SBO:0000176
  - !!omap
    - id: RBFSb
    - name: riboflavin synthase
    - metabolites: !!omap
      - 4r5au_c: 1.0
      - dmlz_c: -2.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01797
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: RBFSb:2
      - rhea: RHEA:20772
      - sbo: SBO:0000176
  - !!omap
    - id: NDP3
    - name: nucleoside-diphosphatase (GDP)
    - metabolites: !!omap
      - gdp_c: -1.0
      - gmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01275 or MNJNJBIH_04023
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDP3
      - rhea: RHEA:22156
      - sbo: SBO:0000176
  - !!omap
    - id: CDPPH
    - name: nucleoside-diphosphatase (CDP)
    - metabolites: !!omap
      - cdp_c: -1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04023
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CDPPH
      - rhea: RHEA:64880
      - sbo: SBO:0000176
  - !!omap
    - id: NDP7
    - name: nucleoside-diphosphatase (UDP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - udp_c: -1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04023
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDP7
      - rhea: RHEA:64876
      - sbo: SBO:0000176
  - !!omap
    - id: FBP
    - name: fructose-bisphosphatase
    - metabolites: !!omap
      - f6p_c: 1.0
      - fdp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04742 or MNJNJBIH_04377 or MNJNJBIH_03208 or 
        MNJNJBIH_04126
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: FBP
      - rhea: RHEA:11064
      - sbo: SBO:0000176
  - !!omap
    - id: EX_pi_e
    - name: Exchange of hydrogenphosphate.
    - metabolites: !!omap
      - pi_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pi_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLGC
    - name: glucose-1-phosphate adenylyltransferase
    - metabolites: !!omap
      - adpglc_c: 1.0
      - atp_c: -1.0
      - g1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03799
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: GLGC
      - sbo: SBO:0000176
  - !!omap
    - id: ALATA_D2
    - name: D-alanine transaminase
    - metabolites: !!omap
      - ala__D_c: -1.0
      - pyam5p_c: 1.0
      - pydx5p_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02786 or MNJNJBIH_00967
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ALATA_D2
      - rhea: RHEA:28562
      - sbo: SBO:0000176
  - !!omap
    - id: PYK
    - name: pyruvate kinase
    - metabolites: !!omap
      - adp_c: -1.0
      - atp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02006 or MNJNJBIH_01811
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PYK
      - rhea: RHEA:18157
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__SHCHD2
    - name: Sirohydrochlorin dehydrogenase (NAD)
    - metabolites: !!omap
      - __Ecoli_panGEMs__scl_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pre2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03723
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__SHCHD2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_co2_e
    - name: Exchange of carbon dioxide.
    - metabolites: !!omap
      - co2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_co2_e
      - sbo: SBO:0000627
  - !!omap
    - id: A5PISO
    - name: arabinose-5-phosphate isomerase
    - metabolites: !!omap
      - ara5p_c: 1.0
      - ru5p__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02947
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: A5PISO
      - rhea: RHEA:23104
      - sbo: SBO:0000176
  - !!omap
    - id: PMDPHT
    - name: pyrimidine phosphatase
    - metabolites: !!omap
      - 4r5au_c: 1.0
      - 5aprbu_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00936 or MNJNJBIH_04243
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PMDPHT
      - rhea: RHEA:25197
      - sbo: SBO:0000176
  - !!omap
    - id: CPPPGO
    - name: coproporphyrinogen oxidase (O2 required)
    - metabolites: !!omap
      - co2_c: 2.0
      - cpppg3_c: -1.0
      - h2o_c: 2.0
      - h_c: -2.0
      - o2_c: -1.0
      - pppg9_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02641
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CPPPGO
      - rhea: RHEA:18257
      - sbo: SBO:0000176
  - !!omap
    - id: EX_met__L_e
    - name: Exchange of L-methionine zwitterion.
    - metabolites: !!omap
      - met__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_met__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: GTHOr
    - name: glutathione oxidoreductase
    - metabolites: !!omap
      - gthox_c: -1.0
      - gthrd_c: 2.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03880
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GTHOr
      - rhea: RHEA:11740
      - sbo: SBO:0000176
  - !!omap
    - id: ILETA
    - name: isoleucine transaminase
    - metabolites: !!omap
      - 3mop_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - ile__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04197
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: ILETA
      - rhea: RHEA:24801
      - sbo: SBO:0000176
  - !!omap
    - id: DHORD5
    - name: dihydroorotic acid (menaquinone-8)
    - metabolites: !!omap
      - dhor__S_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - orot_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01057
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: DHORD5
      - rhea: RHEA:29199
      - sbo: SBO:0000176
  - !!omap
    - id: EX_metsox_S__L_e
    - name: Exchange of L-methionine (S)-S-oxide zwitterion.
    - metabolites: !!omap
      - metsox_S__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_metsox_S__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: VALTA
    - name: valine transaminase
    - metabolites: !!omap
      - 3mob_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - val__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04197
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: VALTA
      - rhea: RHEA:24813
      - sbo: SBO:0000176
  - !!omap
    - id: ORPT
    - name: orotate phosphoribosyltransferase
    - metabolites: !!omap
      - orot5p_c: -1.0
      - orot_c: 1.0
      - ppi_c: -1.0
      - prpp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04053
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: ORPT
      - rhea: RHEA:10380
      - sbo: SBO:0000176
  - !!omap
    - id: RBFSa_1
    - name: riboflavin synthase
    - metabolites: !!omap
      - 4r5au_c: -1.0
      - db4p_c: -1.0
      - dmlz_c: 1.0
      - h2o_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00457
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: RBFSa_1:2
      - rhea: RHEA:26152
      - sbo: SBO:0000176
  - !!omap
    - id: ACHBS
    - name: 2-aceto-2-hydroxybutanoate synthase
    - metabolites: !!omap
      - 2ahbut_c: 1.0
      - 2obut_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00108 and MNJNJBIH_00109
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: ACHBS
      - rhea: RHEA:27654
      - sbo: SBO:0000176
  - !!omap
    - id: PFK_3
    - name: phosphofructokinase (s7p)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - s17bp_c: 1.0
      - s7p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04368
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: PFK_3
      - rhea: RHEA:31443
      - sbo: SBO:0000176
  - !!omap
    - id: ACLS
    - name: acetolactate synthase
    - metabolites: !!omap
      - alac__S_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pyr_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00108 and MNJNJBIH_00109
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: ACLS
      - rhea: RHEA:25249
      - sbo: SBO:0000176
  - !!omap
    - id: TRPS2
    - name: tryptophan synthase (indole)
    - metabolites: !!omap
      - h2o_c: 1.0
      - indole_c: -1.0
      - ser__L_c: -1.0
      - trp__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01406 and MNJNJBIH_01407
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: TRPS2
      - sbo: SBO:0000176
  - !!omap
    - id: PSCVT
    - name: 3-phosphoshikimate 1-carboxyvinyltransferase
    - metabolites: !!omap
      - 3psme_c: 1.0
      - pep_c: -1.0
      - pi_c: 1.0
      - skm5p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01012
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: PSCVT
      - rhea: RHEA:21256
      - sbo: SBO:0000176
  - !!omap
    - id: G3PD5
    - name: glycerol-3-phosphate dehydrogenase (ubiquinone-8)
    - metabolites: !!omap
      - dhap_c: 1.0
      - glyc3p_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03790
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: G3PD5
      - rhea: RHEA:28751
      - sbo: SBO:0000176
  - !!omap
    - id: G1PP
    - name: Glucose-1-phosphatase
    - metabolites: !!omap
      - g1p_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04331 or MNJNJBIH_04126
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: G1PP
      - sbo: SBO:0000176
  - !!omap
    - id: PFL
    - name: pyruvate formate lyase
    - metabolites: !!omap
      - accoa_c: 1.0
      - coa_c: -1.0
      - for_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01006 and MNJNJBIH_01007) or (MNJNJBIH_01006
        and MNJNJBIH_03444) or ((MNJNJBIH_01006 and MNJNJBIH_01007) and 
        MNJNJBIH_02821)
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: PFL
      - rhea: RHEA:11844
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acgam_e
    - name: Exchange of N-acetyl-D-glucosamine.
    - metabolites: !!omap
      - acgam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acgam_e
      - sbo: SBO:0000627
  - !!omap
    - id: ANS
    - name: anthranilate synthase
    - metabolites: !!omap
      - anth_c: 1.0
      - chor_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01409 and MNJNJBIH_01412
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: ANS
      - rhea: RHEA:21732
      - sbo: SBO:0000176
  - !!omap
    - id: FRD2
    - name: fumarate reductase
    - metabolites: !!omap
      - fum_c: -1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04645 and MNJNJBIH_04644 and MNJNJBIH_04646 
        and MNJNJBIH_04647
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: FRD2
      - rhea: RHEA:29215
      - sbo: SBO:0000176
  - !!omap
    - id: FRD3
    - name: fumarate reductase
    - metabolites: !!omap
      - 2dmmq8_c: 1.0
      - 2dmmql8_c: -1.0
      - fum_c: -1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04645 and MNJNJBIH_04644 and MNJNJBIH_04646 
        and MNJNJBIH_04647
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: FRD3
      - sbo: SBO:0000176
  - !!omap
    - id: ANPRT
    - name: anthranilate phosphoribosyltransferase
    - metabolites: !!omap
      - anth_c: -1.0
      - ppi_c: 1.0
      - pran_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01409
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: ANPRT
      - rhea: RHEA:11768
      - sbo: SBO:0000176
  - !!omap
    - id: CHORM
    - name: chorismate mutase
    - metabolites: !!omap
      - chor_c: -1.0
      - pphn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02845 or MNJNJBIH_02846
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: CHORM
      - sbo: SBO:0000176
  - !!omap
    - id: PTAr
    - name: phosphotransacetylase
    - metabolites: !!omap
      - accoa_c: -1.0
      - actp_c: 1.0
      - coa_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02499
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: PTAr
      - rhea: RHEA:19521
      - sbo: SBO:0000176
  - !!omap
    - id: CHORS
    - name: chorismate synthase
    - metabolites: !!omap
      - 3psme_c: -1.0
      - chor_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02534
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: CHORS
      - rhea: RHEA:21020
      - sbo: SBO:0000176
  - !!omap
    - id: IGPS
    - name: indole-3-glycerol-phosphate synthase
    - metabolites: !!omap
      - 2cpr5p_c: -1.0
      - 3ig3p_c: 1.0
      - co2_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01408
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: IGPS
      - rhea: RHEA:23476
      - sbo: SBO:0000176
  - !!omap
    - id: ACKr
    - name: acetate kinase
    - metabolites: !!omap
      - ac_c: -1.0
      - actp_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02498 or MNJNJBIH_02000 or MNJNJBIH_03445
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: ACKr
      - rhea: RHEA:11352
      - sbo: SBO:0000176
  - !!omap
    - id: EX_cellb_e
    - name: Exchange of cellobiose.
    - metabolites: !!omap
      - cellb_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cellb_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_crn_e
    - name: Exchange of (R)-carnitine.
    - metabolites: !!omap
      - crn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_crn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_hxan_e
    - name: Exchange of hypoxanthine.
    - metabolites: !!omap
      - hxan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hxan_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ile__L_e
    - name: Exchange of L-isoleucine zwitterion.
    - metabolites: !!omap
      - ile__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ile__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_chol_e
    - name: Exchange of choline.
    - metabolites: !!omap
      - chol_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_chol_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fe3_e
    - name: Exchange of iron(3+).
    - metabolites: !!omap
      - fe3_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fe3_e
      - sbo: SBO:0000627
  - !!omap
    - id: LEUTAi
    - name: leucine transaminase (irreversible)
    - metabolites: !!omap
      - 4mop_c: -1.0
      - akg_c: 1.0
      - glu__L_c: -1.0
      - leu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04197 or MNJNJBIH_04544
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: LEUTAi
      - rhea: RHEA:18321
      - sbo: SBO:0000176
  - !!omap
    - id: EX_lac__L_e
    - name: Exchange of (S)-lactate.
    - metabolites: !!omap
      - lac__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lac__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_leu__L_e
    - name: Exchange of L-leucine zwitterion.
    - metabolites: !!omap
      - leu__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_leu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glcn_e
    - name: Exchange of D-gluconate.
    - metabolites: !!omap
      - glcn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_no3_e
    - name: Exchange of nitrate.
    - metabolites: !!omap
      - no3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_no3_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_h_e
    - name: Exchange of hydron.
    - metabolites: !!omap
      - h_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h_e
      - sbo: SBO:0000627
  - !!omap
    - id: DMATT
    - name: dimethylallyltranstransferase
    - metabolites: !!omap
      - dmpp_c: -1.0
      - grdp_c: 1.0
      - ipdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00463
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DMATT
      - rhea: RHEA:22408
      - sbo: SBO:0000176
  - !!omap
    - id: EX_orn__L_e
    - name: Exchange of L-ornithinium(1+).
    - metabolites: !!omap
      - orn__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_orn__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: GRTT
    - name: geranyltranstransferase
    - metabolites: !!omap
      - frdp_c: 1.0
      - grdp_c: -1.0
      - ipdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00463
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GRTT
      - rhea: RHEA:19361
      - sbo: SBO:0000176
  - !!omap
    - id: EX_gln__L_e
    - name: Exchange of L-glutamine zwitterion.
    - metabolites: !!omap
      - gln__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gln__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: UPP3S
    - name: uroporphyrinogen-III synthase
    - metabolites: !!omap
      - h2o_c: 1.0
      - hmbil_c: -1.0
      - uppg3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04235
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: UPP3S
      - rhea: RHEA:18965
      - sbo: SBO:0000176
  - !!omap
    - id: EX_pro__L_e
    - name: Exchange of L-proline zwitterion.
    - metabolites: !!omap
      - pro__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pro__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glyc_e
    - name: Exchange of glycerol.
    - metabolites: !!omap
      - glyc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyc_e
      - sbo: SBO:0000627
  - !!omap
    - id: UPPDC1
    - name: uroporphyrinogen decarboxylase (uroporphyrinogen III)
    - metabolites: !!omap
      - co2_c: 4.0
      - cpppg3_c: 1.0
      - h_c: -4.0
      - uppg3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04467
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: UPPDC1
      - rhea: RHEA:19865
      - sbo: SBO:0000176
  - !!omap
    - id: EX_man_e
    - name: Exchange of D-mannopyranose.
    - metabolites: !!omap
      - man_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_man_e
      - sbo: SBO:0000627
  - !!omap
    - id: TMDPP
    - name: thymidine phosphorylase
    - metabolites: !!omap
      - 2dr1p_c: 1.0
      - pi_c: -1.0
      - thym_c: 1.0
      - thymd_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04856
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: TMDPP
      - rhea: RHEA:16037
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ade_e
    - name: Exchange of adenine.
    - metabolites: !!omap
      - ade_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ade_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mn2_e
    - name: Exchange of manganese(2+).
    - metabolites: !!omap
      - mn2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mn2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_4abut_e
    - name: Exchange of gamma-aminobutyric acid zwitterion.
    - metabolites: !!omap
      - 4abut_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_4abut_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ac_e
    - name: Exchange of acetate.
    - metabolites: !!omap
      - ac_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ac_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_akg_e
    - name: Exchange of 2-oxoglutarate(2-).
    - metabolites: !!omap
      - akg_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_akg_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ala__L_e
    - name: Exchange of L-alanine zwitterion.
    - metabolites: !!omap
      - ala__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ala__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_arg__L_e
    - name: Exchange of L-argininium(1+).
    - metabolites: !!omap
      - arg__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arg__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_asp__L_e
    - name: Exchange of L-aspartate(1-).
    - metabolites: !!omap
      - asp__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_asp__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pyr_e
    - name: Exchange of pyruvate.
    - metabolites: !!omap
      - pyr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pyr_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_succ_e
    - name: Exchange of succinate(2-).
    - metabolites: !!omap
      - succ_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_succ_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_thymd_e
    - name: Exchange of thymidine.
    - metabolites: !!omap
      - thymd_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thymd_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_rib__D_e
    - name: Exchange of D-ribofuranose.
    - metabolites: !!omap
      - rib__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_rib__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tyr__L_e
    - name: Exchange of L-tyrosine zwitterion.
    - metabolites: !!omap
      - tyr__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tyr__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cytd_e
    - name: Exchange of cytidine.
    - metabolites: !!omap
      - cytd_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cytd_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_dcyt_e
    - name: Exchange of 2'-deoxycytidine.
    - metabolites: !!omap
      - dcyt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dcyt_e
      - sbo: SBO:0000627
  - !!omap
    - id: MOAT
    - name: 3-deoxy-D-manno-octulosonic acid transferase
    - metabolites: !!omap
      - ckdo_c: -1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - kdolipid4_c: 1.0
      - lipidA_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04043
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: MOAT
      - rhea: RHEA:28066
      - sbo: SBO:0000176
  - !!omap
    - id: EX_fum_e
    - name: Exchange of fumarate(2-).
    - metabolites: !!omap
      - fum_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fum_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_sbt__D_e
    - name: Exchange of D-glucitol.
    - metabolites: !!omap
      - sbt__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sbt__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glu__L_e
    - name: Exchange of L-glutamate(1-).
    - metabolites: !!omap
      - glu__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: UDCPDPS
    - name: Undecaprenyl diphosphate synthase
    - metabolites: !!omap
      - frdp_c: -1.0
      - ipdp_c: -8.0
      - ppi_c: 8.0
      - udcpdp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00215
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: UDCPDPS
      - rhea: RHEA:27551
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH6
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA)
    - metabolites: !!omap
      - 3htdcoa_c: -1.0
      - h2o_c: 1.0
      - td2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH6
      - rhea: RHEA:31171
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__USHD
    - name: UDP-sugar hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__u23ga_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - lipidX_c: 1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00581
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__USHD
      - sbo: SBO:0000176
  - !!omap
    - id: EX_gua_e
    - name: Exchange of guanine.
    - metabolites: !!omap
      - gua_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gua_e
      - sbo: SBO:0000627
  - !!omap
    - id: ENO
    - name: enolase
    - metabolites: !!omap
      - 2pg_c: -1.0
      - h2o_c: 1.0
      - pep_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03034
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: ENO
      - rhea: RHEA:10164
      - sbo: SBO:0000176
  - !!omap
    - id: FBA
    - name: fructose-bisphosphate aldolase
    - metabolites: !!omap
      - dhap_c: 1.0
      - fdp_c: -1.0
      - g3p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03203 or MNJNJBIH_05603
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: FBA
      - sbo: SBO:0000176
  - !!omap
    - id: H2CO3D
    - name: HCO3 equilibration reaction
    - metabolites: !!omap
      - co2_c: -1.0
      - h2co3_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00162
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: H2CO3D
      - rhea: RHEA:10748
      - sbo: SBO:0000176
  - !!omap
    - id: MGSA
    - name: methylglyoxal synthase
    - metabolites: !!omap
      - dhap_c: -1.0
      - mthgxl_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01078
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: MGSA
      - rhea: RHEA:17937
      - sbo: SBO:0000176
  - !!omap
    - id: IMPD
    - name: IMP dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - imp_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - xmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02724
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: IMPD
      - rhea: RHEA:11708
      - sbo: SBO:0000176
  - !!omap
    - id: PPS
    - name: phosphoenolpyruvate synthase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pep_c: 1.0
      - pi_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01842
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PPS
      - rhea: RHEA:11364
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH4
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)
    - metabolites: !!omap
      - 3hdcoa_c: -1.0
      - dc2coa_c: 1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH4
      - rhea: RHEA:31191
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPADSS
    - name: Lipid A disaccaride synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__u23ga_c: -1.0
      - h_c: 1.0
      - lipidAds_c: 1.0
      - lipidX_c: -1.0
      - udp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00223
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPADSS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLUTRS
    - name: Glutamyl-tRNA synthetase
    - metabolites: !!omap
      - __Ecoli_panGEMs__glutrna_c: 1.0
      - __Ecoli_panGEMs__trnaglu_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - glu__L_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02599
    - subsystem: tRNA Charging
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLUTRS
      - sbo: SBO:0000176
  - !!omap
    - id: TDSK
    - name: Tetraacyldisaccharide 4'kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - lipidA_c: 1.0
      - lipidAds_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01019
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: TDSK
      - rhea: RHEA:20700
      - sbo: SBO:0000176
  - !!omap
    - id: PGI
    - name: glucose-6-phosphate isomerase
    - metabolites: !!omap
      - f6p_c: 1.0
      - g6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04504
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PGI
      - sbo: SBO:0000176
  - !!omap
    - id: EX_btn_e
    - name: Exchange of biotinate.
    - metabolites: !!omap
      - btn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_btn_e
      - sbo: SBO:0000627
  - !!omap
    - id: PGK
    - name: phosphoglycerate kinase
    - metabolites: !!omap
      - 13dpg_c: 1.0
      - 3pg_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03204
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PGK
      - rhea: RHEA:14801
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ptrc_e
    - name: Exchange of 1,4-butanediammonium.
    - metabolites: !!omap
      - ptrc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ptrc_e
      - sbo: SBO:0000627
  - !!omap
    - id: EDA
    - name: 2-dehydro-3-deoxy-phosphogluconate aldolase
    - metabolites: !!omap
      - 2ddg6p_c: -1.0
      - g3p_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02001
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: EDA
      - sbo: SBO:0000176
  - !!omap
    - id: EX_spmd_e
    - name: Exchange of spermidine(3+).
    - metabolites: !!omap
      - spmd_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_spmd_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_thym_e
    - name: Exchange of thymine.
    - metabolites: !!omap
      - thym_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thym_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_xtsn_e
    - name: Exchange of xanthosine.
    - metabolites: !!omap
      - xtsn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xtsn_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTPP1
    - name: Nucleoside triphosphate pyrophosphorylase (dgtp)
    - metabolites: !!omap
      - dgmp_c: 1.0
      - dgtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00132 or MNJNJBIH_03036
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP1
      - rhea: RHEA:28362
      - sbo: SBO:0000176
  - !!omap
    - id: URIK1_1
    - name: uridine kinase (ATP:Uridine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02253
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: URIK1_1
      - rhea: RHEA:16825
      - sbo: SBO:0000176
  - !!omap
    - id: URIK2
    - name: uridine kinase (GTP:Uridine)
    - metabolites: !!omap
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02253
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: URIK2
      - rhea: RHEA:27650
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP2_1
    - name: Nucleoside triphosphate pyrophosphorylase (gtp)
    - metabolites: !!omap
      - gmp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00132 or MNJNJBIH_03036
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP2_1
      - rhea: RHEA:29391
      - sbo: SBO:0000176
  - !!omap
    - id: PGL
    - name: 6-phosphogluconolactonase
    - metabolites: !!omap
      - 6pgc_c: 1.0
      - 6pgl_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05041
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: PGL
      - rhea: RHEA:12556
      - sbo: SBO:0000176
  - !!omap
    - id: NTPTP1
    - name: Nucleoside triphosphate tripolyhydrolase
    - metabolites: !!omap
      - dgsn_c: 1.0
      - dgtp_c: -1.0
      - h2o_c: -1.0
      - pppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00200
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPTP1:2
      - rhea: RHEA:15193
      - sbo: SBO:0000176
  - !!omap
    - id: NTPTP2
    - name: Nucleoside triphosphate tripolyhydrolase
    - metabolites: !!omap
      - gsn_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - pppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00200
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPTP2:2
      - rhea: RHEA:30559
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDK1
    - name: cytidine kinase (ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02253
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CYTDK1
      - rhea: RHEA:24674
      - sbo: SBO:0000176
  - !!omap
    - id: RPE
    - name: ribulose 5-phosphate 3-epimerase
    - metabolites: !!omap
      - ru5p__D_c: -1.0
      - xu5p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03743
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: RPE
      - rhea: RHEA:13677
      - sbo: SBO:0000176
  - !!omap
    - id: DHQTi
    - name: 3-dehydroquinate dehydratase, irreversible
    - metabolites: !!omap
      - 3dhq_c: -1.0
      - 3dhsk_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01832
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: DHQTi
      - rhea: RHEA:21096
      - sbo: SBO:0000176
  - !!omap
    - id: IPMD
    - name: 3-isopropylmalate dehydrogenase
    - metabolites: !!omap
      - 3c2hmp_c: -1.0
      - 3c4mop_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00104 or MNJNJBIH_01947
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: IPMD
      - rhea: RHEA:10892
      - sbo: SBO:0000176
  - !!omap
    - id: AIRC3
    - name: phosphoribosylaminoimidazole carboxylase (mutase rxn)
    - metabolites: !!omap
      - 5aizc_c: -1.0
      - 5caiz_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00579
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: AIRC3:2
      - rhea: RHEA:13193
      - sbo: SBO:0000176
  - !!omap
    - id: TALA
    - name: transaldolase
    - metabolites: !!omap
      - e4p_c: 1.0
      - f6p_c: 1.0
      - g3p_c: -1.0
      - s7p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00021 or MNJNJBIH_02663
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: TALA
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP1
    - name: purine-nucleoside phosphorylase (Adenosine)
    - metabolites: !!omap
      - ade_c: 1.0
      - adn_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04860
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP1
      - rhea: RHEA:27642
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP2_1
    - name: purine-nucleoside phosphorylase (Deoxyadenosine)
    - metabolites: !!omap
      - 2dr1p_c: 1.0
      - ade_c: 1.0
      - dad_2_c: -1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04860
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP2_1
      - rhea: RHEA:27742
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP3
    - name: purine-nucleoside phosphorylase (Guanosine)
    - metabolites: !!omap
      - gsn_c: -1.0
      - gua_c: 1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02607 or MNJNJBIH_04860
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP3
      - rhea: RHEA:13233
      - sbo: SBO:0000176
  - !!omap
    - id: ADSL2r
    - name: adenylosuccinate lyase
    - metabolites: !!omap
      - 25aics_c: -1.0
      - aicar_c: 1.0
      - fum_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01273
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: ADSL2r
      - rhea: RHEA:23920
      - sbo: SBO:0000176
  - !!omap
    - id: TKT1
    - name: transketolase
    - metabolites: !!omap
      - g3p_c: 1.0
      - r5p_c: -1.0
      - s7p_c: 1.0
      - xu5p__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03213
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: TKT1
      - sbo: SBO:0000176
  - !!omap
    - id: EX_fe2_e
    - name: Exchange of iron(2+).
    - metabolites: !!omap
      - fe2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fe2_e
      - sbo: SBO:0000627
  - !!omap
    - id: PUNP5
    - name: purine-nucleoside phosphorylase (Inosine)
    - metabolites: !!omap
      - hxan_c: 1.0
      - ins_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02607 or MNJNJBIH_04860
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP5
      - rhea: RHEA:27646
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP6
    - name: purine-nucleoside phosphorylase (Deoxyinosine)
    - metabolites: !!omap
      - 2dr1p_c: 1.0
      - din_c: -1.0
      - hxan_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04860 or MNJNJBIH_02607
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP6
      - rhea: RHEA:27750
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP7
    - name: purine-nucleoside phosphorylase (Xanthosine)
    - metabolites: !!omap
      - pi_c: -1.0
      - r1p_c: 1.0
      - xan_c: 1.0
      - xtsn_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02607
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP7
      - sbo: SBO:0000176
  - !!omap
    - id: G6PDA
    - name: glucosamine-6-phosphate deaminase
    - metabolites: !!omap
      - f6p_c: 1.0
      - gam6p_c: -1.0
      - h2o_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00729
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: G6PDA
      - rhea: RHEA:12172
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR1
    - name: Ribonucleoside-diphosphate reductase (ADP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - adp_c: -1.0
      - dadp_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02826 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429)) or (MNJNJBIH_04210 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429))
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR1
      - sbo: SBO:0000176
  - !!omap
    - id: ALCD2x
    - name: alcohol dehydrogenase (ethanol)
    - metabolites: !!omap
      - acald_c: 1.0
      - etoh_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01378 or MNJNJBIH_01626
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: ALCD2x
      - rhea: RHEA:25290
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR3
    - name: Ribonucleoside-diphosphate reductase (CDP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - cdp_c: -1.0
      - dcdp_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04210 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429)) or (MNJNJBIH_02826 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429))
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR4
    - name: Ribonucleoside-diphosphate reductase (UDP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - dudp_c: 1.0
      - h2o_c: 1.0
      - udp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04210 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429)) or ((MNJNJBIH_02428 and MNJNJBIH_02429) and 
        MNJNJBIH_02826)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR4
      - sbo: SBO:0000176
  - !!omap
    - id: ALDD2y
    - name: aldehyde dehydrogenase (acetaldehyde, NADP)
    - metabolites: !!omap
      - ac_c: 1.0
      - acald_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03991 or MNJNJBIH_03325 or MNJNJBIH_03317 or 
        MNJNJBIH_00548 or MNJNJBIH_04777
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALDD2y
      - rhea: RHEA:25298
      - sbo: SBO:0000176
  - !!omap
    - id: TMDS
    - name: thymidylate synthase
    - metabolites: !!omap
      - dhf_c: 1.0
      - dtmp_c: 1.0
      - dump_c: -1.0
      - mlthf_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03087
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: TMDS
      - rhea: RHEA:12104
      - sbo: SBO:0000176
  - !!omap
    - id: RMI
    - name: L-rhamnose isomerase
    - metabolites: !!omap
      - rml_c: 1.0
      - rmn_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04354
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RMI
      - rhea: RHEA:23160
      - sbo: SBO:0000176
  - !!omap
    - id: TMDK1
    - name: thymidine kinase (ATP:thymidine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dtmp_c: 1.0
      - h_c: 1.0
      - thymd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01375
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: TMDK1
      - rhea: RHEA:19129
      - sbo: SBO:0000176
  - !!omap
    - id: LYSAM
    - name: lysine 2,3-aminomutase
    - metabolites: !!omap
      - 36dahx_c: 1.0
      - lys__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04637
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: LYSAM
      - rhea: RHEA:19177
      - sbo: SBO:0000176
  - !!omap
    - id: PPCDC
    - name: phosphopantothenoylcysteine decarboxylase
    - metabolites: !!omap
      - 4ppcys_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pan4p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04050
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PPCDC
      - rhea: RHEA:16793
      - sbo: SBO:0000176
  - !!omap
    - id: FTHFD
    - name: formyltetrahydrofolate deformylase
    - metabolites: !!omap
      - 10fthf_c: -1.0
      - for_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - thf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01369
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: FTHFD
      - rhea: RHEA:19833
      - sbo: SBO:0000176
  - !!omap
    - id: EX_glc__D_e
    - name: Exchange of D-glucopyranose.
    - metabolites: !!omap
      - glc__D_e: -1.0
    - lower_bound: -20.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glc__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_alltn_e
    - name: Allantoin exchange
    - metabolites: !!omap
      - alltn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_alltn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EDD
    - name: 6-phosphogluconate dehydratase
    - metabolites: !!omap
      - 2ddg6p_c: 1.0
      - 6pgc_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02002
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: EDD
      - rhea: RHEA:17277
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ura_e
    - name: Exchange of uracil.
    - metabolites: !!omap
      - ura_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ura_e
      - sbo: SBO:0000627
  - !!omap
    - id: NADH9
    - name: NADH dehydrogenase (demethylmenaquinone-8 & 0 protons)
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - 2dmmql8_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01247 or MNJNJBIH_00069 or MNJNJBIH_04143
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADH9
      - rhea: RHEA:30507
      - sbo: SBO:0000176
  - !!omap
    - id: EX_val__L_e
    - name: Exchange of L-valine zwitterion.
    - metabolites: !!omap
      - val__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_val__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: NADH10
    - name: NADH dehydrogenase (menaquinone-8 & 0 protons)
    - metabolites: !!omap
      - h_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01247 or MNJNJBIH_04143 or MNJNJBIH_00069
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADH10
      - rhea: RHEA:29243
      - sbo: SBO:0000176
  - !!omap
    - id: ADK4
    - name: adentylate kinase (ITP)
    - metabolites: !!omap
      - adp_c: 1.0
      - amp_c: -1.0
      - idp_c: 1.0
      - itp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADK4
      - rhea: RHEA:29867
      - sbo: SBO:0000176
  - !!omap
    - id: INSK
    - name: insosine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - imp_c: 1.0
      - ins_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00527
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: INSK
      - rhea: RHEA:21140
      - sbo: SBO:0000176
  - !!omap
    - id: MDHi2
    - name: malate dehydrogenase
    - metabolites: !!omap
      - h_c: 1.0
      - mal__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - oaa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03578
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: MDHi2
      - rhea: RHEA:21432
      - sbo: SBO:0000176
  - !!omap
    - id: ABTA
    - name: 4-aminobutyrate transaminase
    - metabolites: !!omap
      - 4abut_c: -1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - sucsal_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02898
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ABTA
      - rhea: RHEA:23352
      - sbo: SBO:0000176
  - !!omap
    - id: EX_xan_e
    - name: Xanthine exchange
    - metabolites: !!omap
      - xan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xan_e
      - sbo: SBO:0000627
  - !!omap
    - id: FUM
    - name: fumarase
    - metabolites: !!omap
      - fum_c: -1.0
      - h2o_c: -1.0
      - mal__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01737 or MNJNJBIH_04608 or MNJNJBIH_01736
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: FUM
      - rhea: RHEA:12460
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FMNAT
    - name: FMN adenylyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__fmn_c: -1.0
      - atp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00040
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FMNAT
      - sbo: SBO:0000176
  - !!omap
    - id: PYDXNK
    - name: pyridoxine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pdx5p_c: 1.0
      - pydxn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02620
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PYDXNK
      - rhea: RHEA:25108
      - sbo: SBO:0000176
  - !!omap
    - id: PYAM5PO
    - name: pyridoxamine 5'-phosphate oxidase
    - metabolites: !!omap
      - h2o2_c: 1.0
      - h2o_c: -1.0
      - nh4_c: 1.0
      - o2_c: -1.0
      - pyam5p_c: -1.0
      - pydx5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01769
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PYAM5PO
      - rhea: RHEA:15817
      - sbo: SBO:0000176
  - !!omap
    - id: SSALx
    - name: succinate-semialdehyde dehydrogenase (NAD)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - succ_c: 1.0
      - sucsal_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01679
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SSALx
      - rhea: RHEA:13217
      - sbo: SBO:0000176
  - !!omap
    - id: ASPT
    - name: L-aspartase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - fum_c: 1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04629
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ASPT
      - rhea: RHEA:16601
      - sbo: SBO:0000176
  - !!omap
    - id: OHPBAT
    - name: O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - ohpb_c: -1.0
      - phthr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01011
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OHPBAT
      - rhea: RHEA:16573
      - sbo: SBO:0000176
  - !!omap
    - id: SERD_L
    - name: L-serine deaminase
    - metabolites: !!omap
      - nh4_c: 1.0
      - pyr_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03441 or MNJNJBIH_01961 or MNJNJBIH_04138 or 
        MNJNJBIH_03447
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: SERD_L
      - rhea: RHEA:19169
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dgsn_e
    - name: Exchange of 2'-deoxyguanosine.
    - metabolites: !!omap
      - dgsn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dgsn_e
      - sbo: SBO:0000627
  - !!omap
    - id: NPH
    - name: NAD diphosphatase
    - metabolites: !!omap
      - amp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nmn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04466 or MNJNJBIH_02612
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NPH
      - rhea: RHEA:11800
      - sbo: SBO:0000176
  - !!omap
    - id: EX_arab__L_e
    - name: L-Arabinose exchange
    - metabolites: !!omap
      - arab__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arab__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fru_e
    - name: Exchange of beta-D-fructofuranose.
    - metabolites: !!omap
      - fru_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fru_e
      - sbo: SBO:0000627
  - !!omap
    - id: THRD
    - name: L-threonine dehydrogenase
    - metabolites: !!omap
      - 2aobut_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - thr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04025 or MNJNJBIH_03992
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: THRD
      - rhea: RHEA:13161
      - sbo: SBO:0000176
  - !!omap
    - id: HEX4
    - name: hexokinase (D-mannose:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - man6p_c: 1.0
      - man_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HEX4
      - sbo: SBO:0000176
  - !!omap
    - id: EX_gal_e
    - name: Exchange of alpha-D-galactose.
    - metabolites: !!omap
      - gal_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gal_e
      - sbo: SBO:0000627
  - !!omap
    - id: NMNAT
    - name: nicotinamide-nucleotide adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nmn_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04867 or MNJNJBIH_00692
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NMNAT
      - rhea: RHEA:21360
      - sbo: SBO:0000176
  - !!omap
    - id: EX_xyl__D_e
    - name: Exchange of D-xylopyranose.
    - metabolites: !!omap
      - xyl__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xyl__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: KARA1
    - name: ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate)
    - metabolites: !!omap
      - 23dhmb_c: -1.0
      - alac__S_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04202
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: KARA1
      - rhea: RHEA:22068
      - sbo: SBO:0000176
  - !!omap
    - id: HMPK1
    - name: hydroxymethylpyrimidine kinase (ATP)
    - metabolites: !!omap
      - 4ahmmp_c: -1.0
      - 4ampm_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02287 or MNJNJBIH_02620
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: HMPK1
      - rhea: RHEA:23096
      - sbo: SBO:0000176
  - !!omap
    - id: KARA2
    - name: ketol-acid reductoisomerase (2-Acetolactate)
    - metabolites: !!omap
      - 23dhmp_c: 1.0
      - 2ahbut_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04202
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: KARA2
      - rhea: RHEA:13493
      - sbo: SBO:0000176
  - !!omap
    - id: EX_duri_e
    - name: Exchange of 2'-deoxyuridine.
    - metabolites: !!omap
      - duri_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_duri_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_for_e
    - name: Exchange of formate.
    - metabolites: !!omap
      - for_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_for_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gly_e
    - name: Exchange of glycine zwitterion.
    - metabolites: !!omap
      - gly_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_h2_e
    - name: Exchange of dihydrogen.
    - metabolites: !!omap
      - h2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_lys__L_e
    - name: Exchange of L-lysinium(1+).
    - metabolites: !!omap
      - lys__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lys__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACCOAC
    - name: acetyl-CoA carboxylase
    - metabolites: !!omap
      - accoa_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2co3_c: -1.0
      - h_c: 1.0
      - malcoa_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02518 and MNJNJBIH_03599 and MNJNJBIH_03600 
        and MNJNJBIH_00226
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACCOAC
      - rhea: RHEA:11308
      - sbo: SBO:0000176
  - !!omap
    - id: NADK
    - name: NAD kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02860
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NADK
      - rhea: RHEA:18629
      - sbo: SBO:0000176
  - !!omap
    - id: GLXCL
    - name: glyoxalate carboligase
    - metabolites: !!omap
      - 2h3opp_c: 1.0
      - co2_c: 1.0
      - glx_c: -2.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00561
    - subsystem: Glyoxylate Metabolism
    - annotation: !!omap
      - biggr: GLXCL
      - rhea: RHEA:10136
      - sbo: SBO:0000176
  - !!omap
    - id: ICHORS
    - name: isochorismate synthase
    - metabolites: !!omap
      - chor_c: -1.0
      - ichor_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02464
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ICHORS
      - rhea: RHEA:18985
      - sbo: SBO:0000176
  - !!omap
    - id: DHBD
    - name: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
    - metabolites: !!omap
      - 23ddhb_c: -1.0
      - 23dhb_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00642
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHBD
      - sbo: SBO:0000176
  - !!omap
    - id: ICHORT
    - name: isochorismatase
    - metabolites: !!omap
      - 23ddhb_c: 1.0
      - h2o_c: -1.0
      - ichor_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00640
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ICHORT
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ser__L_e
    - name: Exchange of L-serine zwitterion.
    - metabolites: !!omap
      - ser__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ser__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_thm_e
    - name: Exchange of thiamine(1+).
    - metabolites: !!omap
      - thm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thm_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_trp__L_e
    - name: Exchange of L-tryptophan zwitterion.
    - metabolites: !!omap
      - trp__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_trp__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__GLUTRR
    - name: Glutamyl-tRNA reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__glutrna_c: -1.0
      - __Ecoli_panGEMs__trnaglu_c: 1.0
      - glu1sa_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01344
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLUTRR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLCP
    - name: Glycogen phosphorylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__glycogen_c: -1.0
      - g1p_c: 1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03792 or MNJNJBIH_03779
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLCP
      - sbo: SBO:0000176
  - !!omap
    - id: EX_din_e
    - name: Exchange of 2'-deoxyinosine.
    - metabolites: !!omap
      - din_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_din_e
      - sbo: SBO:0000627
  - !!omap
    - id: RBP4E
    - name: L-ribulose-phosphate 4-epimerase
    - metabolites: !!omap
      - ru5p__L_c: -1.0
      - xu5p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00088 or MNJNJBIH_04704 or MNJNJBIH_03984
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RBP4E
      - rhea: RHEA:22368
      - sbo: SBO:0000176
  - !!omap
    - id: NTD2
    - name: 5'-nucleotidase (UMP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - ump_c: -1.0
      - uri_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_04843 or MNJNJBIH_00726
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD2
      - rhea: RHEA:29359
      - sbo: SBO:0000176
  - !!omap
    - id: NTD4
    - name: 5'-nucleotidase (CMP)
    - metabolites: !!omap
      - cmp_c: -1.0
      - cytd_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_00726
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD4
      - rhea: RHEA:29367
      - sbo: SBO:0000176
  - !!omap
    - id: NTD5
    - name: 5'-nucleotidase (dTMP)
    - metabolites: !!omap
      - dtmp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - thymd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_04843 or MNJNJBIH_02493
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD5
      - rhea: RHEA:11080
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__fmn_e
    - name: FMN exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fmn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gthox_e
    - name: Exchange of glutathione disulfide(2-).
    - metabolites: !!omap
      - gthox_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gthox_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__KAS14
    - name: Beta-ketoacyl-ACP synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__acACP_c: -1.0
      - __Ecoli_panGEMs__actACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527 or MNJNJBIH_01232
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__KAS14
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__HEMEOS
    - name: Heme O synthase
    - metabolites: !!omap
      - frdp_c: -1.0
      - h2o_c: -1.0
      - hemeO_c: 1.0
      - pheme_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00470
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__HEMEOS
      - sbo: SBO:0000176
  - !!omap
    - id: ADMDC
    - name: adenosylmethionine decarboxylase
    - metabolites: !!omap
      - amet_c: -1.0
      - ametam_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00155
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ADMDC
      - sbo: SBO:0000176
  - !!omap
    - id: AGMT
    - name: agmatinase
    - metabolites: !!omap
      - agm_c: -1.0
      - h2o_c: -1.0
      - ptrc_c: 1.0
      - urea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03215
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: AGMT
      - rhea: RHEA:13929
      - sbo: SBO:0000176
  - !!omap
    - id: NTD6
    - name: 5'-nucleotidase (dAMP)
    - metabolites: !!omap
      - dad_2_c: 1.0
      - damp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_02493
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD6
      - rhea: RHEA:29371
      - sbo: SBO:0000176
  - !!omap
    - id: LGTHL
    - name: lactoylglutathione lyase
    - metabolites: !!omap
      - gthrd_c: -1.0
      - lgt__S_c: 1.0
      - mthgxl_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01782
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: LGTHL
      - rhea: RHEA:19069
      - sbo: SBO:0000176
  - !!omap
    - id: PYDXPP
    - name: Pyridoxal 5-phosphate phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - pydx5p_c: -1.0
      - pydx_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00491 or MNJNJBIH_04264 or MNJNJBIH_05040 or 
        MNJNJBIH_00726
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PYDXPP
      - rhea: RHEA:20533
      - sbo: SBO:0000176
  - !!omap
    - id: PDXPP
    - name: Pyridoxine 5-phosphate phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pdx5p_c: -1.0
      - pi_c: 1.0
      - pydxn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05040
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PDXPP
      - rhea: RHEA:25112
      - sbo: SBO:0000176
  - !!omap
    - id: ARGDC
    - name: arginine decarboxylase
    - metabolites: !!omap
      - agm_c: 1.0
      - arg__L_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04603
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ARGDC
      - rhea: RHEA:17641
      - sbo: SBO:0000176
  - !!omap
    - id: HACD6i
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)
    - metabolites: !!omap
      - 3htdcoa_c: 1.0
      - 3otdcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD6i
      - rhea: RHEA:31167
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH1
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)
    - metabolites: !!omap
      - 3hbcoa_c: -1.0
      - b2coa_c: 1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH1
      - rhea: RHEA:26558
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH2
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA)
    - metabolites: !!omap
      - 3hhcoa_c: -1.0
      - h2o_c: 1.0
      - hx2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH2
      - rhea: RHEA:30547
      - sbo: SBO:0000176
  - !!omap
    - id: ARGSS
    - name: argininosuccinate synthase
    - metabolites: !!omap
      - amp_c: 1.0
      - argsuc_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - citr__L_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03514
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ARGSS
      - rhea: RHEA:10932
      - sbo: SBO:0000176
  - !!omap
    - id: AGPR
    - name: N-acetyl-g-glutamyl-phosphate reductase
    - metabolites: !!omap
      - acg5p_c: 1.0
      - acg5sa_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04425
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: AGPR
      - rhea: RHEA:21588
      - sbo: SBO:0000176
  - !!omap
    - id: SPMS
    - name: spermidine synthase
    - metabolites: !!omap
      - 5mta_c: 1.0
      - ametam_c: -1.0
      - h_c: 1.0
      - ptrc_c: -1.0
      - spmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00156
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SPMS
      - rhea: RHEA:12721
      - sbo: SBO:0000176
  - !!omap
    - id: G1SAT
    - name: glutamate-1-semialdehyde aminotransferase
    - metabolites: !!omap
      - 5aop_c: 1.0
      - glu1sa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00193
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: G1SAT
      - rhea: RHEA:14265
      - sbo: SBO:0000176
  - !!omap
    - id: KDOCT2
    - name: 3-deoxy-manno-octulosonate cytidylyltransferase
    - metabolites: !!omap
      - ckdo_c: 1.0
      - ctp_c: -1.0
      - kdo_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01022
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: KDOCT2
      - rhea: RHEA:23448
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH3
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxyoctanoyl-CoA)
    - metabolites: !!omap
      - 3hocoa_c: -1.0
      - h2o_c: 1.0
      - oc2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH3
      - rhea: RHEA:31199
      - sbo: SBO:0000176
  - !!omap
    - id: UGLT
    - name: UDPglucose--hexose-1-phosphate uridylyltransferase
    - metabolites: !!omap
      - g1p_c: 1.0
      - gal1p_c: -1.0
      - udpg_c: -1.0
      - udpgal_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00828
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UGLT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EDTXS1
    - name: Endotoxin Synthesis (lauroyl transferase)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ddcaACP_c: -1.0
      - __Ecoli_panGEMs__kdo2lipid4L_c: 1.0
      - kdo2lipid4_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01187
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EDTXS1
      - sbo: SBO:0000176
  - !!omap
    - id: DXPS
    - name: 1-deoxy-D-xylulose 5-phosphate synthase
    - metabolites: !!omap
      - co2_c: 1.0
      - dxyl5p_c: 1.0
      - g3p_c: -1.0
      - h_c: -1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00462
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DXPS
      - sbo: SBO:0000176
  - !!omap
    - id: OAADC
    - name: oxaloacetate decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -1.0
      - oaa_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02001
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: OAADC
      - rhea: RHEA:15641
      - sbo: SBO:0000176
  - !!omap
    - id: MNNH
    - name: D-mannonate hydrolyase
    - metabolites: !!omap
      - 2ddglcn_c: 1.0
      - h2o_c: 1.0
      - mana_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04785
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MNNH
      - rhea: RHEA:20097
      - sbo: SBO:0000176
  - !!omap
    - id: CDPMEK
    - name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
    - metabolites: !!omap
      - 2p4c2me_c: 1.0
      - 4c2me_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01342
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CDPMEK
      - rhea: RHEA:18437
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EDTXS2
    - name: Endotoxin Synthesis (myristoyl transferase)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__kdo2lipid4L_c: -1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
      - lipa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02007
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EDTXS2
      - sbo: SBO:0000176
  - !!omap
    - id: MECDPS
    - name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
    - metabolites: !!omap
      - 2mecdp_c: 1.0
      - 2p4c2me_c: -1.0
      - cmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03004
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: MECDPS
      - rhea: RHEA:23864
      - sbo: SBO:0000176
  - !!omap
    - id: GUI1
    - name: glucuronate isomerase (D-glucuronate)
    - metabolites: !!omap
      - fruur_c: 1.0
      - glcur_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03422
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GUI1
      - rhea: RHEA:13049
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EDTXS3
    - name: Endotoxin Synthesis (palmitoleoyl ACP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdeACP_c: -1.0
      - __Ecoli_panGEMs__kdo2lipid4p_c: 1.0
      - kdo2lipid4_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02569
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EDTXS3
      - sbo: SBO:0000176
  - !!omap
    - id: PGAMT
    - name: phosphoglucosamine mutase
    - metabolites: !!omap
      - gam1p_c: -1.0
      - gam6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03519
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: PGAMT
      - sbo: SBO:0000176
  - !!omap
    - id: DDGLK
    - name: 2-dehydro-3-deoxygluconokinase
    - metabolites: !!omap
      - 2ddg6p_c: 1.0
      - 2ddglcn_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03915
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DDGLK
      - rhea: RHEA:14797
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EDTXS4
    - name: Endotoxin Synthesis (myristoyl transferase)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__kdo2lipid4p_c: -1.0
      - __Ecoli_panGEMs__lipa_cold_c: 1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02007
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EDTXS4
      - sbo: SBO:0000176
  - !!omap
    - id: XYLI2
    - name: xylose isomerase
    - metabolites: !!omap
      - fru_c: 1.0
      - glc__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03967
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: XYLI2
      - sbo: SBO:0000176
  - !!omap
    - id: PMANM
    - name: phosphomannomutase
    - metabolites: !!omap
      - man1p_c: -1.0
      - man6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02235
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PMANM
      - sbo: SBO:0000176
  - !!omap
    - id: ICL
    - name: Isocitrate lyase
    - metabolites: !!omap
      - glx_c: 1.0
      - icit_c: -1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04484
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: ICL
      - sbo: SBO:0000176
  - !!omap
    - id: UAGDP
    - name: UDP-N-acetylglucosamine diphosphorylase
    - metabolites: !!omap
      - acgam1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - uacgam_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04160
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAGDP
      - rhea: RHEA:13509
      - sbo: SBO:0000176
  - !!omap
    - id: UAGCVT_1
    - name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
    - metabolites: !!omap
      - pep_c: -1.0
      - pi_c: 1.0
      - uaccg_c: 1.0
      - uacgam_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03532
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAGCVT_1
      - rhea: RHEA:18681
      - sbo: SBO:0000176
  - !!omap
    - id: GLUR
    - name: glutamate racemase
    - metabolites: !!omap
      - glu__D_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04435
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: GLUR
      - rhea: RHEA:12813
      - sbo: SBO:0000176
  - !!omap
    - id: EX_tmao_e
    - name: Exchange of trimethylamine N-oxide.
    - metabolites: !!omap
      - tmao_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tmao_e
      - sbo: SBO:0000627
  - !!omap
    - id: UAG2E
    - name: UDP-N-acetylglucosamine 2-epimerase
    - metabolites: !!omap
      - uacgam_c: -1.0
      - uacmam_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04215
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAG2E
      - rhea: RHEA:17213
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acald_e
    - name: Exchange of acetaldehyde.
    - metabolites: !!omap
      - acald_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acald_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLYCL
    - name: Glycine Cleavage System
    - metabolites: !!omap
      - co2_c: 1.0
      - gly_c: -1.0
      - mlthf_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - nh4_c: 1.0
      - thf_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03179 and MNJNJBIH_03178 and MNJNJBIH_00147 
        and MNJNJBIH_03180
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: GLYCL
      - rhea: RHEA:27758
      - sbo: SBO:0000176
  - !!omap
    - id: CMPN
    - name: CMP nucleosidase
    - metabolites: !!omap
      - cmp_c: -1.0
      - csn_c: 1.0
      - h2o_c: -1.0
      - r5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CMPN
      - rhea: RHEA:30075
      - sbo: SBO:0000176
  - !!omap
    - id: NNDPR
    - name: nicotinate-nucleotide diphosphorylase (carboxylating)
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -2.0
      - nicrnt_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
      - quln_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00140
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NNDPR
      - rhea: RHEA:12733
      - sbo: SBO:0000176
  - !!omap
    - id: EX_melib_e
    - name: Exchange of melibiose.
    - metabolites: !!omap
      - melib_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_melib_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MACPD
    - name: Malonyl-ACP decarboxylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__acACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MACPD
      - sbo: SBO:0000176
  - !!omap
    - id: DMQMT
    - name: 3-Dimethylubiquinonol 3-methyltransferase
    - metabolites: !!omap
      - 2omhmbl_c: -1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02426
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DMQMT
      - sbo: SBO:0000176
  - !!omap
    - id: UDPG4E
    - name: UDPglucose 4-epimerase
    - metabolites: !!omap
      - udpg_c: -1.0
      - udpgal_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00829
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UDPG4E
      - rhea: RHEA:22168
      - sbo: SBO:0000176
  - !!omap
    - id: TRE6PH
    - name: trehalose-6-phosphate hydrolase
    - metabolites: !!omap
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - tre6p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04749
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TRE6PH
      - rhea: RHEA:23008
      - sbo: SBO:0000176
  - !!omap
    - id: XYLI1
    - name: xylose isomerase
    - metabolites: !!omap
      - xyl__D_c: -1.0
      - xylu__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03967
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: XYLI1
      - sbo: SBO:0000176
  - !!omap
    - id: ICHORS:2
    - name: isochorismate synthase
    - metabolites: !!omap
      - chor_c: -1.0
      - ichor_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00638
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ICHORS
      - rhea: RHEA:18985
      - sbo: SBO:0000176
  - !!omap
    - id: EX_sucr_e
    - name: Exchange of sucrose.
    - metabolites: !!omap
      - sucr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sucr_e
      - sbo: SBO:0000627
  - !!omap
    - id: ALDD4
    - name: aldehyde dehydrogenase (butanal, NAD)
    - metabolites: !!omap
      - btal_c: -1.0
      - but_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALDD4
      - rhea: RHEA:69088
      - sbo: SBO:0000176
  - !!omap
    - id: HACD4
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
    - metabolites: !!omap
      - 3hdcoa_c: 1.0
      - 3odcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD4
      - rhea: RHEA:31187
      - sbo: SBO:0000176
  - !!omap
    - id: G3PT
    - name: glycerol-3-phosphatase
    - metabolites: !!omap
      - glyc3p_c: -1.0
      - glyc_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00909 or MNJNJBIH_00726
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: G3PT
      - rhea: RHEA:66372
      - sbo: SBO:0000176
  - !!omap
    - id: CINNDO
    - name: Cinnamate dioxygenase
    - metabolites: !!omap
      - cenchddd_c: 1.0
      - cinnm_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02770 and MNJNJBIH_02765 and MNJNJBIH_02767 
        and MNJNJBIH_02766
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: CINNDO
      - rhea: RHEA:25058
      - sbo: SBO:0000176
  - !!omap
    - id: DHPPD
    - name: 2,3-dihydroxyphenylpropionate dehydrogenase
    - metabolites: !!omap
      - cechddd_c: -1.0
      - dhpppn_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02769
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DHPPD
      - rhea: RHEA:25062
      - sbo: SBO:0000176
  - !!omap
    - id: EX_tre_e
    - name: Exchange of alpha,alpha-trehalose.
    - metabolites: !!omap
      - tre_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tre_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_zn2_e
    - name: Exchange of zinc(2+).
    - metabolites: !!omap
      - zn2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_zn2_e
      - sbo: SBO:0000627
  - !!omap
    - id: HACD5
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)
    - metabolites: !!omap
      - 3hddcoa_c: 1.0
      - 3oddcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD5
      - rhea: RHEA:31179
      - sbo: SBO:0000176
  - !!omap
    - id: DHCIND
    - name: 2,3-dihydroxycinnamate dehydrogenase
    - metabolites: !!omap
      - 34dhcinm_c: 1.0
      - cenchddd_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02769
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DHCIND
      - sbo: SBO:0000176
  - !!omap
    - id: HACD7
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
    - metabolites: !!omap
      - 3hhdcoa_c: 1.0
      - 3ohdcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD7
      - rhea: RHEA:31159
      - sbo: SBO:0000176
  - !!omap
    - id: GOFUCR
    - name: GDP-4-oxo-L-fucose reductase
    - metabolites: !!omap
      - gdpfuc_c: 1.0
      - gdpofuc_c:-2: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02239
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: GOFUCR
      - rhea: RHEA:18885
      - sbo: SBO:0000176
  - !!omap
    - id: PYDXK_1
    - name: pyridoxal kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pydx5p_c: 1.0
      - pydx_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02620 or MNJNJBIH_01767
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PYDXK_1
      - rhea: RHEA:10224
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DNMPPA
    - name: Dihydroneopterin monophosphate dephosphorylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dhnpt_c: 1.0
      - dhpmp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DNMPPA
      - sbo: SBO:0000176
  - !!omap
    - id: HPPK_1
    - name: 6-hydroxymethyl-dihydropterin pyrophosphokinase
    - metabolites: !!omap
      - 2ahhmd_c: 1.0
      - 2ahhmp_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00179
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: HPPK_1
      - sbo: SBO:0000176
  - !!omap
    - id: PTPATi
    - name: pantetheine-phosphate adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - dpcoa_c: 1.0
      - h_c: -1.0
      - pan4p_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04044
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PTPATi
      - rhea: RHEA:19801
      - sbo: SBO:0000176
  - !!omap
    - id: HEX7
    - name: hexokinase (D-fructose:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - f6p_c: 1.0
      - fru_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00436
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HEX7
      - sbo: SBO:0000176
  - !!omap
    - id: DXPRIi
    - name: 1-deoxy-D-xylulose reductoisomerase
    - metabolites: !!omap
      - 2me4p_c: 1.0
      - dxyl5p_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00214
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DXPRIi
      - rhea: RHEA:13717
      - sbo: SBO:0000176
  - !!omap
    - id: GTPCII2
    - name: GTP cyclohydrolase II (25drapp)
    - metabolites: !!omap
      - 25drapp_c: 1.0
      - for_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -3.0
      - h_c: 2.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01430
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GTPCII2
      - sbo: SBO:0000176
  - !!omap
    - id: URIC
    - name: uricase
    - metabolites: !!omap
      - alltn_c: 1.0
      - co2_c: 1.0
      - h2o2_c: 1.0
      - h2o_c: -2.0
      - o2_c: -1.0
      - urate_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: URIC
      - sbo: SBO:0000176
  - !!omap
    - id: SADT2
    - name: Sulfate adenyltransferase
    - metabolites: !!omap
      - aps_c: 1.0
      - atp_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - ppi_c: 1.0
      - so4_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03011 and MNJNJBIH_03010
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: SADT2
      - sbo: SBO:0000176
  - !!omap
    - id: OPHBDC
    - name: Octaprenyl-hydroxybenzoate decarboxylase
    - metabolites: !!omap
      - 2oph_c: 1.0
      - 3ophb_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02513
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OPHBDC
      - rhea: RHEA:27778
      - sbo: SBO:0000176
  - !!omap
    - id: OHPHM
    - name: 2-octaprenyl-6-hydroxyphenol methylase
    - metabolites: !!omap
      - 2ohph_c: -1.0
      - 2omph_c: 1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02426
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OHPHM
      - sbo: SBO:0000176
  - !!omap
    - id: GHMT2r
    - name: glycine hydroxymethyltransferase, reversible
    - metabolites: !!omap
      - gly_c: 1.0
      - h2o_c: 1.0
      - mlthf_c: 1.0
      - ser__L_c: -1.0
      - thf_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02786
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: GHMT2r
      - rhea: RHEA:15481
      - sbo: SBO:0000176
  - !!omap
    - id: DHORD2
    - name: dihydoorotic acid dehydrogenase (quinone8)
    - metabolites: !!omap
      - dhor__S_c: -1.0
      - orot_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01057
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: DHORD2
      - rhea: RHEA:28687
      - sbo: SBO:0000176
  - !!omap
    - id: LCARS
    - name: lacaldehyde reductase (S-propane-1,2-diol forming)
    - metabolites: !!omap
      - 12ppd__S_c: 1.0
      - h_c: -1.0
      - lald__L_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03054
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LCARS
      - rhea: RHEA:15933
      - sbo: SBO:0000176
  - !!omap
    - id: ALCD19
    - name: alcohol dehydrogenase (glycerol)
    - metabolites: !!omap
      - glyald_c: -1.0
      - glyc_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01626 or MNJNJBIH_01378
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALCD19
      - rhea: RHEA:30027
      - sbo: SBO:0000176
  - !!omap
    - id: RMPA
    - name: Rhamnulose-1-phosphate aldolase
    - metabolites: !!omap
      - dhap_c: 1.0
      - lald__L_c: 1.0
      - rml1p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04353
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RMPA
      - rhea: RHEA:19689
      - sbo: SBO:0000176
  - !!omap
    - id: SBTPD
    - name: sorbitol-6-phosphate dehydrogenase
    - metabolites: !!omap
      - f6p_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - sbt6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02943
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: SBTPD
      - rhea: RHEA:19837
      - sbo: SBO:0000176
  - !!omap
    - id: T6PK
    - name: Phosphofructokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - tag6p__D_c: -1.0
      - tagdp__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04368
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: T6PK
      - sbo: SBO:0000176
  - !!omap
    - id: GLTPD
    - name: Galactitol-1-phosphate dehydrogenase
    - metabolites: !!omap
      - galt1p_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - tag6p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05610
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLTPD
      - sbo: SBO:0000176
  - !!omap
    - id: EX_hdcea_e
    - name: Exchange of palmitoleate.
    - metabolites: !!omap
      - hdcea_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hdcea_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACACCT
    - name: acetyl-CoA:acetoacetyl-CoA transferase
    - metabolites: !!omap
      - aacoa_c: 1.0
      - ac_c: 1.0
      - acac_c: -1.0
      - accoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02417 and MNJNJBIH_02416) or MNJNJBIH_01833
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ACACCT
      - rhea: RHEA:27806
      - sbo: SBO:0000176
  - !!omap
    - id: SDPDS
    - name: succinyl-diaminopimelate desuccinylase
    - metabolites: !!omap
      - 26dap_LL_c: 1.0
      - h2o_c: -1.0
      - sl26da_c: -1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02678
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: SDPDS
      - rhea: RHEA:22608
      - sbo: SBO:0000176
  - !!omap
    - id: BUTCT
    - name: Acetyl-CoA:butyrate-CoA transferase
    - metabolites: !!omap
      - ac_c: 1.0
      - accoa_c: -1.0
      - btcoa_c: 1.0
      - but_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02417 and MNJNJBIH_02416
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: BUTCT
      - rhea: RHEA:30071
      - sbo: SBO:0000176
  - !!omap
    - id: TGBPA
    - name: Tagatose-bisphosphate aldolase
    - metabolites: !!omap
      - dhap_c: 1.0
      - g3p_c: 1.0
      - tagdp__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_03461 and MNJNJBIH_03469) or (MNJNJBIH_05605
        and MNJNJBIH_05604)
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TGBPA
      - sbo: SBO:0000176
  - !!omap
    - id: TAGURr
    - name: tagaturonate reductase
    - metabolites: !!omap
      - altrn_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - tagur_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01674
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TAGURr
      - rhea: RHEA:17813
      - sbo: SBO:0000176
  - !!omap
    - id: DMSOR1
    - name: Dimethyl sulfoxide reductase (Menaquinol 8)
    - metabolites: !!omap
      - dms_c: 1.0
      - dmso_c: -1.0
      - h2o_c: 1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01714 and MNJNJBIH_01715 and MNJNJBIH_01713 
        and MNJNJBIH_01712) or ((MNJNJBIH_00999 and MNJNJBIH_01000 and 
        MNJNJBIH_00998) and MNJNJBIH_00997) or MNJNJBIH_00997
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: DMSOR1
      - rhea: RHEA:29203
      - sbo: SBO:0000176
  - !!omap
    - id: PGLYCP
    - name: Phosphoglycolate phosphatase
    - metabolites: !!omap
      - 2pglyc_c: -1.0
      - glyclt_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03742
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PGLYCP
      - rhea: RHEA:14369
      - sbo: SBO:0000176
  - !!omap
    - id: 2DGULRx
    - name: 2-dehydro-L-gulonate reductase (NADH)
    - metabolites: !!omap
      - 2dhguln_c: -1.0
      - h_c: -1.0
      - idon__L_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2DGULRx
      - rhea: RHEA:27818
      - sbo: SBO:0000176
  - !!omap
    - id: DKGLCNR2y
    - name: 2,5-diketo-D-gluconate reductase (NADPH)
    - metabolites: !!omap
      - 25dkglcn_c: -1.0
      - 5dglcn_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DKGLCNR2y
      - rhea: RHEA:27634
      - sbo: SBO:0000176
  - !!omap
    - id: G1PTT
    - name: glucose-1-phosphate thymidylyltransferase
    - metabolites: !!omap
      - dtdpglu_c: 1.0
      - dttp_c: -1.0
      - g1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04218
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: G1PTT
      - sbo: SBO:0000176
  - !!omap
    - id: TDPGDH
    - name: dTDPglucose 4,6-dehydratase
    - metabolites: !!omap
      - dtdp4d6dg_c: 1.0
      - dtdpglu_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04217
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: TDPGDH
      - rhea: RHEA:17221
      - sbo: SBO:0000176
  - !!omap
    - id: ADCS
    - name: 4-amino-4-deoxychorismate synthase
    - metabolites: !!omap
      - 4adcho_c: 1.0
      - chor_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01959 and MNJNJBIH_03712
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ADCS
      - rhea: RHEA:11672
      - sbo: SBO:0000176
  - !!omap
    - id: ADCL
    - name: 4-aminobenzoate synthase
    - metabolites: !!omap
      - 4abz_c: 1.0
      - 4adcho_c: -1.0
      - h_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01233 or MNJNJBIH_04525
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ADCL
      - rhea: RHEA:16201
      - sbo: SBO:0000176
  - !!omap
    - id: 2DGULRy
    - name: 2-dehydro-L-gulonate reductase (NADPH)
    - metabolites: !!omap
      - 2dhguln_c: -1.0
      - h_c: -1.0
      - idon__L_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2DGULRy
      - rhea: RHEA:29839
      - sbo: SBO:0000176
  - !!omap
    - id: DHAPT
    - name: Dihydroxyacetone phosphotransferase
    - metabolites: !!omap
      - dha_c: -1.0
      - dhap_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01332 and MNJNJBIH_01330 and MNJNJBIH_02618 
        and MNJNJBIH_02617 and MNJNJBIH_01331
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DHAPT
      - rhea: RHEA:18381
      - sbo: SBO:0000176
  - !!omap
    - id: EX_lac__D_e
    - name: Exchange of (R)-lactate.
    - metabolites: !!omap
      - lac__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lac__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: UMPK
    - name: UMP kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - udp_c: 1.0
      - ump_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01014 or MNJNJBIH_00212
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: UMPK
      - rhea: RHEA:24400
      - sbo: SBO:0000176
  - !!omap
    - id: RZ5PP
    - name: alpha-ribazole 5-phosphate phosphatase
    - metabolites: !!omap
      - 5prdmbz_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - rdmbzi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00691
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: RZ5PP
      - rhea: RHEA:24456
      - sbo: SBO:0000176
  - !!omap
    - id: DURIK1
    - name: deoxyuridine kinase (ATP:Deoxyuridine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dump_c: 1.0
      - duri_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01375
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DURIK1
      - rhea: RHEA:28206
      - sbo: SBO:0000176
  - !!omap
    - id: ALLTN
    - name: allantoinase
    - metabolites: !!omap
      - alltn_c: -1.0
      - alltt_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00565
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: ALLTN
      - sbo: SBO:0000176
  - !!omap
    - id: UAPGR
    - name: UDP-N-acetylenolpyruvoylglucosamine reductase
    - metabolites: !!omap
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - uaccg_c: -1.0
      - uamr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04438
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAPGR
      - rhea: RHEA:12248
      - sbo: SBO:0000176
  - !!omap
    - id: UPPRT
    - name: uracil phosphoribosyltransferase
    - metabolites: !!omap
      - ppi_c: 1.0
      - prpp_c: -1.0
      - ump_c: 1.0
      - ura_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02711
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: UPPRT
      - rhea: RHEA:13017
      - sbo: SBO:0000176
  - !!omap
    - id: NTD9
    - name: 5'-nucleotidase (GMP)
    - metabolites: !!omap
      - gmp_c: -1.0
      - gsn_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_03760 or MNJNJBIH_00726
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD9
      - rhea: RHEA:27714
      - sbo: SBO:0000176
  - !!omap
    - id: CTPS2
    - name: CTP synthase (glutamine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ctp_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03035
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: CTPS2
      - rhea: RHEA:26426
      - sbo: SBO:0000176
  - !!omap
    - id: NTD1
    - name: 5'-nucleotidase (dUMP)
    - metabolites: !!omap
      - dump_c: -1.0
      - duri_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_04843 or MNJNJBIH_02493
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD1
      - rhea: RHEA:29355
      - sbo: SBO:0000176
  - !!omap
    - id: NTD7
    - name: 5'-nucleotidase (AMP)
    - metabolites: !!omap
      - adn_c: 1.0
      - amp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_03760 or MNJNJBIH_00726
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD7
      - rhea: RHEA:29375
      - sbo: SBO:0000176
  - !!omap
    - id: PAPPT3
    - name: phospho-N-acetylmuramoyl-pentapeptide-transferase 
        (meso-2,6-diaminopimelate)
    - metabolites: !!omap
      - uagmda_c: 1.0
      - udcpp_c: -1.0
      - ugmda_c: -1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00117
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: PAPPT3
      - rhea: RHEA:28386
      - sbo: SBO:0000176
  - !!omap
    - id: UAGPT3
    - name: 
        UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol
        N-acetylglucosamine transferase
    - metabolites: !!omap
      - h_c: 1.0
      - uaagmda_c: 1.0
      - uacgam_c: -1.0
      - uagmda_c: -1.0
      - udp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00120
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAGPT3
      - rhea: RHEA:31227
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK7
    - name: nucleoside-diphosphate kinase (ATP:dCDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dcdp_c: -1.0
      - dctp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK7
      - rhea: RHEA:27678
      - sbo: SBO:0000176
  - !!omap
    - id: ADNUC
    - name: adenosine hydrolase
    - metabolites: !!omap
      - ade_c: 1.0
      - adn_c: -1.0
      - h2o_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00047
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ADNUC
      - rhea: RHEA:18669
      - sbo: SBO:0000176
  - !!omap
    - id: GMHEPPA
    - name: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase
    - metabolites: !!omap
      - gmhep17bp_c: -1.0
      - gmhep1p_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00243
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: GMHEPPA
      - rhea: RHEA:28518
      - sbo: SBO:0000176
  - !!omap
    - id: S7PI
    - name: sedoheptulose 7-phosphate isomerase
    - metabolites: !!omap
      - gmhep7p_c: 1.0
      - s7p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00269
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: S7PI
      - sbo: SBO:0000176
  - !!omap
    - id: TRPS3
    - name: tryptophan synthase (indoleglycerol phosphate)
    - metabolites: !!omap
      - 3ig3p_c: -1.0
      - g3p_c: 1.0
      - indole_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01406 and MNJNJBIH_01407
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: TRPS3
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ttdcea_e
    - name: Exchange of myristoleate.
    - metabolites: !!omap
      - ttdcea_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ttdcea_e
      - sbo: SBO:0000627
  - !!omap
    - id: F6PA
    - name: fructose 6-phosphate aldolase
    - metabolites: !!omap
      - dha_c: 1.0
      - f6p_c: -1.0
      - g3p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00916 or MNJNJBIH_04407
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: F6PA
      - sbo: SBO:0000176
  - !!omap
    - id: AGMHE
    - name: ADP-D-glycero-D-manno-heptose epimerase
    - metabolites: !!omap
      - adphep_DD_c: -1.0
      - adphep_LD_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04028
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: AGMHE
      - rhea: RHEA:17577
      - sbo: SBO:0000176
  - !!omap
    - id: CRNBTCT
    - name: 'gamma-butyrobetainyl-CoA: carnitine CoA transferase'
    - metabolites: !!omap
      - bbtcoa_c: -1.0
      - crn_c: -1.0
      - crncoa_c: 1.0
      - gbbtn_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00061
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CRNBTCT
      - rhea: RHEA:28418
      - sbo: SBO:0000176
  - !!omap
    - id: CRNCBCT
    - name: 'crotonobetainyl-CoA: carnitine CoA transferase'
    - metabolites: !!omap
      - crn_c: -1.0
      - crncoa_c: 1.0
      - ctbt_c: 1.0
      - ctbtcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00061
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CRNCBCT
      - rhea: RHEA:28526
      - sbo: SBO:0000176
  - !!omap
    - id: NTD10
    - name: 5'-nucleotidase (XMP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - xmp_c: -1.0
      - xtsn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD10
      - rhea: RHEA:28530
      - sbo: SBO:0000176
  - !!omap
    - id: CRNCDH
    - name: Carnityl-CoA dehydratse
    - metabolites: !!omap
      - crncoa_c: -1.0
      - ctbtcoa_c: 1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00059
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CRNCDH
      - rhea: RHEA:28338
      - sbo: SBO:0000176
  - !!omap
    - id: GMHEPAT
    - name: D-glycero-D-manno-hepose 1-phosphate adenyltransferase
    - metabolites: !!omap
      - adphep_DD_c: 1.0
      - atp_c: -1.0
      - gmhep1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03365
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: GMHEPAT
      - rhea: RHEA:27465
      - sbo: SBO:0000176
  - !!omap
    - id: EX_h2s_e
    - name: Hydrogen sulfide exchange
    - metabolites: !!omap
      - h2s_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2s_e
      - sbo: SBO:0000627
  - !!omap
    - id: ADPT
    - name: adenine phosphoribosyltransferase
    - metabolites: !!omap
      - ade_c: -1.0
      - amp_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00517
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADPT
      - rhea: RHEA:16609
      - sbo: SBO:0000176
  - !!omap
    - id: EX_gthrd_e
    - name: Exchange of glutathionate(1-).
    - metabolites: !!omap
      - gthrd_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gthrd_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__FADRx
    - name: FAD reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04282
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FADRx
      - sbo: SBO:0000176
  - !!omap
    - id: GTPDPK
    - name: GTP diphosphokinase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - gdptp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03039
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GTPDPK:2
      - rhea: RHEA:22088
      - sbo: SBO:0000176
  - !!omap
    - id: NADN
    - name: NAD nucleosidase
    - metabolites: !!omap
      - adprib_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - ncam_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NADN
      - rhea: RHEA:16301
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCLTDx
    - name: Glycolate dehydrogenase (NAD)
    - metabolites: !!omap
      - glx_c: -1.0
      - glyclt_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952 or MNJNJBIH_01164
    - subsystem: Glyoxylate Metabolism
    - annotation: !!omap
      - biggr: GLYCLTDx
      - rhea: RHEA:18229
      - sbo: SBO:0000176
  - !!omap
    - id: ADK1
    - name: adenylate kinase
    - metabolites: !!omap
      - adp_c: 2.0
      - amp_c: -1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADK1
      - rhea: RHEA:12973
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK2
    - name: nucleoside-diphosphate kinase (ATP:UDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - udp_c: -1.0
      - utp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK2
      - rhea: RHEA:25098
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK3
    - name: nucleoside-diphosphate kinase (ATP:CDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cdp_c: -1.0
      - ctp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02736 or MNJNJBIH_00523
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK3
      - rhea: RHEA:25237
      - sbo: SBO:0000176
  - !!omap
    - id: HPYRRy
    - name: Hydroxypyruvate reductase (NADPH)
    - metabolites: !!omap
      - glyc__R_c: 1.0
      - h_c: -1.0
      - hpyr_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01164 or MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HPYRRy
      - rhea: RHEA:18657
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK4
    - name: nucleoside-diphosphate kinase (ATP:dTDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dtdp_c: -1.0
      - dttp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK4
      - rhea: RHEA:27682
      - sbo: SBO:0000176
  - !!omap
    - id: ACODA
    - name: acetylornithine deacetylase
    - metabolites: !!omap
      - ac_c: 1.0
      - acorn_c: -1.0
      - h2o_c: -1.0
      - orn__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04424
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ACODA
      - rhea: RHEA:15941
      - sbo: SBO:0000176
  - !!omap
    - id: ADA
    - name: Adenosine deaminase
    - metabolites: !!omap
      - adn_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - ins_c: 1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01749
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADA
      - rhea: RHEA:24408
      - sbo: SBO:0000176
  - !!omap
    - id: DADA
    - name: Deoxyadenosine deaminase
    - metabolites: !!omap
      - dad_2_c: -1.0
      - din_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01749
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DADA
      - rhea: RHEA:28190
      - sbo: SBO:0000176
  - !!omap
    - id: ADD
    - name: adenine deaminase
    - metabolites: !!omap
      - ade_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - hxan_c: 1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04088
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADD
      - rhea: RHEA:23688
      - sbo: SBO:0000176
  - !!omap
    - id: FCLT
    - name: Ferrochelatase
    - metabolites: !!omap
      - fe2_c: -1.0
      - h_c: 2.0
      - pheme_c: 1.0
      - ppp9_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00524 or MNJNJBIH_02635 or MNJNJBIH_01149
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: FCLT
      - rhea: RHEA:22584
      - sbo: SBO:0000176
  - !!omap
    - id: HBZOPT
    - name: Hydroxybenzoate octaprenyltransferase
    - metabolites: !!omap
      - 3ophb_c: 1.0
      - 4hbz_c: -1.0
      - octdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04527
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: HBZOPT
      - rhea: RHEA:27782
      - sbo: SBO:0000176
  - !!omap
    - id: PNTK
    - name: pantothenate kinase
    - metabolites: !!omap
      - 4ppan_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pnto__R_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04440
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PNTK
      - rhea: RHEA:16373
      - sbo: SBO:0000176
  - !!omap
    - id: ADSS
    - name: adenylosuccinate synthase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - dcamp_c: 1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 2.0
      - imp_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04678
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: ADSS
      - rhea: RHEA:15753
      - sbo: SBO:0000176
  - !!omap
    - id: AGDC
    - name: N-acetylglucosamine-6-phosphate deacetylase
    - metabolites: !!omap
      - ac_c: 1.0
      - acgam6p_c: -1.0
      - gam6p_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00728
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: AGDC
      - sbo: SBO:0000176
  - !!omap
    - id: OCTDPS
    - name: Octaprenyl pyrophosphate synthase
    - metabolites: !!omap
      - frdp_c: -1.0
      - ipdp_c: -5.0
      - octdp_c: 1.0
      - ppi_c: 5.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03530
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OCTDPS
      - rhea: RHEA:27798
      - sbo: SBO:0000176
  - !!omap
    - id: ASNN
    - name: L-asparaginase
    - metabolites: !!omap
      - asn__L_c: -1.0
      - asp__L_c: 1.0
      - h2o_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01911 or MNJNJBIH_00919
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ASNN
      - rhea: RHEA:21016
      - sbo: SBO:0000176
  - !!omap
    - id: DPCOAK
    - name: dephospho-CoA kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: 1.0
      - dpcoa_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00135
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DPCOAK
      - rhea: RHEA:18245
      - sbo: SBO:0000176
  - !!omap
    - id: HETZK_1
    - name: hydroxyethylthiazole kinase
    - metabolites: !!omap
      - 4mhetz_c: -1.0
      - 4mpetz_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02290
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: HETZK_1
      - rhea: RHEA:24212
      - sbo: SBO:0000176
  - !!omap
    - id: ASNS2
    - name: asparagine synthetase
    - metabolites: !!omap
      - amp_c: 1.0
      - asn__L_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - nh4_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04174 or MNJNJBIH_00724
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ASNS2
      - rhea: RHEA:11372
      - sbo: SBO:0000176
  - !!omap
    - id: ASPCT_1
    - name: aspartate carbamoyltransferase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - cbasp_c: 1.0
      - cbp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04755 and MNJNJBIH_04756) or MNJNJBIH_04756
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: ASPCT_1
      - rhea: RHEA:20013
      - sbo: SBO:0000176
  - !!omap
    - id: KDOPP
    - name: 3-deoxy-manno-octulosonate-8-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - kdo8p_c: -1.0
      - kdo_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03543
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: KDOPP
      - rhea: RHEA:11500
      - sbo: SBO:0000176
  - !!omap
    - id: DMPPS
    - name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)
    - metabolites: !!omap
      - dmpp_c: 1.0
      - h2mb4p_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00045
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DMPPS
      - sbo: SBO:0000176
  - !!omap
    - id: EX_26dap__M_e
    - name: Exchange of meso-2,6-diaminopimelic acid dizwitterion.
    - metabolites: !!omap
      - 26dap__M_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_26dap__M_e
      - sbo: SBO:0000627
  - !!omap
    - id: IPDPS
    - name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp)
    - metabolites: !!omap
      - h2mb4p_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - ipdp_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00045
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: IPDPS
      - sbo: SBO:0000176
  - !!omap
    - id: AST
    - name: Arginine succinyltransferase
    - metabolites: !!omap
      - arg__L_c: -1.0
      - coa_c: 1.0
      - h_c: 1.0
      - sucarg_c: 1.0
      - succoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01889
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: AST
      - rhea: RHEA:15185
      - sbo: SBO:0000176
  - !!omap
    - id: SGDS
    - name: Succinylglutamate desuccinylase
    - metabolites: !!omap
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - succ_c: 1.0
      - sucglu_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01887
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SGDS
      - rhea: RHEA:15169
      - sbo: SBO:0000176
  - !!omap
    - id: CYNTAH
    - name: Cyanate aminohydrolase
    - metabolites: !!omap
      - co2_c: 2.0
      - cynt_c: -1.0
      - h2co3_c: -1.0
      - h_c: -3.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00374
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: CYNTAH:2
      - sbo: SBO:0000176
  - !!omap
    - id: DAPE
    - name: diaminopimelate epimerase
    - metabolites: !!omap
      - 26dap_LL_c: -1.0
      - 26dap__M_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04240
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: DAPE
      - rhea: RHEA:15393
      - sbo: SBO:0000176
  - !!omap
    - id: DHDPRy
    - name: dihydrodipicolinate reductase (NADPH)
    - metabolites: !!omap
      - 23dhdp_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - thdp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00049
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: DHDPRy
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acnam_e
    - name: Exchange of N-acetyl-beta-neuraminate.
    - metabolites: !!omap
      - acnam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acnam_e
      - sbo: SBO:0000627
  - !!omap
    - id: HSK
    - name: homoserine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - hom__L_c: -1.0
      - phom_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00014
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: HSK
      - rhea: RHEA:13985
      - sbo: SBO:0000176
  - !!omap
    - id: SDPTA
    - name: succinyldiaminopimelate transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - glu__L_c: 1.0
      - sl26da_c: -1.0
      - sl2a6o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03711 or MNJNJBIH_01890 or MNJNJBIH_02898 or 
        MNJNJBIH_01011
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: SDPTA
      - rhea: RHEA:11960
      - sbo: SBO:0000176
  - !!omap
    - id: GSPMDA
    - name: Glutathionylspermidine amidase
    - metabolites: !!omap
      - gthrd_c: 1.0
      - gtspmd_c: -1.0
      - h2o_c: -1.0
      - spmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03300
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: GSPMDA
      - rhea: RHEA:17173
      - sbo: SBO:0000176
  - !!omap
    - id: GSPMDS
    - name: Glutathionylspermidine synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gthrd_c: -1.0
      - gtspmd_c: 1.0
      - h_c: 1.0
      - pi_c: 1.0
      - spmd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03300
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: GSPMDS
      - rhea: RHEA:21272
      - sbo: SBO:0000176
  - !!omap
    - id: GUAD_1
    - name: guanine deaminase
    - metabolites: !!omap
      - gua_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
      - xan_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03156
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GUAD_1
      - sbo: SBO:0000176
  - !!omap
    - id: THRS_2
    - name: threonine synthase
    - metabolites: !!omap
      - h2o_c: -1.0
      - phom_c: -1.0
      - pi_c: 1.0
      - thr__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00015
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: THRS_2
      - rhea: RHEA:10840
      - sbo: SBO:0000176
  - !!omap
    - id: EX_amp_e
    - name: Exchange of adenosine 5'-monophosphate(2-).
    - metabolites: !!omap
      - amp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_amp_e
      - sbo: SBO:0000627
  - !!omap
    - id: HSST
    - name: homoserine O-succinyltransferase
    - metabolites: !!omap
      - coa_c: 1.0
      - hom__L_c: -1.0
      - succoa_c: -1.0
      - suchms_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04482
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: HSST
      - rhea: RHEA:22008
      - sbo: SBO:0000176
  - !!omap
    - id: PPNDH
    - name: prephenate dehydratase
    - metabolites: !!omap
      - co2_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - phpyr_c: 1.0
      - pphn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02845
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: PPNDH
      - sbo: SBO:0000176
  - !!omap
    - id: TMAOR1
    - name: Trimethylamine N-oxide reductase (menaquinol 8)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - tmam_c: 1.0
      - tmao_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00999 and MNJNJBIH_01000 and MNJNJBIH_00998)
        or (MNJNJBIH_01714 and MNJNJBIH_01715 and MNJNJBIH_01713 and 
        MNJNJBIH_01712)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: TMAOR1
      - rhea: RHEA:29279
      - sbo: SBO:0000176
  - !!omap
    - id: TMAOR2
    - name: Trimethylamine N-oxide reductase (demethylmenaquinol 8)
    - metabolites: !!omap
      - 2dmmq8_c: 1.0
      - 2dmmql8_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - tmam_c: 1.0
      - tmao_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00999 and MNJNJBIH_01000 and MNJNJBIH_00998
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: TMAOR2
      - rhea: RHEA:30583
      - sbo: SBO:0000176
  - !!omap
    - id: DGK1
    - name: deoxyguanylate kinase (dGMP:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dgdp_c: 1.0
      - dgmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04059
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DGK1
      - rhea: RHEA:12697
      - sbo: SBO:0000176
  - !!omap
    - id: DTMPK
    - name: dTMP kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dtdp_c: 1.0
      - dtmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01235
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DTMPK
      - rhea: RHEA:13517
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK1
    - name: nucleoside-diphosphate kinase (ATP:GDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gdp_c: -1.0
      - gtp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523 or MNJNJBIH_02736
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NDPK1
      - rhea: RHEA:27686
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__TRDR
    - name: Thioredoxin reductase (NADPH)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: -1.0
      - __Ecoli_panGEMs__trdrd_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00988 and MNJNJBIH_04210) or (MNJNJBIH_02826
        and MNJNJBIH_00988)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TRDR
      - sbo: SBO:0000176
  - !!omap
    - id: DDPA
    - name: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
    - metabolites: !!omap
      - 2dda7p_c: 1.0
      - e4p_c: -1.0
      - h2o_c: -1.0
      - pep_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02847 or MNJNJBIH_00823 or MNJNJBIH_01844
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: DDPA
      - rhea: RHEA:14717
      - sbo: SBO:0000176
  - !!omap
    - id: NNAM
    - name: nicotinamidase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nac_c: 1.0
      - ncam_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01912
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NNAM
      - rhea: RHEA:14545
      - sbo: SBO:0000176
  - !!omap
    - id: PGMT
    - name: phosphoglucomutase
    - metabolites: !!omap
      - g1p_c: -1.0
      - g6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02927
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PGMT
      - sbo: SBO:0000176
  - !!omap
    - id: FRUK
    - name: fructose-1-phosphate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - f1p_c: -1.0
      - fdp_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02356
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FRUK
      - rhea: RHEA:14213
      - sbo: SBO:0000176
  - !!omap
    - id: SPMDAT1
    - name: Spermidine acetyltransferase
    - metabolites: !!omap
      - N1aspmd_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - h_c: 1.0
      - spmd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01710
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SPMDAT1
      - rhea: RHEA:28150
      - sbo: SBO:0000176
  - !!omap
    - id: RHCCE
    - name: S-ribosylhomocysteine cleavage enzyme
    - metabolites: !!omap
      - dhptd_c: 1.0
      - hcys__L_c: 1.0
      - rhcys_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02924
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: RHCCE
      - rhea: RHEA:17753
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dha_e
    - name: Exchange of dihydroxyacetone.
    - metabolites: !!omap
      - dha_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dha_e
      - sbo: SBO:0000627
  - !!omap
    - id: KG6PDC
    - name: 3-keto-L-gulonate 6-phosphate decarboxylase
    - metabolites: !!omap
      - 3dhgulnp_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - xu5p__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04701
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: KG6PDC
      - rhea: RHEA:14353
      - sbo: SBO:0000176
  - !!omap
    - id: SPMDAT2
    - name: Spermidine acetyltransferase (N8)
    - metabolites: !!omap
      - accoa_c: -1.0
      - coa_c: 1.0
      - h_c: 1.0
      - n8aspmd_c: 1.0
      - spmd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01710
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SPMDAT2
      - rhea: RHEA:28270
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__TDPADGAT
    - name: DTDP-4-amino-4,6-dideoxy-D-glucose acetyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dtdp4aaddg_c: 1.0
      - __Ecoli_panGEMs__dtdp4addg_c: -1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04219
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TDPADGAT
      - sbo: SBO:0000176
  - !!omap
    - id: MALS
    - name: malate synthase
    - metabolites: !!omap
      - accoa_c: -1.0
      - coa_c: 1.0
      - glx_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mal__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04483
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: MALS
      - rhea: RHEA:18181
      - sbo: SBO:0000176
  - !!omap
    - id: X5PL3E
    - name: L-xylulose 5-phosphate 3-epimerase
    - metabolites: !!omap
      - ru5p__L_c: 1.0
      - xu5p__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04702 or MNJNJBIH_03983
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: X5PL3E
      - rhea: RHEA:18497
      - sbo: SBO:0000176
  - !!omap
    - id: DOGULNR
    - name: 2,3 dioxo-L-gulonate reductase
    - metabolites: !!omap
      - 23doguln_c: -1.0
      - 3dhguln_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03977
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DOGULNR
      - rhea: RHEA:21924
      - sbo: SBO:0000176
  - !!omap
    - id: TRE6PP
    - name: trehalose-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - tre6p_c: -1.0
      - tre_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02056
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TRE6PP
      - rhea: RHEA:23420
      - sbo: SBO:0000176
  - !!omap
    - id: EX_fuc__L_e
    - name: Exchange of alpha-L-fucose.
    - metabolites: !!omap
      - fuc__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fuc__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__met__D_e
    - name: D-Methionine exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__met__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__met__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tartr__L_e
    - name: Exchange of L-tartrate(2-).
    - metabolites: !!omap
      - tartr__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tartr__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: BETALDHx
    - name: betaine-aldehyde dehydrogenase
    - metabolites: !!omap
      - betald_c: -1.0
      - glyb_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00330
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: BETALDHx
      - rhea: RHEA:15305
      - sbo: SBO:0000176
  - !!omap
    - id: BETALDHy
    - name: betaine-aldehyde dehydrogenase
    - metabolites: !!omap
      - betald_c: -1.0
      - glyb_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00330
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: BETALDHy
      - rhea: RHEA:30067
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTG3
    - name: Maltodextrin glucosidase (maltopentaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltpt_c: -1.0
      - __Ecoli_panGEMs__maltttr_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00445
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTG3
      - sbo: SBO:0000176
  - !!omap
    - id: EX_taur_e
    - name: Exchange of taurine zwitterion.
    - metabolites: !!omap
      - taur_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_taur_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__maltpt_e
    - name: Maltopentaose exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltpt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__maltpt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glyald_e
    - name: Exchange of D-glyceraldehyde.
    - metabolites: !!omap
      - glyald_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyald_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glcur_e
    - name: Exchange of D-glucopyranuronate.
    - metabolites: !!omap
      - glcur_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glcur_e
      - sbo: SBO:0000627
  - !!omap
    - id: ADPRDP_1
    - name: ADPribose diphosphatase
    - metabolites: !!omap
      - adprib_c: -1.0
      - amp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - r5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03757 or MNJNJBIH_03347
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADPRDP_1
      - rhea: RHEA:10412
      - sbo: SBO:0000176
  - !!omap
    - id: DKGLCNR1
    - name: 2,5-diketo-D-gluconate reductase
    - metabolites: !!omap
      - 25dkglcn_c: -1.0
      - 2dhguln_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03326 or MNJNJBIH_00245
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DKGLCNR1
      - rhea: RHEA:35111
      - sbo: SBO:0000176
  - !!omap
    - id: NADTRHD
    - name: NAD transhydrogenase
    - metabolites: !!omap
      - nad_c: -1.0
      - nadh_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04430
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADTRHD
      - rhea: RHEA:11692
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FMNRx2
    - name: FMN reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: -1.0
      - fmnh2_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04282 or MNJNJBIH_01048
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FMNRx2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPS1
    - name: Acyl-carrier protein synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__apoACP_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - pap_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02803 or MNJNJBIH_03847
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPS1
      - sbo: SBO:0000176
  - !!omap
    - id: EX_nmn_e
    - name: Exchange of NMN(-).
    - metabolites: !!omap
      - nmn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_nmn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_urea_e
    - name: Exchange of urea.
    - metabolites: !!omap
      - urea_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_urea_e
      - sbo: SBO:0000627
  - !!omap
    - id: ARAI
    - name: L-arabinose isomerase
    - metabolites: !!omap
      - arab__L_c: -1.0
      - rbl__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00089
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ARAI
      - sbo: SBO:0000176
  - !!omap
    - id: M1PD
    - name: mannitol-1-phosphate 5-dehydrogenase
    - metabolites: !!omap
      - f6p_c: 1.0
      - h_c: 1.0
      - mnl1p_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04007
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: M1PD
      - rhea: RHEA:19661
      - sbo: SBO:0000176
  - !!omap
    - id: G3PD2
    - name: glycerol-3-phosphate dehydrogenase (NADP)
    - metabolites: !!omap
      - dhap_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04018
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: G3PD2
      - rhea: RHEA:11096
      - sbo: SBO:0000176
  - !!omap
    - id: DGGH
    - name: a-galactosidase (melibiose)
    - metabolites: !!omap
      - gal_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - melib_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04605
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DGGH
      - sbo: SBO:0000176
  - !!omap
    - id: FCI
    - name: L-fucose isomerase
    - metabolites: !!omap
      - fcl__L_c: 1.0
      - fuc__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03057
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FCI
      - sbo: SBO:0000176
  - !!omap
    - id: FCLK
    - name: L-fuculokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fc1p_c: 1.0
      - fcl__L_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03058
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FCLK
      - rhea: RHEA:12376
      - sbo: SBO:0000176
  - !!omap
    - id: FCLPA
    - name: L-fuculose 1-phosphate aldolase
    - metabolites: !!omap
      - dhap_c: 1.0
      - fc1p_c: -1.0
      - lald__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02996 or MNJNJBIH_03055
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FCLPA
      - rhea: RHEA:12933
      - sbo: SBO:0000176
  - !!omap
    - id: GMPS2
    - name: GMP synthase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - gmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ppi_c: 1.0
      - xmp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02723
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: GMPS2
      - rhea: RHEA:11680
      - sbo: SBO:0000176
  - !!omap
    - id: AMPN
    - name: AMP nucleosidase
    - metabolites: !!omap
      - ade_c: 1.0
      - amp_c: -1.0
      - h2o_c: -1.0
      - r5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02163
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: AMPN
      - rhea: RHEA:20129
      - sbo: SBO:0000176
  - !!omap
    - id: GSNK
    - name: guanosine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gmp_c: 1.0
      - gsn_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00527
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GSNK
      - rhea: RHEA:27710
      - sbo: SBO:0000176
  - !!omap
    - id: ACCOAL
    - name: acetate-CoA ligase (ADP-forming)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - pi_c: 1.0
      - ppcoa_c: 1.0
      - prpnte_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00368
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ACCOAL
      - rhea: RHEA:29843
      - sbo: SBO:0000176
  - !!omap
    - id: GALUi
    - name: UTP-glucose-1-phosphate uridylyltransferase (irreversible)
    - metabolites: !!omap
      - g1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - udpg_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05144
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: GALUi
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__U23GAAT
    - name: UDP-3-O-(3-hydroxymyristoyl)glucosamine acyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hmrsACP_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__u23ga_c: 1.0
      - h_c: 1.0
      - u3hga_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00220
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__U23GAAT
      - sbo: SBO:0000176
  - !!omap
    - id: EX_f6p_e
    - name: Exchange of beta-D-fructofuranose 6-phosphate(2-).
    - metabolites: !!omap
      - f6p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_f6p_e
      - sbo: SBO:0000627
  - !!omap
    - id: UAAGDS
    - name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate 
        synthetase
    - metabolites: !!omap
      - 26dap__M_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uamag_c: -1.0
      - ugmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00115
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAAGDS
      - rhea: RHEA:23676
      - sbo: SBO:0000176
  - !!omap
    - id: UAMAS
    - name: UDP-N-acetylmuramoyl-L-alanine synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - ala__L_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uama_c: 1.0
      - uamr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00124
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAMAS
      - sbo: SBO:0000176
  - !!omap
    - id: UAMAGS
    - name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glu__D_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uama_c: -1.0
      - uamag_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00118
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UAMAGS
      - sbo: SBO:0000176
  - !!omap
    - id: UGLYCH
    - name: Ureidoglycolate hydrolase
    - metabolites: !!omap
      - co2_c: 1.0
      - glx_c: 1.0
      - h2o_c: -1.0
      - h_c: -2.0
      - nh4_c: 2.0
      - urdglyc_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00559
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: UGLYCH
      - rhea: RHEA:19809
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP3
    - name: Nucleoside triphosphate pyrophosphorylase (dctp)
    - metabolites: !!omap
      - dcmp_c: 1.0
      - dctp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02447 or MNJNJBIH_03036 or MNJNJBIH_01903
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP3
      - rhea: RHEA:22636
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP6
    - name: Nucleoside triphosphate pyrophosphorylase (atp)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03036 or MNJNJBIH_01009
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP6
      - rhea: RHEA:14245
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP7
    - name: Nucleoside triphosphate pyrophosphorylase (dttp)
    - metabolites: !!omap
      - dtmp_c: 1.0
      - dttp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03036 or MNJNJBIH_02447 or MNJNJBIH_03591
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP7
      - rhea: RHEA:28534
      - sbo: SBO:0000176
  - !!omap
    - id: OP4ENH
    - name: 2-oxopent-4-enoate hydratase
    - metabolites: !!omap
      - 4h2opntn_c: 1.0
      - h2o_c: -1.0
      - op4en_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00390
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: OP4ENH
      - sbo: SBO:0000176
  - !!omap
    - id: EX_rmn_e
    - name: Exchange of L-rhamnopyranose.
    - metabolites: !!omap
      - rmn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_rmn_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTPP8
    - name: Nucleoside triphosphate pyrophosphorylase (utp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - ump_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03036 or MNJNJBIH_03591
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP8
      - rhea: RHEA:29395
      - sbo: SBO:0000176
  - !!omap
    - id: P5CR
    - name: pyrroline-5-carboxylate reductase
    - metabolites: !!omap
      - h_c: -2.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pro__L_c: 1.0
      - pyr5carb_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00427
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: P5CR
      - rhea: RHEA:14109
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CYANST
    - name: Cyanide sulfurtransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__tsul_c: -1.0
      - cyan_c: -1.0
      - h_c: 1.0
      - so3_c: 1.0
      - tcynt_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03789 or MNJNJBIH_02904 or MNJNJBIH_02744
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CYANST
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ttdca_e
    - name: Exchange of tetradecanoate.
    - metabolites: !!omap
      - ttdca_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ttdca_e
      - sbo: SBO:0000627
  - !!omap
    - id: DHPPDA2
    - name: diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)
    - metabolites: !!omap
      - 25drapp_c: -1.0
      - 5apru_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00456
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHPPDA2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GMAND
    - name: GDP-D-mannose dehydratase
    - metabolites: !!omap
      - __Ecoli_panGEMs__gdpofuc_DUP1_c: 1.0
      - gdpmann_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05082
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GMAND
      - sbo: SBO:0000176
  - !!omap
    - id: PPCSCT
    - name: 'Propanoyl-CoA: succinate CoA-transferase'
    - metabolites: !!omap
      - ppcoa_c: -1.0
      - prpnte_c: 1.0
      - succ_c: -1.0
      - succoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03198
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PPCSCT
      - rhea: RHEA:28010
      - sbo: SBO:0000176
  - !!omap
    - id: CYTD
    - name: cytidine deaminase
    - metabolites: !!omap
      - cytd_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
      - uri_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02331
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CYTD
      - rhea: RHEA:16069
      - sbo: SBO:0000176
  - !!omap
    - id: HPYRRx
    - name: Hydroxypyruvate reductase (NADH)
    - metabolites: !!omap
      - glyc__R_c: 1.0
      - h_c: -1.0
      - hpyr_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01164 or MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HPYRRx
      - rhea: RHEA:17905
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCDx
    - name: Glycerol dehydrogenase
    - metabolites: !!omap
      - dha_c: 1.0
      - glyc_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05169
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLYCDx
      - rhea: RHEA:13769
      - sbo: SBO:0000176
  - !!omap
    - id: ASP1DC
    - name: aspartate 1-decarboxylase
    - metabolites: !!omap
      - ala_B_c: 1.0
      - asp__L_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00167
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ASP1DC
      - rhea: RHEA:19497
      - sbo: SBO:0000176
  - !!omap
    - id: UGMDDS
    - name: 
        UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
        synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - alaala_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ugmd_c: -1.0
      - ugmda_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00116
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UGMDDS
      - rhea: RHEA:28374
      - sbo: SBO:0000176
  - !!omap
    - id: DCYTD
    - name: deoxycytidine deaminase
    - metabolites: !!omap
      - dcyt_c: -1.0
      - duri_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02331
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DCYTD
      - rhea: RHEA:13433
      - sbo: SBO:0000176
  - !!omap
    - id: DBTS
    - name: dethiobiotin synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - co2_c: -1.0
      - dann_c: -1.0
      - dtbt_c: 1.0
      - h_c: 3.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00849
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DBTS
      - rhea: RHEA:15805
      - sbo: SBO:0000176
  - !!omap
    - id: UHGADA
    - name: UDP-3-O-acetylglucosamine deacetylase
    - metabolites: !!omap
      - ac_c: 1.0
      - h2o_c: -1.0
      - u3aga_c: -1.0
      - u3hga_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00129
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: UHGADA
      - rhea: RHEA:25209
      - sbo: SBO:0000176
  - !!omap
    - id: ATPPRT
    - name: ATP phosphoribosyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - ppi_c: 1.0
      - prbatp_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02213
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: ATPPRT
      - rhea: RHEA:18473
      - sbo: SBO:0000176
  - !!omap
    - id: DHDPS
    - name: dihydrodipicolinate synthase
    - metabolites: !!omap
      - 23dhdp_c: 1.0
      - aspsa_c: -1.0
      - h2o_c: 2.0
      - h_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02688
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: DHDPS
      - rhea: RHEA:14845
      - sbo: SBO:0000176
  - !!omap
    - id: G1PACT
    - name: glucosamine-1-phosphate N-acetyltransferase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acgam1p_c: 1.0
      - coa_c: 1.0
      - gam1p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04160
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: G1PACT
      - rhea: RHEA:13725
      - sbo: SBO:0000176
  - !!omap
    - id: GART
    - name: GAR transformylase-T
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fgam_c: 1.0
      - for_c: -1.0
      - gar_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02000
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: GART
      - rhea: RHEA:24829
      - sbo: SBO:0000176
  - !!omap
    - id: CSND
    - name: Cytosine deaminase
    - metabolites: !!omap
      - csn_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
      - ura_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00370
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CSND
      - rhea: RHEA:20605
      - sbo: SBO:0000176
  - !!omap
    - id: GF6PTA
    - name: glutamine-fructose-6-phosphate transaminase
    - metabolites: !!omap
      - f6p_c: -1.0
      - gam6p_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04159
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: GF6PTA
      - sbo: SBO:0000176
  - !!omap
    - id: IGPDH
    - name: imidazoleglycerol-phosphate dehydratase
    - metabolites: !!omap
      - eig3p_c: -1.0
      - h2o_c: 1.0
      - imacp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02218
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: IGPDH
      - rhea: RHEA:11040
      - sbo: SBO:0000176
  - !!omap
    - id: EX_glyclt_e
    - name: Exchange of glycolate.
    - metabolites: !!omap
      - glyclt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyclt_e
      - sbo: SBO:0000627
  - !!omap
    - id: PRPPS
    - name: phosphoribosylpyrophosphate synthetase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - prpp_c: 1.0
      - r5p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01340
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: PRPPS
      - rhea: RHEA:15609
      - sbo: SBO:0000176
  - !!omap
    - id: H2SO
    - name: Hydrogen sulfide oxidation
    - metabolites: !!omap
      - h2s_c: -1.0
      - h_c: 2.0
      - o2_c: -2.0
      - so4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: H2SO:2
      - sbo: SBO:0000176
  - !!omap
    - id: GLUCYS
    - name: gamma-glutamylcysteine synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: -1.0
      - glu__L_c: -1.0
      - glucys_c: 1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02925
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GLUCYS
      - rhea: RHEA:13285
      - sbo: SBO:0000176
  - !!omap
    - id: PRATPP
    - name: phosphoribosyl-ATP pyrophosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - prbamp_c: 1.0
      - prbatp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02222
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: PRATPP
      - rhea: RHEA:22828
      - sbo: SBO:0000176
  - !!omap
    - id: GLUN_1
    - name: glutaminase
    - metabolites: !!omap
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00540 or MNJNJBIH_01678
    - subsystem: Glutamate Metabolism
    - annotation: !!omap
      - biggr: GLUN_1
      - rhea: RHEA:15889
      - sbo: SBO:0000176
  - !!omap
    - id: PRMICI
    - name: 
        1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide
        isomerase
    - metabolites: !!omap
      - prfp_c: -1.0
      - prlp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02220
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: PRMICI
      - rhea: RHEA:15469
      - sbo: SBO:0000176
  - !!omap
    - id: GLUPRT
    - name: glutamine phosphoribosyldiphosphate amidotransferase
    - metabolites: !!omap
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - ppi_c: 1.0
      - pram_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02514
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: GLUPRT
      - rhea: RHEA:14905
      - sbo: SBO:0000176
  - !!omap
    - id: EX_g6p_e
    - name: Exchange of D-glucopyranose 6-phosphate(2-).
    - metabolites: !!omap
      - g6p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g6p_e
      - sbo: SBO:0000627
  - !!omap
    - id: CYSS_2
    - name: cysteine synthase
    - metabolites: !!omap
      - ac_c: 1.0
      - acser_c: -1.0
      - cys__L_c: 1.0
      - h2s_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02623 or MNJNJBIH_02616
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: CYSS_2:2
      - rhea: RHEA:14829
      - sbo: SBO:0000176
  - !!omap
    - id: NADS1
    - name: NAD synthase (nh3)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - dnad_c: -1.0
      - h_c: 1.0
      - nad_c: 1.0
      - nh4_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01882
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NADS1
      - rhea: RHEA:21188
      - sbo: SBO:0000176
  - !!omap
    - id: EX_2ddglcn_e
    - name: Exchange of 2-dehydro-3-deoxy-D-gluconate.
    - metabolites: !!omap
      - 2ddglcn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_2ddglcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PAPSR
    - name: Phosphoadenylyl-sulfate reductase (thioredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - h_c: 2.0
      - pap_c: 1.0
      - paps_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02826 and MNJNJBIH_03014) or (MNJNJBIH_04210
        and MNJNJBIH_03014)
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPSR
      - sbo: SBO:0000176
  - !!omap
    - id: ASPK
    - name: aspartate kinase
    - metabolites: !!omap
      - 4pasp_c: 1.0
      - adp_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00013 or MNJNJBIH_04502 or MNJNJBIH_04503
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: ASPK
      - rhea: RHEA:23776
      - sbo: SBO:0000176
  - !!omap
    - id: DAPDC
    - name: diaminopimelate decarboxylase
    - metabolites: !!omap
      - 26dap__M_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - lys__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03099
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: DAPDC
      - rhea: RHEA:15101
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mmet_e
    - name: Exchange of S-methyl-L-methionine zwitterion.
    - metabolites: !!omap
      - mmet_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mmet_e
      - sbo: SBO:0000627
  - !!omap
    - id: GARFT
    - name: phosphoribosylglycinamide formyltransferase
    - metabolites: !!omap
      - 10fthf_c: -1.0
      - fgam_c: 1.0
      - gar_c: -1.0
      - h_c: 1.0
      - thf_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02713
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: GARFT
      - rhea: RHEA:15053
      - sbo: SBO:0000176
  - !!omap
    - id: PHETA1
    - name: phenylalanine transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - glu__L_c: 1.0
      - phe__L_c: -1.0
      - phpyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04544 or MNJNJBIH_01034 or MNJNJBIH_04197
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: PHETA1
      - rhea: RHEA:25152
      - sbo: SBO:0000176
  - !!omap
    - id: PPND
    - name: prephenate dehydrogenase
    - metabolites: !!omap
      - 34hpp_c: 1.0
      - co2_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pphn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02846
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: PPND
      - sbo: SBO:0000176
  - !!omap
    - id: METAT
    - name: methionine adenosyltransferase
    - metabolites: !!omap
      - amet_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - met__L_c: -1.0
      - pi_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03219
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: METAT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ASCBPL
    - name: L-ascorbate 6-phosphate lactonase
    - metabolites: !!omap
      - 3dhgulnp_c: 1.0
      - __Ecoli_panGEMs__ascb6p_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04697
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ASCBPL
      - sbo: SBO:0000176
  - !!omap
    - id: ACBIPGT
    - name: Adenosyl cobinamide phosphate guanyltransferase
    - metabolites: !!omap
      - adocbip_c: -1.0
      - agdpcbi_c: 1.0
      - gtp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02177
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ACBIPGT
      - rhea: RHEA:22712
      - sbo: SBO:0000176
  - !!omap
    - id: TRPS1
    - name: tryptophan synthase (indoleglycerol phosphate)
    - metabolites: !!omap
      - 3ig3p_c: -1.0
      - g3p_c: 1.0
      - h2o_c: 1.0
      - ser__L_c: -1.0
      - trp__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01406 and MNJNJBIH_01407
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: TRPS1
      - sbo: SBO:0000176
  - !!omap
    - id: PRAMPC_1
    - name: phosphoribosyl-AMP cyclohydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - prbamp_c: -1.0
      - prfp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02222
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: PRAMPC_1
      - rhea: RHEA:20049
      - sbo: SBO:0000176
  - !!omap
    - id: ADOCBLS
    - name: Adenosylcobalamin 5'-phosphate synthase
    - metabolites: !!omap
      - adocbl_c: 1.0
      - agdpcbi_c: -1.0
      - gmp_c: 1.0
      - h_c: 1.0
      - rdmbzi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02176
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ADOCBLS
      - rhea: RHEA:16049
      - sbo: SBO:0000176
  - !!omap
    - id: EX_galct__D_e
    - name: Exchange of galactarate(2-).
    - metabolites: !!omap
      - galct__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galct__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: ADOCBIK
    - name: Adenosyl cobinamide kinase
    - metabolites: !!omap
      - adocbi_c: -1.0
      - adocbip_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02177
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ADOCBIK
      - rhea: RHEA:15769
      - sbo: SBO:0000176
  - !!omap
    - id: TMPK
    - name: thiamine-phosphate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - thmmp_c: -1.0
      - thmpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00459
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: TMPK
      - rhea: RHEA:15913
      - sbo: SBO:0000176
  - !!omap
    - id: HPPPNDO
    - name: 2,3-dihydroxypheylpropionate 1,2-dioxygenase
    - metabolites: !!omap
      - dhpppn_c: -1.0
      - h_c: 1.0
      - hkndd_c: 1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00388
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HPPPNDO
      - sbo: SBO:0000176
  - !!omap
    - id: MCITL2
    - name: methylisocitrate lyase
    - metabolites: !!omap
      - micit_c: -1.0
      - pyr_c: 1.0
      - succ_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00362
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MCITL2
      - rhea: RHEA:16809
      - sbo: SBO:0000176
  - !!omap
    - id: MDH3
    - name: Malate dehydrogenase (menaquinone 8 as acceptor)
    - metabolites: !!omap
      - mal__L_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - oaa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02402
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: MDH3
      - rhea: RHEA:29087
      - sbo: SBO:0000176
  - !!omap
    - id: SOTA
    - name: Succinylornithine transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - glu__L_c: 1.0
      - sucgsa_c: 1.0
      - sucorn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01890
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SOTA
      - rhea: RHEA:16953
      - sbo: SBO:0000176
  - !!omap
    - id: DHCINDO
    - name: 2,3-dihydroxycinnamate 1,2-dioxygenase
    - metabolites: !!omap
      - 34dhcinm_c: -1.0
      - h_c: 1.0
      - hkntd_c: 1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00388
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DHCINDO
      - sbo: SBO:0000176
  - !!omap
    - id: HKNDDH
    - name: 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - hkndd_c: -1.0
      - op4en_c: 1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00389
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HKNDDH
      - sbo: SBO:0000176
  - !!omap
    - id: EX_idon__L_e
    - name: Exchange of L-idonate.
    - metabolites: !!omap
      - idon__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_idon__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: HKNTDH_1
    - name: 2-hydroxy-6-ketononotrienedioate hydrolase
    - metabolites: !!omap
      - fum_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hkntd_c: -1.0
      - op4en_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00389
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HKNTDH_1
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCK2
    - name: glycerate kinase
    - metabolites: !!omap
      - 2pg_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc__R_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00567
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: GLYCK2
      - rhea: RHEA:27377
      - sbo: SBO:0000176
  - !!omap
    - id: PTA2
    - name: Phosphate acetyltransferase
    - metabolites: !!omap
      - coa_c: 1.0
      - pi_c: -1.0
      - ppap_c: 1.0
      - ppcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02499
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PTA2
      - rhea: RHEA:28046
      - sbo: SBO:0000176
  - !!omap
    - id: MDH2
    - name: Malate dehydrogenase (ubiquinone 8 as acceptor)
    - metabolites: !!omap
      - mal__L_c: -1.0
      - oaa_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02402
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: MDH2
      - rhea: RHEA:29083
      - sbo: SBO:0000176
  - !!omap
    - id: EX_indole_e
    - name: Indole exchange
    - metabolites: !!omap
      - indole_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_indole_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACOTA
    - name: acetylornithine transaminase
    - metabolites: !!omap
      - acg5sa_c: 1.0
      - acorn_c: -1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01890 or MNJNJBIH_03711 or MNJNJBIH_02898
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ACOTA
      - rhea: RHEA:18049
      - sbo: SBO:0000176
  - !!omap
    - id: PDX5PS
    - name: Pyridoxine 5'-phosphate synthase
    - metabolites: !!omap
      - co2_c: 1.0
      - dxyl5p_c: -1.0
      - h2o_c: 2.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pdx5p_c: 1.0
      - phthr_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02804 and MNJNJBIH_00077
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PDX5PS
      - sbo: SBO:0000176
  - !!omap
    - id: PPBNGS
    - name: porphobilinogen synthase
    - metabolites: !!omap
      - 5aop_c: -2.0
      - h2o_c: 2.0
      - h_c: 1.0
      - ppbng_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00411
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PPBNGS
      - rhea: RHEA:24064
      - sbo: SBO:0000176
  - !!omap
    - id: ENTCS
    - name: enterochelin synthase
    - metabolites: !!omap
      - 23dhba_c: -3.0
      - amp_c: 6.0
      - enter_c: 1.0
      - h_c: 9.0
      - seramp_c: -3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00621
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ENTCS:2
      - rhea: RHEA:28566
      - sbo: SBO:0000176
  - !!omap
    - id: MANPGH
    - name: 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase
    - metabolites: !!omap
      - glyc__R_c: 1.0
      - h2o_c: -1.0
      - man6p_c: 1.0
      - man6pglyc_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00797
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MANPGH
      - rhea: RHEA:27866
      - sbo: SBO:0000176
  - !!omap
    - id: URDGLYCD
    - name: ureidoglycolate dehydrogenase
    - metabolites: !!omap
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - oxur_c: 1.0
      - urdglyc_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00570
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: URDGLYCD
      - rhea: RHEA:15329
      - sbo: SBO:0000176
  - !!omap
    - id: CBMKr
    - name: Carbamate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cbp_c: 1.0
      - co2_c: -1.0
      - h_c: 2.0
      - nh4_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00576
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: CBMKr
      - sbo: SBO:0000176
  - !!omap
    - id: PPNCL2_1
    - name: phosphopantothenate-cysteine ligase
    - metabolites: !!omap
      - 4ppan_c: -1.0
      - 4ppcys_c: 1.0
      - cmp_c: 1.0
      - ctp_c: -1.0
      - cys__L_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04050
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PPNCL2_1
      - rhea: RHEA:19397
      - sbo: SBO:0000176
  - !!omap
    - id: PRAGSr
    - name: phosphoribosylglycinamide synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gar_c: 1.0
      - gly_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - pram_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04477
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: PRAGSr
      - rhea: RHEA:17453
      - sbo: SBO:0000176
  - !!omap
    - id: PRFGS
    - name: phosphoribosylformylglycinamidine synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fgam_c: -1.0
      - fpram_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02793
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: PRFGS
      - rhea: RHEA:17129
      - sbo: SBO:0000176
  - !!omap
    - id: EX_3hcinnm_e
    - name: Exchange of trans-3-coumarate.
    - metabolites: !!omap
      - 3hcinnm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3hcinnm_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACM6PH
    - name: N-acetylmuramate 6-phosphate hydrolase
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acmum6p_c: -1.0
      - h2o_c: -1.0
      - lac__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02631
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ACM6PH
      - sbo: SBO:0000176
  - !!omap
    - id: NNATr
    - name: nicotinate-nucleotide adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - dnad_c: 1.0
      - h_c: -1.0
      - nicrnt_c: -1.0
      - ppi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00692
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NNATr
      - rhea: RHEA:22860
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDH
    - name: Cytidine hydrolase
    - metabolites: !!omap
      - csn_c: 1.0
      - cytd_c: -1.0
      - h2o_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02351 or MNJNJBIH_00704 or MNJNJBIH_00047
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: CYTDH
      - rhea: RHEA:27958
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acac_e
    - name: Exchange of acetoacetate.
    - metabolites: !!omap
      - acac_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acac_e
      - sbo: SBO:0000627
  - !!omap
    - id: ETHAAL
    - name: Ethanolamine ammonia-lyase
    - metabolites: !!omap
      - acald_c: 1.0
      - etha_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02647 and MNJNJBIH_02646
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: ETHAAL
      - rhea: RHEA:15313
      - sbo: SBO:0000176
  - !!omap
    - id: MAN1PT2
    - name: mannose-1-phosphate guanylyltransferase (GDP)
    - metabolites: !!omap
      - gdp_c: -1.0
      - gdpmann_c: 1.0
      - h_c: -1.0
      - man1p_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05085
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: MAN1PT2
      - rhea: RHEA:12905
      - sbo: SBO:0000176
  - !!omap
    - id: PSERT
    - name: phosphoserine transaminase
    - metabolites: !!omap
      - 3php_c: -1.0
      - akg_c: 1.0
      - glu__L_c: -1.0
      - pser_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01011
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: PSERT
      - rhea: RHEA:14329
      - sbo: SBO:0000176
  - !!omap
    - id: AP4AH
    - name: Ap4A hydrolase
    - metabolites: !!omap
      - adp_c: 2.0
      - ap4a_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00074
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: AP4AH
      - rhea: RHEA:24252
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acmana_e
    - name: Exchange of N-acetyl-D-mannosamine.
    - metabolites: !!omap
      - acmana_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acmana_e
      - sbo: SBO:0000627
  - !!omap
    - id: AP5AH
    - name: Ap5A hydrolase
    - metabolites: !!omap
      - adp_c: 1.0
      - ap5a_c: -1.0
      - atp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00074
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: AP5AH
      - rhea: RHEA:30527
      - sbo: SBO:0000176
  - !!omap
    - id: ADNCYC
    - name: adenylate cyclase
    - metabolites: !!omap
      - atp_c: -1.0
      - camp_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04237
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADNCYC
      - rhea: RHEA:15389
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AIRC2
    - name: Phosphoribosylaminoimidazole carboxylase
    - metabolites: !!omap
      - 5caiz_c: 1.0
      - __Ecoli_panGEMs__air_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2co3_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00578
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AIRC2
      - sbo: SBO:0000176
  - !!omap
    - id: GAPD
    - name: glyceraldehyde-3-phosphate dehydrogenase
    - metabolites: !!omap
      - 13dpg_c: 1.0
      - g3p_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01923 or MNJNJBIH_01561
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: GAPD
      - sbo: SBO:0000176
  - !!omap
    - id: EX_galur_e
    - name: Exchange of aldehydo-D-galacturonate.
    - metabolites: !!omap
      - galur_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galur_e
      - sbo: SBO:0000627
  - !!omap
    - id: MCITS
    - name: 2-methylcitrate synthase
    - metabolites: !!omap
      - 2mcit_c: 1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - oaa_c: -1.0
      - ppcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00364
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MCITS
      - rhea: RHEA:57492
      - sbo: SBO:0000176
  - !!omap
    - id: PPAKr
    - name: Propionate kinase
    - metabolites: !!omap
      - adp_c: -1.0
      - atp_c: 1.0
      - ppap_c: -1.0
      - prpnte_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03445
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PPAKr
      - rhea: RHEA:23148
      - sbo: SBO:0000176
  - !!omap
    - id: HEX1
    - name: hexokinase (D-glucose:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g6p_c: 1.0
      - glc__D_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02586
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: HEX1
      - rhea: RHEA:17825
      - sbo: SBO:0000176
  - !!omap
    - id: GND
    - name: phosphogluconate dehydrogenase
    - metabolites: !!omap
      - 6pgc_c: -1.0
      - co2_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ru5p__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02225
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: GND
      - rhea: RHEA:10116
      - sbo: SBO:0000176
  - !!omap
    - id: TAUDO
    - name: Taurine dioxygenase
    - metabolites: !!omap
      - aacald_c: 1.0
      - akg_c: -1.0
      - co2_c: 1.0
      - h_c: 1.0
      - o2_c: -1.0
      - so3_c: 1.0
      - succ_c: 1.0
      - taur_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00410
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TAUDO:2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_amob_c
    - name: Exchange of S-adenosyl-4-methylthio-2-oxobutanoate.
    - metabolites: !!omap
      - amob_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular demand
    - annotation: !!omap
      - biggr: EX_amob_c
      - sbo: SBO:0000627
  - !!omap
    - id: NTP3
    - name: nucleoside-triphosphatase (GTP)
    - metabolites: !!omap
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04655 or MNJNJBIH_04812 or MNJNJBIH_02979 or 
        MNJNJBIH_03196 or MNJNJBIH_02362 or MNJNJBIH_03993 or MNJNJBIH_04674
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTP3
      - rhea: RHEA:19669
      - sbo: SBO:0000176
  - !!omap
    - id: MOAT2
    - name: 3-deoxy-D-manno-octulosonic acid transferase
    - metabolites: !!omap
      - ckdo_c: -1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - kdo2lipid4_c: 1.0
      - kdolipid4_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04043
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: MOAT2
      - rhea: RHEA:28062
      - sbo: SBO:0000176
  - !!omap
    - id: EX_adn_e
    - name: Exchange of adenosine.
    - metabolites: !!omap
      - adn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_adn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ins_e
    - name: Exchange of inosine.
    - metabolites: !!omap
      - ins_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ins_e
      - sbo: SBO:0000627
  - !!omap
    - id: G6PDH2r
    - name: glucose 6-phosphate dehydrogenase
    - metabolites: !!omap
      - 6pgl_c: 1.0
      - g6p_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02003
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: G6PDH2r
      - rhea: RHEA:15841
      - sbo: SBO:0000176
  - !!omap
    - id: ME2
    - name: malic enzyme (NADP)
    - metabolites: !!omap
      - co2_c: 1.0
      - mal__L_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02662
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: ME2
      - rhea: RHEA:18253
      - sbo: SBO:0000176
  - !!omap
    - id: ARGSL
    - name: argininosuccinate lyase
    - metabolites: !!omap
      - arg__L_c: 1.0
      - argsuc_c: -1.0
      - fum_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04427
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ARGSL
      - rhea: RHEA:24020
      - sbo: SBO:0000176
  - !!omap
    - id: GLU5K
    - name: glutamate 5-kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glu5p_c: 1.0
      - glu__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00291
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: GLU5K
      - rhea: RHEA:14877
      - sbo: SBO:0000176
  - !!omap
    - id: IPPS
    - name: 2-isopropylmalate synthase
    - metabolites: !!omap
      - 3c3hmp_c: 1.0
      - 3mob_c: -1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00105
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: IPPS
      - rhea: RHEA:21524
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mg2_e
    - name: Exchange of magnesium(2+).
    - metabolites: !!omap
      - mg2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mg2_e
      - sbo: SBO:0000627
  - !!omap
    - id: NADH5
    - name: NADH dehydrogenase (ubiquinone-8 )
    - metabolites: !!omap
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01247 or MNJNJBIH_00069 or MNJNJBIH_04143
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADH5
      - rhea: RHEA:29107
      - sbo: SBO:0000176
  - !!omap
    - id: MOHMT
    - name: 3-methyl-2-oxobutanoate hydroxymethyltransferase
    - metabolites: !!omap
      - 2dhp_c: 1.0
      - 3mob_c: -1.0
      - h2o_c: -1.0
      - mlthf_c: -1.0
      - thf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00170
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: MOHMT
      - rhea: RHEA:11824
      - sbo: SBO:0000176
  - !!omap
    - id: EX_glyc3p_e
    - name: Exchange of sn-glycerol 3-phosphate(2-).
    - metabolites: !!omap
      - glyc3p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyc3p_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MLTG2
    - name: Maltodextrin glucosidase (maltotetraose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malttr_c: 1.0
      - __Ecoli_panGEMs__maltttr_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00445
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTG2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_but_e
    - name: Exchange of butyrate.
    - metabolites: !!omap
      - but_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_but_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MLTG1
    - name: Maltodextrin glucosidase (maltotriose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malttr_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - malt_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00445
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTG1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AMALT3
    - name: Amylomaltase (maltopentaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthx_c: 1.0
      - __Ecoli_panGEMs__maltpt_c: -1.0
      - glc__D_c: 1.0
      - malt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03778
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AMALT3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTP3
    - name: Maltodextrin phosphorylase (maltoheptaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthp_c: -1.0
      - __Ecoli_panGEMs__malthx_c: 1.0
      - g1p_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03779
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTP3
      - sbo: SBO:0000176
  - !!omap
    - id: EX_lcts_e
    - name: Exchange of lactose.
    - metabolites: !!omap
      - lcts_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lcts_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ocdca_e
    - name: Exchange of octadecanoate.
    - metabolites: !!omap
      - ocdca_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ocdca_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cbl1_e
    - name: Exchange of cob(I)alamin(1-).
    - metabolites: !!omap
      - cbl1_e: -1.0
    - lower_bound: -0.01
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cbl1_e
      - sbo: SBO:0000627
  - !!omap
    - id: SPODM_1
    - name: superoxide dismutase
    - metabolites: !!omap
      - h2o2_c: 1.0
      - h_c: -2.0
      - o2_c: 1.0
      - o2s_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04360 or MNJNJBIH_01790
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: SPODM_1
      - rhea: RHEA:20696
      - sbo: SBO:0000176
  - !!omap
    - id: AHCYSNS
    - name: S-adenosylhomocysteine nucleosidase
    - metabolites: !!omap
      - ade_c: 1.0
      - ahcys_c: -1.0
      - h2o_c: -1.0
      - rhcys_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00199
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: AHCYSNS
      - rhea: RHEA:17805
      - sbo: SBO:0000176
  - !!omap
    - id: ACNML
    - name: N-Acetylneuraminate lyase
    - metabolites: !!omap
      - acmana_c: 1.0
      - acnam_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03566
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ACNML
      - sbo: SBO:0000176
  - !!omap
    - id: TMK
    - name: thiamine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - thm_c: -1.0
      - thmmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01243
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: TMK
      - rhea: RHEA:12012
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP4
    - name: Nucleoside triphosphate pyrophosphorylase (ctp)
    - metabolites: !!omap
      - cmp_c: 1.0
      - ctp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01903 or MNJNJBIH_03036
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP4
      - rhea: RHEA:27762
      - sbo: SBO:0000176
  - !!omap
    - id: GMPS
    - name: GMP synthase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - gmp_c: 1.0
      - h_c: 2.0
      - nh4_c: -1.0
      - ppi_c: 1.0
      - xmp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02723
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: GMPS
      - rhea: RHEA:18301
      - sbo: SBO:0000176
  - !!omap
    - id: CAT
    - name: catalase
    - metabolites: !!omap
      - h2o2_c: -2.0
      - h2o_c: 2.0
      - o2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01873 or MNJNJBIH_04402
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: CAT
      - rhea: RHEA:20309
      - sbo: SBO:0000176
  - !!omap
    - id: FTHFLi
    - name: formate-tetrahydrofolate ligase
    - metabolites: !!omap
      - 10fthf_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - for_c: -1.0
      - pi_c: 1.0
      - thf_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: FTHFLi
      - rhea: RHEA:20221
      - sbo: SBO:0000176
  - !!omap
    - id: EX_nac_e
    - name: Exchange of nicotinate.
    - metabolites: !!omap
      - nac_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_nac_e
      - sbo: SBO:0000627
  - !!omap
    - id: UDPGD
    - name: UDPglucose 6-dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 3.0
      - nad_c: -2.0
      - nadh_c: 2.0
      - udpg_c: -1.0
      - udpglcur_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02224
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UDPGD
      - rhea: RHEA:23596
      - sbo: SBO:0000176
  - !!omap
    - id: SERASr
    - name: (L-seryl)adenylate synthase
    - metabolites: !!omap
      - atp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - ser__L_c: -1.0
      - seramp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00628
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: SERASr:2
      - rhea: RHEA:28570
      - sbo: SBO:0000176
  - !!omap
    - id: GLCRD
    - name: glucarate dehydratase
    - metabolites: !!omap
      - 5dh4dglc_c: 1.0
      - glcr_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03043 or MNJNJBIH_03042
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLCRD
      - rhea: RHEA:14573
      - sbo: SBO:0000176
  - !!omap
    - id: PPPNDO
    - name: Phenylpropanoate Dioxygenase
    - metabolites: !!omap
      - cechddd_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - o2_c: -1.0
      - pppn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02770 and MNJNJBIH_02765 and MNJNJBIH_02767 
        and MNJNJBIH_02766
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PPPNDO
      - rhea: RHEA:20357
      - sbo: SBO:0000176
  - !!omap
    - id: 26DAHtex
    - name: meso-2,6-Diaminoheptanedioate transport via diffusion (extracellular
        to periplasm)
    - metabolites: !!omap
      - 26dap__M_e: -1.0
      - 26dap__M_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 26DAHtex
      - sbo: SBO:0000655
  - !!omap
    - id: HCINNMtex
    - name: 3-hydroxycinnamic acid transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 3hcinnm_e: -1.0
      - 3hcinnm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HCINNMtex
      - sbo: SBO:0000655
  - !!omap
    - id: HPPPNtex
    - name: 3-(3-hydroxyphenyl)propionate transport via diffusion (extracellular
        to periplasm)
    - metabolites: !!omap
      - 3hpppn_e: -1.0
      - 3hpppn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HPPPNtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACtex
    - name: Acetate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ac_e: -1.0
      - ac_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACALDtex
    - name: acetaldehyde transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - acald_e: -1.0
      - acald_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACALDtex
      - sbo: SBO:0000655
  - !!omap
    - id: CHRPL
    - name: Chorismate pyruvate lyase
    - metabolites: !!omap
      - 4hbz_c: 1.0
      - chor_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04525 or MNJNJBIH_01233
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CHRPL
      - rhea: RHEA:16505
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__TDPAGTA
    - name: DTDP-4-amino-4,6-dideoxy-D-glucose transaminase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dtdp4addg_c: 1.0
      - akg_c: 1.0
      - dtdp4d6dg_c: -1.0
      - glu__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04220
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TDPAGTA
      - sbo: SBO:0000176
  - !!omap
    - id: UACMAMO
    - name: UDP-N-acetyl-D-mannosamine oxidoreductase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 3.0
      - nad_c: -2.0
      - nadh_c: 2.0
      - uacmam_c: -1.0
      - uacmamu_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04216
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UACMAMO
      - rhea: RHEA:25780
      - sbo: SBO:0000176
  - !!omap
    - id: FBA3
    - name: Sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
    - metabolites: !!omap
      - dhap_c: 1.0
      - e4p_c: 1.0
      - s17bp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03203
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: FBA3
      - rhea: RHEA:30167
      - sbo: SBO:0000176
  - !!omap
    - id: PMPK
    - name: phosphomethylpyrimidine kinase
    - metabolites: !!omap
      - 2mahmp_c: 1.0
      - 4ampm_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02287
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PMPK
      - rhea: RHEA:19893
      - sbo: SBO:0000176
  - !!omap
    - id: LCADi
    - name: lactaldehyde dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - lac__L_c: 1.0
      - lald__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01559
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LCADi
      - rhea: RHEA:14277
      - sbo: SBO:0000176
  - !!omap
    - id: ACMANAtex
    - name: N-acetyl-D-mannosamine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - acmana_e: -1.0
      - acmana_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACMANAtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ACMUMtex
    - name: N-acetylmuramate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__acmum_e: -1.0
      - __Ecoli_panGEMs__acmum_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACMUMtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACACT12
    - name: acetyl-CoA C-acyltransferase (tetradecanoyl-CoA) (r)
    - metabolites: !!omap
      - 3ohdcoa_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - tdcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT12
      - rhea: RHEA:18161
      - sbo: SBO:0000176
  - !!omap
    - id: PSP_L
    - name: phosphoserine phosphatase (L-serine)
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - pser_c: -1.0
      - ser__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04865
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: PSP_L
      - rhea: RHEA:21208
      - sbo: SBO:0000176
  - !!omap
    - id: ADK3
    - name: adentylate kinase (GTP)
    - metabolites: !!omap
      - adp_c: 1.0
      - amp_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADK3
      - rhea: RHEA:29863
      - sbo: SBO:0000176
  - !!omap
    - id: GLUDC
    - name: Glutamate Decarboxylase
    - metabolites: !!omap
      - 4abut_c: 1.0
      - co2_c: 1.0
      - glu__L_c: -1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03902 or MNJNJBIH_03902
    - subsystem: Glutamate Metabolism
    - annotation: !!omap
      - biggr: GLUDC
      - rhea: RHEA:17785
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT2r
    - name: acetyl-CoA C-acyltransferase (butanoyl-CoA) (r)
    - metabolites: !!omap
      - 3ohcoa_c: 1.0
      - accoa_c: -1.0
      - btcoa_c: -1.0
      - coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT2r
      - rhea: RHEA:31111
      - sbo: SBO:0000176
  - !!omap
    - id: BSORy
    - name: Biotin sulfoxide reductase
    - metabolites: !!omap
      - btn_c: 1.0
      - btnso_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03949
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: BSORy
      - rhea: RHEA:30535
      - sbo: SBO:0000176
  - !!omap
    - id: DMSOR2
    - name: Dimethyl sulfoxide reductase (Demethylmenaquinol 8)
    - metabolites: !!omap
      - 2dmmq8_c: 1.0
      - 2dmmql8_c: -1.0
      - dms_c: 1.0
      - dmso_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00999 and MNJNJBIH_01000 and MNJNJBIH_00998
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: DMSOR2
      - rhea: RHEA:30587
      - sbo: SBO:0000176
  - !!omap
    - id: ADSK
    - name: adenylyl-sulfate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - aps_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - paps_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03009
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: ADSK
      - rhea: RHEA:24152
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT3r
    - name: acetyl-CoA C-acyltransferase (hexanoyl-CoA) (r)
    - metabolites: !!omap
      - 3oocoa_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - hxcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT3r
      - rhea: RHEA:31203
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT4r
    - name: acetyl-CoA C-acyltransferase (octanoyl-CoA) (r)
    - metabolites: !!omap
      - 3odcoa_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - octcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT4r
      - rhea: RHEA:31087
      - sbo: SBO:0000176
  - !!omap
    - id: SUCCt2_2pp
    - name: succinate transport via proton symport (2 H) (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - succ_c: 1.0
      - succ_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03918 or MNJNJBIH_00023
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCCt2_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCFUMtpp
    - name: succinate:fumarate antiporter (periplasm)
    - metabolites: !!omap
      - fum_c: 1.0
      - fum_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04609 or MNJNJBIH_00673 or MNJNJBIH_04628
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCFUMtpp
      - sbo: SBO:0000655
  - !!omap
    - id: HSDy
    - name: homoserine dehydrogenase (NADPH)
    - metabolites: !!omap
      - aspsa_c: 1.0
      - h_c: 1.0
      - hom__L_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00013
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: HSDy
      - rhea: RHEA:15761
      - sbo: SBO:0000176
  - !!omap
    - id: CYSTL
    - name: cystathionine b-lyase
    - metabolites: !!omap
      - cyst__L_c: -1.0
      - h2o_c: -1.0
      - hcys__L_c: 1.0
      - nh4_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03321 or MNJNJBIH_01748
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: CYSTL
      - rhea: RHEA:13965
      - sbo: SBO:0000176
  - !!omap
    - id: ACMAMUT
    - name: UDP-N-acetyl-D-mannosaminuronic acid transferase
    - metabolites: !!omap
      - h_c: 1.0
      - uacmamu_c: -1.0
      - udp_c: 1.0
      - unaga_c: -1.0
      - unagamu_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04224
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: ACMAMUT
      - rhea: RHEA:28366
      - sbo: SBO:0000176
  - !!omap
    - id: SHSL1
    - name: O-succinylhomoserine lyase (L-cysteine)
    - metabolites: !!omap
      - cys__L_c: -1.0
      - cyst__L_c: 1.0
      - h_c: 1.0
      - succ_c: 1.0
      - suchms_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04397
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: SHSL1
      - rhea: RHEA:20397
      - sbo: SBO:0000176
  - !!omap
    - id: SSALy
    - name: succinate-semialdehyde dehydrogenase (NADP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - succ_c: 1.0
      - sucsal_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01679
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SSALy
      - rhea: RHEA:13213
      - sbo: SBO:0000176
  - !!omap
    - id: SULabcpp
    - name: sulfate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - so4_c: 1.0
      - so4_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05038 and MNJNJBIH_05039 and MNJNJBIH_00834
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SULabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: TARTRt7pp
    - name: Tartrate/succinate antiporter (periplasm)
    - metabolites: !!omap
      - succ_c: -1.0
      - succ_p: 1.0
      - tartr__L_c: 1.0
      - tartr__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03380
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TARTRt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_dad_2_e
    - name: Exchange of 2'-deoxyadenosine.
    - metabolites: !!omap
      - dad_2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dad_2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ser__D_e
    - name: Exchange of D-serine zwitterion.
    - metabolites: !!omap
      - ser__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ser__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gam6p_e
    - name: Exchange of alpha-D-glucosamine 6-phosphate(1-).
    - metabolites: !!omap
      - gam6p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gam6p_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_15dap_e
    - name: Exchange of cadaverine(2+).
    - metabolites: !!omap
      - 15dap_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_15dap_e
      - sbo: SBO:0000627
  - !!omap
    - id: AB6PGH
    - name: Arbutin 6-phosphate glucohydrolase
    - metabolites: !!omap
      - arbt6p_c: -1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
      - hqn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03176 or MNJNJBIH_04151 or MNJNJBIH_02964
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: AB6PGH
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ocdcea_e
    - name: Exchange of oleate.
    - metabolites: !!omap
      - ocdcea_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ocdcea_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cynt_e
    - name: Cyanate exchange
    - metabolites: !!omap
      - cynt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cynt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_galctn__D_e
    - name: Exchange of D-galactonate.
    - metabolites: !!omap
      - galctn__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galctn__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__AMALT1
    - name: Amylomaltase (maltotriose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malttr_c: -1.0
      - __Ecoli_panGEMs__maltttr_c: 1.0
      - glc__D_c: 1.0
      - malt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03778
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AMALT1
      - sbo: SBO:0000176
  - !!omap
    - id: EX_glyb_e
    - name: Exchange of glycine betaine.
    - metabolites: !!omap
      - glyb_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyb_e
      - sbo: SBO:0000627
  - !!omap
    - id: AHGDx
    - name: (S)-alpha-hydroxyglutarate dehydrogenase
    - metabolites: !!omap
      - akg_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - s2hydog_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03189
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: AHGDx
      - rhea: RHEA:57172
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTP2
    - name: Maltodextrin phosphorylase (maltohexaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthx_c: -1.0
      - __Ecoli_panGEMs__maltpt_c: 1.0
      - g1p_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03779
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTP2
      - sbo: SBO:0000176
  - !!omap
    - id: THMDt2pp
    - name: thymidine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - thymd_c: 1.0
      - thymd_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03243 or MNJNJBIH_02590
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THMDt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: BSORx
    - name: Biotin sulfoxide reductase
    - metabolites: !!omap
      - btn_c: 1.0
      - btnso_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03949
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: BSORx
      - rhea: RHEA:30531
      - sbo: SBO:0000176
  - !!omap
    - id: PACCOAL
    - name: phenylacetate-CoA ligase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - pac_c: -1.0
      - phaccoa_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01540
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PACCOAL
      - rhea: RHEA:20956
      - sbo: SBO:0000176
  - !!omap
    - id: NMNt7pp
    - name: NMN transport via NMN glycohydrolase (periplasm)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ncam_c: 1.0
      - nmn_p: -1.0
      - r5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: NMNt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_ca2_e
    - name: Exchange of calcium(2+).
    - metabolites: !!omap
      - ca2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ca2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_so3_e
    - name: Sulfite exchange
    - metabolites: !!omap
      - so3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_so3_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLUtex
    - name: L-glutamate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glu__L_e: -1.0
      - glu__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLUtex
      - sbo: SBO:0000655
  - !!omap
    - id: Kt2pp
    - name: potassium transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - k_c: 1.0
      - k_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04288 and MNJNJBIH_01448 and MNJNJBIH_03635)
        or MNJNJBIH_01390 or MNJNJBIH_04177
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: Kt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYtex
    - name: Glycine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gly_e: -1.0
      - gly_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYtex
      - sbo: SBO:0000655
  - !!omap
    - id: GP4GH
    - name: Gp4G hydrolase
    - metabolites: !!omap
      - gdp_c: 2.0
      - gp4g_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00074
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GP4GH
      - rhea: RHEA:30203
      - sbo: SBO:0000176
  - !!omap
    - id: GLYALDtex
    - name: Glyceraldehyde transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glyald_e: -1.0
      - glyald_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYALDtex
      - sbo: SBO:0000655
  - !!omap
    - id: AKGt2rpp
    - name: 2-oxoglutarate reversible transport via symport (periplasm)
    - metabolites: !!omap
      - akg_c: 1.0
      - akg_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02832
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: AKGt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: ACGAMT
    - name: UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine 
        -1-phosphate transferase
    - metabolites: !!omap
      - uacgam_c: -1.0
      - udcpp_c: -1.0
      - ump_c: 1.0
      - unaga_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04213
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: ACGAMT
      - rhea: RHEA:28090
      - sbo: SBO:0000176
  - !!omap
    - id: XYLt2pp
    - name: D-xylose transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - xyl__D_c: 1.0
      - xyl__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04514
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: XYLt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_ascb__L_e
    - name: L-Ascorbate exchange
    - metabolites: !!omap
      - ascb__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ascb__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLYBtex
    - name: Glycine betaine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glyb_e: -1.0
      - glyb_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYBtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCtex
    - name: glycerol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glyc_e: -1.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYCtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYC3Ptex
    - name: Glycerol-3-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - glyc3p_e: -1.0
      - glyc3p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYC3Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCLTtex
    - name: glycolate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glyclt_e: -1.0
      - glyclt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYCLTtex
      - sbo: SBO:0000655
  - !!omap
    - id: GTPtex
    - name: GTP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gtp_e: -1.0
      - gtp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GTPtex
      - sbo: SBO:0000655
  - !!omap
    - id: GUAtex
    - name: Guanine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gua_e: -1.0
      - gua_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: GUAtex
      - sbo: SBO:0000655
  - !!omap
    - id: Htex
    - name: proton transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - h_e: -1.0
      - h_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: Htex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_ala_B_e
    - name: Exchange of beta-alanine zwitterion.
    - metabolites: !!omap
      - ala_B_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ala_B_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_agm_e
    - name: Exchange of agmatinium(2+).
    - metabolites: !!omap
      - agm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_agm_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_minohp_e
    - name: Exchange of myo-inositol hexakisphosphate(12-).
    - metabolites: !!omap
      - minohp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_minohp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ppt_e
    - name: Phosphonate exchange
    - metabolites: !!omap
      - ppt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ppt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_hxa_e
    - name: Exchange of hexanoate.
    - metabolites: !!omap
      - hxa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hxa_e
      - sbo: SBO:0000627
  - !!omap
    - id: H2tex
    - name: hydrogen transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - h2_e: -1.0
      - h2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: H2tex
      - sbo: SBO:0000655
  - !!omap
    - id: H2Otex
    - name: H2O transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - h2o_e: -1.0
      - h2o_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04319 or MNJNJBIH_01482 or MNJNJBIH_01069 or 
        MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01514 or MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: H2Otex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AADDGT
    - name: DTDP-N-4-acetamido-4,6-dideoxy-D-galactose transferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dtdp4aaddg_c: -1.0
      - dtdp_c: 1.0
      - h_c: 1.0
      - unagamu_c: -1.0
      - unagamuf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04222
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AADDGT
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAL160t2pp
    - name: fatty-acid-CoA ligase (hexadecanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - hdca_p: -1.0
      - pmtcoa_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01841 or MNJNJBIH_01952
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL160t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAL180t2pp
    - name: fatty-acid-CoA ligase (octadecanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - ocdca_p: -1.0
      - ppi_c: 1.0
      - stcoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01841 or MNJNJBIH_01952
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL180t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: SPODMpp
    - name: superoxide dismutase
    - metabolites: !!omap
      - h2o2_p: 1.0
      - h_p: -2.0
      - o2_p: 1.0
      - o2s_p: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01777
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: SPODMpp
      - rhea: RHEA:20696
      - sbo: SBO:0000176
  - !!omap
    - id: EX_lyx__L_e
    - name: Exchange of L-lyxopyranose.
    - metabolites: !!omap
      - lyx__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lyx__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__acmum_e
    - name: N-Acetylmuramate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__acmum_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__acmum_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_dca_e
    - name: Exchange of decanoate.
    - metabolites: !!omap
      - dca_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dca_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_all__D_e
    - name: Exchange of aldehydo-D-allose.
    - metabolites: !!omap
      - all__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_all__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__NO3R1bpp
    - name: Nitrate reductase (Ubiquinol-8)
    - metabolites: !!omap
      - h2o_p: 1.0
      - no2_p: 1.0
      - no3_p: -1.0
      - q8_c: 1.0
      - q8h2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01361
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__NO3R1bpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_octa_e
    - name: Exchange of octanoate.
    - metabolites: !!omap
      - octa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_octa_e
      - sbo: SBO:0000627
  - !!omap
    - id: PHYTSpp
    - name: Phytase (periplasm)
    - metabolites: !!omap
      - h2o_p: -6.0
      - inost_p: 1.0
      - minohp_p: -1.0
      - pi_p: 6.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01099
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PHYTSpp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_gbbtn_e
    - name: Exchange of 4-(trimethylammonio)butanoate.
    - metabolites: !!omap
      - gbbtn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gbbtn_e
      - sbo: SBO:0000627
  - !!omap
    - id: PPTHpp
    - name: Phosphonate hydrogenase (periplasm)
    - metabolites: !!omap
      - h2_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
      - ppt_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00423
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: PPTHpp:2
      - sbo: SBO:0000176
  - !!omap
    - id: PYRt2rpp
    - name: pyruvate reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - pyr_c: 1.0
      - pyr_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PYRt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__NO3R2pp
    - name: Nitrate reductase (Menaquinol-8) (periplasm)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - h_p: 2.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - no2_c: 1.0
      - no3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01615 and MNJNJBIH_01616 and MNJNJBIH_01614 
        and MNJNJBIH_01613) or (MNJNJBIH_01362 and MNJNJBIH_01365 and 
        MNJNJBIH_01364 and MNJNJBIH_01363)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__NO3R2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_xylu__L_e
    - name: Exchange of L-xylulose.
    - metabolites: !!omap
      - xylu__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xylu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gdp_e
    - name: Exchange of GDP(3-).
    - metabolites: !!omap
      - gdp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gdp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gtp_e
    - name: Exchange of GTP(4-).
    - metabolites: !!omap
      - gtp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gtp_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTP3pp
    - name: nucleoside-triphosphatase (GTP) (periplasm)
    - metabolites: !!omap
      - gdp_p: 1.0
      - gtp_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01099
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTP3pp
      - rhea: RHEA:19669
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__NO3R2bpp
    - name: Nitrate reductase (Menaquinol-8) (periplasm)
    - metabolites: !!omap
      - h2o_p: 1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - no2_p: 1.0
      - no3_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02396 and MNJNJBIH_02393) and MNJNJBIH_02392
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__NO3R2bpp
      - sbo: SBO:0000655
  - !!omap
    - id: THMDt2pp:2
    - name: thymidine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - thymd_c: 1.0
      - thymd_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02606
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THMDt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: THRabcpp
    - name: L-threonine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - thr__L_c: 1.0
      - thr__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03826 and MNJNJBIH_03825 and MNJNJBIH_03830 
        and MNJNJBIH_03827 and MNJNJBIH_03824
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THRabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: TREptspp
    - name: trehalose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - pep_c: -1.0
      - pyr_c: 1.0
      - tre6p_c: 1.0
      - tre_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02619 and MNJNJBIH_04750 and MNJNJBIH_02618 
        and MNJNJBIH_02617
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TREptspp
      - sbo: SBO:0000655
  - !!omap
    - id: THD2pp
    - name: NAD(P) transhydrogenase (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01727 and MNJNJBIH_01728
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: THD2pp
      - sbo: SBO:0000655
  - !!omap
    - id: TMAOR1pp
    - name: Trimethylamine N-oxide reductase (menaquinol 8) (periplasm)
    - metabolites: !!omap
      - h2o_p: 1.0
      - h_p: -1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - tmam_p: 1.0
      - tmao_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01118 and MNJNJBIH_01117) or (MNJNJBIH_02025
        and MNJNJBIH_02026)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: TMAOR1pp
      - sbo: SBO:0000655
  - !!omap
    - id: TMAOR2pp
    - name: Trimethylamine N-oxide reductase (demethylmenaquinol 8) (periplasm)
    - metabolites: !!omap
      - 2dmmq8_c: 1.0
      - 2dmmql8_c: -1.0
      - h2o_p: 1.0
      - h_p: -1.0
      - tmam_p: 1.0
      - tmao_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01118 and MNJNJBIH_01117) or (MNJNJBIH_02025
        and MNJNJBIH_02026)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: TMAOR2pp
      - sbo: SBO:0000655
  - !!omap
    - id: XANtpp
    - name: xanthine reversible transport (periplasm)
    - metabolites: !!omap
      - xan_c: 1.0
      - xan_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: XANtpp
      - sbo: SBO:0000655
  - !!omap
    - id: DAPtex
    - name: 1,5-Diaminopentane transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 15dap_e: -1.0
      - 15dap_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DAPtex
      - sbo: SBO:0000655
  - !!omap
    - id: TRPt2rpp
    - name: L-tryptophan reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - trp__L_c: 1.0
      - trp__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03498 or MNJNJBIH_04139 or MNJNJBIH_00143
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TRPt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: TYRt2rpp
    - name: L-tyrosine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - tyr__L_c: 1.0
      - tyr__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02065 or MNJNJBIH_00143
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TYRt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_tmam_e
    - name: Exchange of trimethylammonium.
    - metabolites: !!omap
      - tmam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tmam_e
      - sbo: SBO:0000627
  - !!omap
    - id: URIt2pp
    - name: uridine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - uri_c: 1.0
      - uri_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02606
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: URIt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: VALabcpp
    - name: L-valine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - val__L_c: 1.0
      - val__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03827 and MNJNJBIH_03826 and MNJNJBIH_03830 
        and MNJNJBIH_03825 and MNJNJBIH_03824
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: VALabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 12PPDStex
    - name: (S)-Propane-1,2-diol transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 12ppd__S_e: -1.0
      - 12ppd__S_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 12PPDStex
      - sbo: SBO:0000655
  - !!omap
    - id: DDGLCNtex
    - name: 2-dehydro-3-deoxy-D-gluconate transport via diffusion (extracellular
        to periplasm)
    - metabolites: !!omap
      - 2ddglcn_e: -1.0
      - 2ddglcn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DDGLCNtex
      - sbo: SBO:0000655
  - !!omap
    - id: XTSNt2rpp
    - name: Xanthosine transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - xtsn_c: 1.0
      - xtsn_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02606
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: XTSNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: XYLabcpp
    - name: D-xylose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - xyl__D_c: 1.0
      - xyl__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03970 and MNJNJBIH_03968 and MNJNJBIH_03969
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: XYLabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GMHEPK
    - name: D-glycero-D-manno-heptose 7-phosphate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gmhep17bp_c: 1.0
      - gmhep7p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03365
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: GMHEPK
      - sbo: SBO:0000176
  - !!omap
    - id: XYLUt2pp
    - name: L-xylulose transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - xylu__L_c: 1.0
      - xylu__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03979 and MNJNJBIH_03980 and MNJNJBIH_03981
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: XYLUt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: THRt4pp
    - name: L-threonine  via sodium symport (periplasm)
    - metabolites: !!omap
      - na1_c: 1.0
      - na1_p: -1.0
      - thr__L_c: 1.0
      - thr__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03417
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THRt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: GALURtex
    - name: D-galacturonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - galur_e: -1.0
      - galur_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALURtex
      - sbo: SBO:0000655
  - !!omap
    - id: GTPCI
    - name: GTP cyclohydrolase I
    - metabolites: !!omap
      - ahdt_c: 1.0
      - for_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02341
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GTPCI
      - rhea: RHEA:17473
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMabcpp
    - name: Ferroxamine transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_c: 1.0
      - __Ecoli_panGEMs__feoxam_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00190 and MNJNJBIH_00191 and MNJNJBIH_00189
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_fruur_e
    - name: Exchange of D-fructofuranuronate.
    - metabolites: !!omap
      - fruur_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fruur_e
      - sbo: SBO:0000627
  - !!omap
    - id: GALtex
    - name: D-galactose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gal_e: -1.0
      - gal_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__malttr_e
    - name: Maltotriose exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__malttr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__malttr_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACACt2pp
    - name: acetoacetate transport via proton symport  (periplasm)
    - metabolites: !!omap
      - acac_c: 1.0
      - acac_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02418
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACACt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ACGAptspp
    - name: N-Acetyl-D-glucosamine transport via PEP:Pyr PTS  (periplasm)
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acgam_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02618 and MNJNJBIH_02619 and MNJNJBIH_02617 
        and MNJNJBIH_01238) or (MNJNJBIH_02617 and MNJNJBIH_02618 and 
        MNJNJBIH_00730)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACGAptspp
      - sbo: SBO:0000655
  - !!omap
    - id: ACMANAptspp
    - name: N-acetyl-D-mannosamine transport via PTS  (periplasm)
    - metabolites: !!omap
      - acmana_p: -1.0
      - acmanap_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02617 and MNJNJBIH_01966 and MNJNJBIH_02618 
        and MNJNJBIH_01965 and MNJNJBIH_01967
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACMANAptspp
      - sbo: SBO:0000655
  - !!omap
    - id: ACNAMt2pp
    - name: N-acetylneuraminate proton symport (periplasm)
    - metabolites: !!omap
      - acnam_c: 1.0
      - acnam_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03565
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACNAMt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GALCTtex
    - name: D-galactarte transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - galct__D_e: -1.0
      - galct__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALCTtex
      - sbo: SBO:0000655
  - !!omap
    - id: GALCTNtex
    - name: D-galactonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - galctn__D_e: -1.0
      - galctn__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALCTNtex
      - sbo: SBO:0000655
  - !!omap
    - id: GALTtex
    - name: Galactitol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - galt_e: -1.0
      - galt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALTtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cbi_e
    - name: Cobinamide exchange
    - metabolites: !!omap
      - cbi_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cbi_e
      - sbo: SBO:0000627
  - !!omap
    - id: CHOLD
    - name: choline dehydrogenase
    - metabolites: !!omap
      - betald_c: 1.0
      - chol_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00328
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: CHOLD
      - rhea: RHEA:33051
      - sbo: SBO:0000176
  - !!omap
    - id: TRE6PS
    - name: alpha,alpha-trehalose-phosphate synthase (UDP-forming)
    - metabolites: !!omap
      - g6p_c: -1.0
      - h_c: 1.0
      - tre6p_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02055
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TRE6PS
      - rhea: RHEA:18889
      - sbo: SBO:0000176
  - !!omap
    - id: DRPA
    - name: deoxyribose-phosphate aldolase
    - metabolites: !!omap
      - 2dr5p_c: -1.0
      - acald_c: 1.0
      - g3p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04853
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DRPA
      - sbo: SBO:0000176
  - !!omap
    - id: TKT2
    - name: transketolase
    - metabolites: !!omap
      - e4p_c: -1.0
      - f6p_c: 1.0
      - g3p_c: 1.0
      - xu5p__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03213
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: TKT2
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__arbtn_fe3_e
    - name: Aerobactin exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__arbtn_fe3_e
      - sbo: SBO:0000627
  - !!omap
    - id: UDCPDP
    - name: undecaprenyl-diphosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - udcpdp_c: -1.0
      - udcpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00933 or MNJNJBIH_01431 or MNJNJBIH_03374
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UDCPDP
      - rhea: RHEA:28094
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__cpgn_e
    - name: Coprogen exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__cpgn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ch4_e
    - name: Exchange of methane.
    - metabolites: !!omap
      - ch4_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ch4_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_adocbl_e
    - name: Exchange of cobamamide.
    - metabolites: !!omap
      - adocbl_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_adocbl_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__FECRMabcpp
    - name: Ferrichrome transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_c: 1.0
      - __Ecoli_panGEMs__fecrm_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00191 and MNJNJBIH_00190 and MNJNJBIH_00189
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: TREH
    - name: alpha,alpha-trehalase
    - metabolites: !!omap
      - glc__D_c: 2.0
      - h2o_c: -1.0
      - tre_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03906
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TREH
      - sbo: SBO:0000176
  - !!omap
    - id: GAMtex
    - name: D-glucosamine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gam_e: -1.0
      - gam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GAMtex
      - sbo: SBO:0000655
  - !!omap
    - id: GBBTNtex
    - name: gamma-butyrobetaine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - gbbtn_e: -1.0
      - gbbtn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GBBTNtex
      - sbo: SBO:0000655
  - !!omap
    - id: ATPS4rpp
    - name: ATP synthase (four protons for one ATP) (periplasm)
    - metabolites: !!omap
      - adp_c: -1.0
      - atp_c: 1.0
      - h2o_c: 1.0
      - h_c: 3.0
      - h_p: -4.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04169 and (MNJNJBIH_04161 and MNJNJBIH_04163
        and MNJNJBIH_04165 and MNJNJBIH_04164 and MNJNJBIH_04162) and 
        (MNJNJBIH_04168 and MNJNJBIH_04166 and MNJNJBIH_04167)) or 
        ((MNJNJBIH_04161 and MNJNJBIH_04163 and MNJNJBIH_04165 and 
        MNJNJBIH_04164 and MNJNJBIH_04162) and (MNJNJBIH_04168 and 
        MNJNJBIH_04166 and MNJNJBIH_04167))
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: ATPS4rpp
      - sbo: SBO:0000655
  - !!omap
    - id: INDOLEtex
    - name: Indole transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - indole_e: -1.0
      - indole_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: INDOLEtex
      - sbo: SBO:0000655
  - !!omap
    - id: ARBt2rpp
    - name: L-arabinose transport via proton symport (periplasm)
    - metabolites: !!omap
      - arab__L_c: 1.0
      - arab__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03102
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARBt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTK1
    - name: cytidylate kinase (CMP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cdp_c: 1.0
      - cmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01014
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CYTK1
      - rhea: RHEA:11600
      - sbo: SBO:0000176
  - !!omap
    - id: DAPabcpp
    - name: M-diaminopimelic acid ABC transport (periplasm)
    - metabolites: !!omap
      - 26dap__M_c: 1.0
      - 26dap__M_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DAPabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: L_LACtex
    - name: L-lactate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - lac__L_e: -1.0
      - lac__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: L_LACtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACt4pp
    - name: Na+/Acetate symport (periplasm)
    - metabolites: !!omap
      - ac_c: 1.0
      - ac_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04563
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: ADEt2rpp
    - name: adenine transport via proton symport (reversible) (periplasm)
    - metabolites: !!omap
      - ade_c: 1.0
      - ade_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04067 or MNJNJBIH_04144 or MNJNJBIH_04087
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ADEt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: DHAtpp
    - name: Dihydroxyacetone transport via facilitated diffusion (periplasm)
    - metabolites: !!omap
      - dha_c: 1.0
      - dha_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DHAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: DMSOR1pp
    - name: Dimethyl sulfoxide reductase (Menaquinol 8) (periplasm)
    - metabolites: !!omap
      - dms_p: 1.0
      - dmso_p: -1.0
      - h2o_p: 1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02025 and MNJNJBIH_02026
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: DMSOR1pp
      - sbo: SBO:0000655
  - !!omap
    - id: ARGabcpp
    - name: L-arginine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - arg__L_c: 1.0
      - arg__L_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02510 and MNJNJBIH_02508 and MNJNJBIH_02512 
        and MNJNJBIH_02509) or (MNJNJBIH_00960 and MNJNJBIH_00955 and 
        MNJNJBIH_00959 and MNJNJBIH_00957 and MNJNJBIH_00956)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARGabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ADNt2pp
    - name: adenosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - adn_c: 1.0
      - adn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03243 or MNJNJBIH_02590
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ADNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ADNt2pp:2
    - name: adenosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - adn_c: 1.0
      - adn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02606
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ADNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ALAabcpp
    - name: L-alanine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - ala__L_c: 1.0
      - ala__L_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03824 and MNJNJBIH_03826 and MNJNJBIH_03825 
        and MNJNJBIH_03830 and MNJNJBIH_03827
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ALLTNt2rpp
    - name: allantoin transport in via proton symport (periplasm)
    - metabolites: !!omap
      - alltn_c: 1.0
      - alltn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00564
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALLTNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: ARBabcpp
    - name: L-arabinose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - arab__L_c: 1.0
      - arab__L_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02057 and MNJNJBIH_02059 and MNJNJBIH_02058
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARBabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ARGAGMt7pp
    - name: Arginine/agmatine antiport (periplasm)
    - metabolites: !!omap
      - agm_c: -1.0
      - agm_p: 1.0
      - arg__L_c: 1.0
      - arg__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04599
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARGAGMt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ASCBptspp
    - name: L-ascorbate transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ascb6p_c: 1.0
      - ascb__L_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04700 and MNJNJBIH_04698 and MNJNJBIH_02617 
        and MNJNJBIH_02618 and MNJNJBIH_04699
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ASCBptspp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTK2
    - name: cytidylate kinase (dCMP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dcdp_c: 1.0
      - dcmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01014
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CYTK2
      - rhea: RHEA:25094
      - sbo: SBO:0000176
  - !!omap
    - id: ASNt2rpp
    - name: L-asparagine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - asn__L_c: 1.0
      - asn__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01601
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: ASPabcpp
    - name: L-aspartate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00707 and MNJNJBIH_00705 and MNJNJBIH_00708 
        and MNJNJBIH_00706
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASPabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ASPt2pp
    - name: L-aspartate transport in via proton symport (periplasm)
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04576
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASPt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ECOAH8
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxyoctadecanoyl-CoA)
    - metabolites: !!omap
      - 3hodcoa_c: -1.0
      - h2o_c: 1.0
      - od2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH8
      - rhea: RHEA:78603
      - sbo: SBO:0000176
  - !!omap
    - id: GLCDpp
    - name: Glucose dehydrogenase (ubiquinone-8 as acceptor) (periplasm)
    - metabolites: !!omap
      - glc__D_p: -1.0
      - glcn_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00160 or MNJNJBIH_00929
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: GLCDpp
      - sbo: SBO:0000655
  - !!omap
    - id: GUAtpp
    - name: Guanine transport via diffusion (periplasm)
    - metabolites: !!omap
      - gua_c: 1.0
      - gua_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03157 or MNJNJBIH_04558
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GUAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: ASPt2_2pp
    - name: Aspartate transport via proton symport (2 H) (periplasm)
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - h_c: 2.0
      - h_p: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03918
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASPt2_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: HYD2pp
    - name: 'Hydrogenase (menaquinone8: 2 protons) (periplasm)'
    - metabolites: !!omap
      - h2_c: -1.0
      - h_c: -2.0
      - h_p: 2.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03306 and MNJNJBIH_03310 and MNJNJBIH_03309 
        and MNJNJBIH_03308
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: HYD2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GK1
    - name: guanylate kinase (GMP:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gdp_c: 1.0
      - gmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04059
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GK1
      - rhea: RHEA:20780
      - sbo: SBO:0000176
  - !!omap
    - id: HYXNtpp
    - name: Hypoxanthine transport (periplasm)
    - metabolites: !!omap
      - hxan_c: 1.0
      - hxan_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04558 or MNJNJBIH_03157
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HYXNtpp
      - sbo: SBO:0000655
  - !!omap
    - id: NACtpp
    - name: Nicotinic acid uptake (periplasm)
    - metabolites: !!omap
      - nac_c: 1.0
      - nac_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: NACtpp
      - sbo: SBO:0000655
  - !!omap
    - id: ASPt2_3pp
    - name: L-asparate transport via proton symport (3 H) (periplasm)
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - h_c: 3.0
      - h_p: -3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04628 or MNJNJBIH_04609
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASPt2_3pp
      - sbo: SBO:0000655
  - !!omap
    - id: HIStex
    - name: L-histidine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - his__L_e: -1.0
      - his__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HIStex
      - sbo: SBO:0000655
  - !!omap
    - id: HXAtex
    - name: Hexanoate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - hxa_e: -1.0
      - hxa_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HXAtex
      - sbo: SBO:0000655
  - !!omap
    - id: HACD1i
    - name: 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
    - metabolites: !!omap
      - 3hbcoa_c: 1.0
      - aacoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD1i
      - rhea: RHEA:30799
      - sbo: SBO:0000176
  - !!omap
    - id: HYXNtex
    - name: Hypoxanthine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - hxan_e: -1.0
      - hxan_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HYXNtex
      - sbo: SBO:0000655
  - !!omap
    - id: IDONtex
    - name: L-idonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - idon__L_e: -1.0
      - idon__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: IDONtex
      - sbo: SBO:0000655
  - !!omap
    - id: ILEtex
    - name: L-isoleucine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ile__L_e: -1.0
      - ile__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ILEtex
      - sbo: SBO:0000655
  - !!omap
    - id: INSTtex
    - name: inositol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - inost_e: -1.0
      - inost_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: INSTtex
      - sbo: SBO:0000655
  - !!omap
    - id: INStex
    - name: inosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ins_e: -1.0
      - ins_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: INStex
      - sbo: SBO:0000655
  - !!omap
    - id: Ktex
    - name: potassium transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - k_e: -1.0
      - k_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: Ktex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CPGNtonex
    - name: Coprogen transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_e: -1.0
      - __Ecoli_panGEMs__cpgn_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01239 and (MNJNJBIH_01392 and MNJNJBIH_03319 
        and MNJNJBIH_03320)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNtonex
      - sbo: SBO:0000655
  - !!omap
    - id: GLCRtex
    - name: D-glucarate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glcr_e: -1.0
      - glcr_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLCRtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLCNtex
    - name: D-gluconate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glcn_e: -1.0
      - glcn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLCNtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLCURtex
    - name: D-glucuronat transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glcur_e: -1.0
      - glcur_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLCURtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLNtex
    - name: L-glutamine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gln__L_e: -1.0
      - gln__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLNtex
      - sbo: SBO:0000655
  - !!omap
    - id: O2tex
    - name: oxygen transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - o2_e: -1.0
      - o2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: O2tex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_prpnte_e
    - name: Exchange of propionate.
    - metabolites: !!omap
      - prpnte_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_prpnte_e
      - sbo: SBO:0000627
  - !!omap
    - id: HACD2i
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)
    - metabolites: !!omap
      - 3hhcoa_c: 1.0
      - 3ohcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD2i
      - rhea: RHEA:31143
      - sbo: SBO:0000176
  - !!omap
    - id: OCTAtex
    - name: Octanoate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - octa_e: -1.0
      - octa_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: OCTAtex
      - sbo: SBO:0000655
  - !!omap
    - id: D_LACtex
    - name: D-lactate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - lac__D_e: -1.0
      - lac__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: D_LACtex
      - sbo: SBO:0000655
  - !!omap
    - id: NTD8pp
    - name: 5'-nucleotidase (dGMP)
    - metabolites: !!omap
      - dgmp_p: -1.0
      - dgsn_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00531
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD8pp
      - rhea: RHEA:29379
      - sbo: SBO:0000176
  - !!omap
    - id: ORNtex
    - name: ornithine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - orn__L_e: -1.0
      - orn__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ORNtex
      - sbo: SBO:0000655
  - !!omap
    - id: FRULYStex
    - name: fructoselysine transporter via diffusion (extracellular)
    - metabolites: !!omap
      - frulys_e: -1.0
      - frulys_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FRULYStex
      - sbo: SBO:0000655
  - !!omap
    - id: MALTtexi
    - name: maltoseMaltotriose transport via diffusion (extracellular to 
        periplasm) irreversible
    - metabolites: !!omap
      - malt_e: -1.0
      - malt_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: MALTtexi
      - sbo: SBO:0000655
  - !!omap
    - id: ECOAH5
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxydodecanoyl-CoA)
    - metabolites: !!omap
      - 3hddcoa_c: -1.0
      - dd2coa_c: 1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH5
      - rhea: RHEA:31075
      - sbo: SBO:0000176
  - !!omap
    - id: DHFS
    - name: dihydrofolate synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dhf_c: 1.0
      - dhpt_c: -1.0
      - glu__L_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02517
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHFS
      - rhea: RHEA:23584
      - sbo: SBO:0000176
  - !!omap
    - id: CITt7pp
    - name: Citrate transport via succinate antiport (periplasm)
    - metabolites: !!omap
      - cit_c: 1.0
      - cit_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00664
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CITt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: CRNt7pp
    - name: Carnitine/butyrobetaine antiporter (periplasm)
    - metabolites: !!omap
      - crn_c: 1.0
      - crn_p: -1.0
      - gbbtn_c: -1.0
      - gbbtn_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00063
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CRNt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_ni2_e
    - name: Exchange of nickel(2+).
    - metabolites: !!omap
      - ni2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ni2_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLCtex
    - name: glucose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glc__D_e: -1.0
      - glc__D_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: GLCtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_no_e
    - name: Exchange of nitric oxide.
    - metabolites: !!omap
      - no_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_no_e
      - sbo: SBO:0000627
  - !!omap
    - id: DGSNt2pp
    - name: deoxyguanosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - dgsn_c: 1.0
      - dgsn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DGSNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: DINSt2pp
    - name: deoxyinosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - din_c: 1.0
      - din_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DINSt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: DURIt2pp
    - name: deoxyuridine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - duri_c: 1.0
      - duri_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02590 or MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DURIt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FE2abcpp
    - name: iron (II) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fe2_c: 1.0
      - fe2_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03771
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FE2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: FRUptspp
    - name: D-fructose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - f1p_c: 1.0
      - fru_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02617 and MNJNJBIH_02355 and MNJNJBIH_02357 
        and MNJNJBIH_02618
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FRUptspp
      - sbo: SBO:0000655
  - !!omap
    - id: FUCtpp
    - name: L-fucose transport via proton symport (periplasm)
    - metabolites: !!omap
      - fuc__L_c: 1.0
      - fuc__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03056
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FUCtpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__fad_e
    - name: Exchange of Flavin adenine dinucleotide oxidized
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fad_e
      - sbo: SBO:0000627
  - !!omap
    - id: GALCTt2rpp
    - name: D-galactarte transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - galct__D_c: 1.0
      - galct__D_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03044 or MNJNJBIH_03455
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALCTt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: GALt2pp
    - name: D-galactose transport in via proton symport (periplasm)
    - metabolites: !!omap
      - gal_c: 1.0
      - gal_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03220
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ASPtex
    - name: L-aspartate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - asp__L_e: -1.0
      - asp__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ASPtex
      - sbo: SBO:0000655
  - !!omap
    - id: ABUTt2pp
    - name: 4-aminobutyrate transport in via proton symport (periplasm)
    - metabolites: !!omap
      - 4abut_c: 1.0
      - 4abut_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02899
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ABUTt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FUMt2_2pp
    - name: Fumarate transport via proton symport (2 H) (periplasm)
    - metabolites: !!omap
      - fum_c: 1.0
      - fum_p: -1.0
      - h_c: 2.0
      - h_p: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03918
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FUMt2_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FUMt2_3pp
    - name: Fumarate transport via proton symport (3 H) (periplasm)
    - metabolites: !!omap
      - fum_c: 1.0
      - fum_p: -1.0
      - h_c: 3.0
      - h_p: -3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04628 or MNJNJBIH_04609 or MNJNJBIH_00673
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FUMt2_3pp
      - sbo: SBO:0000655
  - !!omap
    - id: PHEtex
    - name: L-phenylalanine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - phe__L_e: -1.0
      - phe__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PHEtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERtonex
    - name: Fe-enterobactin transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_e: -1.0
      - __Ecoli_panGEMs__feenter_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00622 and (MNJNJBIH_01392 and MNJNJBIH_03319 
        and MNJNJBIH_03320)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERtonex
      - sbo: SBO:0000655
  - !!omap
    - id: CSNt2pp
    - name: cytosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - csn_c: 1.0
      - csn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00369
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CSNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: CYNTt2pp
    - name: Cyanate transport via proton symport (periplasm)
    - metabolites: !!omap
      - cynt_c: 1.0
      - cynt_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00376
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYNTt2pp:2
      - sbo: SBO:0000655
  - !!omap
    - id: PItex
    - name: phosphate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - pi_e: -1.0
      - pi_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PItex
      - sbo: SBO:0000655
  - !!omap
    - id: TREHpp
    - name: alpha,alpha-trehalase (periplasm)
    - metabolites: !!omap
      - glc__D_p: 2.0
      - h2o_p: -1.0
      - tre_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01329
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TREHpp
      - sbo: SBO:0000176
  - !!omap
    - id: CYTBDpp
    - name: 'cytochrome oxidase bd (ubiquinol-8: 2 protons) (periplasm)'
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - h_p: 2.0
      - o2_c: -0.5
      - q8_c: 1.0
      - q8h2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01096 and MNJNJBIH_01097) or (MNJNJBIH_00800
        and MNJNJBIH_00799 and MNJNJBIH_00801)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CYTBDpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTDt2pp
    - name: cytidine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - cytd_c: 1.0
      - cytd_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02590 or MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYTDt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTDt2pp:2
    - name: cytidine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - cytd_c: 1.0
      - cytd_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02606
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYTDt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: DADNt2pp
    - name: deoxyadenosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - dad_2_c: 1.0
      - dad_2_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02590 or MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DADNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: DCYTt2pp
    - name: deoxycytidine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - dcyt_c: 1.0
      - dcyt_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02590 or MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DCYTt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTBD2pp
    - name: 'cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm)'
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - h_p: 2.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - o2_c: -0.5
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01096 and MNJNJBIH_01097
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CYTBD2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ACGAMK
    - name: N-acetylglucosamine kinase
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acgam_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01260
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: ACGAMK
      - rhea: RHEA:17417
      - sbo: SBO:0000176
  - !!omap
    - id: ACt2rpp
    - name: acetate reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - ac_c: 1.0
      - ac_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00023
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: DDGLCNt2rpp
    - name: 2-dehydro-3-deoxy-D-gluconate transport via proton symport, 
        reversible (periplasm)
    - metabolites: !!omap
      - 2ddglcn_c: 1.0
      - 2ddglcn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04361
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DDGLCNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: RMNtex
    - name: L-rhamnose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - rmn_e: -1.0
      - rmn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_02410 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: RMNtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_meoh_e
    - name: Exchange of methanol.
    - metabolites: !!omap
      - meoh_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_meoh_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__fe3dcit_e
    - name: Fe(III)dicitrate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dcit_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fe3dcit_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__fe3hox_e
    - name: Fe(III)hydroxamate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fe3hox_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__fecrm_e
    - name: Ferrichrome exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fecrm_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__feenter_e
    - name: Fe-enterobactin exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__feenter_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__feoxam_e
    - name: Ferroxamine exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__feoxam_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MALTTRtexi
    - name: Maltotriose transport via diffusion (extracellular to periplasm) 
        irreversible
    - metabolites: !!omap
      - __Ecoli_panGEMs__malttr_e: -1.0
      - __Ecoli_panGEMs__malttr_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTTRtexi
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MALTTTRtexi
    - name: MaltotetraoseMaltotriose transport via diffusion (extracellular to 
        periplasm) irreversible
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltttr_e: -1.0
      - __Ecoli_panGEMs__maltttr_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTTTRtexi
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MALTPTtexi
    - name: MaltopentaoseMaltotriose transport via diffusion (extracellular to 
        periplasm) irreversible
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltpt_e: -1.0
      - __Ecoli_panGEMs__maltpt_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTPTtexi
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__METS
    - name: Methionine synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__5mthf_c: -1.0
      - h_c: 1.0
      - hcys__L_c: -1.0
      - met__L_c: 1.0
      - thf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04268
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METS
      - sbo: SBO:0000176
  - !!omap
    - id: ASPO3
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - h_c: 1.0
      - iasp_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ASPO3:2
      - rhea: RHEA:28683
      - sbo: SBO:0000176
  - !!omap
    - id: ASPO5
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - fum_c: -1.0
      - h_c: 1.0
      - iasp_c: 1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ASPO5:2
      - rhea: RHEA:30043
      - sbo: SBO:0000176
  - !!omap
    - id: ASPO4
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - h_c: 1.0
      - iasp_c: 1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ASPO4:2
      - rhea: RHEA:29191
      - sbo: SBO:0000176
  - !!omap
    - id: EX_3amp_e
    - name: Exchange of 3'-AMP(2-).
    - metabolites: !!omap
      - 3amp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3amp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_3gmp_e
    - name: Exchange of guanosine 3'-monophosphate(2-).
    - metabolites: !!omap
      - 3gmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3gmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_3ump_e
    - name: Exchange of 3'-UMP(2-).
    - metabolites: !!omap
      - 3ump_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3ump_e
      - sbo: SBO:0000627
  - !!omap
    - id: ASPO6
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - h2o2_c: 1.0
      - h_c: 1.0
      - iasp_c: 1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ASPO6:2
      - rhea: RHEA:25876
      - sbo: SBO:0000176
  - !!omap
    - id: EX_cu2_e
    - name: Exchange of copper(2+).
    - metabolites: !!omap
      - cu2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cu2_e
      - sbo: SBO:0000627
  - !!omap
    - id: LCTStex
    - name: Lactose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - lcts_e: -1.0
      - lcts_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LCTStex
      - sbo: SBO:0000655
  - !!omap
    - id: LEUtex
    - name: L-leucine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - leu__L_e: -1.0
      - leu__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LEUtex
      - sbo: SBO:0000655
  - !!omap
    - id: LYStex
    - name: L-lysine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - lys__L_e: -1.0
      - lys__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LYStex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_glyc__R_e
    - name: Exchange of D-glycerate.
    - metabolites: !!omap
      - glyc__R_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyc__R_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__eca4colipa_e
    - name: (enterobacterial common antigen)x4 core oligosaccharide lipid A 
        exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__eca4colipa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__eca4colipa_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLYOX3
    - name: glyoxalase III
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - lac__D_c: 1.0
      - mthgxl_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02119
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: GLYOX3
      - rhea: RHEA:27754
      - sbo: SBO:0000176
  - !!omap
    - id: LYXtex
    - name: L-Lyxose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - lyx__L_e: -1.0
      - lyx__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LYXtex
      - sbo: SBO:0000655
  - !!omap
    - id: MANtex
    - name: D-mannose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - man_e: -1.0
      - man_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MANtex
      - sbo: SBO:0000655
  - !!omap
    - id: MAN6Ptex
    - name: Mannose 6-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - man6p_e: -1.0
      - man6p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MAN6Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: BUTSO3abcpp
    - name: butanesulfonate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - butso3_c: 1.0
      - butso3_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01043 and MNJNJBIH_01042 and MNJNJBIH_01047
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: BUTSO3abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ETHSO3abcpp
    - name: ethanesulfonate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - eths_c: 1.0
      - eths_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01043 and MNJNJBIH_01042 and MNJNJBIH_01047
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ETHSO3abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MELIBtex
    - name: melibiose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - melib_e: -1.0
      - melib_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MELIBtex
      - sbo: SBO:0000655
  - !!omap
    - id: DMSOtex
    - name: Dimethyl sulfoxide transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - dmso_e: -1.0
      - dmso_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DMSOtex
      - sbo: SBO:0000655
  - !!omap
    - id: DURItex
    - name: deoxyuridine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - duri_e: -1.0
      - duri_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: DURItex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_mal__D_e
    - name: Exchange of (R)-malate(2-).
    - metabolites: !!omap
      - mal__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mal__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: FRUtex
    - name: D-fructose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fru_e: -1.0
      - fru_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FRUtex
      - sbo: SBO:0000655
  - !!omap
    - id: FUCtex
    - name: L-fucose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fuc__L_e: -1.0
      - fuc__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FUCtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_sel_e
    - name: Exchange of selenate.
    - metabolites: !!omap
      - sel_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sel_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_hg2_e
    - name: Exchange of mercury(2+).
    - metabolites: !!omap
      - hg2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hg2_e
      - sbo: SBO:0000627
  - !!omap
    - id: FUMtex
    - name: Fumarate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fum_e: -1.0
      - fum_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FUMtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACACT5r
    - name: acetyl-CoA C-acyltransferase (decanoyl-CoA) (r)
    - metabolites: !!omap
      - 3oddcoa_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - dcacoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04283 or MNJNJBIH_02547
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT5r
      - rhea: RHEA:31183
      - sbo: SBO:0000176
  - !!omap
    - id: PRASCSi
    - name: phosphoribosylaminoimidazolesuccinocarboxamide synthase
    - metabolites: !!omap
      - 25aics_c: 1.0
      - 5aizc_c: -1.0
      - adp_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02685
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: PRASCSi:2
      - rhea: RHEA:22628
      - sbo: SBO:0000176
  - !!omap
    - id: MALTATr
    - name: maltose O-acetyltransferase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acmalt_c: 1.0
      - coa_c: 1.0
      - malt_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00506
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MALTATr
      - rhea: RHEA:10456
      - sbo: SBO:0000176
  - !!omap
    - id: DHBSH
    - name: 2,3-dihydroxybenzoylserine hydrolase
    - metabolites: !!omap
      - 23dhb_c: 1.0
      - 23dhbzs_c: -1.0
      - h2o_c: -1.0
      - ser__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHBSH
      - sbo: SBO:0000176
  - !!omap
    - id: MALDDH
    - name: malate decarboxylating oxidoreductase (decarboxylating)
    - metabolites: !!omap
      - co2_c: 1.0
      - mal__D_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01947
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MALDDH
      - rhea: RHEA:18365
      - sbo: SBO:0000176
  - !!omap
    - id: FE2tex
    - name: iron (II) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fe2_e: -1.0
      - fe2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FE2tex
      - sbo: SBO:0000655
  - !!omap
    - id: NMNtex
    - name: NMN transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - nmn_e: -1.0
      - nmn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NMNtex
      - sbo: SBO:0000655
  - !!omap
    - id: ENTERES
    - name: Enterochelin Esterase
    - metabolites: !!omap
      - 23dhbzs_c: 3.0
      - enter_c: -1.0
      - h2o_c: -3.0
      - h_c: 3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00623
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ENTERES:2
      - rhea: RHEA:28018
      - sbo: SBO:0000176
  - !!omap
    - id: NO2tex
    - name: nitrite transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - no2_e: -1.0
      - no2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NO2tex:2
      - sbo: SBO:0000655
  - !!omap
    - id: HOXPRx
    - name: tartronate semialdehyde reductase
    - metabolites: !!omap
      - 2h3opp_c: -1.0
      - glyc__R_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00563 or MNJNJBIH_03454
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HOXPRx
      - rhea: RHEA:18845
      - sbo: SBO:0000176
  - !!omap
    - id: DHPS2_1
    - name: dihydropteroate synthase
    - metabolites: !!omap
      - 2ahhmd_c: -1.0
      - 4abz_c: -1.0
      - dhpt_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03520
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHPS2_1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMUtex
    - name: Ferroxamine (minus Fe3) secretion (to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_un_e: 1.0
      - __Ecoli_panGEMs__feoxam_un_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMUtex
      - sbo: SBO:0000655
  - !!omap
    - id: ARBTNtpp
    - name: aerobactin secretion (to periplasm)
    - metabolites: !!omap
      - arbtn_c: -1.0
      - arbtn_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ARBTNtpp
      - sbo: SBO:0000655
  - !!omap
    - id: MTHFC_1
    - name: methenyltetrahydrofolate cyclohydrolase
    - metabolites: !!omap
      - 10fthf_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - methf_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00587
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: MTHFC_1
      - rhea: RHEA:23700
      - sbo: SBO:0000176
  - !!omap
    - id: ARBTNtex
    - name: aerobactin secretion (to extracellular)
    - metabolites: !!omap
      - arbtn_e: 1.0
      - arbtn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: ARBTNtex
      - sbo: SBO:0000655
  - !!omap
    - id: MTHFD
    - name: methylenetetrahydrofolate dehydrogenase (NADP)
    - metabolites: !!omap
      - methf_c: 1.0
      - mlthf_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00587
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: MTHFD
      - rhea: RHEA:22812
      - sbo: SBO:0000176
  - !!omap
    - id: LYXI
    - name: Lyxose isomerase
    - metabolites: !!omap
      - lyx__L_c: -1.0
      - xylu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04354
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LYXI
      - rhea: RHEA:28058
      - sbo: SBO:0000176
  - !!omap
    - id: BUTt2rpp
    - name: Butyrate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - but_c: 1.0
      - but_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02418
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: BUTt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: CADVtpp
    - name: Lysine/Cadaverine antiporter (periplasm)
    - metabolites: !!omap
      - 15dap_c: -1.0
      - 15dap_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
      - lys__L_c: 1.0
      - lys__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04621
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CADVtpp
      - sbo: SBO:0000655
  - !!omap
    - id: QULNS_1
    - name: quinolinate synthase
    - metabolites: !!omap
      - dhap_c: -1.0
      - h2o_c: 2.0
      - iasp_c: -1.0
      - pi_c: 1.0
      - quln_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00819
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: QULNS_1:2
      - rhea: RHEA:25888
      - sbo: SBO:0000176
  - !!omap
    - id: 23CAMPtex
    - name: 23cAMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 23camp_e: -1.0
      - 23camp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 23CAMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: 23CCMPtex
    - name: 23cCMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 23ccmp_e: -1.0
      - 23ccmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 23CCMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: 23CUMPtex
    - name: 23cUMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 23cump_e: -1.0
      - 23cump_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 23CUMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: 23CGMPtex
    - name: 23cGMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 23cgmp_e: -1.0
      - 23cgmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 23CGMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: 3AMPtex
    - name: 3AMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 3amp_e: -1.0
      - 3amp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 3AMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: 3CMPtex
    - name: 3CMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 3cmp_e: -1.0
      - 3cmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 3CMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LADGMDH
    - name: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase
    - metabolites: !!omap
      - 26dap__M_c: 1.0
      - LalaDglu_c: 1.0
      - __Ecoli_panGEMs__LalaDgluMdap_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01492
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LADGMDH
      - sbo: SBO:0000176
  - !!omap
    - id: ALKP
    - name: alkaline phosphatase
    - metabolites: !!omap
      - dha_c: 1.0
      - dhap_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02927
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALKP
      - rhea: RHEA:51728
      - sbo: SBO:0000176
  - !!omap
    - id: GDPtex
    - name: GDP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gdp_e: -1.0
      - gdp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GDPtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cobalt2_e
    - name: Exchange of cobalt(2+).
    - metabolites: !!omap
      - cobalt2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cobalt2_e
      - sbo: SBO:0000627
  - !!omap
    - id: ALAGLUE
    - name: L-alanyl-gamma-glutamate epimerase
    - metabolites: !!omap
      - LalaDglu_c: -1.0
      - LalaLglu_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01491
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: ALAGLUE
      - rhea: RHEA:28394
      - sbo: SBO:0000176
  - !!omap
    - id: TMAtex
    - name: Trimethylamine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tmam_e: -1.0
      - tmam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TMAtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_pheme_e
    - name: Exchange of ferroheme b(2-).
    - metabolites: !!omap
      - pheme_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pheme_e
      - sbo: SBO:0000627
  - !!omap
    - id: TMAOtex
    - name: Trimethylamine N-oxide transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - tmao_e: -1.0
      - tmao_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TMAOtex
      - sbo: SBO:0000655
  - !!omap
    - id: TREtex
    - name: trehalose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tre_e: -1.0
      - tre_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TREtex
      - sbo: SBO:0000655
  - !!omap
    - id: L_LACD3
    - name: L-Lactate dehydrogenase (menaquinone)
    - metabolites: !!omap
      - lac__L_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00323 and MNJNJBIH_00325 and MNJNJBIH_00324)
        or MNJNJBIH_04014
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: L_LACD3
      - sbo: SBO:0000176
  - !!omap
    - id: FEENTERtex
    - name: enterochelin transport (secretion periplasm)
    - metabolites: !!omap
      - enter_e: 1.0
      - enter_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03348
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FEENTERtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXUtpp
    - name: Fe(III)hydroxamate unloaded secretion (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_un_e: 1.0
      - __Ecoli_panGEMs__fe3hox_un_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXUtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMUtpp
    - name: Ferroxamine (minus Fe3) secretion (to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_un_c: -1.0
      - __Ecoli_panGEMs__feoxam_un_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMUtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FECRMUtpp
    - name: Ferrichrome (minus Fe) secretion (to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_un_c: -1.0
      - __Ecoli_panGEMs__fecrm_un_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMUtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXR2
    - name: Fe(III)hydroxamate reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_c: -2.0
      - __Ecoli_panGEMs__fe3hox_un_c: 2.0
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fe2_c: 2.0
      - fmnh2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXR2
      - sbo: SBO:0000176
  - !!omap
    - id: L_LACD2
    - name: L-Lactate dehydrogenase (ubiquinone)
    - metabolites: !!omap
      - lac__L_c: -1.0
      - pyr_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00325 and MNJNJBIH_00323 and MNJNJBIH_00324)
        or MNJNJBIH_04014
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: L_LACD2
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT9
    - name: acetyl-CoA C-acyltransferase (dodecanoyl-CoA) (r)
    - metabolites: !!omap
      - 3otdcoa_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - ddcacoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT9
      - rhea: RHEA:31091
      - sbo: SBO:0000176
  - !!omap
    - id: TRPtex
    - name: L-tryptophan transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - trp__L_e: -1.0
      - trp__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TRPtex
      - sbo: SBO:0000655
  - !!omap
    - id: PTRCt2pp
    - name: putrescine transport in via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ptrc_c: 1.0
      - ptrc_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00746 or MNJNJBIH_01453 or MNJNJBIH_05512
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PTRCt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GGGABAH
    - name: gamma-glutamyl-gamma-aminobutyric acid hydrolase
    - metabolites: !!omap
      - 4abut_c: 1.0
      - gg4abut_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01456
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GGGABAH
      - rhea: RHEA:19737
      - sbo: SBO:0000176
  - !!omap
    - id: PNTOtex
    - name: Pantothenate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - pnto__R_e: -1.0
      - pnto__R_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PNTOtex
      - sbo: SBO:0000655
  - !!omap
    - id: FRULYSK
    - name: Fructoselysine Kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - frulys_c: -1.0
      - frulysp_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03729
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FRULYSK
      - rhea: RHEA:28378
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__TSULtex
    - name: Thiosulfate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__tsul_e: -1.0
      - __Ecoli_panGEMs__tsul_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TSULtex
      - sbo: SBO:0000655
  - !!omap
    - id: TYRtex
    - name: L-tyrosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tyr__L_e: -1.0
      - tyr__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TYRtex
      - sbo: SBO:0000655
  - !!omap
    - id: URAtex
    - name: uracil transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ura_e: -1.0
      - ura_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: URAtex
      - sbo: SBO:0000655
  - !!omap
    - id: UREAtex
    - name: Urea transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - urea_e: -1.0
      - urea_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UREAtex
      - sbo: SBO:0000655
  - !!omap
    - id: URItex
    - name: uridine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - uri_e: -1.0
      - uri_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: URItex
      - sbo: SBO:0000655
  - !!omap
    - id: SULFACabcpp
    - name: sulfoacetate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - sulfac_c: 1.0
      - sulfac_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01043 and MNJNJBIH_01042 and MNJNJBIH_01047
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SULFACabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ETHSO3tex
    - name: ethanesulfonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - eths_e: -1.0
      - eths_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ETHSO3tex
      - sbo: SBO:0000655
  - !!omap
    - id: BUTSO3tex
    - name: butanesulfonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - butso3_e: -1.0
      - butso3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: BUTSO3tex
      - sbo: SBO:0000655
  - !!omap
    - id: LIPOtex
    - name: lipoate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - lipoate_e: -1.0
      - lipoate_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_01035 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LIPOtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CYANSTpp
    - name: Cyanide sulfurtransferase (periplasmic)
    - metabolites: !!omap
      - __Ecoli_panGEMs__tsul_p: -1.0
      - cyan_p: -1.0
      - h_p: 1.0
      - so3_p: 1.0
      - tcynt_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01468
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CYANSTpp
      - sbo: SBO:0000176
  - !!omap
    - id: VALtex
    - name: L-valine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - val__L_e: -1.0
      - val__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: VALtex
      - sbo: SBO:0000655
  - !!omap
    - id: XANtex
    - name: xanthine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - xan_e: -1.0
      - xan_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: XANtex
      - sbo: SBO:0000655
  - !!omap
    - id: MCPST
    - name: 3-mercaptopyruvate sulfurtransferase
    - metabolites: !!omap
      - cyan_c: -1.0
      - h_c: 1.0
      - mercppyr_c: -1.0
      - pyr_c: 1.0
      - tcynt_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02744
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: MCPST
      - sbo: SBO:0000176
  - !!omap
    - id: XYLtex
    - name: D-xylose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - xyl__D_e: -1.0
      - xyl__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: XYLtex
      - sbo: SBO:0000655
  - !!omap
    - id: PPPNtex
    - name: 3-phenylpropionate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - pppn_e: -1.0
      - pppn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PPPNtex
      - sbo: SBO:0000655
  - !!omap
    - id: ABUTtex
    - name: 4-aminobutyrate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 4abut_e: -1.0
      - 4abut_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ABUTtex
      - sbo: SBO:0000655
  - !!omap
    - id: FORtppi
    - name: formate transport via diffusion (cytoplasm to periplasm)
    - metabolites: !!omap
      - for_c: -1.0
      - for_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01008 or MNJNJBIH_02705
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FORtppi
      - sbo: SBO:0000655
  - !!omap
    - id: METSOX1abcpp
    - name: L-methionine S-oxide transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - metsox_S__L_c: 1.0
      - metsox_S__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: METSOX1abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PPTtex
    - name: Phosphonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ppt_e: -1.0
      - ppt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PPTtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: GALBDtex
    - name: beta D-galactose transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - gal_bD_e: -1.0
      - gal_bD_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALBDtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LIPAHT2ex
    - name: Core oligosaccharide lipid A:hexadecanoate transferase (n-C16:0) 
        (extracellular membrane)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_e: -1.0
      - __Ecoli_panGEMs__hacolipa_e: 1.0
      - h2o_e: 1.0
      - h_e: -1.0
      - hdca_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00674
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPAHT2ex
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLCTR1
    - name: Glucosyltransferase I (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__gicolipa_c: 1.0
      - __Ecoli_panGEMs__icolipa_c: -1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04040
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLCTR1
      - sbo: SBO:0000176
  - !!omap
    - id: LIPAabcpp
    - name: lipid A transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - lipa_c: -1.0
      - lipa_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: LIPAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LIPAHTex
    - name: Lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane)
    - metabolites: !!omap
      - __Ecoli_panGEMs__halipa_e: 1.0
      - h2o_e: 1.0
      - h_e: -1.0
      - hdca_e: -1.0
      - lipa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00674
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPAHTex
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LIPACabcpp
    - name: Lipid (cold) A transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__lipa_cold_c: -1.0
      - __Ecoli_panGEMs__lipa_cold_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPACabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ECAP1pp
    - name: Enterobacterial common antigen polymerase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__eca2und_p: 1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
      - unagamuf_p: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04214 and MNJNJBIH_04223
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ECAP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: PTRCtex
    - name: putrescine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ptrc_e: -1.0
      - ptrc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PTRCtex
      - sbo: SBO:0000655
  - !!omap
    - id: UDCPDPpp
    - name: undecaprenyl-diphosphatase (periplasm)
    - metabolites: !!omap
      - h2o_p: -1.0
      - h_p: 1.0
      - pi_p: 1.0
      - udcpdp_p: -1.0
      - udcpp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431 or MNJNJBIH_03374 or MNJNJBIH_00933
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UDCPDPpp
      - rhea: RHEA:28094
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mso3_e
    - name: Exchange of methanesulfonate.
    - metabolites: !!omap
      - mso3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mso3_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_23camp_e
    - name: Exchange of 2',3'-cyclic AMP(1-).
    - metabolites: !!omap
      - 23camp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_23camp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_23cgmp_e
    - name: Exchange of 2',3'-cyclic GMP(1-).
    - metabolites: !!omap
      - 23cgmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_23cgmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_23cump_e
    - name: Exchange of 2',3'-cyclic UMP(1-).
    - metabolites: !!omap
      - 23cump_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_23cump_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__ECAP2pp
    - name: Enterobacterial common antigen polymerase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__eca2und_p: -1.0
      - __Ecoli_panGEMs__eca3und_p: 1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
      - unagamuf_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04214 and MNJNJBIH_04223
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ECAP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3Ri
    - name: Fe(III) reduction
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - fe3_c: -2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04282
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3Ri
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXR3
    - name: Fe(III)hydroxamate reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_c: -2.0
      - __Ecoli_panGEMs__fe3hox_un_c: 2.0
      - fe2_c: 2.0
      - h_c: 2.0
      - rbflvrd_c: -1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXR3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERR1
    - name: Fe-enterobactin reduction (Fe(III)-unloading)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__feenter_c: -2.0
      - enter_c: 2.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERR1
      - sbo: SBO:0000176
  - !!omap
    - id: NODOy
    - name: nitric oxide dioxygenase
    - metabolites: !!omap
      - h_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - no3_c: 2.0
      - no_c: -2.0
      - o2_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02787
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: NODOy
      - rhea: RHEA:19465
      - sbo: SBO:0000176
  - !!omap
    - id: PYRtex
    - name: pyruvate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - pyr_e: -1.0
      - pyr_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PYRtex
      - sbo: SBO:0000655
  - !!omap
    - id: GALM2pp
    - name: aldose-1-epimerase
    - metabolites: !!omap
      - gal_bD_p: -1.0
      - gal_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00826
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GALM2pp
      - rhea: RHEA:28675
      - sbo: SBO:0000176
  - !!omap
    - id: CU1abcpp
    - name: Copper (Cu +1) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cu_c: -1.0
      - cu_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00535
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CU1abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERR3
    - name: Fe-enterobactin reduction (Fe(III)-unloading)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_c: -2.0
      - enter_c: 2.0
      - fe2_c: 2.0
      - h_c: 2.0
      - rbflvrd_c: -1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERR3
      - sbo: SBO:0000176
  - !!omap
    - id: SULFACtex
    - name: sulfoaceate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - sulfac_e: -1.0
      - sulfac_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SULFACtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_sulfac_e
    - name: Exchange of sulfonatoacetate.
    - metabolites: !!omap
      - sulfac_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sulfac_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_butso3_e
    - name: Exchange of butane-1-sulfonate.
    - metabolites: !!omap
      - butso3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_butso3_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__GLCTR3
    - name: Glucosyltransferase III (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ggagicolipa_c: -1.0
      - __Ecoli_panGEMs__gggagicolipa_c: 1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04035
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLCTR3
      - sbo: SBO:0000176
  - !!omap
    - id: EX_eths_e
    - name: Exchange of ethanesulfonate.
    - metabolites: !!omap
      - eths_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_eths_e
      - sbo: SBO:0000627
  - !!omap
    - id: DSERtex
    - name: D-serine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ser__D_e: -1.0
      - ser__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DSERtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LA4NTpp
    - name: 4-amino-4-deoxy-L-arabinotransferase (LPS lipid A modification, 
        periplasmic face of membrane))
    - metabolites: !!omap
      - __Ecoli_panGEMs__acolipa_p: 1.0
      - __Ecoli_panGEMs__colipa_p: -1.0
      - __Ecoli_panGEMs__uLa4n_p: -1.0
      - udcpp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02453
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LA4NTpp
      - sbo: SBO:0000176
  - !!omap
    - id: NODOx
    - name: nitric oxide dioxygenase
    - metabolites: !!omap
      - h_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - no3_c: 2.0
      - no_c: -2.0
      - o2_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02787
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: NODOx
      - rhea: RHEA:19469
      - sbo: SBO:0000176
  - !!omap
    - id: SERtex
    - name: L-serine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ser__L_e: -1.0
      - ser__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SERtex
      - sbo: SBO:0000655
  - !!omap
    - id: NOtex
    - name: nitric oxide transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - no_e: -1.0
      - no_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NOtex
      - sbo: SBO:0000655
  - !!omap
    - id: N2Otex
    - name: nitrious oxide transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - n2o_e: -1.0
      - n2o_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: N2Otex
      - sbo: SBO:0000655
  - !!omap
    - id: CRNt8pp
    - name: L-carnitine/D-carnitine antiporter (periplasm)
    - metabolites: !!omap
      - crn__D_c: -1.0
      - crn__D_p: 1.0
      - crn_c: 1.0
      - crn_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00063
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CRNt8pp
      - sbo: SBO:0000655
  - !!omap
    - id: CRNt2rpp
    - name: L-carnitine outward transport (H+ antiport)
    - metabolites: !!omap
      - crn_c: 1.0
      - crn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04594
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CRNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: CRNDt2rpp
    - name: D-carnitine outward transport (H+ antiport)
    - metabolites: !!omap
      - crn__D_c: 1.0
      - crn__D_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04594
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CRNDt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: CTBTt2rpp
    - name: cronobetaine outward transport (H+ antiport)
    - metabolites: !!omap
      - ctbt_c: 1.0
      - ctbt_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04594
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CTBTt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: 42A12BOOXpp
    - name: 4-(2-Aminoethyl)-1,2-benzenediol:oxygen 
        oxidoreductase(deaminating)(flavin-containing)
    - metabolites: !!omap
      - 34dhpac_p: 1.0
      - dopa_p: -1.0
      - h2o2_p: 1.0
      - h2o_p: -1.0
      - nh4_p: 1.0
      - o2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01527
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: 42A12BOOXpp
      - rhea: RHEA:27946
      - sbo: SBO:0000176
  - !!omap
    - id: TYROXDApp
    - name: Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) 
        (periplasm)
    - metabolites: !!omap
      - 4hoxpacd_p: 1.0
      - h2o2_p: 1.0
      - h2o_p: -1.0
      - nh4_p: 1.0
      - o2_p: -1.0
      - tym_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01527
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: TYROXDApp
      - rhea: RHEA:30591
      - sbo: SBO:0000176
  - !!omap
    - id: PACALDt2rpp
    - name: phenylacetaldehyde reversible transport via proton symport 
        (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - pacald_c: 1.0
      - pacald_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PACALDt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: PEAMNtex
    - name: phenethylamine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - peamn_e: -1.0
      - peamn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PEAMNtex
      - sbo: SBO:0000655
  - !!omap
    - id: PACALDtex
    - name: phenethylacetaldehyde transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - pacald_e: -1.0
      - pacald_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PACALDtex
      - sbo: SBO:0000655
  - !!omap
    - id: LIPOt2pp
    - name: Lipoate transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lipoate_c: 1.0
      - lipoate_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LIPOt2pp:2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AGM4PA
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide 
        amidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_c: 1.0
      - __Ecoli_panGEMs__anhgm4p_c: -1.0
      - __Ecoli_panGEMs__anhgm_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00141
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM4PA
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR3b
    - name: Ribonucleoside-diphosphate reductase (CDP) (glutaredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__grxox_c: 1.0
      - __Ecoli_panGEMs__grxrd_c: -1.0
      - cdp_c: -1.0
      - dcdp_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00941 and (MNJNJBIH_02911 and 
        MNJNJBIH_02912)) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_04020) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01197) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01788)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR3b
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR4b
    - name: Ribonucleoside-diphosphate reductase (UDP) (glutaredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__grxox_c: 1.0
      - __Ecoli_panGEMs__grxrd_c: -1.0
      - dudp_c: 1.0
      - h2o_c: 1.0
      - udp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00941 and (MNJNJBIH_02911 and 
        MNJNJBIH_02912)) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_04020) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01788) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01197)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR4b
      - sbo: SBO:0000176
  - !!omap
    - id: ACGAL1Ptex
    - name: N-acetyl-D-galactosamine 1-phosphate transport via diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - acgal1p_e: -1.0
      - acgal1p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACGAL1Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: ACGALtex
    - name: N-acetyl-D-galactosamine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - acgal_e: -1.0
      - acgal_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACGALtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLCUR1Ptex
    - name: D-glucuronate 1-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - glcur1p_e: -1.0
      - glcur1p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLCUR1Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: UDPGLCURtex
    - name: UDP-D-glucuronate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - udpglcur_e: -1.0
      - udpglcur_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UDPGLCURtex
      - sbo: SBO:0000655
  - !!omap
    - id: UDPGALPpp
    - name: UDPgalactose pyrophosphohydrolase
    - metabolites: !!omap
      - gal1p_p: 1.0
      - h2o_p: -1.0
      - h_p: 2.0
      - udpgal_p: -1.0
      - ump_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UDPGALPpp
      - sbo: SBO:0000176
  - !!omap
    - id: UACGAMPpp
    - name: UDP-N-acetyl-D-glucosamine pyrophosphohydrolase (periplasm)
    - metabolites: !!omap
      - acgam1p_p: 1.0
      - h2o_p: -1.0
      - h_p: 2.0
      - uacgam_p: -1.0
      - ump_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UACGAMPpp
      - rhea: RHEA:29547
      - sbo: SBO:0000176
  - !!omap
    - id: UACGALPpp
    - name: UDP-N-acetyl-D-galactosamine pyrophosphohydrolase (periplasm)
    - metabolites: !!omap
      - acgal1p_p: 1.0
      - h2o_p: -1.0
      - h_p: 2.0
      - udpacgal_p: -1.0
      - ump_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UACGALPpp
      - rhea: RHEA:29851
      - sbo: SBO:0000176
  - !!omap
    - id: UGLCURPpp
    - name: UDP-D-glucuronate pyrophosphohydrolase (periplasm)
    - metabolites: !!omap
      - glcur1p_p: 1.0
      - h2o_p: -1.0
      - h_p: 2.0
      - udpglcur_p: -1.0
      - ump_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UGLCURPpp
      - rhea: RHEA:29559
      - sbo: SBO:0000176
  - !!omap
    - id: FEROpp
    - name: ferroxidase
    - metabolites: !!omap
      - fe2_p: -4.0
      - fe3_p: 4.0
      - h2o_p: 2.0
      - h_p: -4.0
      - o2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00159 or MNJNJBIH_03683
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FEROpp
      - rhea: RHEA:11148
      - sbo: SBO:0000176
  - !!omap
    - id: ISETACabcpp
    - name: isethionate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - isetac_c: 1.0
      - isetac_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01042 and MNJNJBIH_01043 and MNJNJBIH_01047
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ISETACabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ISETACtex
    - name: isethionate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - isetac_e: -1.0
      - isetac_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ISETACtex
      - sbo: SBO:0000655
  - !!omap
    - id: GUR1PPpp
    - name: Glucuronate 1-phosphate phosphatase (periplasm)
    - metabolites: !!omap
      - glcur1p_p: -1.0
      - glcur_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GUR1PPpp
      - sbo: SBO:0000176
  - !!omap
    - id: UDPGtex
    - name: UDPglucose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - udpg_e: -1.0
      - udpg_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UDPGtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACGAL1PPpp
    - name: N-acetyl-D-galactosamine 1-phosphatase (periplasm)
    - metabolites: !!omap
      - acgal1p_p: -1.0
      - acgal_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ACGAL1PPpp
      - sbo: SBO:0000176
  - !!omap
    - id: UDPGALtex
    - name: UDPgalactose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - udpgal_e: -1.0
      - udpgal_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UDPGALtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACGAM1Ptex
    - name: N-acetyl-D-glucosamine 1-phosphate transport via diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - acgam1p_e: -1.0
      - acgam1p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACGAM1Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: UACGAMtex
    - name: UDP-N-acetyl-D-glucosamine transport via diffusion (extracellular to
        periplasm)
    - metabolites: !!omap
      - uacgam_e: -1.0
      - uacgam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UACGAMtex
      - sbo: SBO:0000655
  - !!omap
    - id: UDPACGALtex
    - name: UDP-N-acetyl-D-galactosamine transport via diffusion (extracellular 
        to periplasm)
    - metabolites: !!omap
      - udpacgal_e: -1.0
      - udpacgal_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UDPACGALtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AM4PCP
    - name: Anhydrous-N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhm3p_c: 1.0
      - __Ecoli_panGEMs__anhm4p_c: -1.0
      - ala__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01324
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AM4PCP
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AM3PA
    - name: Anhydrous-N-Acetylmuramyl-tripeptide amidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_c: 1.0
      - __Ecoli_panGEMs__anhm3p_c: -1.0
      - anhm_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00141
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AM3PA
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__UM4PCP
    - name: 
        UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine
        L,D-carboxypeptidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__um4p_c: -1.0
      - ala__D_c: 1.0
      - h2o_c: -1.0
      - ugmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01324
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__UM4PCP
      - sbo: SBO:0000176
  - !!omap
    - id: CBLAT
    - name: cob(I)alamin adenosyltransferase
    - metabolites: !!omap
      - adocbl_c: 1.0
      - atp_c: -1.0
      - cbl1_c: -1.0
      - h_c: -1.0
      - pppi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01419
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CBLAT:2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__NTRIR4pp
    - name: Nitrite Reductase (Menaquinole-8, periplasm)
    - metabolites: !!omap
      - h2o_p: 2.0
      - h_p: -2.0
      - mql8_c: -3.0
      - mqn8_c: 3.0
      - nh4_p: 1.0
      - no2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04568 and MNJNJBIH_04569 and MNJNJBIH_04570 
        and MNJNJBIH_04571
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__NTRIR4pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__NTRIR3pp
    - name: Nitrite Reductase (Ubiquinole-8, periplasm)
    - metabolites: !!omap
      - h2o_p: 2.0
      - h_p: -2.0
      - nh4_p: 1.0
      - no2_p: -1.0
      - q8_c: 3.0
      - q8h2_c: -3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04568 and MNJNJBIH_04569 and MNJNJBIH_04570 
        and MNJNJBIH_04571
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__NTRIR3pp
      - sbo: SBO:0000655
  - !!omap
    - id: INOSTt4pp
    - name: Na+/myo-inositol symporter (periplasm)
    - metabolites: !!omap
      - inost_c: 1.0
      - inost_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04107
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: INOSTt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: PHEMEtiex
    - name: protoheme transport irreversible out via diffusion (periplasm to 
        extracellular)
    - metabolites: !!omap
      - pheme_e: 1.0
      - pheme_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: PHEMEtiex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AGM3PA
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_c: 1.0
      - __Ecoli_panGEMs__anhgm3p_c: -1.0
      - __Ecoli_panGEMs__anhgm_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00141
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM3PA
      - sbo: SBO:0000176
  - !!omap
    - id: CYANtex
    - name: Cyanide transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cyan_e: -1.0
      - cyan_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CYANtex
      - sbo: SBO:0000655
  - !!omap
    - id: SO3tex
    - name: sulfite transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - so3_e: -1.0
      - so3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SO3tex:2
      - sbo: SBO:0000655
  - !!omap
    - id: TCYNTtex
    - name: Thiocyanate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tcynt_e: -1.0
      - tcynt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TCYNTtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACANTHAT
    - name: acetyl-CoA:anthranilate acetyltransferase
    - metabolites: !!omap
      - acanth_c: 1.0
      - accoa_c: -1.0
      - anth_c: -1.0
      - coa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01611
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: ACANTHAT
      - rhea: RHEA:28550
      - sbo: SBO:0000176
  - !!omap
    - id: METSOX2abcpp
    - name: L-methionine R-oxide transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - metsox_R__L_c: 1.0
      - metsox_R__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: METSOX2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: METSOX1tex
    - name: L-methionine S-oxide diffusion (extracellular)
    - metabolites: !!omap
      - metsox_S__L_e: -1.0
      - metsox_S__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: METSOX1tex
      - sbo: SBO:0000655
  - !!omap
    - id: METSOX2tex
    - name: L-methionine R-oxide diffusion (extracellular)
    - metabolites: !!omap
      - metsox_R__L_e: -1.0
      - metsox_R__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: METSOX2tex
      - sbo: SBO:0000655
  - !!omap
    - id: 3UMPtex
    - name: 3UMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 3ump_e: -1.0
      - 3ump_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 3UMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: MSO3abcpp
    - name: methanesulfonate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mso3_c: 1.0
      - mso3_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01042 and MNJNJBIH_01047 and MNJNJBIH_01043
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MSO3abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MSO3tex
    - name: methanesulfonate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - mso3_e: -1.0
      - mso3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MSO3tex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FECRMR1
    - name: Ferrichrome reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__fecrm_c: -2.0
      - __Ecoli_panGEMs__fecrm_un_c: 2.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMR1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FECRMR2
    - name: Ferrichrome reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_c: -2.0
      - __Ecoli_panGEMs__fecrm_un_c: 2.0
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fe2_c: 2.0
      - fmnh2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMR2
      - sbo: SBO:0000176
  - !!omap
    - id: TDP
    - name: thiamin pyrophosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - thmmp_c: 1.0
      - thmpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01275
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: TDP
      - rhea: RHEA:27998
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3PEPTabcpp
    - name: Tripeptide (LalaDgluMdap) transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_c: 1.0
      - __Ecoli_panGEMs__LalaDgluMdap_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01384 and MNJNJBIH_01386 and MNJNJBIH_01383 
        and MNJNJBIH_01497 and MNJNJBIH_01385) or (MNJNJBIH_02366 and 
        MNJNJBIH_02369 and MNJNJBIH_02367 and MNJNJBIH_02368) or (MNJNJBIH_01384
        and MNJNJBIH_01386 and MNJNJBIH_01385 and MNJNJBIH_01383 and 
        MNJNJBIH_01382)
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3PEPTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__4PEPTabcpp
    - name: Tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_c: 1.0
      - __Ecoli_panGEMs__LalaDgluMdapDala_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01382 and MNJNJBIH_01386 and MNJNJBIH_01383 
        and MNJNJBIH_01384 and MNJNJBIH_01385) or (MNJNJBIH_02366 and 
        MNJNJBIH_02369 and MNJNJBIH_02367 and MNJNJBIH_02368)
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__4PEPTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 3GMPtex
    - name: 3GMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - 3gmp_e: -1.0
      - 3gmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 3GMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_tym_e
    - name: Exchange of tyraminium.
    - metabolites: !!omap
      - tym_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tym_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__AGM3Pt2pp
    - name: GlcNAc-anhMurNAc tripeptide transport in via proton symport 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm3p_c: 1.0
      - __Ecoli_panGEMs__anhgm3p_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00475
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM3Pt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: SO4tex
    - name: sulfate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - so4_e: -1.0
      - so4_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SO4tex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AGM4Pt2pp
    - name: GlcNAc-anhMurNAc tetrapeptide transport in via proton symport 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm4p_c: 1.0
      - __Ecoli_panGEMs__anhgm4p_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00475
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM4Pt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AGMt2pp
    - name: GlcNAc-anhMurNAc transport in via proton symport (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm_c: 1.0
      - __Ecoli_panGEMs__anhgm_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00475
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGMt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ARBTNR1
    - name: Aerobactin reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_c: -2.0
      - __Ecoli_panGEMs__fad_c: 1.0
      - arbtn_c: 2.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ARBTNR1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ARBTNR2
    - name: Aerobactin reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_c: -2.0
      - __Ecoli_panGEMs__fmn_c: 1.0
      - arbtn_c: 2.0
      - fe2_c: 2.0
      - fmnh2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ARBTNR2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__METSOXR1
    - name: L-methionine-S-oxide reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - h2o_c: 1.0
      - met__L_c: 1.0
      - metsox_S__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02826 and MNJNJBIH_04731) or (MNJNJBIH_04210
        and MNJNJBIH_04731) or (MNJNJBIH_03949 and MNJNJBIH_02826) or 
        (MNJNJBIH_03949 and MNJNJBIH_04210)
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METSOXR1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__METSOXR2
    - name: L-methionine-R-sulfoxide reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - h2o_c: 1.0
      - met__L_c: 1.0
      - metsox_R__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02826 and MNJNJBIH_01922) or (MNJNJBIH_04210
        and MNJNJBIH_01922) or (MNJNJBIH_01981 and MNJNJBIH_04210) or 
        (MNJNJBIH_01981 and MNJNJBIH_02826)
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METSOXR2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DAPAL
    - name: 2,3-diaminopropionate amonnia lyase
    - metabolites: !!omap
      - __Ecoli_panGEMs__23dappa_c: -1.0
      - h2o_c: -1.0
      - nh4_c: 2.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03144
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAPAL
      - sbo: SBO:0000176
  - !!omap
    - id: AMPTASECG
    - name: alanyl aminopeptidase (cys-gly)
    - metabolites: !!omap
      - cgly_c: -1.0
      - cys__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01040 or MNJNJBIH_04773 or MNJNJBIH_00286
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: AMPTASECG
      - rhea: RHEA:28783
      - sbo: SBO:0000176
  - !!omap
    - id: EX_imp_e
    - name: Exchange of IMP(2-).
    - metabolites: !!omap
      - imp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_imp_e
      - sbo: SBO:0000627
  - !!omap
    - id: DOPAtex
    - name: dopamine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dopa_e: -1.0
      - dopa_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DOPAtex
      - sbo: SBO:0000655
  - !!omap
    - id: 4HOXPACDtex
    - name: 4-hydroxyphenylacetaldehyde transport via diffusion (extracellular 
        to periplasm)
    - metabolites: !!omap
      - 4hoxpacd_e: -1.0
      - 4hoxpacd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 4HOXPACDtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ARBTNR3
    - name: Aerobactin reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_c: -2.0
      - arbtn_c: 2.0
      - fe2_c: 2.0
      - h_c: 2.0
      - rbflvrd_c: -1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ARBTNR3
      - sbo: SBO:0000176
  - !!omap
    - id: LACZpp
    - name: b-galactosidase
    - metabolites: !!omap
      - gal_p: 1.0
      - glc__D_p: 1.0
      - h2o_p: -1.0
      - lcts_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02319
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LACZpp
      - sbo: SBO:0000176
  - !!omap
    - id: SPMDtex
    - name: spermidine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - spmd_e: -1.0
      - spmd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SPMDtex
      - sbo: SBO:0000655
  - !!omap
    - id: GPDDA1pp
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)
    - metabolites: !!omap
      - chol_p: 1.0
      - g3pc_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02433
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA1pp
      - rhea: RHEA:16061
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA5pp
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol)
    - metabolites: !!omap
      - g3pi_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - inost_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02433
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA5pp
      - rhea: RHEA:16501
      - sbo: SBO:0000176
  - !!omap
    - id: ETHAtex
    - name: ethanolamine transport via diffusion (extracellular)
    - metabolites: !!omap
      - etha_e: -1.0
      - etha_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ETHAtex
      - sbo: SBO:0000655
  - !!omap
    - id: G3PStex
    - name: glycerophosphserine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - g3ps_e: -1.0
      - g3ps_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G3PStex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMR1
    - name: Ferroxamine reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__feoxam_c: -2.0
      - __Ecoli_panGEMs__feoxam_un_c: 2.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04831
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMR1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMR2
    - name: Ferroxamine reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_c: -2.0
      - __Ecoli_panGEMs__feoxam_un_c: 2.0
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fe2_c: 2.0
      - fmnh2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04831
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMR2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMR3
    - name: Ferroxamine reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_c: -2.0
      - __Ecoli_panGEMs__feoxam_un_c: 2.0
      - fe2_c: 2.0
      - h_c: 2.0
      - rbflvrd_c: -1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04831
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMR3
      - sbo: SBO:0000176
  - !!omap
    - id: PTHRpp
    - name: phospho-L-threonine phosphatase (periplasmic)
    - metabolites: !!omap
      - h2o_p: -1.0
      - pi_p: 1.0
      - thr__L_p: 1.0
      - thrp_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: PTHRpp
      - rhea: RHEA:30579
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERR2
    - name: Fe-enterobactin reduction (Fe(III)-unloading)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_c: -2.0
      - __Ecoli_panGEMs__fmn_c: 1.0
      - enter_c: 2.0
      - fe2_c: 2.0
      - fmnh2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERR2
      - sbo: SBO:0000176
  - !!omap
    - id: FLVR
    - name: flavin reductase
    - metabolites: !!omap
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - rbflvrd_c: 1.0
      - ribflv_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04282
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: FLVR:2
      - rhea: RHEA:19377
      - sbo: SBO:0000176
  - !!omap
    - id: SUCCtex
    - name: succinate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - succ_e: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SUCCtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXR1
    - name: Fe(III)hydroxamate reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__fe3hox_c: -2.0
      - __Ecoli_panGEMs__fe3hox_un_c: 2.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXR1
      - sbo: SBO:0000176
  - !!omap
    - id: SUCRtex
    - name: sucrose transport transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - sucr_e: -1.0
      - sucr_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SUCRtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FECRMR3
    - name: Ferrichrome reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_c: -2.0
      - __Ecoli_panGEMs__fecrm_un_c: 2.0
      - fe2_c: 2.0
      - h_c: 2.0
      - rbflvrd_c: -1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMR3
      - sbo: SBO:0000176
  - !!omap
    - id: LALGP
    - name: L-alanyl-gamma-L-glutamate peptidase
    - metabolites: !!omap
      - LalaLglu_c: -1.0
      - ala__L_c: 1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00286
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: LALGP
      - rhea: RHEA:29335
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGM4PApp
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide 
        amidase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_p: 1.0
      - __Ecoli_panGEMs__anhgm4p_p: -1.0
      - __Ecoli_panGEMs__anhgm_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03071 or MNJNJBIH_04667 or MNJNJBIH_02639
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM4PApp
      - sbo: SBO:0000176
  - !!omap
    - id: ARABDI
    - name: L-fucose isomerase
    - metabolites: !!omap
      - arab__D_c: -1.0
      - rbl__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03057
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ARABDI
      - rhea: RHEA:13849
      - sbo: SBO:0000176
  - !!omap
    - id: AGt3
    - name: silver transport out via proton antiport
    - metabolites: !!omap
      - ag_c: -1.0
      - ag_e: 1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00606 and MNJNJBIH_00608 and MNJNJBIH_00607 
        and MNJNJBIH_00609
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: AGt3
      - sbo: SBO:0000655
  - !!omap
    - id: CD2t3pp
    - name: cadmium (Cd+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - cd2_c: -1.0
      - cd2_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04366 or MNJNJBIH_00821
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CD2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: ZNabcpp
    - name: zinc (Zn+2) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - zn2_c: 1.0
      - zn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02011 and MNJNJBIH_02010 and MNJNJBIH_02009
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ZNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: SKMt2pp
    - name: shikimate transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - skm_c: 1.0
      - skm_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02162
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SKMt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FE2t2pp
    - name: iron (II) transport in via proton symport (periplasm)
    - metabolites: !!omap
      - fe2_c: 1.0
      - fe2_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02589
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FE2t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYC2Ptex
    - name: Glycerol-2-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - glyc2p_e: -1.0
      - glyc2p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYC2Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: PSERtex
    - name: phospho-L-serine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - pser_e: -1.0
      - pser_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PSERtex
      - sbo: SBO:0000655
  - !!omap
    - id: TARTRtex
    - name: Tartrate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tartr__L_e: -1.0
      - tartr__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TARTRtex
      - sbo: SBO:0000655
  - !!omap
    - id: R5Ptex
    - name: Ribose 5-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - r5p_e: -1.0
      - r5p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: R5Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: THRPtex
    - name: phospho-L-threonine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - thrp_e: -1.0
      - thrp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: THRPtex
      - sbo: SBO:0000655
  - !!omap
    - id: TYRPtex
    - name: phopho-L-tyrosine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - tyrp_e: -1.0
      - tyrp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TYRPtex
      - sbo: SBO:0000655
  - !!omap
    - id: R5PPpp
    - name: ribose 5-phosphate phosphatase
    - metabolites: !!omap
      - h2o_p: -1.0
      - pi_p: 1.0
      - r5p_p: -1.0
      - rib__D_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: R5PPpp
      - rhea: RHEA:29471
      - sbo: SBO:0000176
  - !!omap
    - id: PSP_Lpp
    - name: phospho-L-serine phosphatase (periplasmic)
    - metabolites: !!omap
      - h2o_p: -1.0
      - pi_p: 1.0
      - pser_p: -1.0
      - ser__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: PSP_Lpp
      - rhea: RHEA:21208
      - sbo: SBO:0000176
  - !!omap
    - id: TYRPpp
    - name: phospho-L-tyrosine phosphatase (periplasmic)
    - metabolites: !!omap
      - h2o_p: -1.0
      - pi_p: 1.0
      - tyr__L_p: 1.0
      - tyrp_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: TYRPpp
      - sbo: SBO:0000176
  - !!omap
    - id: R1PK
    - name: ribose 1-phosphokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - r15bp_c: 1.0
      - r1p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: R1PK
      - rhea: RHEA:29775
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PAPSR2
    - name: Phosphoadenylyl-sulfate reductase (glutaredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__grxox_c: 1.0
      - __Ecoli_panGEMs__grxrd_c: -1.0
      - h_c: 2.0
      - pap_c: 1.0
      - paps_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04020 and MNJNJBIH_03014) or (MNJNJBIH_00941
        and MNJNJBIH_03014) or (MNJNJBIH_01197 and MNJNJBIH_03014) or 
        (MNJNJBIH_01788 and MNJNJBIH_03014)
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPSR2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GRXR
    - name: Glutaredoxin reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__grxox_c: -1.0
      - __Ecoli_panGEMs__grxrd_c: 1.0
      - gthox_c: 1.0
      - gthrd_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01197 or MNJNJBIH_04020 or MNJNJBIH_01788 or 
        MNJNJBIH_00941
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GRXR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR1b
    - name: Ribonucleoside-diphosphate reductase (ADP) (glutaredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__grxox_c: 1.0
      - __Ecoli_panGEMs__grxrd_c: -1.0
      - adp_c: -1.0
      - dadp_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01197) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_04020) or (MNJNJBIH_00941 and (MNJNJBIH_02911 and 
        MNJNJBIH_02912)) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01788)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR1b
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNDR2b
    - name: Ribonucleoside-diphosphate reductase (GDP) (glutaredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__grxox_c: 1.0
      - __Ecoli_panGEMs__grxrd_c: -1.0
      - dgdp_c: 1.0
      - gdp_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00941 and (MNJNJBIH_02911 and 
        MNJNJBIH_02912)) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01197) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_01788) or ((MNJNJBIH_02911 and MNJNJBIH_02912) and 
        MNJNJBIH_04020)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR2b
      - sbo: SBO:0000176
  - !!omap
    - id: TAURtex
    - name: taurine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - taur_e: -1.0
      - taur_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TAURtex
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAE181
    - name: fatty-acid-CoA thioesterase (octadecenoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ocdcea_c: 1.0
      - octdececoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE181
      - rhea: RHEA:40139
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE160
    - name: fatty-acid-CoA thioesterase (hexadecanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdca_c: 1.0
      - pmtcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE160
      - rhea: RHEA:16645
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE140
    - name: fatty-acid-CoA thioesterase (tetradecanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - tdcoa_c: -1.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE140
      - rhea: RHEA:40119
      - sbo: SBO:0000176
  - !!omap
    - id: LEUabcpp
    - name: L-leucine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - leu__L_c: 1.0
      - leu__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_03825 and MNJNJBIH_03830 and MNJNJBIH_03827 
        and MNJNJBIH_03824 and MNJNJBIH_03826) or (MNJNJBIH_03828 and 
        MNJNJBIH_03826 and MNJNJBIH_03825 and MNJNJBIH_03827 and MNJNJBIH_03824)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LEUabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: L_LACt2rpp
    - name: L-lactate reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lac__L_c: 1.0
      - lac__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04011
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: L_LACt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: MALt2_2pp
    - name: Malate transport via proton symport (2 H) (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - mal__L_c: 1.0
      - mal__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03918
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MALt2_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CPGNR1
    - name: Coprogen(Fe(III)) reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_c: -2.0
      - __Ecoli_panGEMs__cpgn_un_c: 2.0
      - __Ecoli_panGEMs__fad_c: 1.0
      - fadh2_c: -1.0
      - fe2_c: 2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNR1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CPGNR2
    - name: Coprogen(Fe(III)) reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_c: -2.0
      - __Ecoli_panGEMs__cpgn_un_c: 2.0
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fe2_c: 2.0
      - fmnh2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNR2
      - sbo: SBO:0000176
  - !!omap
    - id: THRtex
    - name: L-threonine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - thr__L_e: -1.0
      - thr__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: THRtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CPGNR3
    - name: Coprogen(Fe(III)) reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_c: -2.0
      - __Ecoli_panGEMs__cpgn_un_c: 2.0
      - fe2_c: 2.0
      - h_c: 2.0
      - rbflvrd_c: -1.0
      - ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNR3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CPGNUtpp
    - name: Coprogen unloaded secretion
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_un_c: -1.0
      - __Ecoli_panGEMs__cpgn_un_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNUtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CPGNUtex
    - name: Coprogen unloaded secretion (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_un_e: 1.0
      - __Ecoli_panGEMs__cpgn_un_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNUtex
      - sbo: SBO:0000655
  - !!omap
    - id: MALt2_3pp
    - name: Malate transport via proton symport (3 H) (periplasm)
    - metabolites: !!omap
      - h_c: 3.0
      - h_p: -3.0
      - mal__L_c: 1.0
      - mal__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04609 or MNJNJBIH_04628
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MALt2_3pp
      - sbo: SBO:0000655
  - !!omap
    - id: MALTabcpp
    - name: maltose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - malt_c: 1.0
      - malt_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04516 and MNJNJBIH_04519 and MNJNJBIH_04515 
        and MNJNJBIH_04517
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MALTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MALTHXabcpp
    - name: Maltohexaose transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthx_c: 1.0
      - __Ecoli_panGEMs__malthx_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04517 and MNJNJBIH_04515 and MNJNJBIH_04516 
        and MNJNJBIH_04519
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTHXabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MALTPTabcpp
    - name: Maltopentaose transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltpt_c: 1.0
      - __Ecoli_panGEMs__maltpt_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04519 and MNJNJBIH_04515 and MNJNJBIH_04516 
        and MNJNJBIH_04517
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTPTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AAMYL
    - name: Alpha-amylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__14glucan_c: -1.0
      - __Ecoli_panGEMs__malthx_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05354
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AAMYL
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AAMYLpp
    - name: Alpha-amylase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__14glucan_p: -1.0
      - __Ecoli_panGEMs__malthx_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03973
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AAMYLpp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MALTTRabcpp
    - name: Maltotriose transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malttr_c: 1.0
      - __Ecoli_panGEMs__malttr_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04517 and MNJNJBIH_04519 and MNJNJBIH_04516 
        and MNJNJBIH_04515
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTTRabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: THMDtex
    - name: thymidine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - thymd_e: -1.0
      - thymd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: THMDtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MALTTTRabcpp
    - name: Maltotetraose transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltttr_c: 1.0
      - __Ecoli_panGEMs__maltttr_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04516 and MNJNJBIH_04515 and MNJNJBIH_04517 
        and MNJNJBIH_04519
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTTTRabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MAN6Pt6_2pp
    - name: Mannose-6-phosphate transport via phosphate antiport (periplasm)
    - metabolites: !!omap
      - man6p_c: 1.0
      - man6p_p: -1.0
      - pi_c: -2.0
      - pi_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04089
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MAN6Pt6_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAL80t2pp
    - name: fatty-acid-CoA ligase (octanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - octa_p: -1.0
      - octcoa_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01952 or MNJNJBIH_01841
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL80t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: PPGPPDP
    - name: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
    - metabolites: !!omap
      - gdp_c: 1.0
      - h2o_c: -1.0
      - ppgpp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04061
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PPGPPDP:2
      - rhea: RHEA:14253
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CPGNabcpp
    - name: Coprogen transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_c: 1.0
      - __Ecoli_panGEMs__cpgn_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00189 and MNJNJBIH_00191 and MNJNJBIH_00190
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MANGLYCptspp
    - name: 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - man6pglyc_c: 1.0
      - manglyc_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02617 and MNJNJBIH_00796 and MNJNJBIH_02618
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MANGLYCptspp
      - sbo: SBO:0000655
  - !!omap
    - id: MELIBt2pp
    - name: melibiose transport in via symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - melib_c: 1.0
      - melib_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04606 or MNJNJBIH_00378
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MELIBt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: METabcpp
    - name: L-methionine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - met__L_c: 1.0
      - met__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00241 and MNJNJBIH_00240 and MNJNJBIH_00242
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: METabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CITtex
    - name: citrate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cit_e: -1.0
      - cit_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CITtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACGAtex
    - name: N-Acetyl-D-glucosamine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - acgam_e: -1.0
      - acgam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACGAtex
      - sbo: SBO:0000655
  - !!omap
    - id: DDCAtexi
    - name: Fatty acid (dodecanoate) transport via facilitated irreversible 
        diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ddca_e: -1.0
      - ddca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: DDCAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: TTDCAtexi
    - name: Tetradecanoate transport via facilitated irreversible diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - ttdca_e: -1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: TTDCAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: HDCAtexi
    - name: Hexadecanoate transport via facilitated irreversible diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - hdca_e: -1.0
      - hdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: HDCAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: GUAC
    - name: guanylate cyclase
    - metabolites: !!omap
      - 35cgmp_c: 1.0
      - gtp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GUAC
      - rhea: RHEA:13665
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__fe3hox_un_e
    - name: Fe(III)hydoxamate, unloaded exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_un_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fe3hox_un_e
      - sbo: SBO:0000627
  - !!omap
    - id: GGPTRCS
    - name: gamma glutamyl putrescine synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ggptrc_c: 1.0
      - glu__L_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ptrc_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01455
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GGPTRCS
      - rhea: RHEA:13633
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__23dappa_e
    - name: 2,3-diaminopropionate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__23dappa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__23dappa_e
      - sbo: SBO:0000627
  - !!omap
    - id: RMNtpp
    - name: L-rhamnose transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - rmn_c: 1.0
      - rmn_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04359
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: RMNtpp
      - sbo: SBO:0000655
  - !!omap
    - id: 23PDE2pp
    - name: 2',3'-cyclic-nucleotide phosphodiesterase (UMP) (periplasm)
    - metabolites: !!omap
      - 23cump_p: -1.0
      - 3ump_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 23PDE2pp
      - rhea: RHEA:27878
      - sbo: SBO:0000176
  - !!omap
    - id: 23PDE4pp
    - name: 2',3'-cyclic-nucleotide phosphodiesterase (CMP) (periplasm)
    - metabolites: !!omap
      - 23ccmp_p: -1.0
      - 3cmp_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 23PDE4pp
      - rhea: RHEA:27882
      - sbo: SBO:0000176
  - !!omap
    - id: 23PDE9pp
    - name: 2',3'-cyclic-nucleotide phosphodiesterase (GMP) (periplasm)
    - metabolites: !!omap
      - 23cgmp_p: -1.0
      - 3gmp_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 23PDE9pp
      - rhea: RHEA:27858
      - sbo: SBO:0000176
  - !!omap
    - id: SERt4pp
    - name: L-serine via sodium symport (periplasm)
    - metabolites: !!omap
      - na1_c: 1.0
      - na1_p: -1.0
      - ser__L_c: 1.0
      - ser__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03417
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SERt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__METDtex
    - name: D-methionine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__met__D_e: -1.0
      - __Ecoli_panGEMs__met__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METDtex
      - sbo: SBO:0000655
  - !!omap
    - id: SUCCt2_3pp
    - name: Succintate transport via proton symport (3 H) (periplasm)
    - metabolites: !!omap
      - h_c: 3.0
      - h_p: -3.0
      - succ_c: 1.0
      - succ_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04609 or MNJNJBIH_04628
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCCt2_3pp
      - sbo: SBO:0000655
  - !!omap
    - id: MNLptspp
    - name: mannitol transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - mnl1p_c: 1.0
      - mnl_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02617 and MNJNJBIH_04006 and MNJNJBIH_02618)
        or (MNJNJBIH_02617 and MNJNJBIH_03211 and MNJNJBIH_03210 and 
        MNJNJBIH_02618)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MNLptspp
      - sbo: SBO:0000655
  - !!omap
    - id: NAt3_1p5pp
    - name: sodium proton antiporter (H:NA is 1.5) (periplasm)
    - metabolites: !!omap
      - h_c: 3.0
      - h_p: -3.0
      - na1_c: -2.0
      - na1_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01315
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NAt3_1p5pp
      - sbo: SBO:0000655
  - !!omap
    - id: SARCOX
    - name: sarcosine oxidase
    - metabolites: !!omap
      - fald_c: 1.0
      - gly_c: 1.0
      - h2o2_c: 1.0
      - h2o_c: -1.0
      - o2_c: -1.0
      - sarcs_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01192
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: SARCOX
      - rhea: RHEA:13313
      - sbo: SBO:0000176
  - !!omap
    - id: MN6PP
    - name: mannose 6-phosphate phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - man6p_c: -1.0
      - man_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00909 or MNJNJBIH_01868 or MNJNJBIH_04126 or 
        MNJNJBIH_04264
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MN6PP
      - sbo: SBO:0000176
  - !!omap
    - id: NAt3_2pp
    - name: sodium proton antiporter (H:NA is 2) (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - na1_c: -1.0
      - na1_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00033
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NAt3_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: 3KGK
    - name: 3-keto-L-gulonate kinase
    - metabolites: !!omap
      - 3dhguln_c: -1.0
      - 3dhgulnp_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03982
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 3KGK
      - rhea: RHEA:28222
      - sbo: SBO:0000176
  - !!omap
    - id: METtex
    - name: L-methionine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - met__L_e: -1.0
      - met__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: METtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cd2_e
    - name: Exchange of cadmium(2+).
    - metabolites: !!omap
      - cd2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cd2_e
      - sbo: SBO:0000627
  - !!omap
    - id: F6PP
    - name: D-fructose 6-phosphate phosphatase
    - metabolites: !!omap
      - f6p_c: -1.0
      - fru_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00909 or MNJNJBIH_04126 or MNJNJBIH_02927 or 
        MNJNJBIH_04264
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: F6PP
      - sbo: SBO:0000176
  - !!omap
    - id: NMNPtpp
    - name: NMN permease (periplasm)
    - metabolites: !!omap
      - nmn_c: 1.0
      - nmn_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00820
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: NMNPtpp
      - sbo: SBO:0000655
  - !!omap
    - id: NO2t2rpp
    - name: nitrite transport in via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - no2_c: 1.0
      - no2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01360 or MNJNJBIH_03722
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NO2t2rpp:2
      - sbo: SBO:0000655
  - !!omap
    - id: NO3t7pp
    - name: nitrate transport in via nitrite antiport (periplasm)
    - metabolites: !!omap
      - no2_c: -1.0
      - no2_p: 1.0
      - no3_c: 1.0
      - no3_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01360 or MNJNJBIH_01617
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NO3t7pp:2
      - sbo: SBO:0000655
  - !!omap
    - id: ORNabcpp
    - name: ornithine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - orn__L_c: 1.0
      - orn__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02509 and MNJNJBIH_02510 and MNJNJBIH_02508 
        and MNJNJBIH_02512
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ORNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PIuabcpp
    - name: phosphate transport via ABC system (uptake, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 2.0
      - pi_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04155 and MNJNJBIH_04157 and MNJNJBIH_04158 
        and MNJNJBIH_04156
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: PIuabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PNTOt4pp
    - name: Pantothenate sodium symporter (periplasm)
    - metabolites: !!omap
      - na1_c: 1.0
      - na1_p: -1.0
      - pnto__R_c: 1.0
      - pnto__R_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03602
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PNTOt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: FRULYSDG
    - name: Fructoselysine phosphate deglycase
    - metabolites: !!omap
      - frulysp_c: -1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
      - lys__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03727
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FRULYSDG
      - rhea: RHEA:28382
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__METDabcpp
    - name: D-methionine transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__met__D_c: 1.0
      - __Ecoli_panGEMs__met__D_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00241 and MNJNJBIH_00242 and MNJNJBIH_00240
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GDPMNH
    - name: GDP-mannose mannosyl hydrolase
    - metabolites: !!omap
      - gdp_c: 1.0
      - gdpmann_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - man_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02238
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: GDPMNH
      - rhea: RHEA:28102
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAL60t2pp
    - name: fatty-acid-CoA ligase (hexanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - hxa_p: -1.0
      - hxcoa_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01952 or MNJNJBIH_01841
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL60t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ILEabcpp
    - name: L-isoleucine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ile__L_c: 1.0
      - ile__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03826 and MNJNJBIH_03825 and MNJNJBIH_03830 
        and MNJNJBIH_03827 and MNJNJBIH_03824
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ILEabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: INDOLEt2pp
    - name: Indole transport via proton symport, irreversible (periplasm)
    - metabolites: !!omap
      - h_c: -1.0
      - h_p: 1.0
      - indole_c: -1.0
      - indole_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_03610 and MNJNJBIH_03609) and MNJNJBIH_03348
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: INDOLEt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: INSt2pp
    - name: inosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ins_c: 1.0
      - ins_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03243 or MNJNJBIH_02606 or MNJNJBIH_02590
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: INSt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: PROabcpp
    - name: L-proline transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - pro__L_c: 1.0
      - pro__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02913 and MNJNJBIH_02914 and MNJNJBIH_02915
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PROabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PROt2rpp
    - name: L-proline reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - pro__L_c: 1.0
      - pro__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04594 or MNJNJBIH_00444
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PROt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: MNLtex
    - name: mannitol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - mnl_e: -1.0
      - mnl_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MNLtex
      - sbo: SBO:0000655
  - !!omap
    - id: PTRCabcpp
    - name: putrescine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ptrc_c: 1.0
      - ptrc_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00948 and MNJNJBIH_00949 and MNJNJBIH_00951 
        and MNJNJBIH_00950) or (MNJNJBIH_01587 and MNJNJBIH_01589 and 
        MNJNJBIH_01588 and MNJNJBIH_01590) or (MNJNJBIH_01267 and MNJNJBIH_01268
        and MNJNJBIH_01266 and MNJNJBIH_01265)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PTRCabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: LYXt2pp
    - name: L-Lyxose transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lyx__L_c: 1.0
      - lyx__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04359
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LYXt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GDPDPK
    - name: GDP diphosphokinase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - gdp_c: -1.0
      - h_c: 1.0
      - ppgpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03039 or MNJNJBIH_04061
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GDPDPK:2
      - rhea: RHEA:28098
      - sbo: SBO:0000176
  - !!omap
    - id: OCDCAtexi
    - name: Octadecanoate transport via facilitated irreversible diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - ocdca_e: -1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: OCDCAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: OCDCEAtexi
    - name: Octadecenoate (n-C18:1) transport via facilitated irreversible 
        diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ocdcea_e: -1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: OCDCEAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: ASNNpp
    - name: L-asparaginase
    - metabolites: !!omap
      - asn__L_p: -1.0
      - asp__L_p: 1.0
      - h2o_p: -1.0
      - nh4_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03235
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ASNNpp
      - rhea: RHEA:21016
      - sbo: SBO:0000176
  - !!omap
    - id: GLUNpp
    - name: glutaminase
    - metabolites: !!omap
      - gln__L_p: -1.0
      - glu__L_p: 1.0
      - h2o_p: -1.0
      - nh4_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03235
    - subsystem: Glutamate Metabolism
    - annotation: !!omap
      - biggr: GLUNpp
      - rhea: RHEA:15889
      - sbo: SBO:0000176
  - !!omap
    - id: G6Ptex
    - name: glucose 6-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - g6p_e: -1.0
      - g6p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G6Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: NTD12
    - name: 5'-nucleotidase (dIMP)
    - metabolites: !!omap
      - dimp_c: -1.0
      - din_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_02493 or MNJNJBIH_03760
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD12
      - rhea: RHEA:29383
      - sbo: SBO:0000176
  - !!omap
    - id: TUNGSabcpp
    - name: tungstate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - tungs_c: 1.0
      - tungs_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05038 and MNJNJBIH_05039 and MNJNJBIH_00834
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: TUNGSabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: NAtex
    - name: sodium transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - na1_e: -1.0
      - na1_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NAtex
      - sbo: SBO:0000655
  - !!omap
    - id: MOBDabcpp
    - name: molybdate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mobd_c: 1.0
      - mobd_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05038 and MNJNJBIH_05039 and MNJNJBIH_00834
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: MOBDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MOBDtex
    - name: molybdate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - mobd_e: -1.0
      - mobd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MOBDtex
      - sbo: SBO:0000655
  - !!omap
    - id: NI2uabcpp
    - name: nickel transport via ABC system (uptake, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ni2_c: 1.0
      - ni2_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04752
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NI2uabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FECRMtonex
    - name: Ferrichrome transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_e: -1.0
      - __Ecoli_panGEMs__fecrm_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01392 and MNJNJBIH_03319 and MNJNJBIH_03320)
        and MNJNJBIH_00188
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMtonex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ARBTNtonex
    - name: Aerobactin transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_e: -1.0
      - __Ecoli_panGEMs__arbtn_fe3_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ARBTNtonex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_enter_e
    - name: Enterochelin exchange
    - metabolites: !!omap
      - enter_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_enter_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__fecrm_un_e
    - name: Ferrichrome minus Fe(III) exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_un_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fecrm_un_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cgly_e
    - name: Exchange of L-cysteinylglycine zwitterion.
    - metabolites: !!omap
      - cgly_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cgly_e
      - sbo: SBO:0000627
  - !!omap
    - id: NI2tex
    - name: nickel transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ni2_e: -1.0
      - ni2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NI2tex
      - sbo: SBO:0000655
  - !!omap
    - id: NTD10pp
    - name: 5'-nucleotidase (XMP)
    - metabolites: !!omap
      - h2o_p: -1.0
      - pi_p: 1.0
      - xmp_p: -1.0
      - xtsn_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00531
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD10pp
      - rhea: RHEA:28530
      - sbo: SBO:0000176
  - !!omap
    - id: NTD1pp
    - name: 5'-nucleotidase (dUMP)
    - metabolites: !!omap
      - dump_p: -1.0
      - duri_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD1pp
      - rhea: RHEA:29355
      - sbo: SBO:0000176
  - !!omap
    - id: EX_chtbs_e
    - name: Exchange of N,N'-diacetylchitobiose.
    - metabolites: !!omap
      - chtbs_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_chtbs_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gmp_e
    - name: Exchange of guanosine 5'-monophosphate(2-).
    - metabolites: !!omap
      - gmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTD2pp
    - name: 5'-nucleotidase (UMP)
    - metabolites: !!omap
      - h2o_p: -1.0
      - pi_p: 1.0
      - ump_p: -1.0
      - uri_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00531 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD2pp
      - rhea: RHEA:29359
      - sbo: SBO:0000176
  - !!omap
    - id: NACtex
    - name: Nicotinic acid transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - nac_e: -1.0
      - nac_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NACtex
      - sbo: SBO:0000655
  - !!omap
    - id: NTD3pp
    - name: 5'-nucleotidase (dCMP)
    - metabolites: !!omap
      - dcmp_p: -1.0
      - dcyt_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD3pp
      - rhea: RHEA:29363
      - sbo: SBO:0000176
  - !!omap
    - id: NTD4pp
    - name: 5'-nucleotidase (CMP)
    - metabolites: !!omap
      - cmp_p: -1.0
      - cytd_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD4pp
      - rhea: RHEA:29367
      - sbo: SBO:0000176
  - !!omap
    - id: NTD5pp
    - name: 5'-nucleotidase (dTMP)
    - metabolites: !!omap
      - dtmp_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
      - thymd_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00531
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD5pp
      - rhea: RHEA:11080
      - sbo: SBO:0000176
  - !!omap
    - id: EX_h2o2_e
    - name: Exchange of hydrogen peroxide.
    - metabolites: !!omap
      - h2o2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2o2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ump_e
    - name: Exchange of uridine 5'-monophosphate(2-).
    - metabolites: !!omap
      - ump_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ump_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pydam_e
    - name: Exchange of pyridoxaminium(1+).
    - metabolites: !!omap
      - pydam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pydam_e
      - sbo: SBO:0000627
  - !!omap
    - id: CRNabcpp
    - name: L-carnitine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - crn_c: 1.0
      - crn_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02915 and MNJNJBIH_02913 and MNJNJBIH_02914
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CRNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CRNDabcpp
    - name: D-carnitine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - crn__D_c: 1.0
      - crn__D_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02915 and MNJNJBIH_02913 and MNJNJBIH_02914
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CRNDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: DNTPPA
    - name: Dihydroneopterin triphosphate pyrophosphatase
    - metabolites: !!omap
      - ahdt_c: -1.0
      - dhpmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02017 or MNJNJBIH_00132
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DNTPPA
      - rhea: RHEA:25302
      - sbo: SBO:0000176
  - !!omap
    - id: NTD6pp
    - name: 5'-nucleotidase (dAMP)
    - metabolites: !!omap
      - dad_2_p: 1.0
      - damp_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD6pp
      - rhea: RHEA:29371
      - sbo: SBO:0000176
  - !!omap
    - id: NTD7pp
    - name: 5'-nucleotidase (AMP)
    - metabolites: !!omap
      - adn_p: 1.0
      - amp_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD7pp
      - rhea: RHEA:29375
      - sbo: SBO:0000176
  - !!omap
    - id: CTBTabcpp
    - name: crotonobetaine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ctbt_c: 1.0
      - ctbt_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02914 and MNJNJBIH_02913 and MNJNJBIH_02915
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CTBTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: NTD9pp
    - name: 5'-nucleotidase (GMP)
    - metabolites: !!omap
      - gmp_p: -1.0
      - gsn_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD9pp
      - rhea: RHEA:27714
      - sbo: SBO:0000176
  - !!omap
    - id: NH4tex
    - name: ammonia transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - nh4_e: -1.0
      - nh4_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NH4tex
      - sbo: SBO:0000655
  - !!omap
    - id: PEAMNOpp
    - name: Phenethylamine oxidase
    - metabolites: !!omap
      - h2o2_p: 1.0
      - h2o_p: -1.0
      - nh4_p: 1.0
      - o2_p: -1.0
      - pacald_p: 1.0
      - peamn_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01527
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: PEAMNOpp
      - rhea: RHEA:25265
      - sbo: SBO:0000176
  - !!omap
    - id: GAL1PPpp
    - name: D-galactose 1-phosphatase
    - metabolites: !!omap
      - gal1p_p: -1.0
      - gal_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01124
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GAL1PPpp
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP9_1
    - name: Nucleoside triphosphate pyrophosphorylase (itp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - imp_c: 1.0
      - itp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03232
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP9_1
      - rhea: RHEA:29399
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP10
    - name: Nucleoside triphosphate pyrophosphorylase (ditp)
    - metabolites: !!omap
      - dimp_c: 1.0
      - ditp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03232
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP10
      - rhea: RHEA:28342
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP11_1
    - name: Nucleoside triphosphate pyrophosphorylase (xtp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - xmp_c: 1.0
      - xtp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03232
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP11_1
      - rhea: RHEA:28610
      - sbo: SBO:0000176
  - !!omap
    - id: H2O2tex
    - name: hydrogen peroxide transport via diffusion (external)
    - metabolites: !!omap
      - h2o2_e: -1.0
      - h2o2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: H2O2tex
      - sbo: SBO:0000655
  - !!omap
    - id: ARGDCpp
    - name: arginine decarboxylase
    - metabolites: !!omap
      - agm_p: 1.0
      - arg__L_p: -1.0
      - co2_p: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03216
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ARGDCpp
      - rhea: RHEA:17641
      - sbo: SBO:0000176
  - !!omap
    - id: URIH
    - name: Uridine hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - rib__D_c: 1.0
      - ura_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02351 or MNJNJBIH_00704 or MNJNJBIH_00047
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: URIH
      - rhea: RHEA:15577
      - sbo: SBO:0000176
  - !!omap
    - id: ADEtex
    - name: adenine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ade_e: -1.0
      - ade_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ADEtex
      - sbo: SBO:0000655
  - !!omap
    - id: ADNtex
    - name: adenosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - adn_e: -1.0
      - adn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: ADNtex
      - sbo: SBO:0000655
  - !!omap
    - id: NADPHQR2
    - name: NADPH Quinone Reductase (Ubiquinone-8)
    - metabolites: !!omap
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03341
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADPHQR2
      - rhea: RHEA:29111
      - sbo: SBO:0000176
  - !!omap
    - id: NADPHQR3
    - name: NADPH Quinone Reductase (Menaquinone-8)
    - metabolites: !!omap
      - h_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03341
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADPHQR3
      - rhea: RHEA:29115
      - sbo: SBO:0000176
  - !!omap
    - id: NADPHQR4
    - name: NADPH Quinone Reductase (2-Demethylmenaquinone-8)
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - 2dmmql8_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03341
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADPHQR4
      - rhea: RHEA:30511
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLBRAN2
    - name: 1,4-alpha-glucan branching enzyme (glycogen -> bglycogen)
    - metabolites: !!omap
      - __Ecoli_panGEMs__bglycogen_c: 1.0
      - __Ecoli_panGEMs__glycogen_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03801
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLBRAN2
      - sbo: SBO:0000176
  - !!omap
    - id: ASR
    - name: arsenate reductase
    - metabolites: !!omap
      - arsna_c: -1.0
      - aso3_c: 1.0
      - gthox_c: 1.0
      - gthrd_c: -2.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02708
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ASR:2
      - sbo: SBO:0000176
  - !!omap
    - id: ASO3tex
    - name: arsenite transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - aso3_e: -1.0
      - aso3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ASO3tex:2
      - sbo: SBO:0000655
  - !!omap
    - id: AGMtex
    - name: agmatine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - agm_e: -1.0
      - agm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: AGMtex
      - sbo: SBO:0000655
  - !!omap
    - id: ALAtex
    - name: L-alanine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ala__L_e: -1.0
      - ala__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ALAtex
      - sbo: SBO:0000655
  - !!omap
    - id: BALAtex
    - name: beta-alanine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ala_B_e: -1.0
      - ala_B_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: BALAtex
      - sbo: SBO:0000655
  - !!omap
    - id: DALAtex
    - name: D-Alanine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ala__D_e: -1.0
      - ala__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DALAtex
      - sbo: SBO:0000655
  - !!omap
    - id: MANGLYCtex
    - name: 2-O-alpha-mannosyl-D-glycerate transport via diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - manglyc_e: -1.0
      - manglyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MANGLYCtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_frulys_e
    - name: Exchange of fructosyllysine(1+).
    - metabolites: !!omap
      - frulys_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_frulys_e
      - sbo: SBO:0000627
  - !!omap
    - id: AMPtex
    - name: AMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - amp_e: -1.0
      - amp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: AMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: XTSNH
    - name: Xanthosine hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - rib__D_c: 1.0
      - xan_c: 1.0
      - xtsn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00047
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: XTSNH
      - sbo: SBO:0000176
  - !!omap
    - id: FRUURt2rpp
    - name: D-fructuronate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - fruur_c: 1.0
      - fruur_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04783
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FRUURt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: FRUURtex
    - name: D-fructuronate transport via diffusion (extracellular)
    - metabolites: !!omap
      - fruur_e: -1.0
      - fruur_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FRUURtex
      - sbo: SBO:0000655
  - !!omap
    - id: ARBtex
    - name: L-arabinose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - arab__L_e: -1.0
      - arab__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ARBtex
      - sbo: SBO:0000655
  - !!omap
    - id: ARGtex
    - name: L-arginine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - arg__L_e: -1.0
      - arg__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ARGtex
      - sbo: SBO:0000655
  - !!omap
    - id: INSH
    - name: Inosine hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - hxan_c: 1.0
      - ins_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00047
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: INSH
      - rhea: RHEA:16657
      - sbo: SBO:0000176
  - !!omap
    - id: ASCBtex
    - name: L-ascorbate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ascb__L_e: -1.0
      - ascb__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ASCBtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAL100t2pp
    - name: fatty-acid-CoA ligase (decanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - dca_p: -1.0
      - dcacoa_c: 1.0
      - h_c: 1.0
      - h_p: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01952 or MNJNJBIH_01841
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL100t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: RIBabcpp
    - name: D-ribose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - rib__D_c: 1.0
      - rib__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04740 and MNJNJBIH_04738 and MNJNJBIH_04739 
        and MNJNJBIH_04741) or (MNJNJBIH_04180 and MNJNJBIH_04181 and 
        MNJNJBIH_04179 and MNJNJBIH_04178)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: RIBabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ECAtpp
    - name: enterobacterial common antigen transferase (flippase, cytoplasm to 
        periplasm)
    - metabolites: !!omap
      - unagamuf_c: -1.0
      - unagamuf_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04221
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: ECAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__O16GLCT2
    - name: Glucosyltransferase II (LPS O16 antigen biosynthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__gfgaragund_c: -1.0
      - __Ecoli_panGEMs__o16aund_c: 1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16GLCT2
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA3pp
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
    - metabolites: !!omap
      - g3ps_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ser__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02433
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA3pp
      - rhea: RHEA:29875
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA4pp
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)
    - metabolites: !!omap
      - g3pg_p: -1.0
      - glyc3p_p: 1.0
      - glyc_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02433
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA4pp
      - rhea: RHEA:29907
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA2pp
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
    - metabolites: !!omap
      - etha_p: 1.0
      - g3pe_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02433
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA2pp
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAL120t2pp
    - name: fatty-acid-CoA ligase (dodecanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - ddca_p: -1.0
      - ddcacoa_c: 1.0
      - h_c: 1.0
      - h_p: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01841 or MNJNJBIH_01952
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL120t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCAt2rpp
    - name: D-glycerate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - glyc__R_c: 1.0
      - glyc__R_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03455 or MNJNJBIH_03044
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYCAt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCAtex
    - name: D-glycerate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glyc__R_e: -1.0
      - glyc__R_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLYCAtex
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAL140t2pp
    - name: fatty-acid-CoA ligase (tetradecanoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - ppi_c: 1.0
      - tdcoa_c: 1.0
      - ttdca_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01841 or MNJNJBIH_01952
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL140t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__enlipa_e
    - name: Phosphoethanolamine KDO(2)-lipid (A) exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__enlipa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__enlipa_e
      - sbo: SBO:0000627
  - !!omap
    - id: BUTtex
    - name: Butyrate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - but_e: -1.0
      - but_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: BUTtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__hacolipa_e
    - name: Hepta-acylated core oligosaccharide lipid A (E. coli) exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__hacolipa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__hacolipa_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__AGM4PCP
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide 
        L,D-carboxypeptidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm3p_c: 1.0
      - __Ecoli_panGEMs__anhgm4p_c: -1.0
      - ala__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01324
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM4PCP
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__4PCP
    - name: Tetrapeptide L,D-carboxypeptidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_c: -1.0
      - __Ecoli_panGEMs__LalaDgluMdap_c: 1.0
      - ala__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01324
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__4PCP
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXtonex
    - name: Fe(III)hydroxamine transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_e: -1.0
      - __Ecoli_panGEMs__fe3hox_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01392 and MNJNJBIH_03319 and MNJNJBIH_03320)
        and MNJNJBIH_00188
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXtonex
      - sbo: SBO:0000655
  - !!omap
    - id: MG2uabcpp
    - name: Magnesium (Mg+2) ABC transporter (ubtake, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mg2_c: 1.0
      - mg2_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04752
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: MG2uabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__4PCPpp
    - name: Tetrapeptide L,D-carboxypeptidase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_p: -1.0
      - __Ecoli_panGEMs__LalaDgluMdap_p: 1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02364
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__4PCPpp
      - sbo: SBO:0000176
  - !!omap
    - id: CHLtex
    - name: choline transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - chol_e: -1.0
      - chol_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CHLtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYBabcpp
    - name: Glycine betaine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyb_c: 1.0
      - glyb_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02913 and MNJNJBIH_02915 and MNJNJBIH_02914
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYBabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYC3Pt6pp
    - name: 'Glycerol-3-phosphate : phosphate antiporter (periplasm)'
    - metabolites: !!omap
      - glyc3p_c: 1.0
      - glyc3p_p: -1.0
      - pi_c: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02434
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYC3Pt6pp
      - sbo: SBO:0000655
  - !!omap
    - id: MMETtex
    - name: S-methyl-L-methionine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - mmet_e: -1.0
      - mmet_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MMETtex
      - sbo: SBO:0000655
  - !!omap
    - id: FE3tex
    - name: iron (III) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fe3_e: -1.0
      - fe3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FE3tex
      - sbo: SBO:0000655
  - !!omap
    - id: MG2tex
    - name: magnesium (Mg+2) transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - mg2_e: -1.0
      - mg2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MG2tex
      - sbo: SBO:0000655
  - !!omap
    - id: Zn2tex
    - name: zinc (Zn+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - zn2_e: -1.0
      - zn2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: Zn2tex
      - sbo: SBO:0000655
  - !!omap
    - id: CD2tex
    - name: cadmium (Cd+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cd2_e: -1.0
      - cd2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CD2tex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCLTt4pp
    - name: glycolate transport via sodium symport (periplasm)
    - metabolites: !!omap
      - glyclt_c: 1.0
      - glyclt_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04563
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYCLTt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCtpp
    - name: glycerol transport via channel (periplasm)
    - metabolites: !!omap
      - glyc_c: -1.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04382
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYCtpp
      - sbo: SBO:0000655
  - !!omap
    - id: H2Otpp
    - name: H2O transport via diffusion (periplasm)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h2o_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00973
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: H2Otpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLNabcpp
    - name: L-glutamine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: 1.0
      - gln__L_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00894 and MNJNJBIH_00892 and MNJNJBIH_00893
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CO2tex
    - name: CO2 transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - co2_e: -1.0
      - co2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CO2tex
      - sbo: SBO:0000655
  - !!omap
    - id: GLUabcpp
    - name: L-glutamate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glu__L_c: 1.0
      - glu__L_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00706 and MNJNJBIH_00708 and MNJNJBIH_00707 
        and MNJNJBIH_00705
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLUabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLUABUTt7pp
    - name: 4-aminobutyrate/glutamate antiport (periplasm)
    - metabolites: !!omap
      - 4abut_c: -1.0
      - 4abut_p: 1.0
      - glu__L_c: 1.0
      - glu__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01640
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLUABUTt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLUt2rpp
    - name: L-glutamate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - glu__L_c: 1.0
      - glu__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04576
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLUt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: HCINNMt2rpp
    - name: 3-hydroxycinnamic acid transport via proton symport, reversible 
        (periplasm)
    - metabolites: !!omap
      - 3hcinnm_c: 1.0
      - 3hcinnm_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00395
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HCINNMt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: HISabcpp
    - name: L-histidine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - his__L_c: 1.0
      - his__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02509 and MNJNJBIH_02508 and MNJNJBIH_02510 
        and MNJNJBIH_02511
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HISabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: HISt2rpp
    - name: L-histidine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - his__L_c: 1.0
      - his__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00143
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HISt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: CBIAT
    - name: Cobinamide adenyltransferase
    - metabolites: !!omap
      - adocbi_c: 1.0
      - atp_c: -1.0
      - cbi_c: -1.0
      - h_c: -1.0
      - pppi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01419
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CBIAT:2
      - sbo: SBO:0000176
  - !!omap
    - id: GLUt4pp
    - name: Na+/glutamate symport (periplasm)
    - metabolites: !!omap
      - glu__L_c: 1.0
      - glu__L_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04066
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLUt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYALDtpp
    - name: Glyceraldehyde facilitated diffusion (periplasm)
    - metabolites: !!omap
      - glyald_c: 1.0
      - glyald_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04382
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYALDtpp
      - sbo: SBO:0000655
  - !!omap
    - id: CRNtex
    - name: L-carnitine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - crn_e: -1.0
      - crn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CRNtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_etha_e
    - name: Exchange of ethanolaminium(1+).
    - metabolites: !!omap
      - etha_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_etha_e
      - sbo: SBO:0000627
  - !!omap
    - id: LYSabcpp
    - name: L-lysine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - lys__L_c: 1.0
      - lys__L_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02510 and MNJNJBIH_02508 and MNJNJBIH_02512 
        and MNJNJBIH_02509
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LYSabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: COBALT2tex
    - name: cobalt (Co+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cobalt2_e: -1.0
      - cobalt2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: COBALT2tex
      - sbo: SBO:0000655
  - !!omap
    - id: LCTSt3ipp
    - name: Lactose transport via proton aniport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lcts_c: -1.0
      - lcts_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01682 or MNJNJBIH_02358 or MNJNJBIH_00100
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LCTSt3ipp
      - sbo: SBO:0000655
  - !!omap
    - id: PPK2
    - name: polyphosphate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ppi_c: -1.0
      - pppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02714
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: PPK2:2
      - rhea: RHEA:29423
      - sbo: SBO:0000176
  - !!omap
    - id: ARBt3ipp
    - name: L-arabinose transport via proton antiport (periplasm)
    - metabolites: !!omap
      - arab__L_c: -1.0
      - arab__L_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01682
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARBt3ipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__14GLUCANabcpp
    - name: 1,4-alpha-D-glucan transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__14glucan_c: 1.0
      - __Ecoli_panGEMs__14glucan_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04515 and MNJNJBIH_04517 and MNJNJBIH_04519 
        and MNJNJBIH_04516
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__14GLUCANabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__14GLUCANtexi
    - name: 1,4-alpha-D-glucan transport via diffusion (extracellular to 
        periplasm) irreversible
    - metabolites: !!omap
      - __Ecoli_panGEMs__14glucan_e: -1.0
      - __Ecoli_panGEMs__14glucan_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__14GLUCANtexi
      - sbo: SBO:0000655
  - !!omap
    - id: DINStex
    - name: deoxyinosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - din_e: -1.0
      - din_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DINStex
      - sbo: SBO:0000655
  - !!omap
    - id: DHPTPE
    - name: dihydroneopterin triphosphate 2'-epimerase
    - metabolites: !!omap
      - ahdt_c: -1.0
      - dhmptp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02505
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHPTPE
      - rhea: RHEA:28346
      - sbo: SBO:0000176
  - !!omap
    - id: PPDOy
    - name: Propane-1,2-diol:NADP+ 1-oxidoreductase
    - metabolites: !!omap
      - 12ppd__R_c: 1.0
      - h_c: -1.0
      - lald__D_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00355
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PPDOy
      - sbo: SBO:0000176
  - !!omap
    - id: NTD12pp
    - name: 5'-nucleotidase (dIMP) (periplasm)
    - metabolites: !!omap
      - dimp_p: -1.0
      - din_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD12pp
      - rhea: RHEA:29383
      - sbo: SBO:0000176
  - !!omap
    - id: PPA2
    - name: inorganic triphosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ppi_c: 1.0
      - pppi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02715 or MNJNJBIH_03002 or MNJNJBIH_03368
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: PPA2:2
      - rhea: RHEA:14157
      - sbo: SBO:0000176
  - !!omap
    - id: DIMPtex
    - name: dIMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dimp_e: -1.0
      - dimp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DIMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_hdca_e
    - name: Exchange of hexadecanoate.
    - metabolites: !!omap
      - hdca_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hdca_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glcr_e
    - name: Exchange of D-glucarate(2-).
    - metabolites: !!omap
      - glcr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glcr_e
      - sbo: SBO:0000627
  - !!omap
    - id: GNKr
    - name: gluconokinase
    - metabolites: !!omap
      - 6pgc_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - glcn_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03805
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GNKr
      - rhea: RHEA:19433
      - sbo: SBO:0000176
  - !!omap
    - id: HMBS
    - name: hydroxymethylbilane synthase
    - metabolites: !!omap
      - h2o_c: -1.0
      - hmbil_c: 1.0
      - nh4_c: 4.0
      - ppbng_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04236
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: HMBS
      - rhea: RHEA:13185
      - sbo: SBO:0000176
  - !!omap
    - id: 3NTD7pp
    - name: 3'-nucleotidase (AMP) (periplasm)
    - metabolites: !!omap
      - 3amp_p: -1.0
      - adn_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 3NTD7pp
      - rhea: RHEA:27898
      - sbo: SBO:0000176
  - !!omap
    - id: DMStex
    - name: Dimethyl sulfide transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - dms_e: -1.0
      - dms_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DMStex
      - sbo: SBO:0000655
  - !!omap
    - id: 3NTD4pp
    - name: 3'-nucleotidase (CMP) (periplasm)
    - metabolites: !!omap
      - 3cmp_p: -1.0
      - cytd_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722 or MNJNJBIH_00423 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 3NTD4pp
      - rhea: RHEA:27894
      - sbo: SBO:0000176
  - !!omap
    - id: 3NTD2pp
    - name: 3'-nucleotidase (UMP) (periplasm)
    - metabolites: !!omap
      - 3ump_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
      - uri_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 3NTD2pp
      - rhea: RHEA:27890
      - sbo: SBO:0000176
  - !!omap
    - id: 3NTD9pp
    - name: 3'-nucleotidase (GMP) (periplasm)
    - metabolites: !!omap
      - 3gmp_p: -1.0
      - gsn_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722 or MNJNJBIH_00423
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 3NTD9pp
      - rhea: RHEA:27862
      - sbo: SBO:0000176
  - !!omap
    - id: RMK
    - name: rhamnulokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - rml1p_c: 1.0
      - rml_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04355
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RMK
      - rhea: RHEA:20117
      - sbo: SBO:0000176
  - !!omap
    - id: HYPOE
    - name: hypothetical enyme
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - pyam5p_c: -1.0
      - pydam_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: HYPOE
      - rhea: RHEA:25135
      - sbo: SBO:0000176
  - !!omap
    - id: MEPCT
    - name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
    - metabolites: !!omap
      - 2me4p_c: -1.0
      - 4c2me_c: 1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03005
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: MEPCT
      - rhea: RHEA:13429
      - sbo: SBO:0000176
  - !!omap
    - id: GLUDy_1
    - name: glutamate dehydrogenase (NADP)
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - nh4_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01905
    - subsystem: Glutamate Metabolism
    - annotation: !!omap
      - biggr: GLUDy_1
      - rhea: RHEA:11612
      - sbo: SBO:0000176
  - !!omap
    - id: 23PDE7pp
    - name: 2',3'-cyclic-nucleotide phosphodiesterase (AMP) (periplasm)
    - metabolites: !!omap
      - 23camp_p: -1.0
      - 3amp_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04722
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 23PDE7pp
      - rhea: RHEA:27886
      - sbo: SBO:0000176
  - !!omap
    - id: GALURt2rpp
    - name: D-galacturonate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - galur_c: 1.0
      - galur_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03423
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALURt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: CSNtex
    - name: cytosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - csn_e: -1.0
      - csn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CSNtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCLTDy
    - name: Glycolate dehydrogenase (NADP)
    - metabolites: !!omap
      - glx_c: -1.0
      - glyclt_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01164 or MNJNJBIH_03952
    - subsystem: Glyoxylate Metabolism
    - annotation: !!omap
      - biggr: GLYCLTDy
      - rhea: RHEA:10992
      - sbo: SBO:0000176
  - !!omap
    - id: LYSDC
    - name: lysine decarboxylase
    - metabolites: !!omap
      - 15dap_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
      - lys__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00227 or MNJNJBIH_04620
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: LYSDC
      - rhea: RHEA:22352
      - sbo: SBO:0000176
  - !!omap
    - id: GLCNt2rpp
    - name: D-gluconate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - glcn_c: 1.0
      - glcn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04783 or MNJNJBIH_03804 or MNJNJBIH_03777
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLCNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLCptspp
    - name: D-glucose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - g6p_c: 1.0
      - glc__D_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01747 and MNJNJBIH_02617 and MNJNJBIH_02619 
        and MNJNJBIH_02618) or (MNJNJBIH_01238 and MNJNJBIH_02618 and 
        MNJNJBIH_02617 and MNJNJBIH_02619) or (MNJNJBIH_01967 and MNJNJBIH_02617
        and MNJNJBIH_01966 and MNJNJBIH_01965 and MNJNJBIH_02618)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLCptspp
      - sbo: SBO:0000655
  - !!omap
    - id: GLCRt2rpp
    - name: D-glucarate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - glcr_c: 1.0
      - glcr_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03455 or MNJNJBIH_03044
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLCRt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLCt2pp
    - name: D-glucose transport in via proton symport (periplasm)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - glc__D_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03220
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLCt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: UREAtpp
    - name: Urea transport via facilitate diffusion (periplasm)
    - metabolites: !!omap
      - urea_c: 1.0
      - urea_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04382
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: UREAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: XANt2pp
    - name: xanthine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - xan_c: 1.0
      - xan_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03155 or MNJNJBIH_04067 or MNJNJBIH_03160
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: XANt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYC3Pabcpp
    - name: sn-Glycerol 3-phosphate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc3p_c: 1.0
      - glyc3p_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03822 and MNJNJBIH_03821 and MNJNJBIH_03823 
        and MNJNJBIH_03820
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYC3Pabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PPPNt2rpp
    - name: 3-phenylpropionate transport via proton symport, reversible 
        (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - pppn_c: 1.0
      - pppn_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02763
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PPPNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: PTRCORNt7pp
    - name: putrescine/ornithine antiporter (periplasm)
    - metabolites: !!omap
      - orn__L_c: -1.0
      - orn__L_p: 1.0
      - ptrc_c: 1.0
      - ptrc_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00746
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PTRCORNt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLCURt2rpp
    - name: D-glucuronate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - glcur_c: 1.0
      - glcur_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04361 or MNJNJBIH_03423
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLCURt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_h2o_e
    - name: Exchange of water.
    - metabolites: !!omap
      - h2o_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2o_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ala__D_e
    - name: Exchange of D-alanine zwitterion.
    - metabolites: !!omap
      - ala__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ala__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: SPMDabcpp
    - name: spermidine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - spmd_c: 1.0
      - spmd_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01265 and MNJNJBIH_01267 and MNJNJBIH_01266 
        and MNJNJBIH_01268) or (MNJNJBIH_01590 and MNJNJBIH_01589 and 
        MNJNJBIH_01588 and MNJNJBIH_01587)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SPMDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYNTtex
    - name: Cyanate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cynt_e: -1.0
      - cynt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CYNTtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: HG2tex
    - name: mercury (Hg+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - hg2_e: -1.0
      - hg2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HG2tex
      - sbo: SBO:0000655
  - !!omap
    - id: NTPP5
    - name: Nucleoside triphosphate pyrophosphorylase (datp)
    - metabolites: !!omap
      - damp_c: 1.0
      - datp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02017 or MNJNJBIH_03036
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTPP5
      - rhea: RHEA:28334
      - sbo: SBO:0000176
  - !!omap
    - id: THDPS
    - name: tetrahydrodipicolinate succinylase
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - sl2a6o_c: 1.0
      - succoa_c: -1.0
      - thdp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00206
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: THDPS
      - rhea: RHEA:17325
      - sbo: SBO:0000176
  - !!omap
    - id: ACONMT
    - name: Trans-aconitate methyltransferase
    - metabolites: !!omap
      - acon_T_c: -1.0
      - aconm_c: 1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01671
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: ACONMT
      - sbo: SBO:0000176
  - !!omap
    - id: XTSNtex
    - name: xanthosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - xtsn_e: -1.0
      - xtsn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: XTSNtex
      - sbo: SBO:0000655
  - !!omap
    - id: ATPM
    - name: ATP maintenance requirement
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 6.86
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Biomass and maintenance functions
    - annotation: !!omap
      - biggr: ATPM
      - rhea: RHEA:13065
      - sbo: SBO:0000176
  - !!omap
    - id: CYStex
    - name: L-cysteine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cys__L_e: -1.0
      - cys__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CYStex
      - sbo: SBO:0000655
  - !!omap
    - id: NADPPPS
    - name: NADP phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nad_c: 1.0
      - nadp_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NADPPPS
      - rhea: RHEA:28050
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mnl_e
    - name: Exchange of D-mannitol.
    - metabolites: !!omap
      - mnl_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mnl_e
      - sbo: SBO:0000627
  - !!omap
    - id: THRD_L
    - name: L-threonine deaminase
    - metabolites: !!omap
      - 2obut_c: 1.0
      - nh4_c: 1.0
      - thr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04200 or MNJNJBIH_03447
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: THRD_L
      - rhea: RHEA:22108
      - sbo: SBO:0000176
  - !!omap
    - id: EX_malt_e
    - name: Exchange of maltose.
    - metabolites: !!omap
      - malt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_malt_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTD3
    - name: 5'-nucleotidase (dCMP)
    - metabolites: !!omap
      - dcmp_c: -1.0
      - dcyt_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_02493
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD3
      - rhea: RHEA:29363
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDtex
    - name: cytidine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cytd_e: -1.0
      - cytd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CYTDtex
      - sbo: SBO:0000655
  - !!omap
    - id: GLYOX
    - name: hydroxyacylglutathione hydrolase
    - metabolites: !!omap
      - gthrd_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - lac__D_c: 1.0
      - lgt__S_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00250
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: GLYOX
      - rhea: RHEA:25245
      - sbo: SBO:0000176
  - !!omap
    - id: DADNtex
    - name: deoxyadenosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dad_2_e: -1.0
      - dad_2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: DADNtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__4PEPTtex
    - name: LalaDgluMdapDala (pentapeptide) transport via diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_e: -1.0
      - __Ecoli_panGEMs__LalaDgluMdapDala_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__4PEPTtex
      - sbo: SBO:0000655
  - !!omap
    - id: NAMNPP
    - name: nicotinic acid mononucleotide pyrophosphorylase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - nac_c: -1.0
      - nicrnt_c: 1.0
      - pi_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01039
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NAMNPP
      - rhea: RHEA:36163
      - sbo: SBO:0000176
  - !!omap
    - id: EX_pnto__R_e
    - name: Exchange of (R)-pantothenate.
    - metabolites: !!omap
      - pnto__R_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pnto__R_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__SELNPS
    - name: Selenophosphate synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__selnp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - seln_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01908
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__SELNPS
      - sbo: SBO:0000176
  - !!omap
    - id: DHAtex
    - name: Dihydroxyacetone transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - dha_e: -1.0
      - dha_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DHAtex
      - sbo: SBO:0000655
  - !!omap
    - id: ETOHtex
    - name: ethanol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - etoh_e: -1.0
      - etoh_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ETOHtex
      - sbo: SBO:0000655
  - !!omap
    - id: MTRPOX
    - name: N-methyltryptophan oxidase
    - metabolites: !!omap
      - Nmtrp_c: -1.0
      - fald_c: 1.0
      - h2o2_c: 1.0
      - h2o_c: -1.0
      - o2_c: -1.0
      - trp__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01192
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: MTRPOX
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGM4PCPpp
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide 
        L,D-carboxypeptidase (periplasmic)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm3p_p: 1.0
      - __Ecoli_panGEMs__anhgm4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02364
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM4PCPpp
      - sbo: SBO:0000176
  - !!omap
    - id: GDTP
    - name: guanosine-5'-triphosphate,3'-diphosphate diphosphatase
    - metabolites: !!omap
      - gdptp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ppgpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04207
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GDTP:2
      - rhea: RHEA:13073
      - sbo: SBO:0000176
  - !!omap
    - id: CRNCAR
    - name: carnitine-CoA racemase
    - metabolites: !!omap
      - crnDcoa_c: 1.0
      - crncoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00059
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CRNCAR
      - rhea: RHEA:30539
      - sbo: SBO:0000176
  - !!omap
    - id: GALabcpp
    - name: D-galactose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gal_c: 1.0
      - gal_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02336 and MNJNJBIH_02337 and MNJNJBIH_02338)
        or (MNJNJBIH_04738 and MNJNJBIH_04740 and MNJNJBIH_04739 and 
        MNJNJBIH_04741)
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCLTt2rpp
    - name: glycolate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - glyclt_c: 1.0
      - glyclt_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04011
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYCLTt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: GUAt2pp
    - name: guanine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - gua_c: 1.0
      - gua_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04067
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GUAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: HPPPNt2rpp
    - name: 3-(3-hydroxyphenyl)propionate transport via proton symport, 
        reversible (periplasm)
    - metabolites: !!omap
      - 3hpppn_c: 1.0
      - 3hpppn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00395
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HPPPNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__RNDR2
    - name: Ribonucleoside-diphosphate reductase (GDP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - dgdp_c: 1.0
      - gdp_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04210 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429)) or (MNJNJBIH_02826 and (MNJNJBIH_02428 and 
        MNJNJBIH_02429))
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNDR2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_asn__L_e
    - name: Exchange of L-asparagine zwitterion.
    - metabolites: !!omap
      - asn__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_asn__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: ANHMK
    - name: 1,6-anhydrous-N-Acetylmuramate kinase
    - metabolites: !!omap
      - acmum6p_c: 1.0
      - adp_c: 1.0
      - anhm_c: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01771
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: ANHMK
      - sbo: SBO:0000176
  - !!omap
    - id: DCAtex
    - name: Decanoate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dca_e: -1.0
      - dca_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DCAtex
      - sbo: SBO:0000655
  - !!omap
    - id: DHFR
    - name: dihydrofolate reductase
    - metabolites: !!omap
      - dhf_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - thf_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01731 or MNJNJBIH_00073
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHFR
      - rhea: RHEA:15009
      - sbo: SBO:0000176
  - !!omap
    - id: EX_cit_e
    - name: Exchange of citrate(3-).
    - metabolites: !!omap
      - cit_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cit_e
      - sbo: SBO:0000627
  - !!omap
    - id: PRAIi
    - name: phosphoribosylanthranilate isomerase (irreversible)
    - metabolites: !!omap
      - 2cpr5p_c: 1.0
      - pran_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01408
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: PRAIi
      - rhea: RHEA:21540
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mal__L_e
    - name: Exchange of (S)-malate(2-).
    - metabolites: !!omap
      - mal__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mal__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: NMNN
    - name: NMN nucleosidase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ncam_c: 1.0
      - nmn_c: -1.0
      - r5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NMNN
      - rhea: RHEA:23140
      - sbo: SBO:0000176
  - !!omap
    - id: XAND
    - name: xanthine dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - urate_c: 1.0
      - xan_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03139 and MNJNJBIH_03140 and MNJNJBIH_03141
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: XAND
      - sbo: SBO:0000176
  - !!omap
    - id: EX_no2_e
    - name: Nitrite exchange
    - metabolites: !!omap
      - no2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_no2_e
      - sbo: SBO:0000627
  - !!omap
    - id: HACD3
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)
    - metabolites: !!omap
      - 3hocoa_c: 1.0
      - 3oocoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD3
      - rhea: RHEA:31195
      - sbo: SBO:0000176
  - !!omap
    - id: TYRTA
    - name: tyrosine transaminase
    - metabolites: !!omap
      - 34hpp_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - tyr__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04544 or MNJNJBIH_01034 or MNJNJBIH_04197
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: TYRTA
      - rhea: RHEA:15093
      - sbo: SBO:0000176
  - !!omap
    - id: SHKK
    - name: shikimate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - skm5p_c: 1.0
      - skm_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03748 or MNJNJBIH_00429
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: SHKK
      - rhea: RHEA:13121
      - sbo: SBO:0000176
  - !!omap
    - id: DCYTtex
    - name: deoxycytidine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dcyt_e: -1.0
      - dcyt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00453
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: DCYTtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_gam_e
    - name: Exchange of 2-ammonio-2-deoxy-D-glucopyranose.
    - metabolites: !!omap
      - gam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gam_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACACtex
    - name: acetoacetate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - acac_e: -1.0
      - acac_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACACtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACNAMtex
    - name: N-acetylneuraminate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - acnam_e: -1.0
      - acnam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05330 or MNJNJBIH_01035 or MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: ACNAMtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ARBTNabcpp
    - name: Aerobactin transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_c: 1.0
      - __Ecoli_panGEMs__arbtn_fe3_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00189 and MNJNJBIH_00191 and MNJNJBIH_00190
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ARBTNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_inost_e
    - name: Exchange of myo-inositol.
    - metabolites: !!omap
      - inost_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_inost_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mobd_e
    - name: Exchange of molybdate.
    - metabolites: !!omap
      - mobd_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mobd_e
      - sbo: SBO:0000627
  - !!omap
    - id: NNDMBRT
    - name: Nicotinate-nucleotide dimethylbenzimidazole 
        phosphoribosyltransferase
    - metabolites: !!omap
      - 5prdmbz_c: 1.0
      - dmbzid_c: -1.0
      - h_c: 1.0
      - nac_c: 1.0
      - nicrnt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02175
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NNDMBRT
      - rhea: RHEA:11196
      - sbo: SBO:0000176
  - !!omap
    - id: DGSNtex
    - name: deoxyguanosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dgsn_e: -1.0
      - dgsn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DGSNtex
      - sbo: SBO:0000655
  - !!omap
    - id: THRA2
    - name: L-allo-Threonine Aldolase
    - metabolites: !!omap
      - acald_c: 1.0
      - athr__L_c: -1.0
      - gly_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02786 or MNJNJBIH_00967
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: THRA2
      - rhea: RHEA:26209
      - sbo: SBO:0000176
  - !!omap
    - id: ASO3t8pp
    - name: arsenite efflux via ATP hydrolysis (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - aso3_c: -1.0
      - aso3_p: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03883
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASO3t8pp:2
      - sbo: SBO:0000655
  - !!omap
    - id: H2Stex
    - name: h2s transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - h2s_e: -1.0
      - h2s_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: H2Stex:2
      - sbo: SBO:0000655
  - !!omap
    - id: PPK
    - name: polyphosphate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - pi_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02714
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: PPK
      - rhea: RHEA:29431
      - sbo: SBO:0000176
  - !!omap
    - id: EX_so4_e
    - name: Exchange of sulfate.
    - metabolites: !!omap
      - so4_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_so4_e
      - sbo: SBO:0000627
  - !!omap
    - id: SADH
    - name: Succinylarginine dihydrolase
    - metabolites: !!omap
      - co2_c: 1.0
      - h2o_c: -2.0
      - h_c: -2.0
      - nh4_c: 2.0
      - sucarg_c: -1.0
      - sucorn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01888
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SADH
      - rhea: RHEA:19533
      - sbo: SBO:0000176
  - !!omap
    - id: GUAPRT
    - name: guanine phosphoribosyltransferase
    - metabolites: !!omap
      - gmp_c: 1.0
      - gua_c: -1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00161 or MNJNJBIH_00287
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GUAPRT
      - rhea: RHEA:25424
      - sbo: SBO:0000176
  - !!omap
    - id: EX_phe__L_e
    - name: Exchange of L-phenylalanine zwitterion.
    - metabolites: !!omap
      - phe__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_phe__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_thr__L_e
    - name: Exchange of L-threonine zwitterion.
    - metabolites: !!omap
      - thr__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thr__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_uri_e
    - name: Exchange of uridine.
    - metabolites: !!omap
      - uri_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_uri_e
      - sbo: SBO:0000627
  - !!omap
    - id: ABUTD
    - name: Aminobutyraldehyde dehydrogenase
    - metabolites: !!omap
      - 4abut_c: 1.0
      - 4abutn_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01591
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ABUTD
      - rhea: RHEA:19105
      - sbo: SBO:0000176
  - !!omap
    - id: E4PD
    - name: Erythrose 4-phosphate dehydrogenase
    - metabolites: !!omap
      - 4per_c: 1.0
      - e4p_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03205 or MNJNJBIH_01923 or MNJNJBIH_01561
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: E4PD
      - rhea: RHEA:12056
      - sbo: SBO:0000176
  - !!omap
    - id: IG3PS
    - name: Imidazole-glycerol-3-phosphate synthase
    - metabolites: !!omap
      - aicar_c: 1.0
      - eig3p_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h_c: 1.0
      - prlp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02219 and MNJNJBIH_02221
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: IG3PS
      - rhea: RHEA:24793
      - sbo: SBO:0000176
  - !!omap
    - id: PDH
    - name: pyruvate dehydrogenase
    - metabolites: !!omap
      - accoa_c: 1.0
      - co2_c: 1.0
      - coa_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00146 and MNJNJBIH_00147 and MNJNJBIH_00145
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PDH
      - rhea: RHEA:28042
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MTHFR2
    - name: 5,10-methylenetetrahydrofolate reductase (NADH)
    - metabolites: !!omap
      - __Ecoli_panGEMs__5mthf_c: 1.0
      - h_c: -2.0
      - mlthf_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04401
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MTHFR2
      - sbo: SBO:0000176
  - !!omap
    - id: DMSOR2pp
    - name: Dimethyl sulfoxide reductase (Demethylmenaquinol 8) (periplasm)
    - metabolites: !!omap
      - 2dmmq8_c: 1.0
      - 2dmmql8_c: -1.0
      - dms_p: 1.0
      - dmso_p: -1.0
      - h2o_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02025 and MNJNJBIH_02026
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: DMSOR2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_nh4_e
    - name: Exchange of ammonium.
    - metabolites: !!omap
      - nh4_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_nh4_e
      - sbo: SBO:0000627
  - !!omap
    - id: DADK
    - name: deoxyadenylate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dadp_c: 1.0
      - damp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DADK
      - rhea: RHEA:23100
      - sbo: SBO:0000176
  - !!omap
    - id: DUTPDP
    - name: dUTP diphosphatase
    - metabolites: !!omap
      - dump_c: 1.0
      - dutp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04051 or MNJNJBIH_02447
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DUTPDP
      - rhea: RHEA:10248
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ddca_e
    - name: Exchange of dodecanoate.
    - metabolites: !!omap
      - ddca_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ddca_e
      - sbo: SBO:0000627
  - !!omap
    - id: HYD3pp
    - name: 'Hydrogenase (Demethylmenaquinone-8: 2 protons) (periplasm)'
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - 2dmmql8_c: 1.0
      - h2_c: -1.0
      - h_c: -2.0
      - h_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03306 and MNJNJBIH_03310 and MNJNJBIH_03309 
        and MNJNJBIH_03308
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: HYD3pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__NO3R1pp
    - name: Nitrate reductase (Ubiquinol-8) (periplasm)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - h_p: 2.0
      - no2_c: 1.0
      - no3_c: -1.0
      - q8_c: 1.0
      - q8h2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01615 and MNJNJBIH_01616 and MNJNJBIH_01614 
        and MNJNJBIH_01613) or (MNJNJBIH_01362 and MNJNJBIH_01365 and 
        MNJNJBIH_01364 and MNJNJBIH_01363)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__NO3R1pp
      - sbo: SBO:0000655
  - !!omap
    - id: NTP5
    - name: nucleoside-triphosphatase (CTP)
    - metabolites: !!omap
      - cdp_c: 1.0
      - ctp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04655
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTP5
      - rhea: RHEA:29387
      - sbo: SBO:0000176
  - !!omap
    - id: CELBpts
    - name: cellobiose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - 6pgg_c: 1.0
      - cellb_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02618 and (MNJNJBIH_01880 and MNJNJBIH_01879 
        and MNJNJBIH_01878) and MNJNJBIH_02617
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CELBpts
      - sbo: SBO:0000655
  - !!omap
    - id: FORt2pp
    - name: formate transport via proton symport (uptake only, periplasm)
    - metabolites: !!omap
      - for_c: 1.0
      - for_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01008 or MNJNJBIH_02705
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FORt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_r5p_e
    - name: Exchange of D-ribofuranose 5-phosphate(2-).
    - metabolites: !!omap
      - r5p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_r5p_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glyc2p_e
    - name: Exchange of glycerol 2-phosphate(2-).
    - metabolites: !!omap
      - glyc2p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyc2p_e
      - sbo: SBO:0000627
  - !!omap
    - id: MTAN
    - name: methylthioadenosine nucleosidase
    - metabolites: !!omap
      - 5mta_c: -1.0
      - 5mtr_c: 1.0
      - ade_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00199
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: MTAN
      - rhea: RHEA:13617
      - sbo: SBO:0000176
  - !!omap
    - id: DPR
    - name: 2-dehydropantoate 2-reductase
    - metabolites: !!omap
      - 2dhp_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pant__R_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00467 or MNJNJBIH_04202
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DPR
      - rhea: RHEA:16233
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__halipa_e
    - name: Hepta-acylated KDO(2)-lipid (A) exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__halipa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__halipa_e
      - sbo: SBO:0000627
  - !!omap
    - id: MANptspp
    - name: D-mannose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - man6p_c: 1.0
      - man_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01967 and MNJNJBIH_01966 and MNJNJBIH_01965 
        and MNJNJBIH_02618 and MNJNJBIH_02617
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MANptspp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cmp_e
    - name: Exchange of cytidine 5'-monophosphate(2-).
    - metabolites: !!omap
      - cmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTD8
    - name: 5'-nucleotidase (dGMP)
    - metabolites: !!omap
      - dgmp_c: -1.0
      - dgsn_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_02493 or MNJNJBIH_03760
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD8
      - rhea: RHEA:29379
      - sbo: SBO:0000176
  - !!omap
    - id: GALCTD
    - name: galactarate dehydratase
    - metabolites: !!omap
      - 5dh4dglc_c: 1.0
      - galct__D_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03456
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GALCTD
      - rhea: RHEA:16005
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__malthx_e
    - name: Maltohexaose exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthx_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__malthx_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MLTG4
    - name: Maltodextrin glucosidase (maltohexaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthx_c: -1.0
      - __Ecoli_panGEMs__maltpt_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00445
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTG4
      - sbo: SBO:0000176
  - !!omap
    - id: UDPGDC
    - name: UDP-glucuronate C-4'' decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - udpLa4o_c: 1.0
      - udpglcur_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02451
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: UDPGDC
      - rhea: RHEA:24702
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP4
    - name: purine-nucleoside phosphorylase (Deoxyguanosine)
    - metabolites: !!omap
      - 2dr1p_c: 1.0
      - dgsn_c: -1.0
      - gua_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02607 or MNJNJBIH_04860
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PUNP4
      - rhea: RHEA:27738
      - sbo: SBO:0000176
  - !!omap
    - id: AMAOTr
    - name: adenosylmethionine-8-amino-7-oxononanoate transaminase
    - metabolites: !!omap
      - 8aonn_c: -1.0
      - amet_c: -1.0
      - amob_c: 1.0
      - dann_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00845
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: AMAOTr
      - sbo: SBO:0000176
  - !!omap
    - id: EX_csn_e
    - name: Exchange of cytosine.
    - metabolites: !!omap
      - csn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_csn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_etoh_e
    - name: Exchange of ethanol.
    - metabolites: !!omap
      - etoh_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_etoh_e
      - sbo: SBO:0000627
  - !!omap
    - id: G6PP
    - name: glucose-6-phosphate phosphatase
    - metabolites: !!omap
      - g6p_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00909 or MNJNJBIH_04264
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: G6PP
      - rhea: RHEA:16689
      - sbo: SBO:0000176
  - !!omap
    - id: MMCD
    - name: Methylmalonyl-CoA decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -1.0
      - mmcoa__S_c: -1.0
      - ppcoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03197
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MMCD
      - rhea: RHEA:61340
      - sbo: SBO:0000176
  - !!omap
    - id: GLNS
    - name: glutamine synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: 1.0
      - glu__L_c: -1.0
      - h_c: 1.0
      - nh4_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04314
    - subsystem: Glutamate Metabolism
    - annotation: !!omap
      - biggr: GLNS
      - rhea: RHEA:16169
      - sbo: SBO:0000176
  - !!omap
    - id: TYMtex
    - name: tyramine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tym_e: -1.0
      - tym_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TYMtex
      - sbo: SBO:0000655
  - !!omap
    - id: GTHS
    - name: glutathione synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glucys_c: -1.0
      - gly_c: -1.0
      - gthrd_c: 1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03224
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GTHS
      - rhea: RHEA:13557
      - sbo: SBO:0000176
  - !!omap
    - id: EX_g3pe_e
    - name: sn-Glycero-3-phosphoethanolamine exchange
    - metabolites: !!omap
      - g3pe_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g3pe_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pacald_e
    - name: Exchange of phenylacetaldehyde.
    - metabolites: !!omap
      - pacald_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pacald_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_his__L_e
    - name: Exchange of L-histidine zwitterion.
    - metabolites: !!omap
      - his__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_his__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_k_e
    - name: Exchange of potassium(1+).
    - metabolites: !!omap
      - k_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_k_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_na1_e
    - name: Exchange of sodium(1+).
    - metabolites: !!omap
      - na1_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_na1_e
      - sbo: SBO:0000627
  - !!omap
    - id: ACACT1r
    - name: acetyl-CoA C-acetyltransferase
    - metabolites: !!omap
      - aacoa_c: 1.0
      - accoa_c: -2.0
      - coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02419 or MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT1r
      - rhea: RHEA:21036
      - sbo: SBO:0000176
  - !!omap
    - id: ARGORNt7pp
    - name: arginine/ornithine antiporter (periplasm)
    - metabolites: !!omap
      - arg__L_c: 1.0
      - arg__L_p: -1.0
      - orn__L_c: -1.0
      - orn__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01730
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARGORNt7pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_dmso_e
    - name: Exchange of dimethyl sulfoxide.
    - metabolites: !!omap
      - dmso_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dmso_e
      - sbo: SBO:0000627
  - !!omap
    - id: CMPtex
    - name: CMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cmp_e: -1.0
      - cmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: DUMPtex
    - name: dUMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dump_e: -1.0
      - dump_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DUMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: XMPtex
    - name: XMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - xmp_e: -1.0
      - xmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: XMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__3PEPTtex
    - name: LalaDgluMdap (tripeptide) transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_e: -1.0
      - __Ecoli_panGEMs__LalaDgluMdap_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3PEPTtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_12ppd__S_e
    - name: Exchange of (S)-propane-1,2-diol.
    - metabolites: !!omap
      - 12ppd__S_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_12ppd__S_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pppn_e
    - name: Exchange of 3-phenylpropionate.
    - metabolites: !!omap
      - pppn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pppn_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__ANHGMtex
    - name: GlcNAc-anhMurNAc transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm_e: -1.0
      - __Ecoli_panGEMs__anhgm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ANHGMtex
      - sbo: SBO:0000655
  - !!omap
    - id: MALTptspp
    - name: maltose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - malt6p_c: 1.0
      - malt_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01747 and MNJNJBIH_02619 and MNJNJBIH_02617 
        and MNJNJBIH_02618
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MALTptspp
      - sbo: SBO:0000655
  - !!omap
    - id: UDPKAAT
    - name: UDP-4''-ketopentose:UDP-4-amino-4-deoxy-L-arabinose aminotransferase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - udpLa4n_c: 1.0
      - udpLa4o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02449
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: UDPKAAT
      - rhea: RHEA:24710
      - sbo: SBO:0000176
  - !!omap
    - id: ULA4NFT
    - name: UDP-L-Ara4N formyltransferase
    - metabolites: !!omap
      - 10fthf_c: -1.0
      - h_c: 1.0
      - thf_c: 1.0
      - udpLa4fn_c: 1.0
      - udpLa4n_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02451
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: ULA4NFT
      - rhea: RHEA:24706
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acgam1p_e
    - name: Exchange of N-acetyl-alpha-D-glucosamine 1-phosphate(2-).
    - metabolites: !!omap
      - acgam1p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acgam1p_e
      - sbo: SBO:0000627
  - !!omap
    - id: NTD11pp
    - name: 5'-nucleotidase (IMP)
    - metabolites: !!omap
      - h2o_p: -1.0
      - imp_p: -1.0
      - ins_p: 1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531 or MNJNJBIH_04546
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD11pp
      - rhea: RHEA:27718
      - sbo: SBO:0000176
  - !!omap
    - id: EX_galt_e
    - name: Exchange of galactitol.
    - metabolites: !!omap
      - galt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galt_e
      - sbo: SBO:0000627
  - !!omap
    - id: DKGLCNR2x
    - name: 2,5-diketo-D-gluconate reductase (NADH)
    - metabolites: !!omap
      - 25dkglcn_c: -1.0
      - 5dglcn_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DKGLCNR2x
      - rhea: RHEA:30103
      - sbo: SBO:0000176
  - !!omap
    - id: ACGS
    - name: N-acetylglutamate synthase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acglu_c: 1.0
      - coa_c: 1.0
      - glu__L_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03072
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ACGS
      - rhea: RHEA:24292
      - sbo: SBO:0000176
  - !!omap
    - id: PDE1
    - name: 3',5'-cyclic-nucleotide phosphodiesterase
    - metabolites: !!omap
      - amp_c: 1.0
      - camp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01637 or MNJNJBIH_03345
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PDE1
      - rhea: RHEA:25277
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__UPLA4FNT
    - name: Undecaprenyl phosphate-L-Ara4FN transferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__uLa4fn_c: 1.0
      - udcpp_c: -1.0
      - udpLa4fn_c: -1.0
      - udp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02450
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__UPLA4FNT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__UPLA4FNF
    - name: Undecaprenyl phosphate-L-Ara4FN formylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__uLa4fn_c: -1.0
      - __Ecoli_panGEMs__uLa4n_c: 1.0
      - for_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02452
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__UPLA4FNF
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ULA4Ntppi
    - name: Transport (cytoplasm to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__uLa4n_c: -1.0
      - __Ecoli_panGEMs__uLa4n_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02455 and MNJNJBIH_02454
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ULA4Ntppi
      - sbo: SBO:0000655
  - !!omap
    - id: HEPT1
    - name: heptosyltransferase I (LPS core synthesis)
    - metabolites: !!omap
      - adp_c: 1.0
      - adphep_LD_c: -1.0
      - h_c: 1.0
      - hlipa_c: 1.0
      - lipa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04030
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: HEPT1
      - rhea: RHEA:28402
      - sbo: SBO:0000176
  - !!omap
    - id: FALDtex
    - name: formaldehyde transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fald_e: -1.0
      - fald_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FALDtex
      - sbo: SBO:0000655
  - !!omap
    - id: MCITD
    - name: 2-methylcitrate dehydratase
    - metabolites: !!omap
      - 2mcacn_c: 1.0
      - 2mcit_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00366
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MCITD
      - rhea: RHEA:57496
      - sbo: SBO:0000176
  - !!omap
    - id: CU2tex
    - name: copper (Cu+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cu2_e: -1.0
      - cu2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CU2tex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_glcur1p_e
    - name: Exchange of 1-phosphonato-alpha-D-glucuronate(3-).
    - metabolites: !!omap
      - glcur1p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glcur1p_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLCATr
    - name: D-glucose O-acetyltransferase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acglc__D_c: 1.0
      - coa_c: 1.0
      - glc__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00506
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLCATr
      - sbo: SBO:0000176
  - !!omap
    - id: ALR2
    - name: aldose reductase (methylglyoxal)
    - metabolites: !!omap
      - acetol_c: 1.0
      - h_c: -1.0
      - mthgxl_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03326 or MNJNJBIH_00245 or MNJNJBIH_01925 or 
        MNJNJBIH_03315
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: ALR2
      - rhea: RHEA:27986
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AMALT2
    - name: Amylomaltase (maltotetraose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltpt_c: 1.0
      - __Ecoli_panGEMs__maltttr_c: -1.0
      - glc__D_c: 1.0
      - malt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03778
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AMALT2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTP1
    - name: Maltodextrin phosphorylase (maltopentaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltpt_c: -1.0
      - __Ecoli_panGEMs__maltttr_c: 1.0
      - g1p_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03779
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTP1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__HEPT2
    - name: Heptosyltransferase II (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hhlipa_c: 1.0
      - adp_c: 1.0
      - adphep_LD_c: -1.0
      - h_c: 1.0
      - hlipa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04029
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__HEPT2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FECRMUtex
    - name: Ferrichrome (minus Fe) secretion (to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_un_e: 1.0
      - __Ecoli_panGEMs__fecrm_un_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMUtex
      - sbo: SBO:0000655
  - !!omap
    - id: ALAALAr
    - name: D-alanine-D-alanine ligase (reversible)
    - metabolites: !!omap
      - adp_c: 1.0
      - ala__D_c: -2.0
      - alaala_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00421 or MNJNJBIH_00125
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: ALAALAr
      - rhea: RHEA:11224
      - sbo: SBO:0000176
  - !!omap
    - id: EX_thrp_e
    - name: Exchange of O-phosphonato-L-threonine(2-).
    - metabolites: !!omap
      - thrp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thrp_e
      - sbo: SBO:0000627
  - !!omap
    - id: CLtex
    - name: chloride (Cl-1) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cl_e: -1.0
      - cl_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CLtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: CYSDtex
    - name: D-cysteine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cys__D_e: -1.0
      - cys__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CYSDtex
      - sbo: SBO:0000655
  - !!omap
    - id: CYSDabcpp
    - name: D-cysteine uptake via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__D_c: 1.0
      - cys__D_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYSDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: HXAND
    - name: hypoxanthine dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - hxan_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - xan_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03139 and MNJNJBIH_03140 and MNJNJBIH_03141
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: HXAND
      - sbo: SBO:0000176
  - !!omap
    - id: EX_fald_e
    - name: Exchange of formaldehyde.
    - metabolites: !!omap
      - fald_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fald_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pydxn_e
    - name: Exchange of pyridoxine.
    - metabolites: !!omap
      - pydxn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pydxn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_acgal_e
    - name: Exchange of N-acetyl-alpha-D-galactosamine.
    - metabolites: !!omap
      - acgal_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acgal_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_so2_e
    - name: sulfur dioxide exchange
    - metabolites: !!omap
      - so2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_so2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_dms_e
    - name: Exchange of dimethyl sulfide.
    - metabolites: !!omap
      - dms_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dms_e
      - sbo: SBO:0000627
  - !!omap
    - id: GMPtex
    - name: GMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gmp_e: -1.0
      - gmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: IMPtex
    - name: IMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - imp_e: -1.0
      - imp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: IMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: G3PItex
    - name: glycero-3-phospho-1-inositol transport via diffusion (extracellular 
        to periplasm)
    - metabolites: !!omap
      - g3pi_e: -1.0
      - g3pi_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G3PItex
      - sbo: SBO:0000655
  - !!omap
    - id: G3PGtex
    - name: glycerophoglycerol transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - g3pg_e: -1.0
      - g3pg_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G3PGtex
      - sbo: SBO:0000655
  - !!omap
    - id: G3PEtex
    - name: glycero-3-phosphoethanolamine transport via diffusion (extracellular
        to periplasm)
    - metabolites: !!omap
      - g3pe_e: -1.0
      - g3pe_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G3PEtex
      - sbo: SBO:0000655
  - !!omap
    - id: G3PCtex
    - name: glycero-3-phosphocholine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - g3pc_e: -1.0
      - g3pc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G3PCtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MOAT3C
    - name: 3-deoxy-D-manno-octulosonic acid transferase III (LPS core 
        biosynthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__kphphhlipa_c: 1.0
      - __Ecoli_panGEMs__phphhlipa_c: -1.0
      - ckdo_c: -1.0
      - cmp_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04033
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MOAT3C
      - sbo: SBO:0000176
  - !!omap
    - id: UMPtex
    - name: UMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ump_e: -1.0
      - ump_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: UMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: G1Ptex
    - name: D-glucose 1-phosphate transport via diffusion
    - metabolites: !!omap
      - g1p_e: -1.0
      - g1p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: G1Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: ADNK1
    - name: adenosine kinase
    - metabolites: !!omap
      - adn_c: -1.0
      - adp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00523
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ADNK1
      - rhea: RHEA:20824
      - sbo: SBO:0000176
  - !!omap
    - id: CUt3
    - name: copper transport out via proton antiport
    - metabolites: !!omap
      - cu_c: -1.0
      - cu_e: 1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00606 and MNJNJBIH_00608 and MNJNJBIH_00607 
        and MNJNJBIH_00609
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CUt3
      - sbo: SBO:0000655
  - !!omap
    - id: ZN2t3pp
    - name: zinc (Zn+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - zn2_c: -1.0
      - zn2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04366 or MNJNJBIH_00821
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ZN2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: SKMtex
    - name: shikimate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - skm_e: -1.0
      - skm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SKMtex
      - sbo: SBO:0000655
  - !!omap
    - id: MNt2pp
    - name: manganese (Mn+2) transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - mn2_c: 1.0
      - mn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02589
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLCabcpp
    - name: D-glucose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glc__D_c: 1.0
      - glc__D_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02337 and MNJNJBIH_02336 and MNJNJBIH_02338
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLCabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__GALT1
    - name: Galactosyltransferase I (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__gagicolipa_c: 1.0
      - __Ecoli_panGEMs__gicolipa_c: -1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04037
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GALT1
      - sbo: SBO:0000176
  - !!omap
    - id: MNtex
    - name: Manganese (Mn+2) transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - mn2_e: -1.0
      - mn2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MNtex
      - sbo: SBO:0000655
  - !!omap
    - id: GAL1Ptex
    - name: D-galactose 1-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - gal1p_e: -1.0
      - gal1p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GAL1Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__GLCTR2
    - name: Glucosyltransferase II (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__gagicolipa_c: -1.0
      - __Ecoli_panGEMs__ggagicolipa_c: 1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04036
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLCTR2
      - sbo: SBO:0000176
  - !!omap
    - id: G2PPpp
    - name: glycerol 2-phosphate phosphatase (periplasmic)
    - metabolites: !!omap
      - glyc2p_p: -1.0
      - glyc_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04546 or MNJNJBIH_00423
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: G2PPpp
      - rhea: RHEA:13105
      - sbo: SBO:0000176
  - !!omap
    - id: UDPGPpp
    - name: UDPglucose pyrophosphohydrolase
    - metabolites: !!omap
      - g1p_p: 1.0
      - h2o_p: -1.0
      - h_p: 2.0
      - udpg_p: -1.0
      - ump_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00531
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: UDPGPpp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_acgal1p_e
    - name: Exchange of N-acetyl-alpha-D-galactosamine 1-phosphate(2-).
    - metabolites: !!omap
      - acgal1p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acgal1p_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cyan_e
    - name: Exchange of hydrogen cyanide.
    - metabolites: !!omap
      - cyan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cyan_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tyrp_e
    - name: Phosphotyrosine exchange
    - metabolites: !!omap
      - tyrp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tyrp_e
      - sbo: SBO:0000627
  - !!omap
    - id: O2Stex
    - name: superoxide anion transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - o2s_e: -1.0
      - o2s_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: O2Stex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__HEPK1
    - name: LPS heptose kinase I (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hhlipa_c: -1.0
      - __Ecoli_panGEMs__phhlipa_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04039
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__HEPK1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__HEPT3
    - name: Heptosyltransferase III (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hphhlipa_c: 1.0
      - __Ecoli_panGEMs__phhlipa_c: -1.0
      - adp_c: 1.0
      - adphep_LD_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04041
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__HEPT3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__HEPK2
    - name: LPS heptose kinase II (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hphhlipa_c: -1.0
      - __Ecoli_panGEMs__phphhlipa_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04034
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__HEPK2
      - sbo: SBO:0000176
  - !!omap
    - id: ALDD3y
    - name: aldehyde dehydrogenase (propanal, NADP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ppal_c: -1.0
      - prpnte_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03991 or MNJNJBIH_04777 or MNJNJBIH_03325
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALDD3y
      - rhea: RHEA:27918
      - sbo: SBO:0000176
  - !!omap
    - id: EX_uacgam_e
    - name: Exchange of UDP-N-acetyl-alpha-D-glucosamine(2-).
    - metabolites: !!omap
      - uacgam_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_uacgam_e
      - sbo: SBO:0000627
  - !!omap
    - id: Kt3pp
    - name: potassium transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - k_c: -1.0
      - k_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03700 or MNJNJBIH_00072 or MNJNJBIH_01352 or 
        MNJNJBIH_00934
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: Kt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_udpacgal_e
    - name: Exchange of UDP-N-acetyl-alpha-D-galactosamine(2-).
    - metabolites: !!omap
      - udpacgal_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_udpacgal_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_udpg_e
    - name: Exchange of UDP-alpha-D-glucose(2-).
    - metabolites: !!omap
      - udpg_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_udpg_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_udpgal_e
    - name: Exchange of UDP-alpha-D-galactose(2-).
    - metabolites: !!omap
      - udpgal_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_udpgal_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_udpglcur_e
    - name: Exchange of UDP-alpha-D-glucuronate(3-).
    - metabolites: !!omap
      - udpglcur_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_udpglcur_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__14glucan_e
    - name: 1,4-alpha-D-glucan exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__14glucan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__14glucan_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pser_e
    - name: Exchange of O-phosphonato-L-serine(2-).
    - metabolites: !!omap
      - pser_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pser_e
      - sbo: SBO:0000627
  - !!omap
    - id: R5PP
    - name: ribose 5-phosphate phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - r5p_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00909 or MNJNJBIH_02927 or MNJNJBIH_00726 or 
        MNJNJBIH_04126
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: R5PP
      - rhea: RHEA:29471
      - sbo: SBO:0000176
  - !!omap
    - id: EX_xmp_e
    - name: Exchange of 5'-xanthylate(2-).
    - metabolites: !!omap
      - xmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_damp_e
    - name: Exchange of 2'-deoxyadenosine 5'-monophosphate(2-).
    - metabolites: !!omap
      - damp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_damp_e
      - sbo: SBO:0000627
  - !!omap
    - id: CYSSADS
    - name: L-cysteine sulfinic acid desulfurase
    - metabolites: !!omap
      - 3sala_c: -1.0
      - ala__L_c: 1.0
      - h_c: -2.0
      - so2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03066 or MNJNJBIH_01816
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: CYSSADS:2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dimp_e
    - name: Exchange of 2'-deoxyinosine 5'-phosphate(2-).
    - metabolites: !!omap
      - dimp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dimp_e
      - sbo: SBO:0000627
  - !!omap
    - id: CPPPGO2
    - name: Oxygen Independent coproporphyrinogen-III oxidase
    - metabolites: !!omap
      - amet_c: -2.0
      - co2_c: 2.0
      - cpppg3_c: -1.0
      - dad_5_c: 2.0
      - met__L_c: 2.0
      - pppg9_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04308
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CPPPGO2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_isetac_e
    - name: Exchange of isethionate.
    - metabolites: !!omap
      - isetac_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_isetac_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__AGM3PH
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide beta 
        -1,4-N-acetylglucosaminidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm3p_c: -1.0
      - __Ecoli_panGEMs__anhm3p_c: 1.0
      - acgam_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01244
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM3PH
      - sbo: SBO:0000176
  - !!omap
    - id: HOMt2pp
    - name: L-homoserineserine efflux via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - hom__L_c: -1.0
      - hom__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00896 or MNJNJBIH_04262
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HOMt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_aso3_e
    - name: arsenite exchange
    - metabolites: !!omap
      - aso3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_aso3_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tcynt_e
    - name: Exchange of thiocyanate.
    - metabolites: !!omap
      - tcynt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tcynt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__fe3dhbzs_e
    - name: Ferric 2,3-dihydroxybenzoylserine exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dhbzs_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fe3dhbzs_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__AGM3PApp
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_p: 1.0
      - __Ecoli_panGEMs__anhgm3p_p: -1.0
      - __Ecoli_panGEMs__anhgm_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04667 or MNJNJBIH_02639 or MNJNJBIH_03071
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM3PApp
      - sbo: SBO:0000176
  - !!omap
    - id: PPPGO
    - name: protoporphyrinogen oxidase (aerobic)
    - metabolites: !!omap
      - h2o_c: 3.0
      - o2_c: -1.5
      - ppp9_c: 1.0
      - pppg9_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04289
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PPPGO
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__feoxam_un_e
    - name: Ferroxamine minus Fe(3) exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_un_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__feoxam_un_e
      - sbo: SBO:0000627
  - !!omap
    - id: HOMtex
    - name: L-homoserine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - hom__L_e: -1.0
      - hom__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: HOMtex
      - sbo: SBO:0000655
  - !!omap
    - id: SO2tex
    - name: SO2 transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - so2_e: -1.0
      - so2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SO2tex
      - sbo: SBO:0000655
  - !!omap
    - id: LDH_D2
    - name: D-lactate dehydrogenase
    - metabolites: !!omap
      - lac__D_c: -1.0
      - pyr_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02320
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: LDH_D2
      - rhea: RHEA:29079
      - sbo: SBO:0000176
  - !!omap
    - id: EX_g3pc_e
    - name: Exchange of choline alfoscerate.
    - metabolites: !!omap
      - g3pc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g3pc_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_g3pg_e
    - name: Exchange of sn-glycero-3-phosphoglycerol(1-).
    - metabolites: !!omap
      - g3pg_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g3pg_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_g3pi_e
    - name: Exchange of 1-(sn-glycero-3-O-phosphonato)-1D-myo-inositol.
    - metabolites: !!omap
      - g3pi_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g3pi_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__SHCHF
    - name: Sirohydrochlorin ferrochelatase
    - metabolites: !!omap
      - __Ecoli_panGEMs__scl_c: -1.0
      - fe2_c: -1.0
      - h_c: 3.0
      - sheme_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03723
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__SHCHF
      - sbo: SBO:0000176
  - !!omap
    - id: SUCOAS
    - name: succinyl-CoA synthetase (ADP-forming)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - pi_c: 1.0
      - succ_c: -1.0
      - succoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00794 and MNJNJBIH_00793
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: SUCOAS
      - rhea: RHEA:17661
      - sbo: SBO:0000176
  - !!omap
    - id: SUCBZL
    - name: o-succinylbenzoate-CoA ligase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - ppi_c: 1.0
      - sbzcoa_c: 1.0
      - sucbz_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02457
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: SUCBZL
      - rhea: RHEA:17009
      - sbo: SBO:0000176
  - !!omap
    - id: CYSDDS
    - name: D-cysteine desulfhydrase
    - metabolites: !!omap
      - cys__D_c: -1.0
      - h2o_c: -1.0
      - h2s_c: 1.0
      - nh4_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02078
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: CYSDDS:2
      - rhea: RHEA:11268
      - sbo: SBO:0000176
  - !!omap
    - id: CYStpp
    - name: L-cysteine export via facilitated transport
    - metabolites: !!omap
      - cys__L_c: -1.0
      - cys__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02820 or MNJNJBIH_01687
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYStpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_g3ps_e
    - name: Exchange of sn-glycero-3-phosphoserine(1-).
    - metabolites: !!omap
      - g3ps_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g3ps_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_peamn_e
    - name: Exchange of 2-phenylethanaminium.
    - metabolites: !!omap
      - peamn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_peamn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_34dhpac_e
    - name: Exchange of 3,4-dihydroxyphenylacetaldehyde.
    - metabolites: !!omap
      - 34dhpac_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_34dhpac_e
      - sbo: SBO:0000627
  - !!omap
    - id: ATPM:2
    - name: ATP maintenance requirement
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00703 or MNJNJBIH_04655
    - subsystem: Biomass and maintenance functions
    - annotation: !!omap
      - biggr: ATPM
      - rhea: RHEA:13065
      - sbo: SBO:0000176
  - !!omap
    - id: DAMPtex
    - name: dAMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - damp_e: -1.0
      - damp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DAMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: DCMPtex
    - name: dCMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dcmp_e: -1.0
      - dcmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DCMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: DGMPtex
    - name: dGMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dgmp_e: -1.0
      - dgmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DGMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: DTMPtex
    - name: dTMP transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - dtmp_e: -1.0
      - dtmp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DTMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACSERtpp
    - name: O-Acetyl-L-serine export via facilitated transport
    - metabolites: !!omap
      - acser_c: -1.0
      - acser_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02820 or MNJNJBIH_01687
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACSERtpp
      - sbo: SBO:0000655
  - !!omap
    - id: ACSERtex
    - name: O-Acetyl-L-serine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - acser_e: -1.0
      - acser_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ACSERtex
      - sbo: SBO:0000655
  - !!omap
    - id: LALDO3
    - name: L-Lactaldehyde:NADP+ 1-oxidoreductase
    - metabolites: !!omap
      - h_c: -1.0
      - lald__L_c: 1.0
      - mthgxl_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: LALDO3
      - rhea: RHEA:21748
      - sbo: SBO:0000176
  - !!omap
    - id: NTP10
    - name: nucleoside-triphosphatase (ITP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04655 or MNJNJBIH_00003
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTP10
      - rhea: RHEA:28330
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PRAIS
    - name: Phosphoribosylaminoimidazole synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__air_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - fpram_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02712
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PRAIS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GDMANE
    - name: GDP-4-dehydro-6-deoxy-D-mannose epimerase
    - metabolites: !!omap
      - __Ecoli_panGEMs__gdpofuc_DUP1_c: -1.0
      - gdpofuc_c:-2: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02239
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GDMANE
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG120
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg120_c: -1.0
      - __Ecoli_panGEMs__apg120_c: 1.0
      - __Ecoli_panGEMs__pg120_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1E140pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C14:0) (periplasm)
    - metabolites: !!omap
      - 2agpe140_p: 1.0
      - __Ecoli_panGEMs__pe140_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1E140pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL2E140
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:0)
    - metabolites: !!omap
      - 2agpe140_c: -1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL2E140
      - sbo: SBO:0000176
  - !!omap
    - id: PLIPA1E160pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C16:0) (periplasm)
    - metabolites: !!omap
      - 2agpe160_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
      - pe160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PLIPA1E160pp
      - sbo: SBO:0000176
  - !!omap
    - id: GALKr
    - name: galactokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gal1p_c: 1.0
      - gal_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00827
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GALKr
      - rhea: RHEA:13553
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1E161pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C16:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe161_p: 1.0
      - __Ecoli_panGEMs__pe161_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1E161pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL2E180
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:0)
    - metabolites: !!omap
      - 2agpe180_c: -1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ocdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL2E180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G161
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg161_c: -1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G181
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg181_c: -1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ocdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPE120tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C12:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe120_c: 1.0
      - __Ecoli_panGEMs__2agpe120_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPE120tipp
      - sbo: SBO:0000655
  - !!omap
    - id: HXCT
    - name: Acetyl-CoA:hexanoate-CoA transferase
    - metabolites: !!omap
      - ac_c: 1.0
      - accoa_c: -1.0
      - hxa_c: -1.0
      - hxcoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02417 and MNJNJBIH_02416
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HXCT
      - sbo: SBO:0000176
  - !!omap
    - id: 2AGPEAT160
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:0)
    - metabolites: !!omap
      - 2agpe160_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - hdca_c: -1.0
      - pe160_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: 2AGPEAT160
      - sbo: SBO:0000176
  - !!omap
    - id: PANTS
    - name: pantothenate synthase
    - metabolites: !!omap
      - ala_B_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pant__R_c: -1.0
      - pnto__R_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00169
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PANTS
      - rhea: RHEA:10912
      - sbo: SBO:0000176
  - !!omap
    - id: G3PGabcpp
    - name: sn-glycerol-3-phosphoglycerol transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g3pg_c: 1.0
      - g3pg_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03820 and MNJNJBIH_03821 and MNJNJBIH_03823 
        and MNJNJBIH_03822
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: G3PGabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: G3PIabcpp
    - name: sn-glycerol-3-phosphoethanolamine transport via ABC system 
        (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g3pi_c: 1.0
      - g3pi_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03820 and MNJNJBIH_03821 and MNJNJBIH_03823 
        and MNJNJBIH_03822
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: G3PIabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: DURADx
    - name: dihydrouracil dehydrogenase (NAD)
    - metabolites: !!omap
      - 56dura_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - ura_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02335 and MNJNJBIH_02334
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DURADx
      - rhea: RHEA:20189
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH7
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
    - metabolites: !!omap
      - 3hhdcoa_c: -1.0
      - h2o_c: 1.0
      - hdd2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02546 or MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ECOAH7
      - rhea: RHEA:31163
      - sbo: SBO:0000176
  - !!omap
    - id: G1PPpp
    - name: Glucose-1-phosphatase
    - metabolites: !!omap
      - g1p_p: -1.0
      - glc__D_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01124 or MNJNJBIH_00423
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: G1PPpp
      - sbo: SBO:0000176
  - !!omap
    - id: GALCTND
    - name: galactonate dehydratase
    - metabolites: !!omap
      - 2dh3dgal_c: 1.0
      - galctn__D_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04122
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GALCTND
      - rhea: RHEA:18649
      - sbo: SBO:0000176
  - !!omap
    - id: GCALDD
    - name: Glycolaldehyde dehydrogenase
    - metabolites: !!omap
      - gcald_c: -1.0
      - glyclt_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01559
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: GCALDD
      - sbo: SBO:0000176
  - !!omap
    - id: HISTP_1
    - name: histidinol-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - hisp_c: -1.0
      - histd_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02218
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: HISTP_1
      - rhea: RHEA:14465
      - sbo: SBO:0000176
  - !!omap
    - id: G3PSabcpp
    - name: sn-glycerol-3-phosphoserine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g3ps_c: 1.0
      - g3ps_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03820 and MNJNJBIH_03821 and MNJNJBIH_03823 
        and MNJNJBIH_03822
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: G3PSabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: QMO2
    - name: quinol monooxygenase (Ubiquinol-8)
    - metabolites: !!omap
      - h_c: 2.0
      - o2_c: -2.0
      - o2s_c: 2.0
      - q8_c: 1.0
      - q8h2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03342
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: QMO2
      - rhea: RHEA:29175
      - sbo: SBO:0000176
  - !!omap
    - id: QMO3
    - name: quinol monooxygenase (menaquinol 8)
    - metabolites: !!omap
      - h_c: 2.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - o2_c: -2.0
      - o2s_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03342
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: QMO3
      - rhea: RHEA:29183
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2E141
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe141_c: -1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ttdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2E141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2E161
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe161_c: -1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2E161
      - sbo: SBO:0000176
  - !!omap
    - id: LDH_D
    - name: D-lactate dehydrogenase
    - metabolites: !!omap
      - h_c: 1.0
      - lac__D_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01521
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: LDH_D
      - rhea: RHEA:16369
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AMALT4
    - name: Amylomaltase (maltohexaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthp_c: 1.0
      - __Ecoli_panGEMs__malthx_c: -1.0
      - glc__D_c: 1.0
      - malt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03778
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AMALT4
      - sbo: SBO:0000176
  - !!omap
    - id: NTD11
    - name: 5'-nucleotidase (IMP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - imp_c: -1.0
      - ins_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03002 or MNJNJBIH_03760
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTD11
      - rhea: RHEA:27718
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2E181
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe181_c: -1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ocdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2E181
      - sbo: SBO:0000176
  - !!omap
    - id: YUMPS
    - name: yUMP synthetase
    - metabolites: !!omap
      - h2o_c: 1.0
      - psd5p_c: 1.0
      - r5p_c: -1.0
      - ura_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02353
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: YUMPS
      - rhea: RHEA:18337
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G180
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg180_c: -1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ocdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G141
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg141_c: -1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ttdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA120tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C12:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2ddecg3p_c: 1.0
      - __Ecoli_panGEMs__2ddecg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA120tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG180tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg180_c: 1.0
      - __Ecoli_panGEMs__2agpg180_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG180tipp
      - sbo: SBO:0000655
  - !!omap
    - id: IPDDI
    - name: isopentenyl-diphosphate D-isomerase
    - metabolites: !!omap
      - dmpp_c: 1.0
      - ipdp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03162
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: IPDDI
      - rhea: RHEA:23284
      - sbo: SBO:0000176
  - !!omap
    - id: ORNDC
    - name: Ornithine Decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -1.0
      - orn__L_c: -1.0
      - ptrc_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03244 or MNJNJBIH_00747
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ORNDC
      - rhea: RHEA:22964
      - sbo: SBO:0000176
  - !!omap
    - id: UPP3MT
    - name: uroporphyrinogen methyltransferase
    - metabolites: !!omap
      - ahcys_c: 2.0
      - amet_c: -2.0
      - h_c: 1.0
      - pre2_c: 1.0
      - uppg3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03723
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: UPP3MT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__KAS15
    - name: Beta-ketoacyl-ACP synthase (2)
    - metabolites: !!omap
      - __Ecoli_panGEMs__actACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - accoa_c: -1.0
      - co2_c: 1.0
      - coa_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01228
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__KAS15
      - sbo: SBO:0000176
  - !!omap
    - id: ALAALAtex
    - name: D-alanyl-D-alanine (DalaDala) transport via diffusion (extracellular
        to periplasm)
    - metabolites: !!omap
      - alaala_e: -1.0
      - alaala_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ALAALAtex
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAL181t2pp
    - name: fatty-acid-CoA ligase (octadecenoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - ocdcea_p: -1.0
      - octdececoa_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01952 or MNJNJBIH_01841
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL181t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__T2DECAI
    - name: Trans-2-decenoyl-ACP isomerase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdec3eACP_c: 1.0
      - __Ecoli_panGEMs__tdec2eACP_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__T2DECAI
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT180
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg180_c: -1.0
      - __Ecoli_panGEMs__pg180_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ocdca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT181
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg181_c: -1.0
      - __Ecoli_panGEMs__pg181_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ocdcea_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS161
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ocpalm9eACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - __Ecoli_panGEMs__tdeACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS161
      - sbo: SBO:0000176
  - !!omap
    - id: DHQS
    - name: 3-dehydroquinate synthase
    - metabolites: !!omap
      - 2dda7p_c: -1.0
      - 3dhq_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03747
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: DHQS
      - rhea: RHEA:21968
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR141y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__t3c7mrseACP_c: -1.0
      - __Ecoli_panGEMs__tdeACP_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR141y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR161x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hdeACP_c: 1.0
      - __Ecoli_panGEMs__t3c9palmeACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR161x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG141tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg141_c: 1.0
      - __Ecoli_panGEMs__2agpg141_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG141tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG161tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg161_c: 1.0
      - __Ecoli_panGEMs__2agpg161_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG161tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG181tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg181_c: 1.0
      - __Ecoli_panGEMs__2agpg181_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG181tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPEAT140
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:0)
    - metabolites: !!omap
      - 2agpe140_c: -1.0
      - __Ecoli_panGEMs__pe140_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - ttdca_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPEAT140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPEAT120
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe120_c: -1.0
      - __Ecoli_panGEMs__pe120_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ddca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPEAT120
      - sbo: SBO:0000176
  - !!omap
    - id: DASYN160
    - name: CDP-diacylglycerol synthetase (n-C16:0)
    - metabolites: !!omap
      - cdpdhdecg_c: 1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - pa160_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00216
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: DASYN160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DASYN161
    - name: CDP-diacylglycerol synthetase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdhdec9eg_c: 1.0
      - __Ecoli_panGEMs__pa161_c: -1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00216
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DASYN161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DASYN181
    - name: CDP-diacylglycerol synthetase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodec11eg_c: 1.0
      - __Ecoli_panGEMs__pa181_c: -1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00216
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DASYN181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CDAPPA161
    - name: CDP-Diacylglycerol pyrophostatase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdhdec9eg_c: -1.0
      - __Ecoli_panGEMs__pa161_c: 1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CDAPPA161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPEAT161
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe161_c: -1.0
      - __Ecoli_panGEMs__pe161_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - hdcea_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPEAT161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPEAT141
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe141_c: -1.0
      - __Ecoli_panGEMs__pe141_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - ttdcea_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPEAT141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT160
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg160_c: -1.0
      - __Ecoli_panGEMs__pg160_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - hdca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGSA180
    - name: Phosphatidylglycerol synthase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodecg_c: -1.0
      - __Ecoli_panGEMs__pgp180_c: 1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA180
      - sbo: SBO:0000176
  - !!omap
    - id: PGCD
    - name: phosphoglycerate dehydrogenase
    - metabolites: !!omap
      - 3pg_c: -1.0
      - 3php_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03189
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: PGCD
      - rhea: RHEA:12641
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSSA140
    - name: Phosphatidylserine syntase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdecg_c: -1.0
      - __Ecoli_panGEMs__ps140_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT141
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg141_c: -1.0
      - __Ecoli_panGEMs__pg141_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - ttdcea_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT141
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE180
    - name: fatty-acid-CoA thioesterase (octadecanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ocdca_c: 1.0
      - stcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE180
      - rhea: RHEA:30139
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG140
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg140_c: -1.0
      - __Ecoli_panGEMs__apg140_c: 1.0
      - __Ecoli_panGEMs__pg140_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG141
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg141_c: -1.0
      - __Ecoli_panGEMs__apg141_c: 1.0
      - __Ecoli_panGEMs__pg141_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG160
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg160_c: -1.0
      - __Ecoli_panGEMs__apg160_c: 1.0
      - __Ecoli_panGEMs__pg160_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG180
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg180_c: -1.0
      - __Ecoli_panGEMs__apg180_c: 1.0
      - __Ecoli_panGEMs__pg180_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG161
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg161_c: -1.0
      - __Ecoli_panGEMs__apg161_c: 1.0
      - __Ecoli_panGEMs__pg161_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATG181
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoglycerol, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg181_c: -1.0
      - __Ecoli_panGEMs__apg181_c: 1.0
      - __Ecoli_panGEMs__pg181_c: -1.0
      - g3pg_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATG181
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE100
    - name: fatty-acid-CoA thioesterase (decanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - dca_c: 1.0
      - dcacoa_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE100
      - rhea: RHEA:40059
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE80
    - name: fatty-acid-CoA thioesterase (octanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - octa_c: 1.0
      - octcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE80
      - rhea: RHEA:30143
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE60
    - name: fatty-acid-CoA thioesterase (hexanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hxa_c: 1.0
      - hxcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE60
      - rhea: RHEA:40115
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS180pp
    - name: Cardiolipin synthase (periplasmic, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn180_p: 1.0
      - __Ecoli_panGEMs__pg180_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1E120pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C12:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe120_p: 1.0
      - __Ecoli_panGEMs__pe120_p: -1.0
      - ddca_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1E120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS181pp
    - name: Cardiolipin synthase (periplasmic, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn181_p: 1.0
      - __Ecoli_panGEMs__pg181_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS181pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_cys__L_e
    - name: Exchange of L-cysteine zwitterion.
    - metabolites: !!omap
      - cys__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cys__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PG161abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C16:1, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg161_c: -1.0
      - __Ecoli_panGEMs__pg161_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG161abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGP120abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C12:0, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp120_c: -1.0
      - __Ecoli_panGEMs__pgp120_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP120abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MALtex
    - name: Malate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - mal__L_e: -1.0
      - mal__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MALtex
      - sbo: SBO:0000655
  - !!omap
    - id: NO3tex
    - name: nitrate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - no3_e: -1.0
      - no3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: NO3tex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__3OAS141
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ocmrs7eACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__cddec5eACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR121
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcddec5eACP_c: 1.0
      - __Ecoli_panGEMs__3ocddec5eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR121
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CFAS160G
    - name: Cyclopropane fatty acid synthase (Phosphatidylglycerol, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpg160_c: 1.0
      - __Ecoli_panGEMs__pg161_c: -1.0
      - ahcys_c: 2.0
      - amet_c: -2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01796
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CFAS160G
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGP161abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C16:1, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp161_c: -1.0
      - __Ecoli_panGEMs__pgp161_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP161abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGP181abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C18:1, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp181_c: -1.0
      - __Ecoli_panGEMs__pgp181_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP181abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PA120abcpp
    - name: Phosphatidate transport via ABC system (n-C12:0, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pa120_c: -1.0
      - __Ecoli_panGEMs__pa120_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PA120abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G120pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C12:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg120_p: 1.0
      - __Ecoli_panGEMs__pg120_p: -1.0
      - ddca_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G120pp
      - sbo: SBO:0000176
  - !!omap
    - id: URAt2pp
    - name: uracil transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ura_c: 1.0
      - ura_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02710 or MNJNJBIH_01127
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: URAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAE141
    - name: fatty-acid-CoA thioesterase (tetradecenoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - tdecoa_c: -1.0
      - ttdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE141
      - rhea: RHEA:40135
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS120pp
    - name: Cardiolipin synthase (periplasmic, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn120_p: 1.0
      - __Ecoli_panGEMs__pg120_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ALPATE160pp
    - name: Apolipoprotein N-acyltransferase (phosphatidylethanolamine, 
        periplasm)
    - metabolites: !!omap
      - 2agpe160_p: 1.0
      - __Ecoli_panGEMs__alpp_p: -1.0
      - __Ecoli_panGEMs__lpp_p: 1.0
      - pe160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01812 and MNJNJBIH_00709
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ALPATE160pp
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE161
    - name: fatty-acid-CoA thioesterase (hexadecenoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdcea_c: 1.0
      - hdcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE161
      - rhea: RHEA:40131
      - sbo: SBO:0000176
  - !!omap
    - id: EX_gsn_e
    - name: Exchange of guanosine.
    - metabolites: !!omap
      - gsn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gsn_e
      - sbo: SBO:0000627
  - !!omap
    - id: TTDCEAtexi
    - name: Tetradecenoate transport via facilitated irreversible diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - ttdcea_e: -1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: TTDCEAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: HDCEAtexi
    - name: Hexadecenoate transport via facilitated irreversible diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - hdcea_e: -1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02550
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: HDCEAtexi
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ALPATG160pp
    - name: Apolipoprotein N-acyltransferase (phosphatidylglycerol, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg160_p: 1.0
      - __Ecoli_panGEMs__alpp_p: -1.0
      - __Ecoli_panGEMs__lpp_p: 1.0
      - __Ecoli_panGEMs__pg160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01812 and MNJNJBIH_00709
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ALPATG160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT120
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg120_c: -1.0
      - __Ecoli_panGEMs__pg120_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ddca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE120
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe120_c: -1.0
      - __Ecoli_panGEMs__apg120_c: 1.0
      - __Ecoli_panGEMs__pg120_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE120
      - sbo: SBO:0000176
  - !!omap
    - id: ALAALAD
    - name: D-alanine-D-alanine dipeptidase
    - metabolites: !!omap
      - ala__D_c: 2.0
      - alaala_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01636
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: ALAALAD
      - rhea: RHEA:20661
      - sbo: SBO:0000176
  - !!omap
    - id: 2AGPEAT180
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:0)
    - metabolites: !!omap
      - 2agpe180_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ocdca_c: -1.0
      - pe180_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: 2AGPEAT180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE140
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C14:0)
    - metabolites: !!omap
      - 2agpe140_c: -1.0
      - __Ecoli_panGEMs__apg140_c: 1.0
      - __Ecoli_panGEMs__pg140_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE140
      - sbo: SBO:0000176
  - !!omap
    - id: EX_orot_e
    - name: Exchange of orotate.
    - metabolites: !!omap
      - orot_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_orot_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE160
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C16:0)
    - metabolites: !!omap
      - 2agpe160_c: -1.0
      - __Ecoli_panGEMs__apg160_c: 1.0
      - __Ecoli_panGEMs__pg160_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE180
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C18:0)
    - metabolites: !!omap
      - 2agpe180_c: -1.0
      - __Ecoli_panGEMs__apg180_c: 1.0
      - __Ecoli_panGEMs__pg180_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE141
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe141_c: -1.0
      - __Ecoli_panGEMs__apg141_c: 1.0
      - __Ecoli_panGEMs__pg141_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPEAT181
    - name: 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe181_c: -1.0
      - __Ecoli_panGEMs__pe181_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ocdcea_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPEAT181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT140
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg140_c: -1.0
      - __Ecoli_panGEMs__pg140_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - ttdca_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1E181pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C18:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe181_p: 1.0
      - __Ecoli_panGEMs__pe181_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1E181pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G180pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C18:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg180_p: 1.0
      - __Ecoli_panGEMs__pg180_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE161
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe161_c: -1.0
      - __Ecoli_panGEMs__apg161_c: 1.0
      - __Ecoli_panGEMs__pg161_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2ATE181
    - name: Lysophospholipase L2 (acyltransferase, 
        2-acyl-glycerophosphoethanolamine, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe181_c: -1.0
      - __Ecoli_panGEMs__apg181_c: 1.0
      - __Ecoli_panGEMs__pg181_c: -1.0
      - g3pe_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2ATE181
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAL141t2pp
    - name: fatty-acid-CoA ligase (tetradecenoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - ppi_c: 1.0
      - tdecoa_c: 1.0
      - ttdcea_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01841 or MNJNJBIH_01952
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL141t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAL161t2pp
    - name: fatty-acid-CoA ligase (hexadecenoate transport via vectoral Co-A 
        coupling)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - h_p: -1.0
      - hdcea_p: -1.0
      - hdcoa_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01952 or MNJNJBIH_01841
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAL161t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: PA160abcpp
    - name: phosphatidate transport via ABC system (n-C16:0, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pa160_c: -1.0
      - pa160_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PA160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G181pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C18:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg181_p: 1.0
      - __Ecoli_panGEMs__pg181_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G181pp
      - sbo: SBO:0000176
  - !!omap
    - id: ALAALAabcpp
    - name: D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - alaala_c: 1.0
      - alaala_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01635 and MNJNJBIH_01634 and MNJNJBIH_01631 
        and MNJNJBIH_01633 and MNJNJBIH_01632
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALAALAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: HEXt2rpp
    - name: hexanoate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - hxa_c: 1.0
      - hxa_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02418
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: HEXt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: G3PEabcpp
    - name: sn-glycerol-3-phosphoethanolamine transport via ABC system 
        (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g3pe_c: 1.0
      - g3pe_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03820 and MNJNJBIH_03821 and MNJNJBIH_03823 
        and MNJNJBIH_03822
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: G3PEabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: G3PCabcpp
    - name: sn-glycerol-3-phosphocholine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g3pc_c: 1.0
      - g3pc_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03820 and MNJNJBIH_03821 and MNJNJBIH_03823 
        and MNJNJBIH_03822
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: G3PCabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPGAT161
    - name: 2-acyl-glycerophospho-glycerol acyltransferase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg161_c: -1.0
      - __Ecoli_panGEMs__pg161_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - hdcea_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03097
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPGAT161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PA181abcpp
    - name: Phosphatidate transport via ABC system (n-C18:1, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pa181_c: -1.0
      - __Ecoli_panGEMs__pa181_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PA181abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 12DGR141tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C14:1)
    - metabolites: !!omap
      - 12dgr141_c: 1.0
      - 12dgr141_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR141tipp
      - sbo: SBO:0000655
  - !!omap
    - id: AMPTASEPG
    - name: aminopeptidase (pro-gly)
    - metabolites: !!omap
      - gly_c: 1.0
      - h2o_c: -1.0
      - pro__L_c: 1.0
      - progly_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01040 or MNJNJBIH_04773 or MNJNJBIH_00286
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: AMPTASEPG
      - rhea: RHEA:28799
      - sbo: SBO:0000176
  - !!omap
    - id: ADSL1r
    - name: adenylsuccinate lyase
    - metabolites: !!omap
      - amp_c: 1.0
      - dcamp_c: -1.0
      - fum_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01273
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: ADSL1r
      - rhea: RHEA:16853
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP140pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg140_p: 1.0
      - __Ecoli_panGEMs__pgp140_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP140pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP141pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg141_p: 1.0
      - __Ecoli_panGEMs__pgp141_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP160pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg160_p: 1.0
      - __Ecoli_panGEMs__pgp160_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG140tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg140_c: 1.0
      - __Ecoli_panGEMs__2agpg140_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG140tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGPP180pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg180_p: 1.0
      - __Ecoli_panGEMs__pgp180_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG160tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg160_c: 1.0
      - __Ecoli_panGEMs__2agpg160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG160tipp
      - sbo: SBO:0000655
  - !!omap
    - id: SERD_D
    - name: D-serine deaminase
    - metabolites: !!omap
      - nh4_c: 1.0
      - pyr_c: 1.0
      - ser__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02557
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: SERD_D
      - rhea: RHEA:13977
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH141pp
    - name: Cardiolipin hydrolase (periplasm, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn141_p: -1.0
      - __Ecoli_panGEMs__pa141_p: 1.0
      - __Ecoli_panGEMs__pg141_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH160pp
    - name: Cardiolipin hydrolase (periplasm, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn160_p: -1.0
      - __Ecoli_panGEMs__pg160_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - pa160_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH161pp
    - name: Cardiolipin hydrolase (periplasm, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn161_p: -1.0
      - __Ecoli_panGEMs__pa161_p: 1.0
      - __Ecoli_panGEMs__pg161_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH181pp
    - name: Cardiolipin hydrolase (periplasm, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn181_p: -1.0
      - __Ecoli_panGEMs__pa181_p: 1.0
      - __Ecoli_panGEMs__pg181_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH181pp
      - sbo: SBO:0000176
  - !!omap
    - id: D_LACt2pp
    - name: D-lactate transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lac__D_c: 1.0
      - lac__D_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04011
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: D_LACt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: PLIPA1E180pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C18:0) (periplasm)
    - metabolites: !!omap
      - 2agpe180_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
      - pe180_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PLIPA1E180pp
      - sbo: SBO:0000176
  - !!omap
    - id: RIBtex
    - name: ribose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - rib__D_e: -1.0
      - rib__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: RIBtex
      - sbo: SBO:0000655
  - !!omap
    - id: FLVRx
    - name: flavin reductase (NAD)
    - metabolites: !!omap
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - rbflvrd_c: 1.0
      - ribflv_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04282
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: FLVRx:2
      - rhea: RHEA:31455
      - sbo: SBO:0000176
  - !!omap
    - id: THMtex
    - name: Thiamine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - thm_e: -1.0
      - thm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: THMtex
      - sbo: SBO:0000655
  - !!omap
    - id: XYLUtex
    - name: L-xylulose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - xylu__L_e: -1.0
      - xylu__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: XYLUtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G140pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C14:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg140_p: 1.0
      - __Ecoli_panGEMs__pg140_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G140pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G161pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C16:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg161_p: 1.0
      - __Ecoli_panGEMs__pg161_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS160pp
    - name: Cardiolipin synthase (periplasmic, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn160_p: 1.0
      - __Ecoli_panGEMs__pg160_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS161pp
    - name: Cardiolipin synthase (periplasmic, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn161_p: 1.0
      - __Ecoli_panGEMs__pg161_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS161pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_manglyc_e
    - name: Exchange of 2-(alpha-D-mannosyl)-D-glycerate.
    - metabolites: !!omap
      - manglyc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_manglyc_e
      - sbo: SBO:0000627
  - !!omap
    - id: ALLtex
    - name: Allose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - all__D_e: -1.0
      - all__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_00290 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ALLtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PG160abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C16:0, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg160_c: -1.0
      - __Ecoli_panGEMs__pg160_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: FRUpts2pp
    - name: Fructose transport via PEP:Pyr PTS (f6p generating) (periplasm)
    - metabolites: !!omap
      - f6p_c: 1.0
      - fru_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01966 and MNJNJBIH_01965 and MNJNJBIH_02618 
        and MNJNJBIH_01967 and MNJNJBIH_02617
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FRUpts2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGP140abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C14:0, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp140_c: -1.0
      - __Ecoli_panGEMs__pgp140_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP140abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PAPA120pp
    - name: Phosphatidate phosphatase (periplasmic, n-C12:0)
    - metabolites: !!omap
      - 12dgr120_p: 1.0
      - __Ecoli_panGEMs__pa120_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA120pp
      - sbo: SBO:0000176
  - !!omap
    - id: PAPA140pp
    - name: Phosphatidate phosphatase (periplasmic, n-C14:0)
    - metabolites: !!omap
      - 12dgr140_p: 1.0
      - h2o_p: -1.0
      - pa140_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PAPA140pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_metsox_R__L_e
    - name: Exchange of L-methionine (R)-S-oxide zwitterion.
    - metabolites: !!omap
      - metsox_R__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_metsox_R__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PAPA141pp
    - name: Phosphatidate phosphatase (periplasmic, n-C14:1)
    - metabolites: !!omap
      - 12dgr141_p: 1.0
      - __Ecoli_panGEMs__pa141_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA141pp
      - sbo: SBO:0000176
  - !!omap
    - id: 34dhpactex
    - name: dihydroxyphenylacetaldehyde transport via diffusion (extracellular 
        to periplasm)
    - metabolites: !!omap
      - 34dhpac_e: -1.0
      - 34dhpac_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 34dhpactex
      - sbo: SBO:0000655
  - !!omap
    - id: PAPA160pp
    - name: Phosphatidate phosphatase (periplasmic, n-C16:0)
    - metabolites: !!omap
      - 12dgr160_p: 1.0
      - h2o_p: -1.0
      - pa160_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PAPA160pp
      - rhea: RHEA:43236
      - sbo: SBO:0000176
  - !!omap
    - id: G6Pt6_2pp
    - name: Glucose-6-phosphate transport via phosphate antiport (periplasm)
    - metabolites: !!omap
      - g6p_c: 1.0
      - g6p_p: -1.0
      - pi_c: -2.0
      - pi_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04089
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: G6Pt6_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PAPA161pp
    - name: Phosphatidate phosphatase (periplasmic, n-C16:1)
    - metabolites: !!omap
      - 12dgr161_p: 1.0
      - __Ecoli_panGEMs__pa161_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MALTHXtexi
    - name: Maltohexaose transport via diffusion (extracellular to periplasm) 
        irreversible
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthx_e: -1.0
      - __Ecoli_panGEMs__malthx_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04520
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MALTHXtexi
      - sbo: SBO:0000655
  - !!omap
    - id: 12PPDStpp
    - name: (S)-Propane-1,2-diol facilitated transport (periplasm)
    - metabolites: !!omap
      - 12ppd__S_c: 1.0
      - 12ppd__S_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12PPDStpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PAPA180pp
    - name: Phosphatidate phosphatase (periplasmic, n-C18:0)
    - metabolites: !!omap
      - 12dgr180_p: 1.0
      - __Ecoli_panGEMs__pa180_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA180pp
      - sbo: SBO:0000176
  - !!omap
    - id: PROtex
    - name: L-proline transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - pro__L_e: -1.0
      - pro__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PROtex
      - sbo: SBO:0000655
  - !!omap
    - id: HPYRI
    - name: hydroxypyruvate isomerase
    - metabolites: !!omap
      - 2h3opp_c: 1.0
      - hpyr_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00562
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HPYRI
      - rhea: RHEA:11952
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXUtex
    - name: Fe(III)hydroxamate unloaded secretion
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_un_c: -1.0
      - __Ecoli_panGEMs__fe3hox_un_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXUtex
      - sbo: SBO:0000655
  - !!omap
    - id: HYD1pp
    - name: 'hydrogenase (ubiquinone-8: 2 protons) (periplasm)'
    - metabolites: !!omap
      - h2_c: -1.0
      - h_c: -2.0
      - h_p: 2.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03306 and MNJNJBIH_03310 and MNJNJBIH_03309 
        and MNJNJBIH_03308
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: HYD1pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cl_e
    - name: Chloride exchange
    - metabolites: !!omap
      - cl_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cl_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__FE3DHBZStonex
    - name: Ferric 2,3-dihydroxybenzoylserine transport via ton system 
        (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dhbzs_e: -1.0
      - __Ecoli_panGEMs__fe3dhbzs_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ((MNJNJBIH_01392 and MNJNJBIH_03319 and 
        MNJNJBIH_03320) and MNJNJBIH_00884) or ((MNJNJBIH_01392 and 
        MNJNJBIH_03319 and MNJNJBIH_03320) and MNJNJBIH_02343)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3DHBZStonex
      - sbo: SBO:0000655
  - !!omap
    - id: AACTOOR
    - name: Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing)
    - metabolites: !!omap
      - aact_c: -1.0
      - h2o2_c: 1.0
      - h2o_c: -1.0
      - mthgxl_c: 1.0
      - nh4_c: 1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: AACTOOR
      - rhea: RHEA:28186
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__23DAPPAtex
    - name: 2,3-diaminopropionate transport via diffusion
    - metabolites: !!omap
      - __Ecoli_panGEMs__23dappa_e: -1.0
      - __Ecoli_panGEMs__23dappa_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__23DAPPAtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ECAP3pp
    - name: Enterobacterial common antigen polymerase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__eca3und_p: -1.0
      - __Ecoli_panGEMs__eca4und_p: 1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
      - unagamuf_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04214 and MNJNJBIH_04223
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ECAP3pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMtonex
    - name: Ferroxamine transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_e: -1.0
      - __Ecoli_panGEMs__feoxam_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00188 and (MNJNJBIH_01392 and MNJNJBIH_03319 
        and MNJNJBIH_03320)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMtonex
      - sbo: SBO:0000655
  - !!omap
    - id: TPRDCOAS
    - name: triphosphoribosyl-dephospho-CoA synthase
    - metabolites: !!omap
      - 2tpr3dpcoa_c: 1.0
      - ade_c: 1.0
      - atp_c: -1.0
      - dpcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00665
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: TPRDCOAS
      - rhea: RHEA:15117
      - sbo: SBO:0000176
  - !!omap
    - id: ACGAM1PPpp
    - name: N-acetyl-D-glucosamine 1-phosphatase (periplasm)
    - metabolites: !!omap
      - acgam1p_p: -1.0
      - acgam_p: 1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ACGAM1PPpp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dgmp_e
    - name: Exchange of 2'-deoxyguanosine 5'-monophosphate(2-).
    - metabolites: !!omap
      - dgmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dgmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: GAMptspp
    - name: D-glucosamine transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - gam6p_c: 1.0
      - gam_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02617 and MNJNJBIH_02618 and MNJNJBIH_01967 
        and MNJNJBIH_01965 and MNJNJBIH_01966
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GAMptspp
      - sbo: SBO:0000655
  - !!omap
    - id: GSNt2pp
    - name: guanosine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - gsn_c: 1.0
      - gsn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03243
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GSNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_4hoxpacd_e
    - name: Exchange of (4-hydroxyphenyl)acetaldehyde.
    - metabolites: !!omap
      - 4hoxpacd_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_4hoxpacd_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__FMNRx
    - name: FMN reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: -1.0
      - fmnh2_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01048 or MNJNJBIH_04282
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FMNRx
      - sbo: SBO:0000176
  - !!omap
    - id: EX_3hpppn_e
    - name: Exchange of 3-(3-hydroxyphenyl)propanoate.
    - metabolites: !!omap
      - 3hpppn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3hpppn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_man6p_e
    - name: Exchange of alpha-D-mannose 6-phosphate(2-).
    - metabolites: !!omap
      - man6p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_man6p_e
      - sbo: SBO:0000627
  - !!omap
    - id: GSNtex
    - name: guanosine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gsn_e: -1.0
      - gsn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GSNtex
      - sbo: SBO:0000655
  - !!omap
    - id: SBTtex
    - name: D-sorbitol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - sbt__D_e: -1.0
      - sbt__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SBTtex
      - sbo: SBO:0000655
  - !!omap
    - id: FORtex
    - name: formate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - for_e: -1.0
      - for_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: FORtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__tsul_e
    - name: Thiosulfate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__tsul_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__tsul_e
      - sbo: SBO:0000627
  - !!omap
    - id: PHEt2rpp
    - name: L-phenylalanine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - phe__L_c: 1.0
      - phe__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00610 or MNJNJBIH_00143
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PHEt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: DHBS
    - name: 2,3-dihydroxybenzoate adenylate synthase
    - metabolites: !!omap
      - 23dhb_c: -1.0
      - 23dhba_c: 1.0
      - atp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00639
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHBS
      - rhea: RHEA:20229
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__THIORDXi
    - name: Hydrogen peroxide reductase (thioredoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
      - h2o2_c: -1.0
      - h2o_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04210 and MNJNJBIH_02690) or MNJNJBIH_01850 
        or (MNJNJBIH_02826 and MNJNJBIH_02690)
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__THIORDXi
      - sbo: SBO:0000176
  - !!omap
    - id: EX_n2o_e
    - name: Exchange of dinitrogen oxide.
    - metabolites: !!omap
      - n2o_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_n2o_e
      - sbo: SBO:0000627
  - !!omap
    - id: PPPGO3
    - name: protoporphyrinogen oxidase (anaerobic)
    - metabolites: !!omap
      - fum_c: -3.0
      - ppp9_c: 1.0
      - pppg9_c: -1.0
      - succ_c: 3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04289
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PPPGO3
      - sbo: SBO:0000176
  - !!omap
    - id: PFK
    - name: phosphofructokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - f6p_c: -1.0
      - fdp_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04368 or MNJNJBIH_01864
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PFK
      - rhea: RHEA:16109
      - sbo: SBO:0000176
  - !!omap
    - id: PDX5POi
    - name: pyridoxine 5'-phosphate oxidase
    - metabolites: !!omap
      - h2o2_c: 1.0
      - o2_c: -1.0
      - pdx5p_c: -1.0
      - pydx5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01769
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PDX5POi
      - rhea: RHEA:15149
      - sbo: SBO:0000176
  - !!omap
    - id: PDX5PO2
    - name: pyridoxine 5'-phosphate oxidase (anaerboic
    - metabolites: !!omap
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pdx5p_c: -1.0
      - pydx5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PDX5PO2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MDDCP1pp
    - name: Murein D,D-carboxypeptidase (murein5px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4px4p_p: 1.0
      - __Ecoli_panGEMs__murein5px4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00684 or MNJNJBIH_03525 or MNJNJBIH_00931 or 
        MNJNJBIH_05551 or MNJNJBIH_00415 or MNJNJBIH_02634
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDCP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: GUI2
    - name: glucuronate isomerase (D-galacturonate)
    - metabolites: !!omap
      - galur_c: -1.0
      - tagur_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03422
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GUI2
      - rhea: RHEA:27702
      - sbo: SBO:0000176
  - !!omap
    - id: OMBZLM
    - name: 2-Octaprenyl-6-methoxy-benzoquinol methylase
    - metabolites: !!omap
      - 2ombzl_c: -1.0
      - 2ommbl_c: 1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04272
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OMBZLM
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A181pp
    - name: Phospholipase A1 (phosphatidate, n-C18:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2odec11eg3p_p: 1.0
      - __Ecoli_panGEMs__pa181_p: -1.0
      - h2o_p: -1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A181pp
      - sbo: SBO:0000176
  - !!omap
    - id: PGM
    - name: phosphoglycerate mutase
    - metabolites: !!omap
      - 2pg_c: -1.0
      - 3pg_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00824 or MNJNJBIH_04022
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: PGM
      - rhea: RHEA:15901
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A141
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2tdec7eg3p_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ttdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A141
      - sbo: SBO:0000176
  - !!omap
    - id: HG2t3pp
    - name: mercury (Hg+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - hg2_c: -1.0
      - hg2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04366
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: HG2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTBO3_4pp
    - name: 'cytochrome oxidase bo3 (ubiquinol-8: 4 protons) (periplasm)'
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -4.0
      - h_p: 4.0
      - o2_c: -0.5
      - q8_c: 1.0
      - q8h2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00474 and MNJNJBIH_00473 and MNJNJBIH_00471 
        and MNJNJBIH_00472
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CYTBO3_4pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__maltttr_e
    - name: Maltotetraose exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__maltttr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__maltttr_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MLTG5
    - name: Maltodextrin glucosidase (maltoheptaose)
    - metabolites: !!omap
      - __Ecoli_panGEMs__malthp_c: -1.0
      - __Ecoli_panGEMs__malthx_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00445
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTG5
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR141x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__t3c7mrseACP_c: -1.0
      - __Ecoli_panGEMs__tdeACP_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR141x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR181x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__octeACP_c: 1.0
      - __Ecoli_panGEMs__t3c11vaceACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR181x
      - sbo: SBO:0000176
  - !!omap
    - id: TPI
    - name: triose-phosphate isomerase
    - metabolites: !!omap
      - dhap_c: -1.0
      - g3p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04371
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: TPI
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR181y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__octeACP_c: 1.0
      - __Ecoli_panGEMs__t3c11vaceACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR181y
      - sbo: SBO:0000176
  - !!omap
    - id: 2DOXG6PP
    - name: 2-deoxyglucose-6-phosphatase
    - metabolites: !!omap
      - 2dglc_c: 1.0
      - 2doxg6p_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04264 or MNJNJBIH_01868 or MNJNJBIH_00491
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2DOXG6PP
      - rhea: RHEA:22236
      - sbo: SBO:0000176
  - !!omap
    - id: OXAMTC
    - name: oxamate transcarbamoylase
    - metabolites: !!omap
      - cbp_c: 1.0
      - oxam_c: 1.0
      - oxur_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: OXAMTC
      - rhea: RHEA:22984
      - sbo: SBO:0000176
  - !!omap
    - id: UDCPPtppi
    - name: undecaprenyl phosphate transport (cytoplasm to periplasm)
    - metabolites: !!omap
      - udcpp_c: 1.0
      - udcpp_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: UDCPPtppi
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AGMH
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl beta 
        -1,4-N-acetylglucosaminidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm_c: -1.0
      - acgam_c: 1.0
      - anhm_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01244
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGMH
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DASYN140
    - name: CDP-diacylglycerol synthetase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdecg_c: 1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - pa140_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00216
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DASYN140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MPTG
    - name: Murein polymerizing transglycosylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p5p_p: 1.0
      - h_c: 2.0
      - uaagmda_c: -2.0
      - udcpdp_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01203 and MNJNJBIH_00119 and MNJNJBIH_03553)
        or (MNJNJBIH_03756 and MNJNJBIH_01203 and MNJNJBIH_00119) or 
        (MNJNJBIH_00187 and MNJNJBIH_01203 and MNJNJBIH_00119)
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MPTG
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DASYN180
    - name: CDP-diacylglycerol synthetase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodecg_c: 1.0
      - __Ecoli_panGEMs__pa180_c: -1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00216
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DASYN180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MPTG2
    - name: Murein polymerizing transglycosylase 2 (three linked units)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p5p5p_p: 1.0
      - __Ecoli_panGEMs__murein5p5p_p: -1.0
      - h_c: 1.0
      - uaagmda_c: -1.0
      - udcpdp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00187 and MNJNJBIH_01203 and MNJNJBIH_00119)
        or (MNJNJBIH_01203 and MNJNJBIH_00119 and MNJNJBIH_03553) or 
        (MNJNJBIH_03756 and MNJNJBIH_01203 and MNJNJBIH_00119)
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MPTG2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DASYN141
    - name: CDP-diacylglycerol synthetase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdec7eg_c: 1.0
      - __Ecoli_panGEMs__pa141_c: -1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00216
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DASYN141
      - sbo: SBO:0000176
  - !!omap
    - id: RPI
    - name: ribose-5-phosphate isomerase
    - metabolites: !!omap
      - r5p_c: -1.0
      - ru5p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03190
    - subsystem: Pentose Phosphate Pathway
    - annotation: !!omap
      - biggr: RPI
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MCTP1App
    - name: Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p5p_p: -1.0
      - __Ecoli_panGEMs__murein5px4p_p: 1.0
      - ala__D_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00688 and MNJNJBIH_00114 and MNJNJBIH_03756)
        or (MNJNJBIH_00688 and MNJNJBIH_00114 and MNJNJBIH_00187)
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MCTP1App
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MCTP2App
    - name: Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p5p5p_p: -1.0
      - __Ecoli_panGEMs__murein5px4px4p_p: 1.0
      - ala__D_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00688 and MNJNJBIH_00114 and MNJNJBIH_03756)
        or (MNJNJBIH_00688 and MNJNJBIH_00114 and MNJNJBIH_00187)
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MCTP2App
      - sbo: SBO:0000176
  - !!omap
    - id: CDAPPA160
    - name: CDP-Diacylglycerol pyrophostatase (n-C16:0)
    - metabolites: !!omap
      - cdpdhdecg_c: -1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pa160_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: CDAPPA160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CDAPPA141
    - name: CDP-Diacylglycerol pyrophostatase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdec7eg_c: -1.0
      - __Ecoli_panGEMs__pa141_c: 1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CDAPPA141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MCTP1Bpp
    - name: Murein crosslinking transpeptidase 1B:(A2pm->A2pm) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p5p_p: -1.0
      - __Ecoli_panGEMs__murein5px3p_p: 1.0
      - alaala_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01813 or MNJNJBIH_01031
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MCTP1Bpp
      - sbo: SBO:0000176
  - !!omap
    - id: PERD
    - name: Erythronate 4-phosphate (4per) dehydrogenase
    - metabolites: !!omap
      - 4per_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - ohpb_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02522
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: PERD
      - rhea: RHEA:18829
      - sbo: SBO:0000176
  - !!omap
    - id: MELIBt3ipp
    - name: melibiose transport in via antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - melib_c: -1.0
      - melib_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01682
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MELIBt3ipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGSA141
    - name: Phosphatidylglycerol synthase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdec7eg_c: -1.0
      - __Ecoli_panGEMs__pgp141_c: 1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA141
      - sbo: SBO:0000176
  - !!omap
    - id: EX_alaala_e
    - name: Exchange of D-alanyl-D-alanine zwitterion.
    - metabolites: !!omap
      - alaala_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_alaala_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_dtmp_e
    - name: Exchange of dTMP(2-).
    - metabolites: !!omap
      - dtmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dtmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: 5DOAN
    - name: 5'-deoxyadenosine nuclosidase
    - metabolites: !!omap
      - 5drib_c: 1.0
      - ade_c: 1.0
      - dad_5_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00199
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: 5DOAN
      - sbo: SBO:0000176
  - !!omap
    - id: EX_5drib_c
    - name: Sink needed to allow 5'-deoxyribose to leave system
    - metabolites: !!omap
      - 5drib_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular demand
    - annotation: !!omap
      - biggr: EX_5drib_c
      - sbo: SBO:0000627
  - !!omap
    - id: EX_lipoate_e
    - name: Lipoate exchange
    - metabolites: !!omap
      - lipoate_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lipoate_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pydx_e
    - name: Exchange of pyridoxal.
    - metabolites: !!omap
      - pydx_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pydx_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_g1p_e
    - name: Exchange of D-glucopyranose 1-phosphate(2-).
    - metabolites: !!omap
      - g1p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_g1p_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLCtex:2
    - name: glucose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - glc__D_e: -1.0
      - glc__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GLCtex
      - sbo: SBO:0000655
  - !!omap
    - id: NAt3pp
    - name: sodium transport out via proton antiport (cytoplasm to periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - na1_c: -1.0
      - na1_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00934 or MNJNJBIH_01352
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NAt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: MINOHPtexi
    - name: myo-inositol phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - minohp_e: -1.0
      - minohp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: MINOHPtexi
      - sbo: SBO:0000655
  - !!omap
    - id: 12PPDRtpp
    - name: (R)-Propane-1,2-diol facilitated transport (periplasm)
    - metabolites: !!omap
      - 12ppd__R_c: 1.0
      - 12ppd__R_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12PPDRtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SFGTHi
    - name: S-Formylglutathione hydralase
    - metabolites: !!omap
      - Sfglutth_c: -1.0
      - for_c: 1.0
      - gthrd_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02342 or MNJNJBIH_00398
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: SFGTHi
      - rhea: RHEA:14961
      - sbo: SBO:0000176
  - !!omap
    - id: ATPX5P
    - name: pyridoxamine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pyam5p_c: 1.0
      - pydam_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02620
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ATPX5P
      - rhea: RHEA:25104
      - sbo: SBO:0000176
  - !!omap
    - id: DHORDfum
    - name: Fumarate dependent DHORD
    - metabolites: !!omap
      - dhor__S_c: -1.0
      - fum_c: -1.0
      - orot_c: 1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: DHORDfum
      - rhea: RHEA:30059
      - sbo: SBO:0000176
  - !!omap
    - id: K2L4Aabcpp
    - name: KDO(2)-lipid IV A transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - kdo2lipid4_c: -1.0
      - kdo2lipid4_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: K2L4Aabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: FACOAE120
    - name: fatty-acid-CoA thioesterase (dodecanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - ddca_c: 1.0
      - ddcacoa_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00500
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: FACOAE120
      - rhea: RHEA:30135
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR120
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hddecACP_c: 1.0
      - __Ecoli_panGEMs__3oddecACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD80
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hoctACP_c: -1.0
      - __Ecoli_panGEMs__toct2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD80
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD120
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hddecACP_c: -1.0
      - __Ecoli_panGEMs__tddec2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00221 or MNJNJBIH_01066
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DSBCGT
    - name: DsbC:glutathione thiotransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbcox_p: -1.0
      - __Ecoli_panGEMs__dsbcrd_p: 1.0
      - gthox_p: 1.0
      - gthrd_p: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03168
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DSBCGT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DSBGGT
    - name: DsbG:glutathione thiotransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbgox_p: -1.0
      - __Ecoli_panGEMs__dsbgrd_p: 1.0
      - gthox_p: 1.0
      - gthrd_p: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00656
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DSBGGT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR180x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ocdcaACP_c: 1.0
      - __Ecoli_panGEMs__toctd2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR180x
      - sbo: SBO:0000176
  - !!omap
    - id: AKGtex
    - name: alpha-ketoglutarate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - akg_e: -1.0
      - akg_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: AKGtex
      - sbo: SBO:0000655
  - !!omap
    - id: SO4t2pp
    - name: sulfate transport in via proton symport (periplasm to cytoplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - so4_c: 1.0
      - so4_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02615
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SO4t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__EAR180y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ocdcaACP_c: 1.0
      - __Ecoli_panGEMs__toctd2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR180y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT120
    - name: 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C12:0)
    - metabolites: !!omap
      - 1ddecg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ddcaACP_c: -1.0
      - __Ecoli_panGEMs__pa120_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT120
      - sbo: SBO:0000176
  - !!omap
    - id: DHNAOT4
    - name: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
    - metabolites: !!omap
      - 2dmmql8_c: 1.0
      - co2_c: 1.0
      - dhna_c: -1.0
      - h_c: -1.0
      - octdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04385
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHNAOT4
      - rhea: RHEA:30099
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AMPMS2
    - name: 4-amino-2-methyl-5-phosphomethylpyrimidine synthetase
    - metabolites: !!omap
      - 4ampm_c: 1.0
      - __Ecoli_panGEMs__air_c: -1.0
      - for_c: 2.0
      - h2o_c: -1.0
      - h_c: 3.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04464
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AMPMS2
      - sbo: SBO:0000176
  - !!omap
    - id: EX_oxam_c
    - name: Exchange of oxamate.
    - metabolites: !!omap
      - oxam_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular demand
    - annotation: !!omap
      - biggr: EX_oxam_c
      - sbo: SBO:0000627
  - !!omap
    - id: ALR4x
    - name: aldose reductase (acetol)
    - metabolites: !!omap
      - 12ppd__R_c: 1.0
      - acetol_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05169
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: ALR4x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP120
    - name: Phosphatidylglycerol phosphate phosphatase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg120_c: 1.0
      - __Ecoli_panGEMs__pgp120_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DAGK120
    - name: Diacylglycerol kinase (n-C12:0)
    - metabolites: !!omap
      - 12dgr120_c: -1.0
      - __Ecoli_panGEMs__pa120_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAGK120
      - sbo: SBO:0000176
  - !!omap
    - id: ALLTNtex
    - name: allantoin transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - alltn_e: -1.0
      - alltn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ALLTNtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PSSA180
    - name: Phosphatidylserine syntase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodecg_c: -1.0
      - __Ecoli_panGEMs__ps180_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA180
      - sbo: SBO:0000176
  - !!omap
    - id: ASNtex
    - name: L-asparagine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - asn__L_e: -1.0
      - asn__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ASNtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PSSA161
    - name: Phosphatidylserine syntase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdhdec9eg_c: -1.0
      - __Ecoli_panGEMs__ps161_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSSA141
    - name: Phosphatidylserine syntase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdec7eg_c: -1.0
      - __Ecoli_panGEMs__ps141_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSD160
    - name: Phosphatidylserine decarboxylase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ps160_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pe160_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSD161
    - name: Phosphatidylserine decarboxylase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe161_c: 1.0
      - __Ecoli_panGEMs__ps161_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSD180
    - name: Phosphatidylserine decarboxylase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ps180_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pe180_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__COLIPAabcpp
    - name: Core oligosaccharide lipid A transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_c: -1.0
      - __Ecoli_panGEMs__colipa_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__COLIPAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1G141pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg141_p: -1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1G141pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1G180pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:0) 
        (periplasm)
    - metabolites: !!omap
      - 1agpg180_p: -1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1G180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1G181pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg181_p: -1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1G181pp
      - sbo: SBO:0000176
  - !!omap
    - id: ACONTb
    - name: aconitase (half-reaction B, Isocitrate hydro-lyase)
    - metabolites: !!omap
      - acon_c: -1.0
      - h2o_c: -1.0
      - icit_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00153 or MNJNJBIH_01429
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: ACONTb
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLCP2
    - name: Glycogen phosphorylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__bglycogen_c: -1.0
      - g1p_c: 1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03779 or MNJNJBIH_03792
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLCP2
      - sbo: SBO:0000176
  - !!omap
    - id: F6Pt6_2pp
    - name: Fructose-6-phosphate transport via phosphate antiport (periplasm)
    - metabolites: !!omap
      - f6p_c: 1.0
      - f6p_p: -1.0
      - pi_c: -2.0
      - pi_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04089
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: F6Pt6_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: PPALtpp
    - name: propanal transport via channel (periplasm)
    - metabolites: !!omap
      - ppal_c: -1.0
      - ppal_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PPALtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2A140pp
    - name: Phospholipase A2 (phosphatidate, n-C14:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdecg3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - pa140_p: -1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2A140pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2A141pp
    - name: Phospholipase A2 (phosphatidate, n-C14:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdec7eg3p_p: 1.0
      - __Ecoli_panGEMs__pa141_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2A141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2A180pp
    - name: Phospholipase A2 (phosphatidate, n-C18:0) (periplasm)
    - metabolites: !!omap
      - 1odecg3p_p: 1.0
      - __Ecoli_panGEMs__pa180_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2A180pp
      - sbo: SBO:0000176
  - !!omap
    - id: GAM6Pt6_2pp
    - name: D-Glucosamine 6-phosphate transport via phosphate antiport 
        (periplasm)
    - metabolites: !!omap
      - gam6p_c: 1.0
      - gam6p_p: -1.0
      - pi_c: -2.0
      - pi_p: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04089
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GAM6Pt6_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2E141pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C14:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpe141_p: 1.0
      - __Ecoli_panGEMs__pe141_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2E141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXabcpp
    - name: Ferric-dicitrate transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_c: 1.0
      - __Ecoli_panGEMs__fe3hox_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00189 and MNJNJBIH_00190 and MNJNJBIH_00191
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2E181pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C18:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpe181_p: 1.0
      - __Ecoli_panGEMs__pe181_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2E181pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G140pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C14:0) (periplasm)
    - metabolites: !!omap
      - 1tdecg3p_p: 1.0
      - __Ecoli_panGEMs__pg140_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G140pp
      - sbo: SBO:0000176
  - !!omap
    - id: PPALtex
    - name: propanal transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ppal_e: -1.0
      - ppal_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PPALtex
      - sbo: SBO:0000655
  - !!omap
    - id: CA2tex
    - name: calcium (Ca+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ca2_e: -1.0
      - ca2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CA2tex
      - sbo: SBO:0000655
  - !!omap
    - id: CUtex
    - name: copper (Cu+1) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cu_e: -1.0
      - cu_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CUtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__3HAD161
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcpalm9eACP_c: -1.0
      - __Ecoli_panGEMs__t3c9palmeACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G160pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C16:0) (periplasm)
    - metabolites: !!omap
      - 1agpg160_p: 1.0
      - __Ecoli_panGEMs__pg160_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G160pp
      - sbo: SBO:0000176
  - !!omap
    - id: CU1Opp
    - name: Cuprous Oxidase (Cu+1)
    - metabolites: !!omap
      - cu2_p: 4.0
      - cu_p: -4.0
      - h2o_p: 2.0
      - h_p: -4.0
      - o2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00159
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CU1Opp
      - rhea: RHEA:30083
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G181pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C18:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg181_p: 1.0
      - __Ecoli_panGEMs__pg181_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G181pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1E141pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpe141_p: -1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1E141pp
      - sbo: SBO:0000176
  - !!omap
    - id: LALDO2x
    - name: D-Lactaldehyde:NAD+ 1-oxidoreductase
    - metabolites: !!omap
      - h_c: -1.0
      - lald__D_c: 1.0
      - mthgxl_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05169
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: LALDO2x
      - rhea: RHEA:24528
      - sbo: SBO:0000176
  - !!omap
    - id: 12PPDRtex
    - name: (R)-Propane-1,2-diol transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 12ppd__R_e: -1.0
      - 12ppd__R_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 12PPDRtex
      - sbo: SBO:0000655
  - !!omap
    - id: LPLIPAL1E160pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:0) 
        (periplasm)
    - metabolites: !!omap
      - 1agpe160_p: -1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1E160pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1E180pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:0) 
        (periplasm)
    - metabolites: !!omap
      - 1agpe180_p: -1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1E180pp
      - sbo: SBO:0000176
  - !!omap
    - id: ASNS1
    - name: asparagine synthase (glutamine-hydrolysing)
    - metabolites: !!omap
      - amp_c: 1.0
      - asn__L_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00724
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ASNS1
      - rhea: RHEA:12228
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR80y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ocACP_c: 1.0
      - __Ecoli_panGEMs__toct2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR80y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR120y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ddcaACP_c: 1.0
      - __Ecoli_panGEMs__tddec2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR120y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR181
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcvac11eACP_c: 1.0
      - __Ecoli_panGEMs__3ocvac11eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD121
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcddec5eACP_c: -1.0
      - __Ecoli_panGEMs__t3c5ddeceACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD121
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR121y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cddec5eACP_c: 1.0
      - __Ecoli_panGEMs__t3c5ddeceACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR121y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1E181pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpe181_p: -1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1E181pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1G160pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:0) 
        (periplasm)
    - metabolites: !!omap
      - 1agpg160_p: -1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1G160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1G161pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg161_p: -1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1G161pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_o2_e
    - name: Exchange of dioxygen.
    - metabolites: !!omap
      - o2_e: -1.0
    - lower_bound: -20.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_o2_e
      - sbo: SBO:0000627
  - !!omap
    - id: PROGLYtex
    - name: L-Prolinylglycine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - progly_e: -1.0
      - progly_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PROGLYtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_progly_e
    - name: Exchange of L-prolinylglycine zwitterion.
    - metabolites: !!omap
      - progly_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_progly_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MDDCP2pp
    - name: Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4px4px4p_p: 1.0
      - __Ecoli_panGEMs__murein5px4px4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00684 or MNJNJBIH_03525 or MNJNJBIH_00931 or 
        MNJNJBIH_05551 or MNJNJBIH_02634 or MNJNJBIH_00415
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDCP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1G120pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C12:0) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg120_p: -1.0
      - ddca_p: 1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1G120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2E140pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C14:0) (periplasm)
    - metabolites: !!omap
      - 1agpe140_p: 1.0
      - __Ecoli_panGEMs__pe140_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2E140pp
      - sbo: SBO:0000176
  - !!omap
    - id: PLIPA2E160pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C16:0) (periplasm)
    - metabolites: !!omap
      - 1agpe160_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
      - pe160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PLIPA2E160pp
      - rhea: RHEA:62100
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2A161pp
    - name: Phospholipase A2 (phosphatidate, n-C16:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1hdec9eg3p_p: 1.0
      - __Ecoli_panGEMs__pa161_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2A161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2A181pp
    - name: Phospholipase A2 (phosphatidate, n-C18:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1odec11eg3p_p: 1.0
      - __Ecoli_panGEMs__pa181_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2A181pp
      - sbo: SBO:0000176
  - !!omap
    - id: F6Ptex
    - name: fructose 6-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - f6p_e: -1.0
      - f6p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: F6Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MDDCP3pp
    - name: Murein D,D-carboxypeptidase (murein5p5p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p4p_p: 1.0
      - __Ecoli_panGEMs__murein5p5p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00684 or MNJNJBIH_03525 or MNJNJBIH_00931 or 
        MNJNJBIH_05551 or MNJNJBIH_02634 or MNJNJBIH_00415
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDCP3pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR140x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__myrsACP_c: 1.0
      - __Ecoli_panGEMs__tmrs2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR140x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR40y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__but2eACP_c: -1.0
      - __Ecoli_panGEMs__butACP_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR40y
      - sbo: SBO:0000176
  - !!omap
    - id: GAMAN6Ptex
    - name: D-glucosamine 6-phosphate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - gam6p_e: -1.0
      - gam6p_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GAMAN6Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_gal_bD_e
    - name: Exchange of beta-D-galactose.
    - metabolites: !!omap
      - gal_bD_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gal_bD_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__3OAS181
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ocvac11eACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdeACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01232
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR161y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hdeACP_c: 1.0
      - __Ecoli_panGEMs__t3c9palmeACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR161y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT160
    - name: 1-hexadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:0)
    - metabolites: !!omap
      - 1hdecg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__palmACP_c: -1.0
      - pa160_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT140
    - name: 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdecg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
      - pa140_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGSA160
    - name: Phosphatidylglycerol synthase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp160_c: 1.0
      - cdpdhdecg_c: -1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDCP2Bpp
    - name: Murein L,D-carboxypeptidase (murein4p3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein3p3p_p: 1.0
      - __Ecoli_panGEMs__murein4p3p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01251 or MNJNJBIH_00902 or MNJNJBIH_02174 or 
        MNJNJBIH_01813 or MNJNJBIH_01031
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDCP2Bpp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS140
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3omrsACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ddcaACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527 or MNJNJBIH_01232
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR140
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hmrsACP_c: 1.0
      - __Ecoli_panGEMs__3omrsACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CDAPPA140
    - name: CDP-Diacylglycerol pyrophostatase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdecg_c: -1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pa140_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CDAPPA140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDCP1App
    - name: Murein L,D-carboxypeptidase (murein5px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein3px4p_p: 1.0
      - __Ecoli_panGEMs__murein5px4p_p: -1.0
      - alaala_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01031 or MNJNJBIH_02174 or MNJNJBIH_01251 or 
        MNJNJBIH_01813 or MNJNJBIH_00902
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDCP1App
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR160y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__palmACP_c: 1.0
      - __Ecoli_panGEMs__tpalm2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR160y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR160
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hpalmACP_c: 1.0
      - __Ecoli_panGEMs__3opalmACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR160
      - sbo: SBO:0000176
  - !!omap
    - id: PDE4
    - name: 3',5'-cyclic-nucleotide phosphodiesterase
    - metabolites: !!omap
      - 35cgmp_c: -1.0
      - gmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01637
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PDE4
      - rhea: RHEA:16957
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGSA161
    - name: Phosphatidylglycerol synthase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdhdec9eg_c: -1.0
      - __Ecoli_panGEMs__pgp161_c: 1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD181
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcvac11eACP_c: -1.0
      - __Ecoli_panGEMs__t3c11vaceACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP160
    - name: Phosphatidylglycerol phosphate phosphatase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg160_c: 1.0
      - __Ecoli_panGEMs__pgp160_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR100y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dcaACP_c: 1.0
      - __Ecoli_panGEMs__tdec2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR100y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR141
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcmrs7eACP_c: 1.0
      - __Ecoli_panGEMs__3ocmrs7eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR161
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcpalm9eACP_c: 1.0
      - __Ecoli_panGEMs__3ocpalm9eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD141
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hcmrs7eACP_c: -1.0
      - __Ecoli_panGEMs__t3c7mrseACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR121x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cddec5eACP_c: 1.0
      - __Ecoli_panGEMs__t3c5ddeceACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR121x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP180
    - name: Phosphatidylglycerol phosphate phosphatase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg180_c: 1.0
      - __Ecoli_panGEMs__pgp180_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP161
    - name: Phosphatidylglycerol phosphate phosphatase (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg161_c: 1.0
      - __Ecoli_panGEMs__pgp161_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP181
    - name: Phosphatidylglycerol phosphate phosphatase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg181_c: 1.0
      - __Ecoli_panGEMs__pgp181_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431 or MNJNJBIH_00460
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSD140
    - name: Phosphatidylserine decarboxylase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe140_c: 1.0
      - __Ecoli_panGEMs__ps140_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD140
      - sbo: SBO:0000176
  - !!omap
    - id: MICITDr
    - name: 2-methylisocitrate dehydratase
    - metabolites: !!omap
      - 2mcacn_c: -1.0
      - h2o_c: -1.0
      - micit_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00153
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MICITDr
      - rhea: RHEA:17941
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CDAPPA180
    - name: CDP-Diacylglycerol pyrophostatase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodecg_c: -1.0
      - __Ecoli_panGEMs__pa180_c: 1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CDAPPA180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGM4PH
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide beta 
        -1,4-N-acetylglucosaminidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm4p_c: -1.0
      - __Ecoli_panGEMs__anhm4p_c: 1.0
      - acgam_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01244
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGM4PH
      - sbo: SBO:0000176
  - !!omap
    - id: NTP12
    - name: nucleoside-triphosphatase (XTP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - xdp_c: 1.0
      - xtp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00003
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTP12
      - rhea: RHEA:28406
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PE141abcpp
    - name: Phosphatidylethanolamine transport via ABC system (n-C14:1, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe141_c: -1.0
      - __Ecoli_panGEMs__pe141_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PE141abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CDAPPA181
    - name: CDP-Diacylglycerol pyrophostatase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodec11eg_c: -1.0
      - __Ecoli_panGEMs__pa181_c: 1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CDAPPA181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGSA140
    - name: Phosphatidylglycerol synthase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdtdecg_c: -1.0
      - __Ecoli_panGEMs__pgp140_c: 1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1A141pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdec7eg3p_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1A141pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1A180pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:0) 
        (periplasm)
    - metabolites: !!omap
      - 1odecg3p_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1A180pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1E140pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:0) 
        (periplasm)
    - metabolites: !!omap
      - 1agpe140_p: -1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1E140pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1E161pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpe161_p: -1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1E161pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1G140pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:0) 
        (periplasm)
    - metabolites: !!omap
      - 1tdecg3p_p: -1.0
      - g3pg_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1G140pp
      - sbo: SBO:0000176
  - !!omap
    - id: PE160abcpp
    - name: phosphatidylethanolamine transport via ABC system (n-C16:0, 
        periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pe160_c: -1.0
      - pe160_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PE160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PE161abcpp
    - name: Phosphatidylethanolamine transport via ABC system (n-C16:1, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe161_c: -1.0
      - __Ecoli_panGEMs__pe161_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PE161abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PSD141
    - name: Phosphatidylserine decarboxylase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe141_c: 1.0
      - __Ecoli_panGEMs__ps141_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PG140abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C14:0, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg140_c: -1.0
      - __Ecoli_panGEMs__pg140_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG140abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PG141abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C14:1, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg141_c: -1.0
      - __Ecoli_panGEMs__pg141_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG141abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ACONTa_1
    - name: aconitase (half-reaction A, Citrate hydro-lyase)
    - metabolites: !!omap
      - acon_c: 1.0
      - cit_c: -1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00153 or MNJNJBIH_01429
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: ACONTa_1
      - rhea: RHEA:10228
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDCP2App
    - name: Murein L,D-carboxypeptidase (murein5p5p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p3p_p: 1.0
      - __Ecoli_panGEMs__murein5p5p_p: -1.0
      - alaala_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01251 or MNJNJBIH_01813 or MNJNJBIH_00902 or 
        MNJNJBIH_01031 or MNJNJBIH_02174
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDCP2App
      - sbo: SBO:0000176
  - !!omap
    - id: 12DGR140tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C14:0)
    - metabolites: !!omap
      - 12dgr140_c: 1.0
      - 12dgr140_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR140tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PG180abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C18:0, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg180_c: -1.0
      - __Ecoli_panGEMs__pg180_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG180abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 12DGR160tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C16:0)
    - metabolites: !!omap
      - 12dgr160_c: 1.0
      - 12dgr160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR160tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PG181abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C18:1, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg181_c: -1.0
      - __Ecoli_panGEMs__pg181_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG181abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AM4PA
    - name: Anhydrous-N-Acetylmuramyl-tetrapeptide amidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_c: 1.0
      - __Ecoli_panGEMs__anhm4p_c: -1.0
      - anhm_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00141
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AM4PA
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGP141abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C14:1, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp141_c: -1.0
      - __Ecoli_panGEMs__pgp141_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP141abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGP160abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C16:0, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp160_c: -1.0
      - __Ecoli_panGEMs__pgp160_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 12DGR180tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C18:0)
    - metabolites: !!omap
      - 12dgr180_c: 1.0
      - 12dgr180_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR180tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGPP120pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg120_p: 1.0
      - __Ecoli_panGEMs__pgp120_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP181pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg181_p: 1.0
      - __Ecoli_panGEMs__pgp181_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP181pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH120pp
    - name: Cardiolipin hydrolase (periplasm, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn120_p: -1.0
      - __Ecoli_panGEMs__pa120_p: 1.0
      - __Ecoli_panGEMs__pg120_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGP180abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C18:0, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pgp180_c: -1.0
      - __Ecoli_panGEMs__pgp180_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGP180abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_dump_e
    - name: Exchange of dUMP(2-).
    - metabolites: !!omap
      - dump_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dump_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PAPA181pp
    - name: Phosphatidate phosphatase (periplasmic, n-C18:1)
    - metabolites: !!omap
      - 12dgr181_p: 1.0
      - __Ecoli_panGEMs__pa181_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA181pp
      - sbo: SBO:0000176
  - !!omap
    - id: PA140abcpp
    - name: phosphatidate transport via ABC system (n-C14:0, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pa140_c: -1.0
      - pa140_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PA140abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH140pp
    - name: Cardiolipin hydrolase (periplasm, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn140_p: -1.0
      - __Ecoli_panGEMs__pg140_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - pa140_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH140pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_12ppd__R_e
    - name: Exchange of (R)-propane-1,2-diol.
    - metabolites: !!omap
      - 12ppd__R_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_12ppd__R_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PGSA181
    - name: Phosphatidylglycerol synthase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodec11eg_c: -1.0
      - __Ecoli_panGEMs__pgp181_c: 1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP140
    - name: Phosphatidylglycerol phosphate phosphatase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg140_c: 1.0
      - __Ecoli_panGEMs__pgp140_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGPP141
    - name: Phosphatidylglycerol phosphate phosphatase (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg141_c: 1.0
      - __Ecoli_panGEMs__pgp141_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MDDCP5pp
    - name: Murein D,D-carboxypeptidase (murein5p3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4p3p_p: 1.0
      - __Ecoli_panGEMs__murein5p3p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00684 or MNJNJBIH_03525 or MNJNJBIH_00931 or 
        MNJNJBIH_05551 or MNJNJBIH_02634 or MNJNJBIH_00415
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDCP5pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTGY3pp
    - name: Murein lytic transglycosylase (murein3p3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm3p_p: 2.0
      - __Ecoli_panGEMs__murein3p3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00001 or MNJNJBIH_02939 or MNJNJBIH_01325 or 
        MNJNJBIH_03241 or MNJNJBIH_02797 or MNJNJBIH_00249 or MNJNJBIH_01234
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTGY3pp
      - sbo: SBO:0000176
  - !!omap
    - id: 12DGR120tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C12:0)
    - metabolites: !!omap
      - 12dgr120_c: 1.0
      - 12dgr120_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR120tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MDDCP4pp
    - name: Murein D,D-carboxypeptidase (murein5p4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4p4p_p: 1.0
      - __Ecoli_panGEMs__murein5p4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00684 or MNJNJBIH_03525 or MNJNJBIH_00931 or 
        MNJNJBIH_05551 or MNJNJBIH_02634 or MNJNJBIH_00415
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDCP4pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS140pp
    - name: Cardiolipin synthase (periplasmic, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn140_p: 1.0
      - __Ecoli_panGEMs__pg140_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS140pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNS141pp
    - name: Cardiolipin synthase (periplasmic, n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn141_p: 1.0
      - __Ecoli_panGEMs__pg141_p: -2.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01388
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNS141pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_o2s_e
    - name: Exchange of superoxide.
    - metabolites: !!omap
      - o2s_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_o2s_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G160pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C16:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg160_p: 1.0
      - __Ecoli_panGEMs__pg160_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PG120abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C12:0, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg120_c: -1.0
      - __Ecoli_panGEMs__pg120_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PG120abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_gal1p_e
    - name: Exchange of alpha-D-galactose 1-phosphate(2-).
    - metabolites: !!omap
      - gal1p_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gal1p_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PE140abcpp
    - name: Phosphatidylethanolamine transport via ABC system (n-C14:0, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe140_c: -1.0
      - __Ecoli_panGEMs__pe140_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PE140abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__CFAS160E
    - name: Cyclopropane fatty acid synthase (Phosphatidylethanolamine, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpe160_c: 1.0
      - __Ecoli_panGEMs__pe161_c: -1.0
      - ahcys_c: 2.0
      - amet_c: -2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01796
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CFAS160E
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1G141pp
    - name: Phospholipase A1 (phosphatidylglycerol, n-C14:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg141_p: 1.0
      - __Ecoli_panGEMs__pg141_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1G141pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL2E160
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0)
    - metabolites: !!omap
      - 2agpe160_c: -1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL2E160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G140
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg140_c: -1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G160
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg160_c: -1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CFAS180E
    - name: Cyclopropane fatty acid synthase (Phosphatidylethanolamine, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpe180_c: 1.0
      - __Ecoli_panGEMs__pe181_c: -1.0
      - ahcys_c: 2.0
      - amet_c: -2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01796
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CFAS180E
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dcmp_e
    - name: Exchange of 2'-deoxycytosine 5'-monophosphate(2-).
    - metabolites: !!omap
      - dcmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dcmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__CFAS180G
    - name: Cyclopropane fatty acid synthase (Phosphatidylglycerol, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpg180_c: 1.0
      - __Ecoli_panGEMs__pg181_c: -1.0
      - ahcys_c: 2.0
      - amet_c: -2.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01796
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CFAS180G
      - sbo: SBO:0000176
  - !!omap
    - id: PAPA160
    - name: Phosphatidate phosphatase (n-C16:0)
    - metabolites: !!omap
      - 12dgr160_c: 1.0
      - h2o_c: -1.0
      - pa160_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PAPA160
      - rhea: RHEA:43236
      - sbo: SBO:0000176
  - !!omap
    - id: 2AGPE140tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - 2agpe140_c: 1.0
      - 2agpe140_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 2AGPE140tipp
      - sbo: SBO:0000655
  - !!omap
    - id: 2AGPE160tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - 2agpe160_c: 1.0
      - 2agpe160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 2AGPE160tipp
      - sbo: SBO:0000655
  - !!omap
    - id: 2AGPE180tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - 2agpe180_c: 1.0
      - 2agpe180_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 2AGPE180tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PAPA180
    - name: Phosphatidate phosphatase (n-C18:0)
    - metabolites: !!omap
      - 12dgr180_c: 1.0
      - __Ecoli_panGEMs__pa180_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PAPA181
    - name: Phosphatidate phosphatase (n-C18:1)
    - metabolites: !!omap
      - 12dgr181_c: 1.0
      - __Ecoli_panGEMs__pa181_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPE141tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe141_c: 1.0
      - __Ecoli_panGEMs__2agpe141_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPE141tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPE161tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe161_c: 1.0
      - __Ecoli_panGEMs__2agpe161_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPE161tipp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_23ccmp_e
    - name: Exchange of 2',3'-cyclic CMP(1-).
    - metabolites: !!omap
      - 23ccmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_23ccmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA161tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C16:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hdec9eg3p_c: 1.0
      - __Ecoli_panGEMs__2hdec9eg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA161tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA181tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C18:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2odec11eg3p_c: 1.0
      - __Ecoli_panGEMs__2odec11eg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA181tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPG120tipp
    - name: 2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg120_c: 1.0
      - __Ecoli_panGEMs__2agpg120_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPG120tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2G120
    - name: Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpg120_c: -1.0
      - ddca_c: 1.0
      - g3pg_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2G120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PA141abcpp
    - name: Phosphatidate transport via ABC system (n-C14:1, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pa141_c: -1.0
      - __Ecoli_panGEMs__pa141_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PA141abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PETNT161pp
    - name: Phosphoethanolamine transferase (c-C16:1)
    - metabolites: !!omap
      - 12dgr161_p: 1.0
      - __Ecoli_panGEMs__enlipa_p: 1.0
      - __Ecoli_panGEMs__pe161_p: -1.0
      - lipa_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03943
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PETNT161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSSA160
    - name: Phosphatidylserine syntase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ps160_c: 1.0
      - cdpdhdecg_c: -1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSSA181
    - name: Phosphatidylserine syntase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdodec11eg_c: -1.0
      - __Ecoli_panGEMs__ps181_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA181
      - sbo: SBO:0000176
  - !!omap
    - id: DAGK140
    - name: diacylglycerol kinase (n-C14:0)
    - metabolites: !!omap
      - 12dgr140_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pa140_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: DAGK140
      - sbo: SBO:0000176
  - !!omap
    - id: DAGK160
    - name: diacylglycerol kinase (n-C16:0)
    - metabolites: !!omap
      - 12dgr160_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pa160_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: DAGK160
      - rhea: RHEA:63324
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DAGK141
    - name: Diacylglycerol kinase (n-C14:1)
    - metabolites: !!omap
      - 12dgr141_c: -1.0
      - __Ecoli_panGEMs__pa141_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAGK141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DAGK161
    - name: Diacylglycerol kinase (n-C16:1)
    - metabolites: !!omap
      - 12dgr161_c: -1.0
      - __Ecoli_panGEMs__pa161_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAGK161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT181
    - name: 1-octadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase 
        (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1odec11eg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__octeACP_c: -1.0
      - __Ecoli_panGEMs__pa181_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PA161abcpp
    - name: Phosphatidate transport via ABC system (n-C16:1, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pa161_c: -1.0
      - __Ecoli_panGEMs__pa161_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PA161abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PA180abcpp
    - name: Phosphatidate transport via ABC system (n-C18:0, periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pa180_c: -1.0
      - __Ecoli_panGEMs__pa180_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PA180abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PGPP161pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pg161_p: 1.0
      - __Ecoli_panGEMs__pgp161_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00460 or MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGPP161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PE120abcpp
    - name: Phosphatidylethanolamine transport via ABC system (n-C12:0, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe120_c: -1.0
      - __Ecoli_panGEMs__pe120_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PE120abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MDDEP3pp
    - name: Murein D,D-endopeptidase (murein5px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p4p_p: 1.0
      - __Ecoli_panGEMs__murein5px4p_p: -1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03525 or MNJNJBIH_02533 or MNJNJBIH_02321 or 
        MNJNJBIH_02364 or MNJNJBIH_00415 or MNJNJBIH_01789 or MNJNJBIH_02008
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDEP3pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MDDEP4pp
    - name: Murein D,D-endopeptidase (murein4px4px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4px4p4p_p: 1.0
      - __Ecoli_panGEMs__murein4px4px4p_p: -1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03525 or MNJNJBIH_02533 or MNJNJBIH_02321 or 
        MNJNJBIH_00415 or MNJNJBIH_02364 or MNJNJBIH_01789 or MNJNJBIH_02008
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDEP4pp
      - sbo: SBO:0000176
  - !!omap
    - id: PE180abcpp
    - name: phosphatidylethanolamine transport via ABC system (n-C18:0, 
        periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pe180_c: -1.0
      - pe180_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PE180abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PAPA140
    - name: Phosphatidate phosphatase (n-C14:0)
    - metabolites: !!omap
      - 12dgr140_c: 1.0
      - h2o_c: -1.0
      - pa140_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PAPA140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTGY1pp
    - name: Murein lytic transglycosylase (murein4p4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm4p_p: 2.0
      - __Ecoli_panGEMs__murein4p4p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03241 or MNJNJBIH_00001 or MNJNJBIH_02939 or 
        MNJNJBIH_01325 or MNJNJBIH_02797 or MNJNJBIH_00249 or MNJNJBIH_01234
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTGY1pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_3cmp_e
    - name: Exchange of 3'-CMP(2-).
    - metabolites: !!omap
      - 3cmp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3cmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: CGLYtex
    - name: L-Cysteinylglycine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - cgly_e: -1.0
      - cgly_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CGLYtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__3HAD40
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3haACP_c: -1.0
      - __Ecoli_panGEMs__but2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD40
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1E141pp
    - name: Phospholipase A1 (phosphatidylethanolamine, n-C14:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe141_p: 1.0
      - __Ecoli_panGEMs__pe141_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1E141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS60
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C6:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ohexACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__butACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01232 or MNJNJBIH_02527
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS60
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS160
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3opalmACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527 or MNJNJBIH_01232
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PAPA141
    - name: Phosphatidate phosphatase (n-C14:1)
    - metabolites: !!omap
      - 12dgr141_c: 1.0
      - __Ecoli_panGEMs__pa141_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PAPA161
    - name: Phosphatidate phosphatase (n-C16:1)
    - metabolites: !!omap
      - 12dgr161_c: 1.0
      - __Ecoli_panGEMs__pa161_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA161
      - sbo: SBO:0000176
  - !!omap
    - id: GTHOXtex
    - name: glutathione (ox) transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - gthox_e: -1.0
      - gthox_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GTHOXtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DSBAO1
    - name: DsbA protein reoxidation reaction (aerobic)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbaox_p: 1.0
      - __Ecoli_panGEMs__dsbard_p: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01314 and MNJNJBIH_04298
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DSBAO1
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DSBAO2
    - name: DsbA protein reoxidation reaction (anaerobic)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbaox_p: 1.0
      - __Ecoli_panGEMs__dsbard_p: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01314 and MNJNJBIH_04298
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DSBAO2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DSBDR
    - name: DsbD reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbdox_c: -1.0
      - __Ecoli_panGEMs__dsbdrd_c: 1.0
      - __Ecoli_panGEMs__trdox_c: 1.0
      - __Ecoli_panGEMs__trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02826 and MNJNJBIH_04626) or (MNJNJBIH_04210
        and MNJNJBIH_04626)
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DSBDR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__TDSR1
    - name: Thiol:disulfide reductase (DsbC)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbcox_p: -1.0
      - __Ecoli_panGEMs__dsbcrd_p: 1.0
      - __Ecoli_panGEMs__dsbdox_c: 1.0
      - __Ecoli_panGEMs__dsbdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03168 and MNJNJBIH_04626
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TDSR1
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2A120pp
    - name: Phospholipase A2 (phosphatidate, n-C12:0) (periplasm)
    - metabolites: !!omap
      - 1ddecg3p_p: 1.0
      - __Ecoli_panGEMs__pa120_p: -1.0
      - ddca_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2A120pp
      - sbo: SBO:0000176
  - !!omap
    - id: PLIPA2A160pp
    - name: Phospholipase A2 (phosphatidate, n-C16:0) (periplasm)
    - metabolites: !!omap
      - 1hdecg3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
      - pa160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PLIPA2A160pp
      - rhea: RHEA:63304
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLPNH180pp
    - name: Cardiolipin hydrolase (periplasm, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__clpn180_p: -1.0
      - __Ecoli_panGEMs__pa180_p: 1.0
      - __Ecoli_panGEMs__pg180_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLPNH180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR60
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hhexACP_c: 1.0
      - __Ecoli_panGEMs__3ohexACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR60
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR80
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hoctACP_c: 1.0
      - __Ecoli_panGEMs__3ooctACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR80
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDCP3App
    - name: Murein L,D-carboxypeptidase (murein5px3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein3px3p_p: 1.0
      - __Ecoli_panGEMs__murein5px3p_p: -1.0
      - alaala_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01031 or MNJNJBIH_02174 or MNJNJBIH_01251 or 
        MNJNJBIH_01813 or MNJNJBIH_00902
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDCP3App
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDCP1Bpp
    - name: Murein L,D-carboxypeptidase (murein4p4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4p3p_p: 1.0
      - __Ecoli_panGEMs__murein4p4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01031 or MNJNJBIH_02174 or MNJNJBIH_01251 or 
        MNJNJBIH_01813 or MNJNJBIH_00902
    - subsystem: Murein Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDCP1Bpp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPE181tipp
    - name: 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe181_c: 1.0
      - __Ecoli_panGEMs__2agpe181_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPE181tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA140tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C14:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2tdecg3p_c: 1.0
      - __Ecoli_panGEMs__2tdecg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA140tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2E120
    - name: Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2agpe120_c: -1.0
      - ddca_c: 1.0
      - g3pe_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2E120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR100x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dcaACP_c: 1.0
      - __Ecoli_panGEMs__tdec2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR100x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR120x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ddcaACP_c: 1.0
      - __Ecoli_panGEMs__tddec2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR120x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR160x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__palmACP_c: 1.0
      - __Ecoli_panGEMs__tpalm2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR160x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA160tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C16:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hdecg3p_c: 1.0
      - __Ecoli_panGEMs__2hdecg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA160tipp
      - sbo: SBO:0000655
  - !!omap
    - id: ATHRDHr
    - name: L-allo-threonine dehydrogenase
    - metabolites: !!omap
      - 2aobut_c: 1.0
      - athr__L_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01694
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: ATHRDHr
      - rhea: RHEA:30055
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA180tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C18:0) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2odecg3p_c: 1.0
      - __Ecoli_panGEMs__2odecg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA180tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2AGPA141tipp
    - name: 2-Acyl-sn-glycero-3-phosphatidate (n-C14:1) transporter via 
        facilitated diffusion (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2tdec7eg3p_c: 1.0
      - __Ecoli_panGEMs__2tdec7eg3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03096
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2AGPA141tipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__EAR140y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__myrsACP_c: 1.0
      - __Ecoli_panGEMs__tmrs2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR140y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS121
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ocddec5eACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__cdec3eACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS121
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS80
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ooctACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hexACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527 or MNJNJBIH_01232
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS80
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS100
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3odecACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - __Ecoli_panGEMs__ocACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527 or MNJNJBIH_01232
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS100
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS120
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3oddecACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__dcaACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01232 or MNJNJBIH_02527
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS120
      - sbo: SBO:0000176
  - !!omap
    - id: LSERDHr
    - name: L-serine dehydrogenase
    - metabolites: !!omap
      - 2amsa_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01694
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: LSERDHr
      - rhea: RHEA:21596
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR40
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3haACP_c: 1.0
      - __Ecoli_panGEMs__actACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR40
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR100
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hdecACP_c: 1.0
      - __Ecoli_panGEMs__3odecACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR100
      - sbo: SBO:0000176
  - !!omap
    - id: DSERDHr
    - name: D-serine dehydrogenase
    - metabolites: !!omap
      - 2amsa_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ser__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01694
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: DSERDHr
      - rhea: RHEA:30107
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD60
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hhexACP_c: -1.0
      - __Ecoli_panGEMs__thex2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD60
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD100
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C10:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hdecACP_c: -1.0
      - __Ecoli_panGEMs__tdec2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD100
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD140
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hmrsACP_c: -1.0
      - __Ecoli_panGEMs__tmrs2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD160
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hpalmACP_c: -1.0
      - __Ecoli_panGEMs__tpalm2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD160
      - sbo: SBO:0000176
  - !!omap
    - id: EX_urate_e
    - name: Exchange of 7,9-dihydro-1H-purine-2,6,8(3H)-trione.
    - metabolites: !!omap
      - urate_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_urate_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PSD120
    - name: Phosphatidylserine decarboxylase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe120_c: 1.0
      - __Ecoli_panGEMs__ps120_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT180
    - name: 1-octadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:0)
    - metabolites: !!omap
      - 1odecg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ocdcaACP_c: -1.0
      - __Ecoli_panGEMs__pa180_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT141
    - name: 1-tetradec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase 
        (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdec7eg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__pa141_c: 1.0
      - __Ecoli_panGEMs__tdeACP_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PAPA120
    - name: Phosphatidate phosphatase (n-C12:0)
    - metabolites: !!omap
      - 12dgr120_c: 1.0
      - __Ecoli_panGEMs__pa120_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01431
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAPA120
      - sbo: SBO:0000176
  - !!omap
    - id: EX_skm_e
    - name: Exchange of shikimate.
    - metabolites: !!omap
      - skm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_skm_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__cpgn_un_e
    - name: Coprogen unloaded (no Fe(III)) exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_un_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__cpgn_un_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MDDEP1pp
    - name: Murein D,D-endopeptidase (murein4px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein4p4p_p: 1.0
      - __Ecoli_panGEMs__murein4px4p_p: -1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03525 or MNJNJBIH_02533 or MNJNJBIH_02321 or 
        MNJNJBIH_01789 or MNJNJBIH_02008 or MNJNJBIH_02364 or MNJNJBIH_00415
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDEP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MDDEP2pp
    - name: Murein D,D-endopeptidase (murein3px4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein3px4p_p: -1.0
      - __Ecoli_panGEMs__murein4p3p_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03525 or MNJNJBIH_02533 or MNJNJBIH_02321 or 
        MNJNJBIH_01789 or MNJNJBIH_02008 or MNJNJBIH_02364 or MNJNJBIH_00415
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MDDEP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AGPAT161
    - name: 1-hexadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase 
        (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1hdec9eg3p_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdeACP_c: -1.0
      - __Ecoli_panGEMs__pa161_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03331
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AGPAT161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DASYN120
    - name: CDP-diacylglycerol synthetase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdddecg_c: 1.0
      - __Ecoli_panGEMs__pa120_c: -1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01552
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DASYN120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR40x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__but2eACP_c: -1.0
      - __Ecoli_panGEMs__butACP_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR40x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR60y
    - name: Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hexACP_c: 1.0
      - __Ecoli_panGEMs__thex2eACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR60y
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDEP1pp
    - name: Murein L,D-endopeptidase (murein3px3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein3p3p_p: 1.0
      - __Ecoli_panGEMs__murein3px3p_p: -1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02533
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDEP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSD181
    - name: Phosphatidylserine decarboxylase (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe181_c: 1.0
      - __Ecoli_panGEMs__ps181_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04654
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSD181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DAGK180
    - name: Diacylglycerol kinase (n-C18:0)
    - metabolites: !!omap
      - 12dgr180_c: -1.0
      - __Ecoli_panGEMs__pa180_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAGK180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DAGK181
    - name: Diacylglycerol kinase (n-C18:1)
    - metabolites: !!omap
      - 12dgr181_c: -1.0
      - __Ecoli_panGEMs__pa181_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04529
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAGK181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLDEP2pp
    - name: Murein L,D-endopeptidase (murein5px3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__murein5p3p_p: 1.0
      - __Ecoli_panGEMs__murein5px3p_p: -1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02533
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLDEP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_ag_e
    - name: Exchange of silver(1+).
    - metabolites: !!omap
      - ag_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ag_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__MLTGY2pp
    - name: Murein lytic transglycosylase (murein4p3p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm3p_p: 1.0
      - __Ecoli_panGEMs__anhgm4p_p: 1.0
      - __Ecoli_panGEMs__murein4p3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03241 or MNJNJBIH_00001 or MNJNJBIH_02939 or 
        MNJNJBIH_01325 or MNJNJBIH_02797 or MNJNJBIH_00249 or MNJNJBIH_01234
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTGY2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2E120pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C12:0) (periplasm)
    - metabolites: !!omap
      - 1agpe120_p: 1.0
      - __Ecoli_panGEMs__pe120_p: -1.0
      - ddca_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2E120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G141pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C14:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg141_p: 1.0
      - __Ecoli_panGEMs__pg141_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MLTGY4pp
    - name: Murein lytic transglycosylase (murein4px4p4p) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm4p_p: 1.0
      - __Ecoli_panGEMs__murein4px4p4p_p: -1.0
      - __Ecoli_panGEMs__murein4px4p_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00001 or MNJNJBIH_02939 or MNJNJBIH_01325 or 
        MNJNJBIH_03241 or MNJNJBIH_02797 or MNJNJBIH_00249 or MNJNJBIH_01234
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MLTGY4pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR60x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hexACP_c: 1.0
      - __Ecoli_panGEMs__thex2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR60x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G161pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C16:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg161_p: 1.0
      - __Ecoli_panGEMs__pg161_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G161pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_cys__D_e
    - name: Exchange of D-cysteine zwitterion.
    - metabolites: !!omap
      - cys__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cys__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: LPLIPAL1A120pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C12:0) 
        (periplasm)
    - metabolites: !!omap
      - 1ddecg3p_p: -1.0
      - ddca_p: 1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1A120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1A140pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:0) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdecg3p_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1A140pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EAR80x
    - name: Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ocACP_c: 1.0
      - __Ecoli_panGEMs__toct2eACP_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EAR80x
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PE181abcpp
    - name: Phosphatidylethanolamine transport via ABC system (n-C18:1, 
        periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__pe181_c: -1.0
      - __Ecoli_panGEMs__pe181_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PE181abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 12DGR161tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C16:1)
    - metabolites: !!omap
      - 12dgr161_c: 1.0
      - 12dgr161_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR161tipp
      - sbo: SBO:0000655
  - !!omap
    - id: 12DGR181tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C18:1)
    - metabolites: !!omap
      - 12dgr181_c: 1.0
      - 12dgr181_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 12DGR181tipp
      - sbo: SBO:0000655
  - !!omap
    - id: NTP11
    - name: nucleoside-triphosphatase (dITP)
    - metabolites: !!omap
      - didp_c: 1.0
      - ditp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00003
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: NTP11
      - rhea: RHEA:30859
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1A181pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1odec11eg3p_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1A181pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1E120pp
    - name: Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C12:0) 
        (periplasm)
    - metabolites: !!omap
      - 1agpe120_p: -1.0
      - ddca_p: 1.0
      - g3pe_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1E120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAR180
    - name: 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hoctaACP_c: 1.0
      - __Ecoli_panGEMs__3ooctdACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAR180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PGSA120
    - name: Phosphatidylglycerol synthase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdddecg_c: -1.0
      - __Ecoli_panGEMs__pgp120_c: 1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02070
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PGSA120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3OAS180
    - name: 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3ooctdACP_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - __Ecoli_panGEMs__palmACP_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01232 or MNJNJBIH_02527
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3OAS180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__3HAD180
    - name: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hoctaACP_c: -1.0
      - __Ecoli_panGEMs__toctd2eACP_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01066 or MNJNJBIH_00221
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__3HAD180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CDAPPA120
    - name: CDP-Diacylglycerol pyrophostatase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdddecg_c: -1.0
      - __Ecoli_panGEMs__pa120_c: 1.0
      - cmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04370
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CDAPPA120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__TDSR2
    - name: Thiol:disulfide reductase (DsbG)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dsbdox_c: 1.0
      - __Ecoli_panGEMs__dsbdrd_c: -1.0
      - __Ecoli_panGEMs__dsbgox_p: -1.0
      - __Ecoli_panGEMs__dsbgrd_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00656 and MNJNJBIH_04626
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TDSR2
      - sbo: SBO:0000655
  - !!omap
    - id: EX_acser_e
    - name: Exchange of O-acetyl-L-serine zwitterion.
    - metabolites: !!omap
      - acser_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acser_e
      - sbo: SBO:0000627
  - !!omap
    - id: GTHRDtex
    - name: glutathione transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gthrd_e: -1.0
      - gthrd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GTHRDtex
      - sbo: SBO:0000655
  - !!omap
    - id: OMMBLHX3
    - name: 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 
        (anaerobic)
    - metabolites: !!omap
      - 2omhmbl_c: 1.0
      - 2ommbl_c: -1.0
      - adp_c: 2.0
      - atp_c: -2.0
      - h2o_c: -3.0
      - h_c: 3.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pi_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OMMBLHX3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PSSA120
    - name: Phosphatidylserine syntase (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdddecg_c: -1.0
      - __Ecoli_panGEMs__ps120_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02830
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PSSA120
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__UM4PL
    - name: 
        UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine
        ligase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_c: -1.0
      - __Ecoli_panGEMs__um4p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uamr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04743
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__UM4PL
      - sbo: SBO:0000176
  - !!omap
    - id: 2MAHMP
    - name: 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphatase
    - metabolites: !!omap
      - 2mahmp_c: -1.0
      - 4ampm_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00491 or MNJNJBIH_01275
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: 2MAHMP
      - rhea: RHEA:27914
      - sbo: SBO:0000176
  - !!omap
    - id: EX_cu_e
    - name: Exchange of copper(1+).
    - metabolites: !!omap
      - cu_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cu_e
      - sbo: SBO:0000627
  - !!omap
    - id: ZN2tpp
    - name: zinc transport in via permease (no H+)
    - metabolites: !!omap
      - zn2_c: 1.0
      - zn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03353
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ZN2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: NI2tpp
    - name: nickel (+2) transport in via permease (no H+)
    - metabolites: !!omap
      - ni2_c: 1.0
      - ni2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04251
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NI2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_arbtn_e
    - name: Exchange of aerobactinate(3-).
    - metabolites: !!omap
      - arbtn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arbtn_e
      - sbo: SBO:0000627
  - !!omap
    - id: COBALT2t3pp
    - name: cobalt (Co+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - cobalt2_c: -1.0
      - cobalt2_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00821 or MNJNJBIH_04366
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: COBALT2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__23DAPPAt2pp
    - name: 2,3-diaminopropionate transport in via proton symport
    - metabolites: !!omap
      - __Ecoli_panGEMs__23dappa_c: 1.0
      - __Ecoli_panGEMs__23dappa_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__23DAPPAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: NADHPO
    - name: NADH peroxidase
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 2.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00658 and MNJNJBIH_00657
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: NADHPO
      - rhea: RHEA:18509
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD7f
    - name: Acyl-CoA dehydrogenase (hexadecanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - hdd2coa_c: 1.0
      - pmtcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD7f
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD8f
    - name: Acyl-CoA dehydrogenase (octadecanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - od2coa_c: 1.0
      - stcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD8f
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A120pp
    - name: Phospholipase A1 (phosphatidate, n-C12:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2ddecg3p_p: 1.0
      - __Ecoli_panGEMs__pa120_p: -1.0
      - ddca_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD5f
    - name: Acyl-CoA dehydrogenase (dodecanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - dd2coa_c: 1.0
      - ddcacoa_c: -1.0
      - fadh2_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD5f
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A140pp
    - name: Phospholipase A1 (phosphatidate, n-C14:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2tdecg3p_p: 1.0
      - h2o_p: -1.0
      - pa140_p: -1.0
      - ttdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A140pp
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dopa_e
    - name: Exchange of dopaminium(1+).
    - metabolites: !!omap
      - dopa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dopa_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A141pp
    - name: Phospholipase A1 (phosphatidate, n-C14:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2tdec7eg3p_p: 1.0
      - __Ecoli_panGEMs__pa141_p: -1.0
      - h2o_p: -1.0
      - ttdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A141pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A160pp
    - name: Phospholipase A1 (phosphatidate, n-C16:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hdecg3p_p: 1.0
      - h2o_p: -1.0
      - hdca_p: 1.0
      - pa160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A161pp
    - name: Phospholipase A1 (phosphatidate, n-C16:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hdec9eg3p_p: 1.0
      - __Ecoli_panGEMs__pa161_p: -1.0
      - h2o_p: -1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A161pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA1A180pp
    - name: Phospholipase A1 (phosphatidate, n-C18:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2odecg3p_p: 1.0
      - __Ecoli_panGEMs__pa180_p: -1.0
      - h2o_p: -1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA1A180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A120
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2ddecg3p_c: -1.0
      - ddca_c: 1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A120
      - sbo: SBO:0000176
  - !!omap
    - id: CAt6pp
    - name: calcium / sodium antiporter (1:1)
    - metabolites: !!omap
      - ca2_c: -1.0
      - ca2_p: 1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03540
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CAt6pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD3f
    - name: Acyl-CoA dehydrogenase (octanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - oc2coa_c: 1.0
      - octcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD3f
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD2f
    - name: Acyl-CoA dehydrogenase (hexanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - hx2coa_c: 1.0
      - hxcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD2f
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD4f
    - name: Acyl-CoA dehydrogenase (decanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - dc2coa_c: 1.0
      - dcacoa_c: -1.0
      - fadh2_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD4f
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD6f
    - name: Acyl-CoA dehydrogenase (tetradecanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - td2coa_c: 1.0
      - tdcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD6f
      - sbo: SBO:0000176
  - !!omap
    - id: EX_tartr__D_e
    - name: Exchange of D-tartrate(2-).
    - metabolites: !!omap
      - tartr__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tartr__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: GLYBt2pp
    - name: Glycine betaine transport via proton symport (periplasm)
    - metabolites: !!omap
      - glyb_c: 1.0
      - glyb_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01948 or MNJNJBIH_04594
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYBt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GALCTNt2pp
    - name: D-galactonate transport via proton symport (periplasm)
    - metabolites: !!omap
      - galctn__D_c: 1.0
      - galctn__D_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04121
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALCTNt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GALCTNLtex
    - name: L-galactonate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - galctn__L_e: -1.0
      - galctn__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01514 or MNJNJBIH_01035 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: GALCTNLtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_galctn__L_e
    - name: Exchange of L-galactonate.
    - metabolites: !!omap
      - galctn__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galctn__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: DSERt2pp
    - name: D-serine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ser__D_c: 1.0
      - ser__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04715
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DSERt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_hom__L_e
    - name: Exchange of L-homoserine zwitterion.
    - metabolites: !!omap
      - hom__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hom__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: ALAt4pp
    - name: L-alanine transport in via sodium symport (periplasm)
    - metabolites: !!omap
      - ala__L_c: 1.0
      - ala__L_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALAt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: LYSt3pp
    - name: L-lysine transport out via proton antiport (cytoplasm to periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lys__L_c: -1.0
      - lys__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03201 or MNJNJBIH_00972
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LYSt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: KDUI
    - name: 5-keto-4-deoxyuronate isomerase
    - metabolites: !!omap
      - dkdglcn_c: 1.0
      - dt5hsu_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03104
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: KDUI
      - rhea: RHEA:23896
      - sbo: SBO:0000176
  - !!omap
    - id: EX_tungs_e
    - name: Exchange of tungstate.
    - metabolites: !!omap
      - tungs_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tungs_e
      - sbo: SBO:0000627
  - !!omap
    - id: CA2t3pp
    - name: calcium (Ca+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - ca2_c: -1.0
      - ca2_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01352
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CA2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CTBTCAL2
    - name: Crotonobetaine-CoA Ligase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - ctbt_c: -1.0
      - ctbtcoa_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00060
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CTBTCAL2
      - sbo: SBO:0000176
  - !!omap
    - id: OBTFL
    - name: 2-Oxobutanoate formate lyase
    - metabolites: !!omap
      - 2obut_c: -1.0
      - coa_c: -1.0
      - for_c: 1.0
      - ppcoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ((MNJNJBIH_01006 and MNJNJBIH_01007) and 
        MNJNJBIH_02821) or (MNJNJBIH_01006 and MNJNJBIH_01007) or 
        (MNJNJBIH_01006 and MNJNJBIH_03444)
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: OBTFL
      - rhea: RHEA:28054
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FA161ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdeACP_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA161ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: BGLA1
    - name: 6-phospho-beta-glucosidase
    - metabolites: !!omap
      - 6pgg_c: -1.0
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01876 or MNJNJBIH_02964 or MNJNJBIH_04151
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: BGLA1
      - rhea: RHEA:10772
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FA141ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__tdeACP_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ttdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA141ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: THRt2pp
    - name: L-threonine efflux transport via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - thr__L_c: -1.0
      - thr__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00896 or MNJNJBIH_04261
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THRt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ARGt3pp
    - name: L-arginine transport out via proton antiport (cytoplasm to 
        periplasm)
    - metabolites: !!omap
      - arg__L_c: -1.0
      - arg__L_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03201
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARGt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FA160ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__palmACP_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA160ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: MALDtex
    - name: D-Malate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - mal__D_e: -1.0
      - mal__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MALDtex
      - sbo: SBO:0000655
  - !!omap
    - id: OROTtex
    - name: Orotate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - orot_e: -1.0
      - orot_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_01035 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: OROTtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_crn__D_e
    - name: Exchange of (S)-carnitine.
    - metabolites: !!omap
      - crn__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_crn__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: GDPMNP
    - name: GDP-mannose phyrophosphatase
    - metabolites: !!omap
      - gdpmann_c: -1.0
      - gmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - man1p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02670
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: GDPMNP
      - rhea: RHEA:27978
      - sbo: SBO:0000176
  - !!omap
    - id: OPHHX3
    - name: 2-Octaprenylphenol hydroxylase (anaerobic)
    - metabolites: !!omap
      - 2ohph_c: 1.0
      - 2oph_c: -1.0
      - adp_c: 2.0
      - atp_c: -2.0
      - h2o_c: -3.0
      - h_c: 3.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pi_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OPHHX3
      - sbo: SBO:0000176
  - !!omap
    - id: AMMQLT8
    - name: S-adenosylmethione:2-demthylmenaquinole methyltransferase 
        (menaquinone 8)
    - metabolites: !!omap
      - 2dmmql8_c: -1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
      - mql8_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04272
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: AMMQLT8
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FA120ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ddcaACP_c: -1.0
      - ddca_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA120ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FA80ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ocACP_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - octa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA80ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FA140ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA140ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: OROTt2_2pp
    - name: Orotate transport via proton symport (2 H) (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - orot_c: 1.0
      - orot_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03918
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: OROTt2_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: MALDt2_2pp
    - name: D-Malate transport via proton symport (2 H) (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - mal__D_c: 1.0
      - mal__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03918
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MALDt2_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FA100ACPHi
    - name: Fatty-acyl-ACP hydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__dcaACP_c: -1.0
      - dca_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00446
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FA100ACPHi
      - sbo: SBO:0000176
  - !!omap
    - id: CRNDCAL2
    - name: D-Carnitine-CoA Ligase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - crnDcoa_c: 1.0
      - crn__D_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00060
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CRNDCAL2
      - rhea: RHEA:30543
      - sbo: SBO:0000176
  - !!omap
    - id: 5DGLCNtex
    - name: 5-Dehydro-D-gluconate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 5dglcn_e: -1.0
      - 5dglcn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 5DGLCNtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__LalaDgluMdapDala_e
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine 
        exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdapDala_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__LalaDgluMdapDala_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_5dglcn_e
    - name: Exchange of 5-dehydro-D-gluconate.
    - metabolites: !!omap
      - 5dglcn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_5dglcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: DTARTD
    - name: D(-)-tartrate dehydratase
    - metabolites: !!omap
      - h2o_c: 1.0
      - oaa_c: 1.0
      - tartr__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04608
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DTARTD
      - rhea: RHEA:18289
      - sbo: SBO:0000176
  - !!omap
    - id: CRNCAL2
    - name: Carnitine-CoA Ligase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - crn_c: -1.0
      - crncoa_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00062
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: CRNCAL2
      - sbo: SBO:0000176
  - !!omap
    - id: CHLt2pp
    - name: choline transport via proton symport (periplasm)
    - metabolites: !!omap
      - chol_c: 1.0
      - chol_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00335 or MNJNJBIH_01948
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CHLt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYt4pp
    - name: glycine transport in via sodium symport (periplasm)
    - metabolites: !!omap
      - gly_c: 1.0
      - gly_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00018
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2E161pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C16:1) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpe161_p: 1.0
      - __Ecoli_panGEMs__pe161_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2E161pp
      - sbo: SBO:0000176
  - !!omap
    - id: PLIPA2E180pp
    - name: Phospholipase A2 (phosphatidylethanolamine, n-C18:0) (periplasm)
    - metabolites: !!omap
      - 1agpe180_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
      - pe180_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: PLIPA2E180pp
      - sbo: SBO:0000176
  - !!omap
    - id: FRULYSE
    - name: fructoselysine 3-epimerase
    - metabolites: !!omap
      - frulys_c: 1.0
      - psclys_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03728
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FRULYSE
      - rhea: RHEA:28390
      - sbo: SBO:0000176
  - !!omap
    - id: FRULYSt2pp
    - name: Fructoselysine transport via proton symport (periplasm)
    - metabolites: !!omap
      - frulys_c: 1.0
      - frulys_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03725
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FRULYSt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__LalaDgluMdap_e
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__LalaDgluMdap_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_psclys_e
    - name: Exchange of psicosyllysine(1+).
    - metabolites: !!omap
      - psclys_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_psclys_e
      - sbo: SBO:0000627
  - !!omap
    - id: TUNGStex
    - name: tungstate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tungs_e: -1.0
      - tungs_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_02410 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TUNGStex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G120pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C12:0) (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1agpg120_p: 1.0
      - __Ecoli_panGEMs__pg120_p: -1.0
      - ddca_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G120pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PLIPA2G180pp
    - name: Phospholipase A2 (phosphatidylglycerol, n-C18:0) (periplasm)
    - metabolites: !!omap
      - 1agpg180_p: 1.0
      - __Ecoli_panGEMs__pg180_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - ocdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04256
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PLIPA2G180pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL1A161pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:1) 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1hdec9eg3p_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdcea_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL1A161pp
      - sbo: SBO:0000176
  - !!omap
    - id: LPLIPAL1A160pp
    - name: Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:0) 
        (periplasm)
    - metabolites: !!omap
      - 1hdecg3p_p: -1.0
      - glyc3p_p: 1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - hdca_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00549
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: LPLIPAL1A160pp
      - rhea: RHEA:49092
      - sbo: SBO:0000176
  - !!omap
    - id: PSCLYSt2pp
    - name: psicoselysine transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - psclys_c: 1.0
      - psclys_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03725
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PSCLYSt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: LYSt2pp
    - name: L-lysine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lys__L_c: 1.0
      - lys__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02344
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LYSt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: COBALT2tpp
    - name: cobalt transport in via permease (no H+)
    - metabolites: !!omap
      - cobalt2_c: 1.0
      - cobalt2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03353 or MNJNJBIH_04251
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: COBALT2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: OXCDC
    - name: Oxalyl-CoA decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - forcoa_c: 1.0
      - h_c: -1.0
      - oxalcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02564
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: OXCDC
      - rhea: RHEA:19333
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A140
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2tdecg3p_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A160
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hdecg3p_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - hdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A161
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hdec9eg3p_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - hdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A180
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2odecg3p_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ocdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A180
      - sbo: SBO:0000176
  - !!omap
    - id: GLYt2pp
    - name: glycine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - gly_c: 1.0
      - gly_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01948 or MNJNJBIH_04715
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ALAt2pp
    - name: L-alanine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - ala__L_c: 1.0
      - ala__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04715 or MNJNJBIH_04619
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX___Ecoli_panGEMs__anhgm_e
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__anhgm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__anhgm_e
      - sbo: SBO:0000627
  - !!omap
    - id: BALAt2pp
    - name: beta-alanine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - ala_B_c: 1.0
      - ala_B_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04715
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: BALAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: DALAt2pp
    - name: D-alanine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - ala__D_c: 1.0
      - ala__D_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04715
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DALAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FE2tpp
    - name: iron (+2) transport in via permease (no H+)
    - metabolites: !!omap
      - fe2_c: 1.0
      - fe2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03353
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FE2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__LPLIPAL2A181
    - name: Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__2odec11eg3p_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ocdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04263
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LPLIPAL2A181
      - sbo: SBO:0000176
  - !!omap
    - id: EX_aacald_c
    - name: Exchange of ammonioacetaldehyde.
    - metabolites: !!omap
      - aacald_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular demand
    - annotation: !!omap
      - biggr: EX_aacald_c
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__UM3PL
    - name: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate 
        ligase
    - metabolites: !!omap
      - __Ecoli_panGEMs__LalaDgluMdap_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uamr_c: -1.0
      - ugmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04743
    - subsystem: Murein Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__UM3PL
      - sbo: SBO:0000176
  - !!omap
    - id: MN2tpp
    - name: manganese transport in via permease (no H+)
    - metabolites: !!omap
      - mn2_c: 1.0
      - mn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03353
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: MN2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: MG2tpp
    - name: magnesium (+2) transport in via diffusion
    - metabolites: !!omap
      - mg2_c: 1.0
      - mg2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04251
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: MG2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: 5MTRtex
    - name: 5-Methylthio-D-ribose transport via proton diffusion (extracellular 
        to periplasm)
    - metabolites: !!omap
      - 5mtr_e: -1.0
      - 5mtr_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_01035 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 5MTRtex
      - sbo: SBO:0000655
  - !!omap
    - id: NI2t3pp
    - name: nickle (Ni+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ni2_c: -1.0
      - ni2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04366 or MNJNJBIH_00821
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NI2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: PPAtex
    - name: propionate transport via diffusion
    - metabolites: !!omap
      - prpnte_e: -1.0
      - prpnte_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01514 or MNJNJBIH_01035 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PPAtex
      - sbo: SBO:0000655
  - !!omap
    - id: GALCTNLt2pp
    - name: L-galactonate transport via proton symport (periplasm)
    - metabolites: !!omap
      - galctn__L_c: 1.0
      - galctn__L_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04820
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALCTNLt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GALCTLO
    - name: L-galactonate oxidoreductase
    - metabolites: !!omap
      - galctn__L_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - tagur_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04822
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GALCTLO
      - rhea: RHEA:30183
      - sbo: SBO:0000176
  - !!omap
    - id: THYMt3pp
    - name: thymine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - thym_c: -1.0
      - thym_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THYMt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CLt3_2pp
    - name: chloride transport out via proton antiport (2:1) (periplasm)
    - metabolites: !!omap
      - cl_c: 2.0
      - cl_p: -2.0
      - h_c: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00194
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CLt3_2pp:2
      - sbo: SBO:0000655
  - !!omap
    - id: EX_ppal_e
    - name: Exchange of propanal.
    - metabolites: !!omap
      - ppal_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ppal_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__POR5
    - name: Pyruvate synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__flxr_c: 2.0
      - __Ecoli_panGEMs__flxso_c: -2.0
      - accoa_c: 1.0
      - co2_c: 1.0
      - coa_c: -1.0
      - h_c: 1.0
      - pyr_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01515 and MNJNJBIH_00737) or (MNJNJBIH_01515
        and MNJNJBIH_03170)
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__POR5
      - sbo: SBO:0000176
  - !!omap
    - id: HACD8
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA), peroxisomal
    - metabolites: !!omap
      - 3hodcoa_c: 1.0
      - 3ohodcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284 or MNJNJBIH_02546
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: HACD8
      - rhea: RHEA:78739
      - sbo: SBO:0000176
  - !!omap
    - id: CTECOAI8
    - name: 3-cis-2-trans-enoyl-CoA isomerase
    - metabolites: !!omap
      - octdececoa_c: -1.0
      - od2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: CTECOAI8
      - sbo: SBO:0000176
  - !!omap
    - id: CTECOAI6
    - name: 3-cis-2-trans-enoyl-CoA isomerase
    - metabolites: !!omap
      - td2coa_c: 1.0
      - tdecoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: CTECOAI6
      - sbo: SBO:0000176
  - !!omap
    - id: SELGTHR
    - name: selenate glutathione reductase
    - metabolites: !!omap
      - dgslnt_c: 1.0
      - gthox_c: 1.0
      - gthrd_c: -4.0
      - h2o_c: 3.0
      - h_c: -2.0
      - slnt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SELGTHR
      - rhea: RHEA:34903
      - sbo: SBO:0000176
  - !!omap
    - id: SELGTHR3
    - name: selenate glutathione reductase III
    - metabolites: !!omap
      - gslnt_c: -1.0
      - gthrd_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - seln_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SELGTHR3
      - rhea: RHEA:34931
      - sbo: SBO:0000176
  - !!omap
    - id: EX_slnt_e
    - name: Exchange of selenite(2-).
    - metabolites: !!omap
      - slnt_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_slnt_e
      - sbo: SBO:0000627
  - !!omap
    - id: MALCOAMT
    - name: Malonyl-CoA methyltransferase
    - metabolites: !!omap
      - ahcys_c: 1.0
      - amet_c: -1.0
      - malcoa_c: -1.0
      - malcoame_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00848
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: MALCOAMT
      - sbo: SBO:0000176
  - !!omap
    - id: PSCLYStex
    - name: psicoselysine transporter via diffusion (extracellular)
    - metabolites: !!omap
      - psclys_e: -1.0
      - psclys_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_02410 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PSCLYStex
      - sbo: SBO:0000655
  - !!omap
    - id: THYMtex
    - name: thymine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - thym_e: -1.0
      - thym_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: THYMtex
      - sbo: SBO:0000655
  - !!omap
    - id: CU2tpp
    - name: copper transport in via permease (no H+)
    - metabolites: !!omap
      - cu2_c: 1.0
      - cu2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03353
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CU2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: FE2t3pp
    - name: iron (Fe+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - fe2_c: -1.0
      - fe2_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04366
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FE2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: MN2t3pp
    - name: manganese (Mn+2) transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - mn2_c: -1.0
      - mn2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04366 or MNJNJBIH_00821
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: MN2t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: MG2t3_2pp
    - name: magnesium (Mg+2) transport in/out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: -2.0
      - h_p: 2.0
      - mg2_c: 1.0
      - mg2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: MG2t3_2pp
      - sbo: SBO:0000655
  - !!omap
    - id: CD2tpp
    - name: cadmium (+2) transport in via permease (no H+)
    - metabolites: !!omap
      - cd2_c: 1.0
      - cd2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03353
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CD2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: ETHAt2pp
    - name: ethanolamine transport in via proton symport
    - metabolites: !!omap
      - etha_c: 1.0
      - etha_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ETHAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FE3abcpp
    - name: iron (III) transport via ABC system (periplasm to cytoplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fe3_c: 1.0
      - fe3_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: FE3abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: THRA
    - name: Threonine aldolase
    - metabolites: !!omap
      - acald_c: 1.0
      - gly_c: 1.0
      - thr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02786 or MNJNJBIH_00967
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: THRA
      - rhea: RHEA:19625
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OGMEACPS
    - name: 3-Oxo-glutaryl-[ACP] methyl ester synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__malACP_c: -1.0
      - __Ecoli_panGEMs__ogmeACP_c: 1.0
      - co2_c: 1.0
      - coa_c: 1.0
      - h_c: -1.0
      - malcoame_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01228
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OGMEACPS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OGMEACPR
    - name: 3-Oxo-glutaryl-[ACP] methyl ester reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__hgmeACP_c: 1.0
      - __Ecoli_panGEMs__ogmeACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OGMEACPR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OPMEACPS
    - name: 3-Oxo-pimeloyl-[ACP] methyl ester synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__gmeACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: -1.0
      - __Ecoli_panGEMs__opmeACP_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02527
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OPMEACPS
      - sbo: SBO:0000176
  - !!omap
    - id: LIPAabctex
    - name: lipid A transport via ABC system (periplasm to extracellular)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - lipa_e: 1.0
      - lipa_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: LIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: DGUNC
    - name: diguanylate cyclase
    - metabolites: !!omap
      - cdigmp_c: 1.0
      - gtp_c: -2.0
      - ppi_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01507 or MNJNJBIH_01937 or MNJNJBIH_01690 or 
        MNJNJBIH_01638 or ((MNJNJBIH_02254 and MNJNJBIH_00426) and 
        MNJNJBIH_02109)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DGUNC
      - rhea: RHEA:24898
      - sbo: SBO:0000176
  - !!omap
    - id: XYLK2
    - name: L-xylulokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - xu5p__L_c: 1.0
      - xylu__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03982
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: XYLK2
      - rhea: RHEA:18869
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLBRAN2:2
    - name: 1,4-alpha-glucan branching enzyme (glycogen -> bglycogen)
    - metabolites: !!omap
      - __Ecoli_panGEMs__bglycogen_c: -1.0
      - __Ecoli_panGEMs__glycogen_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03800
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLBRAN2
      - sbo: SBO:0000176
  - !!omap
    - id: LALADGLUtex
    - name: L-alanyl-D-glutamate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - LalaDglu_e: -1.0
      - LalaDglu_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01514 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LALADGLUtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__S2FE2SR
    - name: SUF [2Fe-2S] regeneration
    - metabolites: !!omap
      - __Ecoli_panGEMs__2fe1s_c: -1.0
      - __Ecoli_panGEMs__sufbcd_2fe2s_c: 1.0
      - __Ecoli_panGEMs__sufbcd_c: -1.0
      - __Ecoli_panGEMs__sufse_c: 1.0
      - __Ecoli_panGEMs__sufsesh_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 5.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01816 and MNJNJBIH_01815 and MNJNJBIH_01818 
        and MNJNJBIH_01817 and MNJNJBIH_01819
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__S2FE2SR
      - sbo: SBO:0000176
  - !!omap
    - id: CDGUNPD
    - name: cyclic bis(3->5')diguanylate phosphodiesterase
    - metabolites: !!omap
      - 5pg35pg_c: 1.0
      - cdigmp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02716 or MNJNJBIH_01637 or MNJNJBIH_03914 or 
        MNJNJBIH_01440 or MNJNJBIH_00337
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: CDGUNPD
      - rhea: RHEA:24902
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT8r
    - name: acetyl-CoA acyltransferase (hexadecanoyl-CoA), (r)
    - metabolites: !!omap
      - 3ohodcoa_c: -1.0
      - accoa_c: 1.0
      - coa_c: -1.0
      - pmtcoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02547 or MNJNJBIH_04283
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACACT8r
      - rhea: RHEA:35279
      - sbo: SBO:0000176
  - !!omap
    - id: LALALGLUtpp
    - name: L-alanyl-L-glutamate transport in via proton symport (periplasm)
    - metabolites: !!omap
      - LalaLglu_c: 1.0
      - LalaLglu_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01765 or MNJNJBIH_03877 or MNJNJBIH_04619 or 
        MNJNJBIH_00769
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LALALGLUtpp
      - sbo: SBO:0000655
  - !!omap
    - id: CTECOAI7
    - name: 3-cis-2-trans-enoyl-CoA isomerase
    - metabolites: !!omap
      - hdcoa_c: -1.0
      - hdd2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04284
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: CTECOAI7
      - rhea: RHEA:28771
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CLIPAabctex
    - name: Cold lipid A transport via ABC system (periplasm to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__lipa_cold_e: 1.0
      - __Ecoli_panGEMs__lipa_cold_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CLIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: K2L4Aabctex
    - name: KDO(2)-lipid IV A transport via ABC system (periplasm to 
        extracellular)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - kdo2lipid4_e: 1.0
      - kdo2lipid4_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: K2L4Aabctex
      - sbo: SBO:0000655
  - !!omap
    - id: FDH4pp
    - name: formate dehydrogenase (quinone-8) (periplasm)
    - metabolites: !!omap
      - co2_p: 1.0
      - for_p: -1.0
      - h_c: -2.0
      - h_p: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04341 and MNJNJBIH_04343 and MNJNJBIH_04340)
        or (MNJNJBIH_01621 and MNJNJBIH_01624 and MNJNJBIH_01623)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: FDH4pp
      - sbo: SBO:0000655
  - !!omap
    - id: FDH5pp
    - name: Formate Dehydrogenase (menaquinone-8) (periplasm)
    - metabolites: !!omap
      - co2_p: 1.0
      - for_p: -1.0
      - h_c: -2.0
      - h_p: 1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01621 and MNJNJBIH_01624 and MNJNJBIH_01623)
        or (MNJNJBIH_04341 and MNJNJBIH_04343 and MNJNJBIH_04340)
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: FDH5pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT140
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdecg3p_c: 1.0
      - __Ecoli_panGEMs__ttdcap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT140
      - sbo: SBO:0000176
  - !!omap
    - id: LDGUNPD
    - name: linear diguanylate phosphodiesterase
    - metabolites: !!omap
      - 5pg35pg_c: -1.0
      - gmp_c: 2.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01440
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: LDGUNPD
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MPTAT
    - name: Molybdopterin adenylyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__mpt_c: -1.0
      - __Ecoli_panGEMs__mptamp_c: 1.0
      - atp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00022
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MPTAT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT141
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdec7eg3p_c: 1.0
      - __Ecoli_panGEMs__ttdceap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MOADSUx
    - name: MoaD sulfuration (nadh, assumed)
    - metabolites: !!omap
      - __Ecoli_panGEMs__iscs_c: 1.0
      - __Ecoli_panGEMs__iscssh_c: -1.0
      - __Ecoli_panGEMs__moadamp_c: -1.0
      - __Ecoli_panGEMs__moadcosh_c: 1.0
      - amp_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00855 and MNJNJBIH_02756
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MOADSUx
      - sbo: SBO:0000176
  - !!omap
    - id: 3HPPtex
    - name: 3-hydroxypropionate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 3hpp_e: -1.0
      - 3hpp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_01035 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: 3HPPtex
      - sbo: SBO:0000655
  - !!omap
    - id: CMtpp
    - name: Chloramphenicol transport via TolC system
    - metabolites: !!omap
      - cm_e: 1.0
      - cm_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CMtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FUSAtpp
    - name: Fusidic acid transport via TolC system
    - metabolites: !!omap
      - __Ecoli_panGEMs__fusa_e: 1.0
      - __Ecoli_panGEMs__fusa_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FUSAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT181
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1odec11eg3p_c: 1.0
      - __Ecoli_panGEMs__ocdceap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APH140
    - name: Acylphosphatase (C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ttdcap_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APH160
    - name: Acylphosphatase (C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hdcap_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - hdca_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OPMEACPD
    - name: 3-Oxo-pimeloyl-[ACP] methyl ester dehydratase
    - metabolites: !!omap
      - __Ecoli_panGEMs__epmeACP_c: 1.0
      - __Ecoli_panGEMs__hpmeACP_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00221
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OPMEACPD
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EPMEACPR
    - name: Enoylpimeloyl-[ACP] methyl ester reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__epmeACP_c: -1.0
      - __Ecoli_panGEMs__pmeACP_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EPMEACPR
      - sbo: SBO:0000176
  - !!omap
    - id: MINCYCtex
    - name: Minocycline transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - mincyc_e: -1.0
      - mincyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MINCYCtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__AOXSr2
    - name: 8-amino-7-oxononanoate synthase
    - metabolites: !!omap
      - 8aonn_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__pimACP_c: -1.0
      - ala__L_c: -1.0
      - co2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00847
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AOXSr2
      - sbo: SBO:0000176
  - !!omap
    - id: MINCYCtpp
    - name: Minocycline transport via TolC system
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - mincyc_e: 1.0
      - mincyc_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: MINCYCtpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_LalaDglu_e
    - name: Exchange of L-alanyl-D-glutamate(1-).
    - metabolites: !!omap
      - LalaDglu_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_LalaDglu_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__SCYSDS
    - name: SUF Cysteine desulfuration
    - metabolites: !!omap
      - __Ecoli_panGEMs__sufse_c: -1.0
      - __Ecoli_panGEMs__sufsesh_c: 1.0
      - ala__L_c: 1.0
      - cys__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01816 and MNJNJBIH_01815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__SCYSDS
      - sbo: SBO:0000176
  - !!omap
    - id: DOXRBCNtex
    - name: Doxorubicin transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - doxrbcn_e: -1.0
      - doxrbcn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_02410 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DOXRBCNtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: DOXRBCNtpp
    - name: Doxorubicin transport via TolC system
    - metabolites: !!omap
      - doxrbcn_e: 1.0
      - doxrbcn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: DOXRBCNtpp:2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__S2FE2SS
    - name: SUF [2Fe-2S] Synthesis
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__sufbcd_2fe2s_c: 1.0
      - __Ecoli_panGEMs__sufbcd_c: -1.0
      - __Ecoli_panGEMs__sufse_c: 2.0
      - __Ecoli_panGEMs__sufsesh_c: -2.0
      - adp_c: 1.0
      - atp_c: -1.0
      - fadh2_c: -1.0
      - fe2_c: -2.0
      - h2o_c: -1.0
      - h_c: 7.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01816 and MNJNJBIH_01819 and MNJNJBIH_01817 
        and MNJNJBIH_01818 and MNJNJBIH_01815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__S2FE2SS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__S4FE4SR
    - name: SUF [4Fe-4S] Reduction
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__sufbcd_2fe2s2_c: -1.0
      - __Ecoli_panGEMs__sufbcd_4fe4s_c: 1.0
      - fadh2_c: -1.0
      - h_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01818 and MNJNJBIH_01817 and MNJNJBIH_01819
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__S4FE4SR
      - sbo: SBO:0000176
  - !!omap
    - id: CCGS
    - name: 7-cyano-7-carbaguanine synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cdg_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - nh4_c: -1.0
      - pi_c: 1.0
      - preq0_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00488
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CCGS
      - rhea: RHEA:27982
      - sbo: SBO:0000176
  - !!omap
    - id: SELtex
    - name: selenate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - sel_e: -1.0
      - sel_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_01035 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SELtex
      - sbo: SBO:0000655
  - !!omap
    - id: SELR
    - name: selenate reductase
    - metabolites: !!omap
      - h2o_c: 1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - sel_c: -1.0
      - slnt_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01714 and MNJNJBIH_01715 and MNJNJBIH_01713 
        and MNJNJBIH_01712
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SELR
      - rhea: RHEA:34939
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OGMEACPD
    - name: 3-Oxo-glutaryl-[ACP] methyl ester dehydratase
    - metabolites: !!omap
      - __Ecoli_panGEMs__egmeACP_c: 1.0
      - __Ecoli_panGEMs__hgmeACP_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00221
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OGMEACPD
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__EGMEACPR
    - name: Enoylglutaryl-[ACP] methyl ester reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__egmeACP_c: -1.0
      - __Ecoli_panGEMs__gmeACP_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01444
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__EGMEACPR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OPMEACPR
    - name: 3-Oxo-pimeloyl-[ACP] methyl ester reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__hpmeACP_c: 1.0
      - __Ecoli_panGEMs__opmeACP_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01230
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OPMEACPR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PMEACPE
    - name: Pimeloyl-[ACP] methyl ester esterase
    - metabolites: !!omap
      - __Ecoli_panGEMs__pimACP_c: 1.0
      - __Ecoli_panGEMs__pmeACP_c: -1.0
      - h2o_c: -1.0
      - meoh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03774
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PMEACPE
      - sbo: SBO:0000176
  - !!omap
    - id: REPHACCOAI
    - name: ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming)
    - metabolites: !!omap
      - 2oxpaccoa_c: 1.0
      - rephaccoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01535
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: REPHACCOAI
      - rhea: RHEA:31843
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT160
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C16:0)
    - metabolites: !!omap
      - 1hdecg3p_c: 1.0
      - __Ecoli_panGEMs__hdcap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT161
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1hdec9eg3p_c: 1.0
      - __Ecoli_panGEMs__hdceap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT161
      - sbo: SBO:0000176
  - !!omap
    - id: MEOHtex
    - name: Methanol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - meoh_e: -1.0
      - meoh_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: MEOHtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_5mtr_e
    - name: Exchange of S-methyl-5-thio-D-ribofuranose.
    - metabolites: !!omap
      - 5mtr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_5mtr_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT180
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C18:0)
    - metabolites: !!omap
      - 1odecg3p_c: 1.0
      - __Ecoli_panGEMs__ocdcap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ICYSDS
    - name: ISC Cysteine desulfuration
    - metabolites: !!omap
      - __Ecoli_panGEMs__iscs_c: -1.0
      - __Ecoli_panGEMs__iscssh_c: 1.0
      - ala__L_c: 1.0
      - cys__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02756
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ICYSDS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MECDPDH5
    - name: 2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase
    - metabolites: !!omap
      - 2mecdp_c: -1.0
      - __Ecoli_panGEMs__flxr_c: -2.0
      - __Ecoli_panGEMs__flxso_c: 2.0
      - h2mb4p_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02732 and MNJNJBIH_03170) or (MNJNJBIH_02732
        and MNJNJBIH_00737)
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MECDPDH5
      - sbo: SBO:0000176
  - !!omap
    - id: CDGR
    - name: 7-cyano-7-deazaguanine reductase
    - metabolites: !!omap
      - h_c: -3.0
      - nadp_c: 2.0
      - nadph_c: -2.0
      - preq0_c: -1.0
      - preq1_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04661
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CDGR
      - rhea: RHEA:13409
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNTR1c2
    - name: Ribonucleoside-triphosphate reductase (ATP) (flavodoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__flxr_c: -2.0
      - __Ecoli_panGEMs__flxso_c: 2.0
      - atp_c: -1.0
      - datp_c: 1.0
      - h2o_c: 1.0
      - h_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04376 and MNJNJBIH_00737 and MNJNJBIH_04748 
        and MNJNJBIH_04747) or (MNJNJBIH_04376 and MNJNJBIH_03170 and 
        MNJNJBIH_04748 and MNJNJBIH_04747) or (MNJNJBIH_00737 and 
        MNJNJBIH_04748) or (MNJNJBIH_03170 and MNJNJBIH_04748)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNTR1c2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNTR2c2
    - name: Ribonucleoside-triphosphate reductase (GTP) (flavodoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__flxr_c: -2.0
      - __Ecoli_panGEMs__flxso_c: 2.0
      - dgtp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: 1.0
      - h_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04376 and MNJNJBIH_03170 and MNJNJBIH_04748 
        and MNJNJBIH_04747) or (MNJNJBIH_03170 and MNJNJBIH_04748) or 
        (MNJNJBIH_04376 and MNJNJBIH_00737 and MNJNJBIH_04748 and 
        MNJNJBIH_04747) or (MNJNJBIH_00737 and MNJNJBIH_04748)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNTR2c2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__I4FE4SR
    - name: ISC [4Fe-4S] Reduction
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__iscu_2fe2s2_c: -1.0
      - __Ecoli_panGEMs__iscu_4fe4s_c: 1.0
      - fadh2_c: -1.0
      - h_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02755
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__I4FE4SR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__S2FE2ST
    - name: SUF [2Fe-2S] Transfer
    - metabolites: !!omap
      - 2fe2s_c: 1.0
      - __Ecoli_panGEMs__sufbcd_2fe2s_c: -1.0
      - __Ecoli_panGEMs__sufbcd_c: 1.0
      - h_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01818 and MNJNJBIH_01817 and MNJNJBIH_01820 
        and MNJNJBIH_01819
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__S2FE2ST
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNTR3c2
    - name: Ribonucleoside-triphosphate reductase (CTP) (flavodoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__flxr_c: -2.0
      - __Ecoli_panGEMs__flxso_c: 2.0
      - ctp_c: -1.0
      - dctp_c: 1.0
      - h2o_c: 1.0
      - h_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04376 and MNJNJBIH_00737 and MNJNJBIH_04748 
        and MNJNJBIH_04747) or (MNJNJBIH_04376 and MNJNJBIH_03170 and 
        MNJNJBIH_04748 and MNJNJBIH_04747) or (MNJNJBIH_03170 and 
        MNJNJBIH_04748) or (MNJNJBIH_00737 and MNJNJBIH_04748)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNTR3c2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RNTR4c2
    - name: Ribonucleoside-triphosphate reductase (UTP) (flavodoxin)
    - metabolites: !!omap
      - __Ecoli_panGEMs__flxr_c: -2.0
      - __Ecoli_panGEMs__flxso_c: 2.0
      - dutp_c: 1.0
      - h2o_c: 1.0
      - h_c: -2.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04376 and MNJNJBIH_00737 and MNJNJBIH_04748 
        and MNJNJBIH_04747) or (MNJNJBIH_04376 and MNJNJBIH_03170 and 
        MNJNJBIH_04748 and MNJNJBIH_04747) or (MNJNJBIH_00737 and 
        MNJNJBIH_04748) or (MNJNJBIH_03170 and MNJNJBIH_04748)
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RNTR4c2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BWCOGDS1
    - name: Tungsten bispterin guanine dinucleotide synthase (single GDP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__bwco1gdp_c: 1.0
      - __Ecoli_panGEMs__bwco_c: -1.0
      - gtp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04295 and MNJNJBIH_04294) or MNJNJBIH_04295
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BWCOGDS1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BWCOGDS2
    - name: Tungsten bispterin guanine dinucleotide synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__bwco1gdp_c: -1.0
      - __Ecoli_panGEMs__bwcogdp_c: 1.0
      - gtp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04295 and MNJNJBIH_04294) or MNJNJBIH_04295
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BWCOGDS2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FLDR2
    - name: Flavodoxin reductase (NADPH)
    - metabolites: !!omap
      - __Ecoli_panGEMs__flxr_c: 2.0
      - __Ecoli_panGEMs__flxso_c: -2.0
      - h_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04376 and MNJNJBIH_03170) or (MNJNJBIH_04376
        and MNJNJBIH_00737)
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FLDR2
      - sbo: SBO:0000176
  - !!omap
    - id: CDGS
    - name: 7-deaza-7-carboxyguanine synthase
    - metabolites: !!omap
      - cdg_c: 1.0
      - cph4_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CDGS
      - rhea: RHEA:27974
      - sbo: SBO:0000176
  - !!omap
    - id: 5MTRtpp
    - name: 5-Methylthio-D-ribose transport via proton symport (periplasm)
    - metabolites: !!omap
      - 5mtr_c: -1.0
      - 5mtr_p: 1.0
      - h_c: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 5MTRtpp
      - sbo: SBO:0000655
  - !!omap
    - id: TTRCYCtex
    - name: Tetracycline transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ttrcyc_e: -1.0
      - ttrcyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_00290 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TTRCYCtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DHNPTE
    - name: Dihydroneopterin epimerase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dhnpt_c: -1.0
      - dhmpt_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03375
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DHNPTE
      - sbo: SBO:0000176
  - !!omap
    - id: DHMPTR
    - name: Dihydromonapterin reductase
    - metabolites: !!omap
      - dhmpt_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - thmnp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01731
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHMPTR
      - sbo: SBO:0000176
  - !!omap
    - id: NOVBCNtpp
    - name: Novobiocin transport via TolC system
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - novbcn_e: 1.0
      - novbcn_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: NOVBCNtpp:2
      - sbo: SBO:0000655
  - !!omap
    - id: CMtex
    - name: Chloramphenicol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cm_e: -1.0
      - cm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CMtex
      - sbo: SBO:0000655
  - !!omap
    - id: TTRCYCtpp
    - name: Tetracycline transport via TolC system
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ttrcyc_e: 1.0
      - ttrcyc_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: TTRCYCtpp
      - sbo: SBO:0000655
  - !!omap
    - id: LALALGLUtex
    - name: L-alanyl-L-glutamate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - LalaLglu_e: -1.0
      - LalaLglu_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: LALALGLUtex
      - sbo: SBO:0000655
  - !!omap
    - id: LALADGLUtpp
    - name: L-alanyl-D-glutamate transport in via proton symport (periplasm)
    - metabolites: !!omap
      - LalaDglu_c: 1.0
      - LalaDglu_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00769 or MNJNJBIH_01765 or MNJNJBIH_03877 or 
        MNJNJBIH_04619
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LALADGLUtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__I2FE2SS
    - name: ISC [2Fe-2S] Synthesis
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__iscs_c: 2.0
      - __Ecoli_panGEMs__iscssh_c: -2.0
      - __Ecoli_panGEMs__iscu_2fe2s_c: 1.0
      - __Ecoli_panGEMs__iscu_c: -1.0
      - fadh2_c: -1.0
      - fe2_c: -2.0
      - h_c: 6.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02756 and MNJNJBIH_02755
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__I2FE2SS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__I2FE2ST
    - name: ISC [2Fe-2S] Transfer
    - metabolites: !!omap
      - 2fe2s_c: 1.0
      - __Ecoli_panGEMs__iscu_2fe2s_c: -1.0
      - __Ecoli_panGEMs__iscu_c: 1.0
      - h_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02755 and MNJNJBIH_02754
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__I2FE2ST
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FESR
    - name: Iron-sulfur cluster repair
    - metabolites: !!omap
      - 4fe4s_c: 1.0
      - __Ecoli_panGEMs__3fe4s_c: -1.0
      - fe2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04716
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FESR
      - sbo: SBO:0000176
  - !!omap
    - id: OXCOAHDH
    - name: oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde 
        dehydrogenase (NADP+)
    - metabolites: !!omap
      - 2oxpaccoa_c: -1.0
      - 3oxdhscoa_c: 1.0
      - h2o_c: -2.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01528
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: OXCOAHDH
      - rhea: RHEA:34875
      - sbo: SBO:0000176
  - !!omap
    - id: DHACOAH
    - name: 2,3-dehydroadipyl-CoA hydratase
    - metabolites: !!omap
      - 23dhacoa_c: -1.0
      - 3hadpcoa_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01534
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DHACOAH
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__I2FE2SS2
    - name: ISC [2Fe-2S] Synthesis II
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__iscs_c: 2.0
      - __Ecoli_panGEMs__iscssh_c: -2.0
      - __Ecoli_panGEMs__iscu_2fe2s2_c: 1.0
      - __Ecoli_panGEMs__iscu_2fe2s_c: -1.0
      - fadh2_c: -1.0
      - fe2_c: -2.0
      - h_c: 6.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02756 and MNJNJBIH_02755
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__I2FE2SS2
      - sbo: SBO:0000176
  - !!omap
    - id: MSAR
    - name: malonic semialdehyde reductase
    - metabolites: !!omap
      - 3hpp_c: 1.0
      - h_c: -1.0
      - msa_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01128 or MNJNJBIH_01694
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: MSAR
      - rhea: RHEA:26438
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__I4FE4ST
    - name: ISC [4Fe-4S] Transfer
    - metabolites: !!omap
      - 4fe4s_c: 1.0
      - __Ecoli_panGEMs__iscu_4fe4s_c: -1.0
      - __Ecoli_panGEMs__iscu_c: 1.0
      - h_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02755 and MNJNJBIH_02754
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__I4FE4ST
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__S4FE4ST
    - name: SUF [4Fe-4S] Transfer
    - metabolites: !!omap
      - 4fe4s_c: 1.0
      - __Ecoli_panGEMs__sufbcd_4fe4s_c: -1.0
      - __Ecoli_panGEMs__sufbcd_c: 1.0
      - h_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01818 and MNJNJBIH_01817 and MNJNJBIH_01820 
        and MNJNJBIH_01819
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__S4FE4ST
      - sbo: SBO:0000176
  - !!omap
    - id: THFAT
    - name: Aminomethyltransferase
    - metabolites: !!omap
      - 5fthf_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - methf_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02786
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: THFAT
      - rhea: RHEA:34767
      - sbo: SBO:0000176
  - !!omap
    - id: THFAT:2
    - name: Aminomethyltransferase
    - metabolites: !!omap
      - 5fthf_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - methf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03188
    - subsystem: Folate Metabolism
    - annotation: !!omap
      - biggr: THFAT
      - rhea: RHEA:34767
      - sbo: SBO:0000176
  - !!omap
    - id: SLNTtex
    - name: selenite transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - slnt_e: -1.0
      - slnt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_01035 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: SLNTtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__S2FE2SS2
    - name: SUF [2Fe-2S] Synthesis II
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - __Ecoli_panGEMs__sufbcd_2fe2s2_c: 1.0
      - __Ecoli_panGEMs__sufbcd_2fe2s_c: -1.0
      - __Ecoli_panGEMs__sufse_c: 2.0
      - __Ecoli_panGEMs__sufsesh_c: -2.0
      - adp_c: 1.0
      - atp_c: -1.0
      - fadh2_c: -1.0
      - fe2_c: -2.0
      - h2o_c: -1.0
      - h_c: 7.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01816 and MNJNJBIH_01819 and MNJNJBIH_01817 
        and MNJNJBIH_01818 and MNJNJBIH_01815
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__S2FE2SS2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BTS5
    - name: Biotin synthase
    - metabolites: !!omap
      - 2fe2s_c: -1.0
      - __Ecoli_panGEMs__2fe1s_c: 1.0
      - amet_c: -1.0
      - btn_c: 1.0
      - dad_5_c: 1.0
      - dtbt_c: -1.0
      - h_c: 1.0
      - met__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00846
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BTS5
      - sbo: SBO:0000176
  - !!omap
    - id: SELGTHR2
    - name: selenate glutathione reductase II
    - metabolites: !!omap
      - dgslnt_c: -1.0
      - gslnt_c: 1.0
      - gthrd_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SELGTHR2
      - rhea: RHEA:34927
      - sbo: SBO:0000176
  - !!omap
    - id: EX_LalaLglu_e
    - name: Exchange of L-alanyl-L-glutamate(1-).
    - metabolites: !!omap
      - LalaLglu_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_LalaLglu_e
      - sbo: SBO:0000627
  - !!omap
    - id: GDPTPDP
    - name: guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase
    - metabolites: !!omap
      - gdptp_c: -1.0
      - gtp_c: 1.0
      - h2o_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04061
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GDPTPDP:2
      - rhea: RHEA:33055
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LIPOS
    - name: Lipoate synthase
    - metabolites: !!omap
      - 2fe2s_c: 1.0
      - 4fe4s_c: -1.0
      - __Ecoli_panGEMs__lipopb_c: 1.0
      - __Ecoli_panGEMs__octapb_c: -1.0
      - amet_c: -2.0
      - dad_5_c: 2.0
      - fe2_c: 2.0
      - h_c: -1.0
      - met__L_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00680
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPOS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__COLIPAKpp
    - name: Lipid A core kinase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_p: -1.0
      - __Ecoli_panGEMs__colipap_p: 1.0
      - udcpdp_p: -1.0
      - udcpp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02363
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__COLIPAKpp
      - sbo: SBO:0000176
  - !!omap
    - id: 3HPPtpp
    - name: 3-hydroxypropionate transport via proton symport (periplasm)
    - metabolites: !!omap
      - 3hpp_c: -1.0
      - 3hpp_p: 1.0
      - h_c: -1.0
      - h_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 3HPPtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__MPTSS
    - name: Molybdopterin synthase sulfurylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__moadamp_c: 1.0
      - __Ecoli_panGEMs__moadcoo_c: -1.0
      - atp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00917
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MPTSS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CPMPS
    - name: Cyclic pyranopterin monophosphate synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpmp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00854 and MNJNJBIH_00852
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPMPS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LIPOCT
    - name: Lipoyl(octanoyl) transferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ocACP_c: -1.0
      - __Ecoli_panGEMs__octapb_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00682
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPOCT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LIPATPT
    - name: Lipoate-ATP adenylate transferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__lipoamp_c: 1.0
      - atp_c: -1.0
      - lipoate_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04862
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPATPT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__LIPAMPL
    - name: Lipoyl-adenylate protein ligase
    - metabolites: !!omap
      - __Ecoli_panGEMs__lipoamp_c: -1.0
      - __Ecoli_panGEMs__lipopb_c: 1.0
      - amp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04862
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__LIPAMPL
      - sbo: SBO:0000176
  - !!omap
    - id: ALDD19xr
    - name: aldehyde dehydrogenase (phenylacetaldehyde, NAD)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pac_c: 1.0
      - pacald_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01526
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALDD19xr
      - rhea: RHEA:21392
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MOGDS
    - name: Molybdopterin guanine dinucleotide synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__moco_c: -1.0
      - __Ecoli_panGEMs__mocogdp_c: 1.0
      - gtp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04295 and MNJNJBIH_04294) or MNJNJBIH_04295
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MOGDS
      - sbo: SBO:0000176
  - !!omap
    - id: CPH4S
    - name: 6-carboxy-5,6,7,8-tetrahydropterin synthase
    - metabolites: !!omap
      - acald_c: 1.0
      - ahdt_c: -1.0
      - cph4_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03018
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CPH4S:2
      - rhea: RHEA:27966
      - sbo: SBO:0000176
  - !!omap
    - id: RFAMPtpp
    - name: Rifampin transport via TolC system
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - rfamp_e: 1.0
      - rfamp_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_00509)
        or (MNJNJBIH_00510 and MNJNJBIH_03348 and MNJNJBIH_02675)
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: RFAMPtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SHCHCS3
    - name: 2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase
    - metabolites: !!omap
      - 2sephchc_c: -1.0
      - 2shchc_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02460
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: SHCHCS3
      - rhea: RHEA:25597
      - sbo: SBO:0000176
  - !!omap
    - id: VPAMTr
    - name: Valine-pyruvate aminotransferase
    - metabolites: !!omap
      - 3mob_c: -1.0
      - ala__L_c: -1.0
      - pyr_c: 1.0
      - val__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03974
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: VPAMTr
      - rhea: RHEA:22912
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOLIPAabctex
    - name: Arabinose modified core oligosaccharide lipid A transport via ABC 
        system (periplasm to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__acolipa_e: 1.0
      - __Ecoli_panGEMs__acolipa_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOLIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: PYK4
    - name: Pyruvate Kinase (Anaerobic, CTP forming)
    - metabolites: !!omap
      - cdp_c: -1.0
      - ctp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02006
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PYK4
      - rhea: RHEA:56952
      - sbo: SBO:0000176
  - !!omap
    - id: NADHHR
    - name: NADH hydratase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nadh_c: -1.0
      - nadhx__R_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01923
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADHHR
      - rhea: RHEA:57360
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ECA4COLIPAabctex
    - name: Enterobacterial common antigen (x4) core oligosaccharide lipid A 
        transport via ABC system (periplasm to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__eca4colipa_e: 1.0
      - __Ecoli_panGEMs__eca4colipa_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ECA4COLIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_ttrcyc_e
    - name: Exchange of tetracycline zwitterion.
    - metabolites: !!omap
      - ttrcyc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ttrcyc_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__COLIPAPabctex
    - name: Core oligosaccharide lipid A diphosphate transport via ABC system 
        (periplasm to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipap_e: 1.0
      - __Ecoli_panGEMs__colipap_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__COLIPAPabctex
      - sbo: SBO:0000655
  - !!omap
    - id: ALAtpp
    - name: L-alanine export via facilited diffusion
    - metabolites: !!omap
      - ala__L_c: -1.0
      - ala__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02906
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: CH4tex
    - name: Methane Transport(extracellular via diffusion)
    - metabolites: !!omap
      - ch4_e: -1.0
      - ch4_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CH4tex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_mincyc_e
    - name: Exchange of minocycline zwitterion.
    - metabolites: !!omap
      - mincyc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mincyc_e
      - sbo: SBO:0000627
  - !!omap
    - id: TARTRDtex
    - name: D-tartrate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tartr__D_e: -1.0
      - tartr__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: TARTRDtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_pcresol_c
    - name: Exchange of p-cresol.
    - metabolites: !!omap
      - pcresol_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular demand
    - annotation: !!omap
      - biggr: EX_pcresol_c
      - sbo: SBO:0000627
  - !!omap
    - id: BTNt2ipp
    - name: Biotin transport via proton symport (periplasm)
    - metabolites: !!omap
      - btn_c: 1.0
      - btn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: BTNt2ipp
      - sbo: SBO:0000655
  - !!omap
    - id: URACPAH
    - name: peroxyureidoacrylate hydrolase
    - metabolites: !!omap
      - cbm_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - poaac_c: 1.0
      - uracp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01132
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: URACPAH
      - sbo: SBO:0000176
  - !!omap
    - id: BTNtex
    - name: Biotin transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - btn_e: -1.0
      - btn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01514 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: BTNtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3DHBZS3R
    - name: Fe(III)-(2,3-dihydroxybenzoylserine)3 reductase via NADPH
    - metabolites: !!omap
      - __Ecoli_panGEMs__23dhbzs3_c: 2.0
      - __Ecoli_panGEMs__fe3dhbzs3_c: -2.0
      - fe2_c: 2.0
      - h_c: 3.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03389
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3DHBZS3R
      - sbo: SBO:0000176
  - !!omap
    - id: DXYLONtpp
    - name: D-xylonate reversible tranposrt (periplasm)
    - metabolites: !!omap
      - dxylnt_c: 1.0
      - dxylnt_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DXYLONtpp
      - sbo: SBO:0000655
  - !!omap
    - id: 2DGLCptspp
    - name: 2-Deoxy-D-glucose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - 2dglc_p: -1.0
      - 2doxg6p_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02617 and MNJNJBIH_01965 and MNJNJBIH_01967 
        and MNJNJBIH_02618 and MNJNJBIH_01966
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 2DGLCptspp
      - sbo: SBO:0000655
  - !!omap
    - id: 2DGULRGx
    - name: 2-Dehydro-L-gulonate reductase to gluconate (NADH)
    - metabolites: !!omap
      - 2dhguln_c: -1.0
      - glcn_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2DGULRGx
      - sbo: SBO:0000176
  - !!omap
    - id: 2DGULRGy
    - name: 2-Dehydro-L-gulonate reductase to gluconate (NADPH)
    - metabolites: !!omap
      - 2dhguln_c: -1.0
      - glcn_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03952
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2DGULRGy
      - sbo: SBO:0000176
  - !!omap
    - id: AP4AS
    - name: Ap4A synthetase
    - metabolites: !!omap
      - ap4a_c: 1.0
      - atp_c: -2.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04618
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: AP4AS
      - rhea: RHEA:34935
      - sbo: SBO:0000176
  - !!omap
    - id: ARBTptspp
    - name: arbutin transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - arbt6p_c: 1.0
      - arbt_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04152 and MNJNJBIH_02618 and MNJNJBIH_02617
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ARBTptspp
      - sbo: SBO:0000655
  - !!omap
    - id: ARBTtex
    - name: arbutin transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - arbt_e: -1.0
      - arbt_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: ARBTtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_arbt_e
    - name: Exchange of hydroquinone O-beta-D-glucopyranoside.
    - metabolites: !!omap
      - arbt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arbt_e
      - sbo: SBO:0000627
  - !!omap
    - id: GNP
    - name: Phosphogluconate phosphatase
    - metabolites: !!omap
      - 6pgc_c: -1.0
      - glcn_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04145 or MNJNJBIH_02927
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GNP
      - sbo: SBO:0000176
  - !!omap
    - id: ALLTAMH2
    - name: Allantoate amidinohydrolase
    - metabolites: !!omap
      - alltt_c: -1.0
      - co2_c: 1.0
      - h2o_c: -1.0
      - h_c: -2.0
      - nh4_c: 1.0
      - urdgci_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00569
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: ALLTAMH2
      - rhea: RHEA:27485
      - sbo: SBO:0000176
  - !!omap
    - id: UGCIAMH
    - name: ureidoglycine aminohydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nh4_c: 1.0
      - urdgci_c: -1.0
      - urdglyc_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00568
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: UGCIAMH
      - rhea: RHEA:25241
      - sbo: SBO:0000176
  - !!omap
    - id: POAACR
    - name: peroxyaminoacrylate reductase
    - metabolites: !!omap
      - 3amac_c: 1.0
      - h2o_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - poaac_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01131
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: POAACR
      - sbo: SBO:0000176
  - !!omap
    - id: PYDXtex
    - name: pyridoxal transport via diffusion (extracellular)
    - metabolites: !!omap
      - pydx_e: -1.0
      - pydx_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PYDXtex
      - sbo: SBO:0000655
  - !!omap
    - id: PYDXtpp
    - name: pyridoxal import
    - metabolites: !!omap
      - pydx_c: 1.0
      - pydx_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PYDXtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCASPtpp
    - name: succinate:aspartate antiporter (periplasm)
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04628 or MNJNJBIH_04609 or MNJNJBIH_00673
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCASPtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__METGLCUR
    - name: 1-O-Methyl-Beta-D-glucuronidase
    - metabolites: !!omap
      - __Ecoli_panGEMs__metglcur_c: -1.0
      - glcur_c: 1.0
      - h2o_c: -1.0
      - meoh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01743
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METGLCUR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD1fr
    - name: Acyl-CoA dehydrogenase (butanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: 1.0
      - b2coa_c: -1.0
      - btcoa_c: 1.0
      - fadh2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01834
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD1fr
      - sbo: SBO:0000176
  - !!omap
    - id: 23DOGULNt4pp
    - name: Na+/ 2,3-Dioxo-L-gulonate symport (periplasm)
    - metabolites: !!omap
      - 23doguln_c: 1.0
      - 23doguln_p: -1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03979 and MNJNJBIH_03981 and MNJNJBIH_03980
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 23DOGULNt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCMALtpp
    - name: succinate:malate antiporter (periplasm)
    - metabolites: !!omap
      - mal__L_c: 1.0
      - mal__L_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04628 or MNJNJBIH_04609 or MNJNJBIH_00673
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCMALtpp
      - sbo: SBO:0000655
  - !!omap
    - id: PYDXNtex
    - name: pyridoxine transport via diffusion (extracellular)
    - metabolites: !!omap
      - pydxn_e: -1.0
      - pydxn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PYDXNtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERES
    - name: Enterochelin Esterase (Fe containing)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dhbzs3_c: 1.0
      - __Ecoli_panGEMs__feenter_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00623
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERES
      - sbo: SBO:0000176
  - !!omap
    - id: PYDXNtpp
    - name: pyridoxine import
    - metabolites: !!omap
      - pydxn_c: 1.0
      - pydxn_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PYDXNtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERR4
    - name: Fe-enterobactin reduction via nadph
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_c: -2.0
      - enter_c: 2.0
      - fe2_c: 2.0
      - h_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03389
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERR4
      - sbo: SBO:0000176
  - !!omap
    - id: DXYLONtex
    - name: D-xylonate transport via diffusion (extracellular)
    - metabolites: !!omap
      - dxylnt_e: -1.0
      - dxylnt_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_01035 or MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: DXYLONtex
      - sbo: SBO:0000655
  - !!omap
    - id: PYDAMtex
    - name: pyridoxamine transport via diffusion (extracellular)
    - metabolites: !!omap
      - pydam_e: -1.0
      - pydam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PYDAMtex
      - sbo: SBO:0000655
  - !!omap
    - id: PYDAMtpp
    - name: pyridoxamine import
    - metabolites: !!omap
      - pydam_c: 1.0
      - pydam_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PYDAMtpp
      - sbo: SBO:0000655
  - !!omap
    - id: PSURItex
    - name: Pseudouridine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - psuri_e: -1.0
      - psuri_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: PSURItex
      - sbo: SBO:0000655
  - !!omap
    - id: ALR2x
    - name: aldose reductase (methylglyoxal) (nadh)
    - metabolites: !!omap
      - acetol_c: 1.0
      - h_c: -1.0
      - mthgxl_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01915
    - subsystem: Methylglyoxal Metabolism
    - annotation: !!omap
      - biggr: ALR2x
      - rhea: RHEA:35615
      - sbo: SBO:0000176
  - !!omap
    - id: CHLt3pp
    - name: choline transport via proton antiport (periplasm)
    - metabolites: !!omap
      - chol_c: -1.0
      - chol_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05193
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CHLt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: 13PPDH2
    - name: 1,3-propanediol dehydrogenase
    - metabolites: !!omap
      - 13ppd_c: 1.0
      - 3hppnl_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03325
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 13PPDH2
      - rhea: RHEA:35599
      - sbo: SBO:0000176
  - !!omap
    - id: TARTt2_3pp
    - name: D-tartrate transport via proton symport (3 H) (periplasm)
    - metabolites: !!omap
      - h_c: 3.0
      - h_p: -3.0
      - tartr__D_c: 1.0
      - tartr__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04609
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TARTt2_3pp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCTARTtpp
    - name: succinate:D-tartrate antiporter (periplasm)
    - metabolites: !!omap
      - succ_c: -1.0
      - succ_p: 1.0
      - tartr__D_c: 1.0
      - tartr__D_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04609
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCTARTtpp
      - sbo: SBO:0000655
  - !!omap
    - id: APCS
    - name: aminopropylcadaverine synthase
    - metabolites: !!omap
      - 15dap_c: -1.0
      - 5mta_c: 1.0
      - ametam_c: -1.0
      - h_c: 1.0
      - na15dap_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00156
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: APCS
      - rhea: RHEA:33387
      - sbo: SBO:0000176
  - !!omap
    - id: CHTBSptspp
    - name: chitobiose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - chtbs6p_c: 1.0
      - chtbs_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01880 and MNJNJBIH_01879 and MNJNJBIH_01878)
        and MNJNJBIH_02617 and MNJNJBIH_02618
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CHTBSptspp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYBt3pp
    - name: Glycine betaine transport via proton antiport (periplasm)
    - metabolites: !!omap
      - glyb_c: -1.0
      - glyb_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05193
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYBt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: AI2tpp
    - name: quorum signal AI-2 exporter
    - metabolites: !!omap
      - mththf_c: -1.0
      - mththf_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01726
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: AI2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: Ftpp
    - name: F- efflux transport
    - metabolites: !!omap
      - f_c: -1.0
      - f_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00676
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: Ftpp
      - sbo: SBO:0000655
  - !!omap
    - id: SQVOSI
    - name: sulfoquinovose isomerase
    - metabolites: !!omap
      - sf_c: 1.0
      - sq_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04327
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: SQVOSI
      - sbo: SBO:0000176
  - !!omap
    - id: CHTBStex
    - name: chitobiose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - chtbs_e: -1.0
      - chtbs_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290 or MNJNJBIH_00733
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CHTBStex
      - sbo: SBO:0000655
  - !!omap
    - id: ThDPAT
    - name: ThDP adenylyl transferase
    - metabolites: !!omap
      - adp_c: -1.0
      - athtp_c: 1.0
      - h_c: -1.0
      - pi_c: 1.0
      - thmpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: ThDPAT
      - rhea: RHEA:35243
      - sbo: SBO:0000176
  - !!omap
    - id: DHPStr
    - name: 2,3-dihydroxypropane 1-sulfonate transporter
    - metabolites: !!omap
      - dhps_c: -1.0
      - dhps_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04321
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DHPStr
      - sbo: SBO:0000655
  - !!omap
    - id: SQtr
    - name: sulfoquinovose transporter
    - metabolites: !!omap
      - sq_c: 1.0
      - sq_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04320
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SQtr
      - sbo: SBO:0000655
  - !!omap
    - id: DHPStex
    - name: 2,3-dihydroxypropane 1-sulfonate transport via diffusion
    - metabolites: !!omap
      - dhps_e: -1.0
      - dhps_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04319
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: DHPStex
      - sbo: SBO:0000655
  - !!omap
    - id: APPLDHr
    - name: aminopropanol dehydrogenase reversible
    - metabolites: !!omap
      - aact_c: -1.0
      - appl_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_05169
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: APPLDHr
      - rhea: RHEA:16517
      - sbo: SBO:0000176
  - !!omap
    - id: SPMDt3pp
    - name: spermidine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - spmd_c: -1.0
      - spmd_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01725 and MNJNJBIH_01724
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SPMDt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FMNtex
    - name: FMN transport, outer membrane
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_e: 1.0
      - __Ecoli_panGEMs__fmn_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_00290 or MNJNJBIH_02410 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FMNtex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__APH141
    - name: Acylphosphatase (C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ttdceap_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
      - ttdcea_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH141
      - sbo: SBO:0000176
  - !!omap
    - id: EX_dxylnt_e
    - name: Exchange of D-xylonate.
    - metabolites: !!omap
      - dxylnt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dxylnt_e
      - sbo: SBO:0000627
  - !!omap
    - id: AI2K
    - name: autoinducer-2 kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dhptd_c: -1.0
      - dhptdp_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01663
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: AI2K
      - rhea: RHEA:15377
      - sbo: SBO:0000176
  - !!omap
    - id: MALt3pp
    - name: L-malate transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - mal__L_c: -1.0
      - mal__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MALt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CITt3pp
    - name: citrate transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - cit_c: -1.0
      - cit_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CITt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__APH161
    - name: Acylphosphatase (C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__hdceap_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - hdcea_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DHNPA2r
    - name: Dihydroneopterin aldolase reversible
    - metabolites: !!omap
      - 2ahhmp_c: 1.0
      - __Ecoli_panGEMs__dhnpt_c: -1.0
      - gcald_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03375
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DHNPA2r
      - sbo: SBO:0000176
  - !!omap
    - id: QUIN2tpp
    - name: Quinate transport (periplasm)
    - metabolites: !!omap
      - quin_c: 1.0
      - quin_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: QUIN2tpp:2
      - sbo: SBO:0000655
  - !!omap
    - id: GLYC2Pabcpp
    - name: sn-Glycerol 2-phosphate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc2p_c: 1.0
      - glyc2p_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03820 and MNJNJBIH_03823 and MNJNJBIH_03821 
        and MNJNJBIH_03822
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYC2Pabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CRNDtex
    - name: D-carnitine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - crn__D_e: -1.0
      - crn__D_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CRNDtex
      - sbo: SBO:0000655
  - !!omap
    - id: CLBtex
    - name: Cellobiose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cellb_e: -1.0
      - cellb_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01514 or MNJNJBIH_01035 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CLBtex
      - sbo: SBO:0000655
  - !!omap
    - id: ACOXT
    - name: acetyl-CoA:oxalate CoA-transferase
    - metabolites: !!omap
      - ac_c: 1.0
      - accoa_c: -1.0
      - oxa_c: -1.0
      - oxalcoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02562
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: ACOXT
      - rhea: RHEA:37883
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mththf_e
    - name: Exchange of (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol.
    - metabolites: !!omap
      - mththf_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mththf_e
      - sbo: SBO:0000627
  - !!omap
    - id: 2HESR
    - name: 2-hydroxyethyldisulfide reductase
    - metabolites: !!omap
      - dtgcl_c: -1.0
      - gthox_c: 1.0
      - gthrd_c: -2.0
      - mercpeth_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03301 or MNJNJBIH_02504
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2HESR
      - sbo: SBO:0000176
  - !!omap
    - id: CHOLID
    - name: 7-?-hydroxysteroid dehydrogenase
    - metabolites: !!omap
      - cholate_c: -1.0
      - dhcholn_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01745
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: CHOLID
      - rhea: RHEA:19409
      - sbo: SBO:0000176
  - !!omap
    - id: CHOLATEtpp
    - name: cholate transport via proton antiport
    - metabolites: !!omap
      - cholate_c: -1.0
      - cholate_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04807
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CHOLATEtpp
      - sbo: SBO:0000655
  - !!omap
    - id: NADPHHR
    - name: NADPH hydratase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nadph_c: -1.0
      - nadphx__R_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01923
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADPHHR
      - rhea: RHEA:57368
      - sbo: SBO:0000176
  - !!omap
    - id: NADPHHS
    - name: NADPH hydratase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nadph_c: -1.0
      - nadphx__S_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01923
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADPHHS
      - rhea: RHEA:57372
      - sbo: SBO:0000176
  - !!omap
    - id: 4ABZGLUH
    - name: p-aminobenzoyl-glutamate hydrolase
    - metabolites: !!omap
      - 4abz_c: 1.0
      - 4abzglu_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01503 and MNJNJBIH_01504
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: 4ABZGLUH
      - rhea: RHEA:35495
      - sbo: SBO:0000176
  - !!omap
    - id: 4ABZGLUtr
    - name: p-aminobenzoyl glutamate:H+ symporter
    - metabolites: !!omap
      - 4abzglu_c: 1.0
      - 4abzglu_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01502
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 4ABZGLUtr
      - sbo: SBO:0000655
  - !!omap
    - id: NADHHS
    - name: NADH hydratase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nadh_c: -1.0
      - nadhx__S_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01923
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADHHS
      - rhea: RHEA:57364
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APH180
    - name: Acylphosphatase (C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ocdcap_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ocdca_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH180
      - sbo: SBO:0000176
  - !!omap
    - id: PHDA
    - name: phenylhydantoinase
    - metabolites: !!omap
      - 5phdt_c: -1.0
      - 5phua_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03146
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PHDA:2
      - rhea: RHEA:51664
      - sbo: SBO:0000176
  - !!omap
    - id: TEO2M
    - name: tellurite methyltransferase
    - metabolites: !!omap
      - ahcys_c: 1.0
      - amet_c: -1.0
      - mteo2_c: 1.0
      - teo2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01576
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: TEO2M
      - sbo: SBO:0000176
  - !!omap
    - id: PACOAT
    - name: phenylacetyl-CoA thioesterase
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pac_c: 1.0
      - phaccoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01537
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PACOAT
      - rhea: RHEA:70427
      - sbo: SBO:0000176
  - !!omap
    - id: CYSItpp
    - name: cystine efflux transport
    - metabolites: !!omap
      - cysi__L_c: -1.0
      - cysi__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04403
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYSItpp
      - sbo: SBO:0000655
  - !!omap
    - id: PYK2
    - name: Pyruvate Kinase (Anaerobic, UTP forming)
    - metabolites: !!omap
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
      - udp_c: -1.0
      - utp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02006
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PYK2
      - rhea: RHEA:56948
      - sbo: SBO:0000176
  - !!omap
    - id: PYK3
    - name: Pyruvate Kinase (Anaerobic, GTP forming)
    - metabolites: !!omap
      - gdp_c: -1.0
      - gtp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02006
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PYK3
      - rhea: RHEA:30295
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__APH181
    - name: Acylphosphatase (C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ocdceap_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ocdcea_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH181
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DHPTDNR
    - name: Dihydropteridine reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dhptdn_c: -1.0
      - __Ecoli_panGEMs__thptdn_c: 1.0
      - h_c: -3.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00612
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DHPTDNR
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DHPTDNRN
    - name: Dihydropteridine reductase (NADH)
    - metabolites: !!omap
      - __Ecoli_panGEMs__dhptdn_c: -1.0
      - __Ecoli_panGEMs__thptdn_c: 1.0
      - h_c: -3.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00612
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DHPTDNRN
      - sbo: SBO:0000176
  - !!omap
    - id: GTHPi
    - name: glutathione peridoxase
    - metabolites: !!omap
      - gthox_c: 1.0
      - gthrd_c: -2.0
      - h2o2_c: -1.0
      - h2o_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01850
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: GTHPi
      - rhea: RHEA:16833
      - sbo: SBO:0000176
  - !!omap
    - id: PCNO
    - name: acrylyl-CoA reductase
    - metabolites: !!omap
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ppcoa_c: -1.0
      - prpncoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03597
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PCNO
      - rhea: RHEA:26454
      - sbo: SBO:0000176
  - !!omap
    - id: PYK6
    - name: Pyruvate Kinase (Anaerobic, dTTP forming)
    - metabolites: !!omap
      - dtdp_c: -1.0
      - dttp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02006
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PYK6
      - sbo: SBO:0000176
  - !!omap
    - id: DHNCOAT
    - name: 1,4-dihydroxy-2-napthoyl-CoA thioesterase
    - metabolites: !!omap
      - 14dhncoa_c: -1.0
      - coa_c: 1.0
      - dhna_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01822
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHNCOAT
      - rhea: RHEA:26309
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FADt
    - name: FAD transporter, periplasm
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - __Ecoli_panGEMs__fad_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02167
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FADt
      - sbo: SBO:0000655
  - !!omap
    - id: HPACOAT
    - name: hydroxyphenylacetyl-CoA thioesterase
    - metabolites: !!omap
      - 34dhpha_c: 1.0
      - 34dphacoa_c: -1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01537
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HPACOAT
      - rhea: RHEA:70419
      - sbo: SBO:0000176
  - !!omap
    - id: DC6PDA
    - name: chito-oligosaccharide mono-deacetylase
    - metabolites: !!omap
      - ac_c: 1.0
      - chtbs6p_c: -1.0
      - h2o_c: -1.0
      - mchtbs6p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01875
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DC6PDA
      - rhea: RHEA:35083
      - sbo: SBO:0000176
  - !!omap
    - id: PIt2rpp
    - name: phosphate reversible transport via symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - pi_c: 1.0
      - pi_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03874 or MNJNJBIH_03299
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: PIt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FADtex
    - name: FAD transport, outer membrane
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_e: 1.0
      - __Ecoli_panGEMs__fad_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_02410 or MNJNJBIH_01514 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FADtex
      - sbo: SBO:0000655
  - !!omap
    - id: AI2abcpp
    - name: autoinducer-2 ABC transporter
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mththf_c: 1.0
      - mththf_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01668 and MNJNJBIH_01665 and MNJNJBIH_01667 
        and MNJNJBIH_01666
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: AI2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PAI2I
    - name: Phospho-AI-2 isomerase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dhptdd_c: 1.0
      - dhptdp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01670
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAI2I
      - sbo: SBO:0000176
  - !!omap
    - id: 4HBZt3pp
    - name: 4-hydroxybenzoate transport out via antiporter
    - metabolites: !!omap
      - 4hbz_c: -1.0
      - 4hbz_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03582 and MNJNJBIH_03583
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 4HBZt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CURR
    - name: NADPH-dependent curcumin reductase
    - metabolites: !!omap
      - cur_c: -1.0
      - dhcur_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01597
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: CURR
      - rhea: RHEA:34819
      - sbo: SBO:0000176
  - !!omap
    - id: LKDRA
    - name: 2-keto-3-deoxy-L-rhamnonate aldolase
    - metabolites: !!omap
      - lald__L_c: 1.0
      - lkdr_c: -1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02441
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LKDRA
      - rhea: RHEA:25784
      - sbo: SBO:0000176
  - !!omap
    - id: LEUt2rpp
    - name: L-leucine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - leu__L_c: 1.0
      - leu__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00443
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LEUt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: LCTStpp
    - name: Lactose transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - lcts_c: 1.0
      - lcts_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00378
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LCTStpp
      - sbo: SBO:0000655
  - !!omap
    - id: ILEt3pp
    - name: L-isoleucine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ile__L_c: -1.0
      - ile__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04631
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ILEt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: METNA
    - name: L-amino acid N-acyltransferase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acmet__L_c: 1.0
      - coa_c: 1.0
      - h_c: 1.0
      - met__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01596
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: METNA
      - rhea: RHEA:44144
      - sbo: SBO:0000176
  - !!omap
    - id: METt3pp
    - name: L-methionine tranport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - met__L_c: -1.0
      - met__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01945 or MNJNJBIH_04631
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: METt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: GSNt3pp
    - name: guanosine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - gsn_c: -1.0
      - gsn_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04084
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GSNt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CLtipp
    - name: chloride ion transport in via diffusion (periplasm)
    - metabolites: !!omap
      - cl_c: 1.0
      - cl_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01717
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CLtipp:2
      - sbo: SBO:0000655
  - !!omap
    - id: 5DKGR
    - name: 5-keto-D-gluconate 5-reductase
    - metabolites: !!omap
      - 5dglcn_c: 1.0
      - glcn_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03103
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 5DKGR
      - rhea: RHEA:23940
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__XYHDL
    - name: ?-D-xyloside xylohydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__iprimv_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - xyl__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04069
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__XYHDL
      - sbo: SBO:0000176
  - !!omap
    - id: 2DGLCtex
    - name: 2-Deoxy-D-glucose transport via diffusion (extracellular)
    - metabolites: !!omap
      - 2dglc_e: -1.0
      - 2dglc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_00290 or MNJNJBIH_02410 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: 2DGLCtex
      - sbo: SBO:0000655
  - !!omap
    - id: E4PP
    - name: erythrose-4-phosphate phosphatase
    - metabolites: !!omap
      - e4p_c: -1.0
      - erthrs_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00909 or MNJNJBIH_02927 or MNJNJBIH_04264 or 
        MNJNJBIH_01868
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: E4PP
      - rhea: RHEA:66376
      - sbo: SBO:0000176
  - !!omap
    - id: PItpp
    - name: phosphate export via facillated diffusion (periplasm)
    - metabolites: !!omap
      - pi_c: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04497
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: PItpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_doxrbcn_e
    - name: doxorubicin exchange
    - metabolites: !!omap
      - doxrbcn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_doxrbcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: 6D6SFK
    - name: 6-deoxy-6-sulfofructose kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - sf_c: -1.0
      - sfp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04329
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 6D6SFK
      - rhea: RHEA:40443
      - sbo: SBO:0000176
  - !!omap
    - id: LEUt3pp
    - name: L-leucine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - leu__L_c: -1.0
      - leu__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01945 or MNJNJBIH_04631
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: LEUt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: INSt3pp
    - name: inosine transport out via proton antiport (perisplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ins_c: -1.0
      - ins_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04084
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: INSt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: INDOLEt2pp:2
    - name: Indole transport via proton symport, irreversible (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - indole_c: 1.0
      - indole_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03498
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: INDOLEt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: SQtex
    - name: sulphoquinovose transport via diffusion
    - metabolites: !!omap
      - sq_e: -1.0
      - sq_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04319
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: SQtex
      - sbo: SBO:0000655
  - !!omap
    - id: ILEt2rpp
    - name: L-isoleucine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ile__L_c: 1.0
      - ile__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00443
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ILEt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLYtpp
    - name: glycine transport via facillitated diffusion
    - metabolites: !!omap
      - gly_c: -1.0
      - gly_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04382
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GLYtpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_dhps_e
    - name: 2,3-Dihydroxypropane-1-sulfonate exchange
    - metabolites: !!omap
      - dhps_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dhps_e
      - sbo: SBO:0000627
  - !!omap
    - id: MOX
    - name: malate oxidase
    - metabolites: !!omap
      - h2o2_c: 1.0
      - mal__L_c: -1.0
      - o2_c: -1.0
      - oaa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: MOX
      - sbo: SBO:0000176
  - !!omap
    - id: URATEtex
    - name: uric acid transport
    - metabolites: !!omap
      - urate_e: -1.0
      - urate_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_00290 or MNJNJBIH_01035 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: URATEtex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cs1_e
    - name: Exchange of caesium(1+).
    - metabolites: !!omap
      - cs1_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cs1_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___Ecoli_panGEMs__fusa_e
    - name: Fusidic acid exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__fusa_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__fusa_e
      - sbo: SBO:0000627
  - !!omap
    - id: CBL1tonex
    - name: Cob(1)alamin transport via ton system (extermal)
    - metabolites: !!omap
      - cbl1_e: -1.0
      - cbl1_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01392 and MNJNJBIH_03319 and MNJNJBIH_03320)
        and MNJNJBIH_04434
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CBL1tonex
      - sbo: SBO:0000655
  - !!omap
    - id: CBItonex
    - name: Cobinamide transport via ton system (extermal)
    - metabolites: !!omap
      - cbi_e: -1.0
      - cbi_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01392 and MNJNJBIH_03319 and MNJNJBIH_03320)
        and MNJNJBIH_04434
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CBItonex
      - sbo: SBO:0000655
  - !!omap
    - id: ARHGDx
    - name: (R)-alpha-hydroxyglutarate dehydrogenase
    - metabolites: !!omap
      - akg_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - r2hydog_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03189
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: ARHGDx
      - rhea: RHEA:49612
      - sbo: SBO:0000176
  - !!omap
    - id: EX_mepn_e
    - name: Exchange of methylphosphonate(1-).
    - metabolites: !!omap
      - mepn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mepn_e
      - sbo: SBO:0000627
  - !!omap
    - id: PSURItpp
    - name: pseudouridine transport via permease
    - metabolites: !!omap
      - psuri_c: 1.0
      - psuri_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02352
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PSURItpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYSTA
    - name: cysteine transaminase irreversible
    - metabolites: !!omap
      - akg_c: -1.0
      - cys__L_c: -1.0
      - glu__L_c: 1.0
      - mercppyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01034
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: CYSTA
      - rhea: RHEA:17441
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3DCITR5
    - name: Ferric-dicitrate reductase via nadph
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dcit_c: -2.0
      - cit_c: 4.0
      - fe2_c: 2.0
      - h_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03389
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3DCITR5
      - sbo: SBO:0000176
  - !!omap
    - id: CH4t2pp
    - name: Methane Transport(periplasm)
    - metabolites: !!omap
      - ch4_c: -1.0
      - ch4_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CH4t2pp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_cm_e
    - name: Exchange of chloramphenicol.
    - metabolites: !!omap
      - cm_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cm_e
      - sbo: SBO:0000627
  - !!omap
    - id: 4HTHRA
    - name: 4-hydroxy-L-threonine aldolase
    - metabolites: !!omap
      - 4hthr_c: -1.0
      - gcald_c: 1.0
      - gly_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00967
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: 4HTHRA
      - sbo: SBO:0000176
  - !!omap
    - id: EX_novbcn_e
    - name: novobiocin exchange
    - metabolites: !!omap
      - novbcn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_novbcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__I2FE2SR
    - name: ISC [2Fe-2S] regeneration
    - metabolites: !!omap
      - __Ecoli_panGEMs__2fe1s_c: -1.0
      - __Ecoli_panGEMs__iscs_c: 1.0
      - __Ecoli_panGEMs__iscssh_c: -1.0
      - __Ecoli_panGEMs__iscu_2fe2s_c: 1.0
      - __Ecoli_panGEMs__iscu_c: -1.0
      - h_c: 4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02755 and MNJNJBIH_02756
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__I2FE2SR
      - sbo: SBO:0000176
  - !!omap
    - id: GAPP
    - name: Glyceraldehyde-3-phosphate phosphatase
    - metabolites: !!omap
      - g3p_c: -1.0
      - glyald_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01868
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GAPP
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__METGLCURt2pp
    - name: 1-O-methyl-Beta-D-glucuronate transport via proton symport 
        (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__metglcur_c: 1.0
      - __Ecoli_panGEMs__metglcur_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01742
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METGLCURt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__METGLCURtex
    - name: 1-O-methyl-Beta-D-glucuronate via diffusion (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__metglcur_e: -1.0
      - __Ecoli_panGEMs__metglcur_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01514 or MNJNJBIH_00290 or MNJNJBIH_02410 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__METGLCURtex
      - sbo: SBO:0000655
  - !!omap
    - id: INOSTO
    - name: myo-Inositol:oxygen oxidoreductase
    - metabolites: !!omap
      - glcur_c: 1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - inost_c: -1.0
      - o2_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03869
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: INOSTO
      - rhea: RHEA:23696
      - sbo: SBO:0000176
  - !!omap
    - id: HPYRP
    - name: 3-phosphohydroxypyruvate phosphatase
    - metabolites: !!omap
      - 3php_c: -1.0
      - h2o_c: -1.0
      - hpyr_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01960
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HPYRP
      - rhea: RHEA:35543
      - sbo: SBO:0000176
  - !!omap
    - id: PSURIK
    - name: pseudouridine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - psd5p_c: 1.0
      - psuri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02354
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: PSURIK
      - rhea: RHEA:22448
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FMNt
    - name: FMN transporter, periplasm
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: -1.0
      - __Ecoli_panGEMs__fmn_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02167
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FMNt
      - sbo: SBO:0000655
  - !!omap
    - id: AI2tex
    - name: Ai2 transport, outer membrane
    - metabolites: !!omap
      - mththf_e: -1.0
      - mththf_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_00290 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: AI2tex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__PAI2T
    - name: 3-hydroxy-2,4-pentadione 5-phosphate thiolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__dhptdd_c: -1.0
      - accoa_c: 1.0
      - coa_c: -1.0
      - dhap_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01669
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PAI2T
      - sbo: SBO:0000176
  - !!omap
    - id: CUt2pp
    - name: copper transport out via permease (no H+)
    - metabolites: !!omap
      - cu_c: -1.0
      - cu_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03636 or MNJNJBIH_00513 or MNJNJBIH_01498 or 
        MNJNJBIH_00611 or MNJNJBIH_04652 or MNJNJBIH_03202 or MNJNJBIH_00890
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CUt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: Ftex
    - name: Fluoride transport via diffusion
    - metabolites: !!omap
      - f_e: 1.0
      - f_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01035 or MNJNJBIH_02410 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: Ftex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__APG3PAT120
    - name: Acyl-phosphate:glycerol-3-phosphate acyltransferase (C12:0)
    - metabolites: !!omap
      - 1ddecg3p_c: 1.0
      - __Ecoli_panGEMs__ddcap_c: -1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03376
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APG3PAT120
      - sbo: SBO:0000176
  - !!omap
    - id: CYSItex
    - name: L cystine transport via diffusion extracellular to periplasm
    - metabolites: !!omap
      - cysi__L_e: -1.0
      - cysi__L_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_00290 or MNJNJBIH_01514 or 
        MNJNJBIH_02410
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: CYSItex
      - sbo: SBO:0000655
  - !!omap
    - id: SERtpp
    - name: L-serine export via facilitated transport
    - metabolites: !!omap
      - ser__L_c: -1.0
      - ser__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01687
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SERtpp
      - sbo: SBO:0000655
  - !!omap
    - id: QUINDHyi
    - name: Quinate dehydrogenase (NADP)
    - metabolites: !!omap
      - 3dhq_c: 1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - quin_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01831
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: QUINDHyi:2
      - rhea: RHEA:18425
      - sbo: SBO:0000176
  - !!omap
    - id: DHCURR
    - name: NADPH-dependent dihydrocurcumin reductase
    - metabolites: !!omap
      - dhcur_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - thcur_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01597
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DHCURR
      - rhea: RHEA:34811
      - sbo: SBO:0000176
  - !!omap
    - id: RHMND
    - name: L-rhamnonate dehydratase
    - metabolites: !!omap
      - h2o_c: 1.0
      - lkdr_c: 1.0
      - rhmn_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02443
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RHMND
      - rhea: RHEA:23080
      - sbo: SBO:0000176
  - !!omap
    - id: 3HBZCT
    - name: 3-hydroxybenzoyl-CoA thioesterase
    - metabolites: !!omap
      - 3hbz_c: 1.0
      - 3hbzcoa_c: -1.0
      - coa_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00643
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: 3HBZCT:2
      - sbo: SBO:0000176
  - !!omap
    - id: CXSAMS
    - name: carboxy-S-adenosyl-L-methionine synthase
    - metabolites: !!omap
      - amet_c: -1.0
      - cxsam_c: 1.0
      - h2o_c: 1.0
      - phpyr_c: 1.0
      - pphn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02023
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: CXSAMS
      - sbo: SBO:0000176
  - !!omap
    - id: EX_2dglc_e
    - name: Exchange of 2-deoxy-D-glucopyranose.
    - metabolites: !!omap
      - 2dglc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_2dglc_e
      - sbo: SBO:0000627
  - !!omap
    - id: THRt2rpp
    - name: L-threonine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - thr__L_c: 1.0
      - thr__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03446
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THRt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: SERt2rpp
    - name: L-serine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - ser__L_c: 1.0
      - ser__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03051 or MNJNJBIH_03446
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SERt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: PNSPA
    - name: Purine Nucleoside Phorphoramidase
    - metabolites: !!omap
      - gmp_c: 1.0
      - gmplys_c: -1.0
      - h2o_c: -1.0
      - nalme_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01240
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: PNSPA
      - rhea: RHEA:33395
      - sbo: SBO:0000176
  - !!omap
    - id: 4HTHRK
    - name: 4-Hydroxy-L-threonine kinase
    - metabolites: !!omap
      - 4hthr_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - phthr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00014
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: 4HTHRK
      - rhea: RHEA:28787
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOAD1fr:2
    - name: Acyl-CoA dehydrogenase (butanoyl-CoA)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - b2coa_c: 1.0
      - btcoa_c: -1.0
      - fadh2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00267
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOAD1fr
      - sbo: SBO:0000176
  - !!omap
    - id: EX_sq_e
    - name: Exchange of 6-sulfo-alpha-D-quinovose(1-).
    - metabolites: !!omap
      - sq_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sq_e
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__APH120
    - name: Acylphosphatase (C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ddcap_c: -1.0
      - ddca_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01083
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__APH120
      - sbo: SBO:0000176
  - !!omap
    - id: URATEtpp
    - name: uric acid transporter
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - urate_c: 1.0
      - urate_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03160
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: URATEtpp
      - sbo: SBO:0000655
  - !!omap
    - id: CS1tex
    - name: cesium transport via diffusion
    - metabolites: !!omap
      - cs1_e: -1.0
      - cs1_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_02410 or MNJNJBIH_00290 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: CS1tex
      - sbo: SBO:0000655
  - !!omap
    - id: ADOCBLtonex
    - name: Adenosylcobalimin transport via ton system (extermal)
    - metabolites: !!omap
      - adocbl_e: -1.0
      - adocbl_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_01392 and MNJNJBIH_03319 and MNJNJBIH_03320)
        and MNJNJBIH_04434
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: ADOCBLtonex
      - sbo: SBO:0000655
  - !!omap
    - id: URAtpp
    - name: uracil export via facillitated diffusion (periplasm)
    - metabolites: !!omap
      - ura_c: -1.0
      - ura_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: URAtpp
      - sbo: SBO:0000655
  - !!omap
    - id: ASPtpp
    - name: L-aspartate uptake via facillitated diffusion
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01339
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ASPtpp
      - sbo: SBO:0000655
  - !!omap
    - id: FUMt1pp
    - name: fumarate transport via diffusion in (periplasm)
    - metabolites: !!omap
      - fum_c: 1.0
      - fum_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01339
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FUMt1pp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCCt1pp
    - name: succinate transport via diffusion in (periplasm)
    - metabolites: !!omap
      - succ_c: 1.0
      - succ_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01339
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCCt1pp
      - sbo: SBO:0000655
  - !!omap
    - id: QUINDH
    - name: Quinate dehydrogenase
    - metabolites: !!omap
      - 3dhq_c: 1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - quin_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01831
    - subsystem: Tyrosine, Tryptophan, and Phenylalanine Metabolism
    - annotation: !!omap
      - biggr: QUINDH:2
      - rhea: RHEA:22364
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PETNT181pp
    - name: Phosphoethanolamine transferase (c-C16:1)
    - metabolites: !!omap
      - 12dgr181_p: 1.0
      - __Ecoli_panGEMs__enlipa_p: 1.0
      - __Ecoli_panGEMs__pe181_p: -1.0
      - lipa_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03943
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PETNT181pp
      - sbo: SBO:0000176
  - !!omap
    - id: LCARSyi
    - name: lacaldehyde reductase (S-propane-1,2-diol forming)
    - metabolites: !!omap
      - 12ppd__S_c: 1.0
      - h_c: -1.0
      - lald__L_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00355
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LCARSyi
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MOCDS
    - name: Molybdopterin cytidine dinucleotide synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__moco_c: -1.0
      - __Ecoli_panGEMs__mococdp_c: 1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03150
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MOCDS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BIOMASS_Ec_iML1515_core_75p37M
    - name: Biomass reaction
    - metabolites: !!omap
      - 10fthf_c: -0.000223
      - 2fe2s_c: -2.6e-05
      - 2ohph_c: -0.000223
      - 4fe4s_c: -0.00026
      - __Ecoli_panGEMs__fad_c: -0.000223
      - __Ecoli_panGEMs__murein5px4p_p: -0.013894
      - __Ecoli_panGEMs__pe161_p: -0.075214
      - adp_c: 75.37723
      - ala__L_c: -0.513689
      - amet_c: -0.000223
      - arg__L_c: -0.295792
      - asn__L_c: -0.241055
      - asp__L_c: -0.241055
      - atp_c: -75.55223
      - btn_c: -2e-06
      - ca2_c: -0.005205
      - cl_c: -0.005205
      - coa_c: -0.000576
      - cobalt2_c: -2.5e-05
      - ctp_c: -0.133508
      - cu2_c: -0.000709
      - cys__L_c: -0.09158
      - datp_c: -0.026166
      - dctp_c: -0.027017
      - dgtp_c: -0.027017
      - dttp_c: -0.026166
      - fe2_c: -0.006715
      - fe3_c: -0.007808
      - gln__L_c: -0.26316
      - glu__L_c: -0.26316
      - gly_c: -0.612638
      - gtp_c: -0.215096
      - h2o_c: -70.028756
      - h_c: 75.37723
      - his__L_c: -0.094738
      - ile__L_c: -0.290529
      - k_c: -0.195193
      - kdo2lipid4_e: -0.019456
      - leu__L_c: -0.450531
      - lys__L_c: -0.343161
      - met__L_c: -0.153686
      - mg2_c: -0.008675
      - mlthf_c: -0.000223
      - mn2_c: -0.000691
      - mobd_c: -7e-06
      - nad_c: -0.001831
      - nadp_c: -0.000447
      - nh4_c: -0.013013
      - ni2_c: -0.000323
      - pe160_p: -0.063814
      - phe__L_c: -0.185265
      - pheme_c: -0.000223
      - pi_c: 75.37323
      - ppi_c: 0.773903
      - pro__L_c: -0.221055
      - pydx5p_c: -0.000223
      - ribflv_c: -0.000223
      - ser__L_c: -0.215792
      - sheme_c: -0.000223
      - so4_c: -0.004338
      - succoa_c: -9.8e-05
      - thf_c: -0.000223
      - thmpp_c: -0.000223
      - thr__L_c: -0.253687
      - trp__L_c: -0.056843
      - tyr__L_c: -0.137896
      - udcpdp_c: -5.5e-05
      - utp_c: -0.144104
      - val__L_c: -0.423162
      - zn2_c: -0.000341
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - objective_coefficient: 1.0
    - subsystem: Biomass and maintenance functions
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BIOMASS_Ec_iML1515_core_75p37M
      - sbo: SBO:0000629
  - !!omap
    - id: __Ecoli_panGEMs__BIOMASS_Ec_iML1515_WT_75p37M
    - name: Biomass reaction
    - metabolites: !!omap
      - 10fthf_c: -0.000223
      - 2dmmql8_c: -0.000223
      - 2fe2s_c: -2.5e-05
      - 4fe4s_c: -0.000248
      - __Ecoli_panGEMs__5mthf_c: -0.000223
      - __Ecoli_panGEMs__clpn160_p: -0.002944
      - __Ecoli_panGEMs__clpn161_p: -0.00229
      - __Ecoli_panGEMs__clpn181_p: -0.00118
      - __Ecoli_panGEMs__colipa_e: -0.008151
      - __Ecoli_panGEMs__fad_c: -0.000223
      - __Ecoli_panGEMs__glycogen_c: -0.154187
      - __Ecoli_panGEMs__lipopb_c: -3e-06
      - __Ecoli_panGEMs__mococdp_c: -7e-06
      - __Ecoli_panGEMs__mocogdp_c: -7e-06
      - __Ecoli_panGEMs__murein3p3p_p: -0.001345
      - __Ecoli_panGEMs__murein3px4p_p: -0.000605
      - __Ecoli_panGEMs__murein4p4p_p: -0.005381
      - __Ecoli_panGEMs__murein4px4p_p: -0.005448
      - __Ecoli_panGEMs__murein4px4px4p_p: -0.000673
      - __Ecoli_panGEMs__pe161_p: -0.03435
      - __Ecoli_panGEMs__pe181_p: -0.017704
      - __Ecoli_panGEMs__pg160_p: -0.010599
      - __Ecoli_panGEMs__pg161_p: -0.008244
      - __Ecoli_panGEMs__pg181_p: -0.004249
      - accoa_c: -0.000279
      - adocbl_c: -0.000223
      - adp_c: 75.37723
      - ala__L_c: -0.499149
      - amet_c: -0.000223
      - arg__L_c: -0.28742
      - asn__L_c: -0.234232
      - asp__L_c: -0.234232
      - atp_c: -75.55223
      - btn_c: -2e-06
      - ca2_c: -0.004952
      - chor_c: -0.000223
      - cl_c: -0.004952
      - coa_c: -0.000168
      - cobalt2_c: -2.4e-05
      - ctp_c: -0.129799
      - cu2_c: -0.000674
      - cys__L_c: -0.088988
      - datp_c: -0.024805
      - dctp_c: -0.025612
      - dgtp_c: -0.025612
      - dttp_c: -0.024805
      - enter_c: -0.000223
      - fe2_c: -0.006388
      - fe3_c: -0.007428
      - gln__L_c: -0.255712
      - glu__L_c: -0.255712
      - gly_c: -0.595297
      - gthrd_c: -0.000223
      - gtp_c: -0.209121
      - h2o_c: -70.028756
      - h_c: 75.37723
      - hemeO_c: -0.000223
      - his__L_c: -0.092056
      - ile__L_c: -0.282306
      - k_c: -0.18569
      - leu__L_c: -0.437778
      - lys__L_c: -0.333448
      - malcoa_c: -3.1e-05
      - met__L_c: -0.149336
      - mg2_c: -0.008253
      - mlthf_c: -0.000223
      - mn2_c: -0.000658
      - mobd_c: -7e-06
      - mql8_c: -0.000223
      - nad_c: -0.001787
      - nadh_c: -4.5e-05
      - nadp_c: -0.000112
      - nadph_c: -0.000335
      - nh4_c: -0.012379
      - ni2_c: -0.000307
      - pe160_p: -0.044164
      - phe__L_c: -0.180021
      - pheme_c: -0.000223
      - pi_c: 75.37323
      - ppi_c: 0.749831
      - pro__L_c: -0.214798
      - ptrc_c: -0.03327
      - pydx5p_c: -0.000223
      - q8h2_c: -0.000223
      - ribflv_c: -0.000223
      - ser__L_c: -0.209684
      - sheme_c: -0.000223
      - so4_c: -0.004126
      - spmd_c: -0.006744
      - succoa_c: -9.8e-05
      - thf_c: -0.000223
      - thmpp_c: -0.000223
      - thr__L_c: -0.246506
      - trp__L_c: -0.055234
      - tyr__L_c: -0.133993
      - udcpdp_c: -5.5e-05
      - utp_c: -0.140101
      - val__L_c: -0.411184
      - zn2_c: -0.000324
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Biomass and maintenance functions
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BIOMASS_Ec_iML1515_WT_75p37M
      - sbo: SBO:0000629
  - !!omap
    - id: __Ecoli_panGEMs__FUSAtex
    - name: Fusidic acid transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fusa_e: -1.0
      - __Ecoli_panGEMs__fusa_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01035 or MNJNJBIH_01514 or 
        MNJNJBIH_00290
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FUSAtex
      - sbo: SBO:0000655
  - !!omap
    - id: MEPNtex
    - name: methylphosphonic acid transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - mepn_e: -1.0
      - mepn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01035 or MNJNJBIH_00290 or MNJNJBIH_02410 or 
        MNJNJBIH_01514
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: MEPNtex
      - sbo: SBO:0000655
  - !!omap
    - id: UDPGPT
    - name: undecaprenyl-phosphate glucose phosphotransferase
    - metabolites: !!omap
      - udcpgl_c: 1.0
      - udcpp_c: -1.0
      - udpg_c: -1.0
      - ump_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02234
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UDPGPT
      - rhea: RHEA:28126
      - sbo: SBO:0000176
  - !!omap
    - id: OMMBLHXy
    - name: 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NADPHl)
    - metabolites: !!omap
      - 2omhmbl_c: 1.0
      - 2ommbl_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00714
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OMMBLHXy
      - sbo: SBO:0000176
  - !!omap
    - id: OPHHXy
    - name: 2-Octaprenylphenol hydroxylase (NADPH)
    - metabolites: !!omap
      - 2ohph_c: 1.0
      - 2oph_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03181
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OPHHXy
      - rhea: RHEA:27790
      - sbo: SBO:0000176
  - !!omap
    - id: F1PP
    - name: D-fructose 1-phosphate phosphatase
    - metabolites: !!omap
      - f1p_c: -1.0
      - fru_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02927 or MNJNJBIH_00909 or MNJNJBIH_04126
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: F1PP
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACP1p
    - name: Acid phosphatase (FMN)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
      - ribflv_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00423
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACP1p
      - sbo: SBO:0000176
  - !!omap
    - id: EX_4abzglu_e
    - name: Exchange of N-(4-aminobenzoyl)-L-glutamate.
    - metabolites: !!omap
      - 4abzglu_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_4abzglu_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_rfamp_e
    - name: Exchange of rifampicin zwitterion.
    - metabolites: !!omap
      - rfamp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_rfamp_e
      - sbo: SBO:0000627
  - !!omap
    - id: 4ABZGLUtex
    - name: p-aminobenzoyl glutamate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - 4abzglu_e: -1.0
      - 4abzglu_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00290 or MNJNJBIH_01514 or MNJNJBIH_02410 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: 4ABZGLUtex
      - sbo: SBO:0000655
  - !!omap
    - id: QUIN2tex
    - name: Quinate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - quin_e: -1.0
      - quin_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02410 or MNJNJBIH_01514 or MNJNJBIH_00290 or 
        MNJNJBIH_01035
    - subsystem: Transport, Outer Membrane Porin
    - annotation: !!omap
      - biggr: QUIN2tex:2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__2HPTCOAT
    - name: 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase
    - metabolites: !!omap
      - __Ecoli_panGEMs__2hptcl_c: 1.0
      - __Ecoli_panGEMs__2hptcoa_c: -1.0
      - coa_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01542
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__2HPTCOAT
      - sbo: SBO:0000176
  - !!omap
    - id: EX___Ecoli_panGEMs__metglcur_e
    - name: 1-O-methyl-Beta-D-glucuronate exchange
    - metabolites: !!omap
      - __Ecoli_panGEMs__metglcur_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___Ecoli_panGEMs__metglcur_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_quin_e
    - name: Quinate exchange
    - metabolites: !!omap
      - quin_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_quin_e
      - sbo: SBO:0000627
  - !!omap
    - id: MC6PH
    - name: monoacetylchitobiose-6-phosphate hydrolase
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - gam_c: 1.0
      - h2o_c: -1.0
      - mchtbs6p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01876
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MC6PH
      - rhea: RHEA:35087
      - sbo: SBO:0000176
  - !!omap
    - id: FORCT
    - name: Formyl-CoA Transferase
    - metabolites: !!omap
      - for_c: 1.0
      - forcoa_c: -1.0
      - oxa_c: -1.0
      - oxalcoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02565
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: FORCT
      - rhea: RHEA:16545
      - sbo: SBO:0000176
  - !!omap
    - id: VALt2rpp
    - name: L-valine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - val__L_c: 1.0
      - val__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00443
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: VALt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: VALt3pp
    - name: L-valine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - val__L_c: -1.0
      - val__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_02919 and MNJNJBIH_02918) or MNJNJBIH_04631
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: VALt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: MN2tpp:2
    - name: manganese transport in via permease (no H+)
    - metabolites: !!omap
      - mn2_c: -1.0
      - mn2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01970
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MN2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: EX_3hpp_e
    - name: Exchange of 3-hydroxypropionate.
    - metabolites: !!omap
      - 3hpp_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_3hpp_e
      - sbo: SBO:0000627
  - !!omap
    - id: HADPCOADH3
    - name: 3-hydroxyadipyl-CoA dehydrogenase (NAD+)
    - metabolites: !!omap
      - 3hadpcoa_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - oxadpcoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01536
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HADPCOADH3
      - rhea: RHEA:34851
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16A4COLIPAabctex
    - name: O16 antigen (x4) core oligosaccharide lipid A transport via ABC 
        system (periplasm to extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__o16a4colipa_e: 1.0
      - __Ecoli_panGEMs__o16a4colipa_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16A4COLIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__COLIPAabctex
    - name: Core oligosaccharide lipid A transport via ABC system (periplasm to 
        extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_e: 1.0
      - __Ecoli_panGEMs__colipa_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00694 and MNJNJBIH_03545 and MNJNJBIH_04775 
        and MNJNJBIH_03546 and MNJNJBIH_03544 and MNJNJBIH_00080 and 
        MNJNJBIH_04774
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__COLIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__ENLIPAabctex
    - name: Phosphoethanolamine lipid A transport via ABC system (periplasm to 
        extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__enlipa_e: 1.0
      - __Ecoli_panGEMs__enlipa_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04775 and MNJNJBIH_04774 and MNJNJBIH_03544 
        and MNJNJBIH_03546 and MNJNJBIH_03545 and MNJNJBIH_00080 and 
        MNJNJBIH_00694
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ENLIPAabctex
      - sbo: SBO:0000655
  - !!omap
    - id: EX_mththf_c
    - name: Exchange of (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol.
    - metabolites: !!omap
      - mththf_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular demand
    - annotation: !!omap
      - biggr: EX_mththf_c
      - sbo: SBO:0000627
  - !!omap
    - id: __Ecoli_panGEMs__BMOGDS1
    - name: Bis-molybdopterin guanine dinucleotide synthase (single GDP)
    - metabolites: !!omap
      - __Ecoli_panGEMs__bmoco1gdp_c: 1.0
      - __Ecoli_panGEMs__bmoco_c: -1.0
      - gtp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04295 or (MNJNJBIH_04295 and MNJNJBIH_04294)
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BMOGDS1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MPTS
    - name: Molybdopterin synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpmp_c: -1.0
      - __Ecoli_panGEMs__moadcoo_c: 2.0
      - __Ecoli_panGEMs__moadcosh_c: -2.0
      - __Ecoli_panGEMs__mpt_c: 1.0
      - cu2_c: -1.0
      - h_c: 5.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00856 and MNJNJBIH_00855
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MPTS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BMOGDS2
    - name: Bis-molybdopterin guanine dinucleotide synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__bmoco1gdp_c: -1.0
      - __Ecoli_panGEMs__bmocogdp_c: 1.0
      - gtp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (MNJNJBIH_04295 and MNJNJBIH_04294) or MNJNJBIH_04295
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BMOGDS2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__OCTNLL
    - name: Octanoate non-lipoylated apo domain ligase
    - metabolites: !!omap
      - __Ecoli_panGEMs__octapb_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: -1.0
      - octa_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04862
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__OCTNLL
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R08991
    - name: cyclic bis(3'->5')diguanylate 3'-guanylylhydrolase
    - metabolites: !!omap
      - 5pg35pg_c: 1
      - __Ecoli_panGEMs__C16463_c: -1
      - h2o_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ((((((MNJNJBIH_01962 and MNJNJBIH_00925) and 
        MNJNJBIH_02365) and MNJNJBIH_02594) and MNJNJBIH_03919) and 
        MNJNJBIH_04554) and MNJNJBIH_00504) and MNJNJBIH_01291
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R08991
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R00601
    - name: S-adenosyl-L-methionine:tRNA 5-(aminomethyl)-2-thiouridylate 
        N-methyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C04728_c: 1
      - __Ecoli_panGEMs__C11478_c: -1
      - ahcys_c: 1
      - amet_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02528
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R00601
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R10002
    - name: 6-carboxy-5,6,7,8-tetrahydropterin ammonia-lyase
    - metabolites: !!omap
      - __Ecoli_panGEMs__cph4_c: -1
      - __Ecoli_panGEMs__nh4_c: 1
      - cdg_c: 1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03031
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R10002
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R00577
    - name: acyl-CoA:L-glutamine N-acyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C02716_c: 1
      - __Ecoli_panGEMs__acoa_c: -1
      - coa_c: 1
      - gln__L_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03105
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R00577
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R12635
    - name: N4-acetylcytidine amidohydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C22293_c: -1
      - ac_c: 1
      - cytd_c: 1
      - h2o_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03175
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R12635
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R10463
    - name: ATP:L-threonyl,HCO3- adenylyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C20641_c: 1
      - __Ecoli_panGEMs__h2co3_c: -1
      - atp_c: -1
      - h2o_c: 1
      - h_c: -1
      - ppi_c: 1
      - thr__L_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03628
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R10463
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R04273
    - name: peptidylproline cis-trans-isomerase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C03633_c: 1
      - __Ecoli_panGEMs__C03798_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ((((MNJNJBIH_03695 and MNJNJBIH_03715) and 
        MNJNJBIH_04203) and MNJNJBIH_04714) and MNJNJBIH_00044) and 
        MNJNJBIH_00582
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R04273
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CCP
    - name: ferrocytochrome-c:hydrogen-peroxide oxidoreductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ficytc_c: 2.0
      - __Ecoli_panGEMs__focytcc553_c: -2.0
      - __Ecoli_panGEMs__h2o2_c: -1
      - h2o_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03905
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CCP
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R00693
    - name: acetyl-CoA:L-phenylalanine N-acetyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C03519_c: 1
      - accoa_c: -1
      - coa_c: 1
      - phe__L_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03809
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R00693
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R08224
    - name: selenophosphate:O-phospho-L-seryl-tRNASec selenium transferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C16638_c: -1
      - __Ecoli_panGEMs__sectrna_c: 1
      - __Ecoli_panGEMs__selnp_c: -1
      - h2o_c: -1
      - pi_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03997
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R08224
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R11202
    - name: '[Wnt]-O-(9Z)-hexadec-9-enoyl-L-serine acylhydrolase'
    - metabolites: !!omap
      - __Ecoli_panGEMs__C08362_c: 1
      - __Ecoli_panGEMs__C21171_c: -1
      - __Ecoli_panGEMs__C21172_c: 1
      - h2o_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04695 and MNJNJBIH_00739
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R11202
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R06264
    - name: dolichyl 
        beta-D-glucosyl-phosphate:alpha-D-Glc-(1->3)-alpha-D-Glc-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->6)]-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-alpha-D-GlcNAc-diphosphodolichol
        alpha-1,2-glucosyltransferase (configuration-retaining)
    - metabolites: !!omap
      - __Ecoli_panGEMs__G00008_c: 1
      - __Ecoli_panGEMs__G10599_c: -1
      - __Ecoli_panGEMs__G10618_c: -1
      - __Ecoli_panGEMs__G10622_c: 1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00404
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R06264
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R02030
    - name: CDP-diacylglycerol:phosphatidylglycerol 
        diacylglycerolphosphotransferase (CMP-forming)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cdpdag_cho_c: -1
      - __Ecoli_panGEMs__clpn_cho_c: 1
      - __Ecoli_panGEMs__pglyc_cho_c: -1
      - cmp_c: 1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01178
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R02030
      - sbo: SBO:0000176
  - !!omap
    - id: GAPD:2
    - name: glyceraldehyde-3-phosphate dehydrogenase
    - metabolites: !!omap
      - 13dpg_c: 1
      - g3p_c: -1
      - h_c: 1
      - nad_c: -1
      - nadh_c: 1
      - pi_c: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01561
    - annotation: !!omap
      - biggr: GAPD
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GGCLUT2
    - name: glutathione gamma-glutamyl cyclotransferase (5-oxo-L-proline 
        producing)
    - metabolites: !!omap
      - __Ecoli_panGEMs__5oxpro_c: 1
      - cgly_c: 1
      - gthrd_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01354
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GGCLUT2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R05790
    - name: 2-O-(alpha-D-mannosyl)-3-phosphoglycerate phosphohydrolase
    - metabolites: !!omap
      - __Ecoli_panGEMs__C11516_c: -1
      - __Ecoli_panGEMs__manglyc_c: 1
      - h2o_c: -1
      - pi_c: 1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_02108
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R05790
      - sbo: SBO:0000176
  - !!omap
    - id: PYDXOR
    - name: Pyridoxine:NADP+4-oxidoreductase
    - metabolites: !!omap
      - h_c: 1
      - nadp_c: -1
      - nadph_c: 1
      - pydx_c: 1
      - pydxn_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01549
    - annotation: !!omap
      - biggr: PYDXOR
      - rhea: RHEA:16129
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__RBK_Dr
    - name: ATP:D-ribulose 5-phosphotransferase
    - metabolites: !!omap
      - adp_c: 1
      - atp_c: -1
      - rbl__D_c: -1
      - ru5p__D_c: 1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00090
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RBK_Dr
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__R11593
    - name: (R)-2-hydroxyglutarate:pyruvate oxidoreductase [(R)-lactate-forming]
    - metabolites: !!omap
      - __Ecoli_panGEMs__C01087_c: -1
      - akg_c: 1
      - lac__D_c: 1
      - pyr_c: -1
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00968
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__R11593
      - sbo: SBO:0000176
  - !!omap
    - id: AOBUTDs
    - name: L-2-amino-3-oxobutanoate decarboxylation (spontaneous)
    - metabolites: !!omap
      - 2aobut_c: -1.0
      - aact_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: AOBUTDs
      - rhea: RHEA:25653
      - sbo: SBO:0000176
  - !!omap
    - id: G5SADs
    - name: L-glutamate 5-semialdehyde dehydratase (spontaneous)
    - metabolites: !!omap
      - glusemald_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - pyr5carb_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: G5SADs
      - rhea: RHEA:28234
      - sbo: SBO:0000176
  - !!omap
    - id: O2tpp
    - name: o2 transport via diffusion (periplasm)
    - metabolites: !!omap
      - o2_c: 1.0
      - o2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: O2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: CO2tpp
    - name: CO2 transporter via diffusion (periplasm)
    - metabolites: !!omap
      - co2_c: 1.0
      - co2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CO2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: ACALDtpp
    - name: acetaldehyde reversible transport (periplasm)
    - metabolites: !!omap
      - acald_c: 1.0
      - acald_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ACALDtpp
      - sbo: SBO:0000655
  - !!omap
    - id: DATPHs
    - name: dATP amine hydrolysis (spontaneous)
    - metabolites: !!omap
      - datp_c: -1.0
      - ditp_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DATPHs
      - sbo: SBO:0000176
  - !!omap
    - id: NOtpp
    - name: NO transport (diffusion)
    - metabolites: !!omap
      - no_c: 1.0
      - no_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NOtpp
      - sbo: SBO:0000655
  - !!omap
    - id: N2Otpp
    - name: nitrious oxide transport (diffusion)
    - metabolites: !!omap
      - n2o_c: 1.0
      - n2o_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: N2Otpp
      - sbo: SBO:0000655
  - !!omap
    - id: FALDtpp
    - name: formaldehyde transport via diffusion (periplasm)
    - metabolites: !!omap
      - fald_c: 1.0
      - fald_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FALDtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FECRMexs
    - name: Ferrichrome Fe(III)-loading reaction (spontaneous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fecrm_e: 1.0
      - __Ecoli_panGEMs__fecrm_un_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FECRMexs
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ARBTNexs
    - name: Aerobactin Fe-loading reaction (spontaneous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__arbtn_fe3_e: 1.0
      - arbtn_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ARBTNexs
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEOXAMexs
    - name: Ferroxamine Fe3-loading reaction (spontaneous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feoxam_e: 1.0
      - __Ecoli_panGEMs__feoxam_un_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEOXAMexs
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERexs
    - name: Enterobactin Fe(III) binding (spontaneous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_e: 1.0
      - enter_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERexs
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FE3HOXexs
    - name: Fe(III) hydroxamate Fe-loading reaction (spontaneaous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3hox_e: 1.0
      - __Ecoli_panGEMs__fe3hox_un_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3HOXexs
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__CPGNexs
    - name: Coprogen Fe-loading reaction (spontaneaous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__cpgn_e: 1.0
      - __Ecoli_panGEMs__cpgn_un_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__CPGNexs
      - sbo: SBO:0000176
  - !!omap
    - id: ATPHs
    - name: ATP amine hydrolysis (spontaneous)
    - metabolites: !!omap
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - itp_c: 1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: ATPHs
      - rhea: RHEA:13037
      - sbo: SBO:0000176
  - !!omap
    - id: GTPHs
    - name: GTP amine hydrolysis (spontaneous)
    - metabolites: !!omap
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
      - xtp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: GTPHs
      - sbo: SBO:0000176
  - !!omap
    - id: NH4tpp
    - name: ammonia reversible transport (periplasm)
    - metabolites: !!omap
      - nh4_c: 1.0
      - nh4_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001 or b0451
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NH4tpp
      - sbo: SBO:0000655
  - !!omap
    - id: METOX1s
    - name: methionine oxidation (spontaneous)
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 1.0
      - met__L_c: -1.0
      - metsox_S__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: METOX1s
      - sbo: SBO:0000176
  - !!omap
    - id: METOX2s
    - name: methionine oxidation 2 (spontaneous)
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 1.0
      - met__L_c: -1.0
      - metsox_R__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: METOX2s
      - sbo: SBO:0000176
  - !!omap
    - id: FALGTHLs
    - name: formaldehyde glutathione ligase (spontaneous)
    - metabolites: !!omap
      - fald_c: -1.0
      - gthrd_c: -1.0
      - hmgth_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: FALGTHLs
      - rhea: RHEA:22488
      - sbo: SBO:0000176
  - !!omap
    - id: OMCDC
    - name: 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation
    - metabolites: !!omap
      - 3c4mop_c: -1.0
      - 4mop_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: OMCDC
      - rhea: RHEA:25078
      - sbo: SBO:0000176
  - !!omap
    - id: H2St1pp
    - name: h2s transport (periplasm)
    - metabolites: !!omap
      - h2s_c: -1.0
      - h2s_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: H2St1pp:2
      - sbo: SBO:0000655
  - !!omap
    - id: SO2tpp
    - name: SO2 transport via diffusion (periplasm)
    - metabolites: !!omap
      - so2_c: 1.0
      - so2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SO2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: H2tpp
    - name: hydrogen transport diffusion (periplasm)
    - metabolites: !!omap
      - h2_c: 1.0
      - h2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: H2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: ACONIs
    - name: aconitate isomerase (spontaneous)
    - metabolites: !!omap
      - acon_T_c: -1.0
      - acon_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Unassigned
    - annotation: !!omap
      - biggr: ACONIs
      - rhea: RHEA:17265
      - sbo: SBO:0000176
  - !!omap
    - id: MTHTHFSs
    - name: (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis 
        (spontaneous)
    - metabolites: !!omap
      - h2o_c: -1.0
      - mdhdhf_c: -1.0
      - mththf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: MTHTHFSs
      - rhea: RHEA:35159
      - sbo: SBO:0000176
  - !!omap
    - id: RFAMPtex
    - name: Rifampin transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - rfamp_e: -1.0
      - rfamp_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: RFAMPtex
      - sbo: SBO:0000655
  - !!omap
    - id: MEOHtrpp
    - name: Methanol reversible transport via diffusion (periplasm)
    - metabolites: !!omap
      - meoh_c: 1.0
      - meoh_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MEOHtrpp
      - sbo: SBO:0000655
  - !!omap
    - id: ETOHtrpp
    - name: ethanol reversible transport via diffusion (periplasm)
    - metabolites: !!omap
      - etoh_c: 1.0
      - etoh_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ETOHtrpp
      - sbo: SBO:0000655
  - !!omap
    - id: CBMD
    - name: carbamate deaminase
    - metabolites: !!omap
      - cbm_c: -1.0
      - co2_c: 1.0
      - h_c: -2.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: CBMD
      - rhea: RHEA:15649
      - sbo: SBO:0000176
  - !!omap
    - id: DMSOtpp
    - name: Dimethyl sulfoxide transport via diffusion (periplasm)
    - metabolites: !!omap
      - dmso_c: 1.0
      - dmso_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: DMSOtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3DCITexs
    - name: Dicitrate Fe(III) binding (spontaneous)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dcit_e: 1.0
      - cit_e: -2.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3DCITexs
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FESD1s
    - name: Iron-sulfur cluster damage (peroxide, spontaneous)
    - metabolites: !!omap
      - 4fe4s_c: -2.0
      - __Ecoli_panGEMs__3fe4s_c: 2.0
      - fe3_c: 2.0
      - h2o2_c: -1.0
      - h2o_c: 2.0
      - h_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FESD1s
      - sbo: SBO:0000176
  - !!omap
    - id: DHGLYH
    - name: Dehydroglycine Hydratase
    - metabolites: !!omap
      - dhgly_c: -1.0
      - glx_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Glyoxylate Metabolism
    - annotation: !!omap
      - biggr: DHGLYH:2
      - rhea: RHEA:33347
      - sbo: SBO:0000176
  - !!omap
    - id: NOVBCNtex
    - name: Novobiocin transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - novbcn_e: -1.0
      - novbcn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: NOVBCNtex:2
      - sbo: SBO:0000655
  - !!omap
    - id: DHPTDCs2
    - name: 4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)
    - metabolites: !!omap
      - dhptd_c: -1.0
      - mdhdhf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: DHPTDCs2
      - rhea: RHEA:35155
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FESD2s
    - name: Iron-sulfur cluster damage (nitrous oxide, spontaneous)
    - metabolites: !!omap
      - 4fe4s_c: -2.0
      - __Ecoli_panGEMs__3fe4s_c: 2.0
      - fe3_c: 2.0
      - h2o_c: 1.0
      - h_c: -2.0
      - n2o_c: 1.0
      - no_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: s0001
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FESD2s
      - sbo: SBO:0000176
  - !!omap
    - id: PTRCTA
    - name: Putrescine Transaminase
    - metabolites: !!omap
      - 4abutn_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - ptrc_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: PTRCTA
      - rhea: RHEA:23816
      - sbo: SBO:0000176
  - !!omap
    - id: ACS
    - name: acetyl-CoA synthetase
    - metabolites: !!omap
      - ac_c: -1.0
      - accoa_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: ACS
      - rhea: RHEA:23176
      - sbo: SBO:0000176
  - !!omap
    - id: ALAR
    - name: alanine racemase
    - metabolites: !!omap
      - ala__D_c: 1.0
      - ala__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: ALAR
      - rhea: RHEA:20249
      - sbo: SBO:0000176
  - !!omap
    - id: XYLK
    - name: xylulokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - xu5p__D_c: 1.0
      - xylu__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: XYLK
      - rhea: RHEA:10964
      - sbo: SBO:0000176
  - !!omap
    - id: GLYK
    - name: glycerol kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc3p_c: 1.0
      - glyc_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLYK
      - rhea: RHEA:21644
      - sbo: SBO:0000176
  - !!omap
    - id: PPM
    - name: phosphopentomutase
    - metabolites: !!omap
      - r1p_c: -1.0
      - r5p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PPM
      - rhea: RHEA:18793
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCTO2
    - name: Glycolate oxidase
    - metabolites: !!omap
      - glx_c: 1.0
      - glyclt_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLYCTO2
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCTO3
    - name: Glycolate oxidase
    - metabolites: !!omap
      - glx_c: 1.0
      - glyclt_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLYCTO3
      - sbo: SBO:0000176
  - !!omap
    - id: IPPMIb
    - name: 2-isopropylmalate hydratase
    - metabolites: !!omap
      - 2ippm_c: -1.0
      - 3c3hmp_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: IPPMIb
      - rhea: RHEA:16293
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCTO4
    - name: Glycolate oxidase
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - 2dmmql8_c: 1.0
      - glx_c: 1.0
      - glyclt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLYCTO4
      - sbo: SBO:0000176
  - !!omap
    - id: DHAD2
    - name: Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)
    - metabolites: !!omap
      - 23dhmp_c: -1.0
      - 3mop_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: DHAD2
      - rhea: RHEA:27694
      - sbo: SBO:0000176
  - !!omap
    - id: POX
    - name: pyruvate oxidase
    - metabolites: !!omap
      - ac_c: 1.0
      - co2_c: 1.0
      - h2o_c: -1.0
      - pyr_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: POX
      - sbo: SBO:0000176
  - !!omap
    - id: IMPC
    - name: IMP cyclohydrolase
    - metabolites: !!omap
      - fprica_c: 1.0
      - h2o_c: -1.0
      - imp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: IMPC
      - rhea: RHEA:18445
      - sbo: SBO:0000176
  - !!omap
    - id: TMPPP
    - name: thiamine-phosphate diphosphorylase
    - metabolites: !!omap
      - 2mahmp_c: -1.0
      - 4mpetz_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - thmmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: TMPPP
      - rhea: RHEA:22328
      - sbo: SBO:0000176
  - !!omap
    - id: DHAD1
    - name: dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
    - metabolites: !!omap
      - 23dhmb_c: -1.0
      - 3mob_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: DHAD1
      - rhea: RHEA:24809
      - sbo: SBO:0000176
  - !!omap
    - id: IPPMIa
    - name: 3-isopropylmalate dehydratase
    - metabolites: !!omap
      - 2ippm_c: 1.0
      - 3c2hmp_c: -1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Valine, Leucine, and Isoleucine Metabolism
    - annotation: !!omap
      - biggr: IPPMIa
      - rhea: RHEA:10676
      - sbo: SBO:0000176
  - !!omap
    - id: G3PD7
    - name: glycerol-3-phosphate dehydrogenase (demethylmenaquinone-8)
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - 2dmmql8_c: 1.0
      - dhap_c: 1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: G3PD7
      - sbo: SBO:0000176
  - !!omap
    - id: SUCBZS
    - name: O-succinylbenzoate-CoA synthase
    - metabolites: !!omap
      - 2shchc_c: -1.0
      - h2o_c: 1.0
      - sucbz_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: SUCBZS
      - rhea: RHEA:10196
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__GLCS1
    - name: Glycogen synthase (ADPGlc)
    - metabolites: !!omap
      - __Ecoli_panGEMs__glycogen_c: 1.0
      - adp_c: 1.0
      - adpglc_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycolysis/Gluconeogenesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GLCS1
      - sbo: SBO:0000176
  - !!omap
    - id: RBK_L1
    - name: L-ribulokinase (L-ribulose)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - rbl__L_c: -1.0
      - ru5p__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RBK_L1
      - rhea: RHEA:22072
      - sbo: SBO:0000176
  - !!omap
    - id: TARTD
    - name: L(+)-tartrate dehydratase
    - metabolites: !!omap
      - h2o_c: 1.0
      - oaa_c: 1.0
      - tartr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: TARTD
      - rhea: RHEA:15413
      - sbo: SBO:0000176
  - !!omap
    - id: GLCRAL
    - name: 5-dehydro-4-deoxyglucarate aldolase
    - metabolites: !!omap
      - 2h3opp_c: 1.0
      - 5dh4dglc_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GLCRAL
      - rhea: RHEA:27726
      - sbo: SBO:0000176
  - !!omap
    - id: ALTRH
    - name: altronate hydrolase
    - metabolites: !!omap
      - 2ddglcn_c: 1.0
      - altrn_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03419
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALTRH
      - rhea: RHEA:15957
      - sbo: SBO:0000176
  - !!omap
    - id: HCYSMT
    - name: homocysteine S-methyltransferase
    - metabolites: !!omap
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
      - hcys__L_c: -1.0
      - met__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: HCYSMT
      - sbo: SBO:0000176
  - !!omap
    - id: LACZ
    - name: b-galactosidase
    - metabolites: !!omap
      - gal_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - lcts_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: LACZ
      - sbo: SBO:0000176
  - !!omap
    - id: PPC
    - name: phosphoenolpyruvate carboxylase
    - metabolites: !!omap
      - co2_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - oaa_c: 1.0
      - pep_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Anaplerotic Reactions
    - annotation: !!omap
      - biggr: PPC
      - sbo: SBO:0000176
  - !!omap
    - id: CITL
    - name: Citrate lyase
    - metabolites: !!omap
      - ac_c: 1.0
      - cit_c: -1.0
      - oaa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: CITL
      - rhea: RHEA:10760
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS1
    - name: Acyl-[acyl-carrier-protein] synthetase (n-C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__myrsACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - ttdca_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS1
      - sbo: SBO:0000176
  - !!omap
    - id: MANAO
    - name: Mannonate oxidoreductase
    - metabolites: !!omap
      - fruur_c: 1.0
      - h_c: 1.0
      - mana_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01697 and MNJNJBIH_04788
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MANAO
      - sbo: SBO:0000176
  - !!omap
    - id: UDPGALM
    - name: UDPgalactopyranose mutase
    - metabolites: !!omap
      - udpgal_c: -1.0
      - udpgalfur_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: UDPGALM
      - rhea: RHEA:24132
      - sbo: SBO:0000176
  - !!omap
    - id: TDPDRE
    - name: dTDP-4-dehydrorhamnose 3,5-epimerase
    - metabolites: !!omap
      - dtdp4d6dg_c: -1.0
      - dtdp4d6dm_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: TDPDRE
      - rhea: RHEA:16969
      - sbo: SBO:0000176
  - !!omap
    - id: TDPDRR
    - name: dTDP-4-dehydrorhamnose reductase
    - metabolites: !!omap
      - dtdp4d6dm_c: -1.0
      - dtdprmn_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: TDPDRR
      - rhea: RHEA:21796
      - sbo: SBO:0000176
  - !!omap
    - id: DDPGALA
    - name: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
    - metabolites: !!omap
      - 2dh3dgal6p_c: -1.0
      - g3p_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DDPGALA
      - sbo: SBO:0000176
  - !!omap
    - id: G3PD6
    - name: glycerol-3-phosphate dehydrogenase (menaquinone-8)
    - metabolites: !!omap
      - dhap_c: 1.0
      - glyc3p_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: G3PD6
      - rhea: RHEA:29223
      - sbo: SBO:0000176
  - !!omap
    - id: GLYAT
    - name: glycine C-acetyltransferase
    - metabolites: !!omap
      - 2aobut_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - gly_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04026
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: GLYAT
      - rhea: RHEA:20736
      - sbo: SBO:0000176
  - !!omap
    - id: IDOND
    - name: L-idonate 5-dehydrogenase
    - metabolites: !!omap
      - 5dglcn_c: -1.0
      - h_c: -1.0
      - idon__L_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: IDOND
      - rhea: RHEA:21172
      - sbo: SBO:0000176
  - !!omap
    - id: IDOND2
    - name: L-indonate 5-dehydrogenase (NADP)
    - metabolites: !!omap
      - 5dglcn_c: -1.0
      - h_c: -1.0
      - idon__L_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: IDOND2
      - rhea: RHEA:21176
      - sbo: SBO:0000176
  - !!omap
    - id: KDOPS
    - name: 3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase
    - metabolites: !!omap
      - ara5p_c: -1.0
      - h2o_c: -1.0
      - kdo8p_c: 1.0
      - pep_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: KDOPS
      - rhea: RHEA:14053
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MCOATA
    - name: Malonyl-CoA-ACP transacylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__malACP_c: 1.0
      - coa_c: 1.0
      - malcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MCOATA
      - sbo: SBO:0000176
  - !!omap
    - id: NMNDA
    - name: nicotinamide-nucleotide amidase
    - metabolites: !!omap
      - h2o_c: -1.0
      - nh4_c: 1.0
      - nicrnt_c: 1.0
      - nmn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: NMNDA
      - rhea: RHEA:12400
      - sbo: SBO:0000176
  - !!omap
    - id: P5CD
    - name: 1-pyrroline-5-carboxylate dehydrogenase
    - metabolites: !!omap
      - glu__L_c: 1.0
      - h2o_c: -2.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr5carb_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: P5CD
      - rhea: RHEA:16417
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS2
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__tdeACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - ttdcea_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS3
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__palmACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - hdca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS4
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__hdeACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - hdcea_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS4
      - sbo: SBO:0000176
  - !!omap
    - id: HOPNTAL
    - name: 4-hydroxy-2-oxopentanoate aldolase
    - metabolites: !!omap
      - 4h2opntn_c: -1.0
      - acald_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: HOPNTAL
      - rhea: RHEA:22624
      - sbo: SBO:0000176
  - !!omap
    - id: 3HPPPNH
    - name: 3-(3-hydroxy-phenyl)propionate hydroxylase
    - metabolites: !!omap
      - 3hpppn_c: -1.0
      - dhpppn_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 3HPPPNH
      - rhea: RHEA:24785
      - sbo: SBO:0000176
  - !!omap
    - id: AKGDH
    - name: 2-Oxogluterate dehydrogenase
    - metabolites: !!omap
      - akg_c: -1.0
      - co2_c: 1.0
      - coa_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - succoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Citric Acid Cycle
    - annotation: !!omap
      - biggr: AKGDH
      - rhea: RHEA:27786
      - sbo: SBO:0000176
  - !!omap
    - id: DCTPD
    - name: dCTP deaminase
    - metabolites: !!omap
      - dctp_c: -1.0
      - dutp_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: DCTPD
      - rhea: RHEA:22680
      - sbo: SBO:0000176
  - !!omap
    - id: AMANK
    - name: N-acetyl-D-mannosamine kinase
    - metabolites: !!omap
      - acmana_c: -1.0
      - acmanap_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: AMANK
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__UAGAAT
    - name: UDP-N-acetylglucosamine acyltransferase
    - metabolites: !!omap
      - __Ecoli_panGEMs__3hmrsACP_c: -1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - u3aga_c: 1.0
      - uacgam_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__UAGAAT
      - sbo: SBO:0000176
  - !!omap
    - id: HISTD
    - name: histidinol dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 3.0
      - his__L_c: 1.0
      - histd_c: -1.0
      - nad_c: -2.0
      - nadh_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: HISTD
      - rhea: RHEA:20641
      - sbo: SBO:0000176
  - !!omap
    - id: GMPR
    - name: GMP reductase
    - metabolites: !!omap
      - gmp_c: -1.0
      - h_c: -2.0
      - imp_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_00136
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: GMPR
      - rhea: RHEA:17185
      - sbo: SBO:0000176
  - !!omap
    - id: SERAT
    - name: serine O-acetyltransferase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acser_c: 1.0
      - coa_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04016
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: SERAT
      - rhea: RHEA:24560
      - sbo: SBO:0000176
  - !!omap
    - id: BPNT
    - name: 3',5'-bisphosphate nucleotidase
    - metabolites: !!omap
      - amp_c: 1.0
      - h2o_c: -1.0
      - pap_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: BPNT
      - rhea: RHEA:10040
      - sbo: SBO:0000176
  - !!omap
    - id: ASAD
    - name: aspartate-semialdehyde dehydrogenase
    - metabolites: !!omap
      - 4pasp_c: 1.0
      - aspsa_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Threonine and Lysine Metabolism
    - annotation: !!omap
      - biggr: ASAD
      - rhea: RHEA:24284
      - sbo: SBO:0000176
  - !!omap
    - id: NTRIR2x
    - name: nitrite Reductase (NADH)
    - metabolites: !!omap
      - h2o_c: 2.0
      - h_c: -5.0
      - nad_c: 3.0
      - nadh_c: -3.0
      - nh4_c: 1.0
      - no2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03719 and MNJNJBIH_03719
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NTRIR2x:2
      - sbo: SBO:0000176
  - !!omap
    - id: OCBT2i
    - name: ornithine carbamoyltransferase
    - metabolites: !!omap
      - cbp_c: -1.0
      - citr__L_c: 1.0
      - h_c: 1.0
      - orn__L_c: -1.0
      - pi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04765
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: OCBT2i
      - rhea: RHEA:19513
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA1
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)
    - metabolites: !!omap
      - chol_c: 1.0
      - g3pc_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA1
      - rhea: RHEA:16061
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA2
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
    - metabolites: !!omap
      - etha_c: 1.0
      - g3pe_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA2
      - sbo: SBO:0000176
  - !!omap
    - id: DXYLK
    - name: 1-Deoxy-D-xylulose kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dxyl5p_c: 1.0
      - dxyl_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DXYLK
      - rhea: RHEA:27990
      - sbo: SBO:0000176
  - !!omap
    - id: SGSAD
    - name: Succinylglutamic semialdehyde dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - sucglu_c: 1.0
      - sucgsa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: SGSAD
      - rhea: RHEA:10812
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA5
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol)
    - metabolites: !!omap
      - g3pi_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - inost_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA5
      - rhea: RHEA:16501
      - sbo: SBO:0000176
  - !!omap
    - id: SULR
    - name: sulfite reductase (NADPH2)
    - metabolites: !!omap
      - h2o_c: 3.0
      - h2s_c: 1.0
      - h_c: -5.0
      - nadp_c: 3.0
      - nadph_c: -3.0
      - so3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cysteine Metabolism
    - annotation: !!omap
      - biggr: SULR:2
      - sbo: SBO:0000176
  - !!omap
    - id: AMANAPEr
    - name: N-acetylmannosamine 6-phosphate epimerase
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acmanap_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: AMANAPEr
      - sbo: SBO:0000176
  - !!omap
    - id: MI1PP
    - name: myo-inositol 1-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - inost_c: 1.0
      - mi1p__D_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: MI1PP
      - rhea: RHEA:27670
      - sbo: SBO:0000176
  - !!omap
    - id: PPM2
    - name: phosphopentomutase 2 (deoxyribose)
    - metabolites: !!omap
      - 2dr1p_c: -1.0
      - 2dr5p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PPM2
      - rhea: RHEA:27658
      - sbo: SBO:0000176
  - !!omap
    - id: CBPS
    - name: carbamoyl-phosphate synthase (glutamine-hydrolysing)
    - metabolites: !!omap
      - adp_c: 2.0
      - atp_c: -2.0
      - cbp_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2co3_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: CBPS
      - rhea: RHEA:18633
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACOATA
    - name: Acetyl-CoA ACP transacylase
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__acACP_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Membrane Lipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACOATA
      - sbo: SBO:0000176
  - !!omap
    - id: SUCptspp
    - name: sucrose transport via PEP:Pyr  (periplasm)
    - metabolites: !!omap
      - pep_c: -1.0
      - pyr_c: 1.0
      - suc6p_c: 1.0
      - sucr_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SUCptspp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__TSULabcpp
    - name: Thiosulfate transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__tsul_c: 1.0
      - __Ecoli_panGEMs__tsul_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__TSULabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: DDGALK
    - name: 2-dehydro-3-deoxygalactonokinase
    - metabolites: !!omap
      - 2dh3dgal6p_c: 1.0
      - 2dh3dgal_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DDGALK
      - rhea: RHEA:16525
      - sbo: SBO:0000176
  - !!omap
    - id: TAURabcpp
    - name: taurine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - taur_c: 1.0
      - taur_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TAURabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 3HCINNMH
    - name: 3-hydroxycinnamate hydroxylase
    - metabolites: !!omap
      - 34dhcinm_c: 1.0
      - 3hcinnm_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 3HCINNMH
      - sbo: SBO:0000176
  - !!omap
    - id: THMabcpp
    - name: thiamine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - thm_c: 1.0
      - thm_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: THMabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FDMO
    - name: FMNH2-dependent monooxygenase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fmnh2_c: -1.0
      - gcald_c: 1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - isetac_c: -1.0
      - o2_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FDMO
      - sbo: SBO:0000176
  - !!omap
    - id: CBL1abcpp
    - name: Cob(1)alamin transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cbl1_c: 1.0
      - cbl1_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CBL1abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FEENTERabcpp
    - name: Fe-enterobactin transport via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__feenter_c: 1.0
      - __Ecoli_panGEMs__feenter_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FEENTERabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ALLabcpp
    - name: D-allose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - all__D_c: 1.0
      - all__D_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ALLabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3DCITabcpp
    - name: Iron transport from ferric-dicitrate via ABC system (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dcit_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - cit_c: 2.0
      - fe3_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3DCITabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CHLabcpp
    - name: choline transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - chol_c: 1.0
      - chol_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CHLabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FE3DCITtonex
    - name: Ferric-dicitrate transport via ton system (extracellular)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dcit_e: -1.0
      - __Ecoli_panGEMs__fe3dcit_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Outer Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FE3DCITtonex
      - sbo: SBO:0000655
  - !!omap
    - id: CYSabcpp
    - name: L-cysteine uptake via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: 1.0
      - cys__L_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYSabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: SBTptspp
    - name: D-sorbitol transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - pep_c: -1.0
      - pyr_c: 1.0
      - sbt6p_c: 1.0
      - sbt__D_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: SBTptspp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FDMO3
    - name: FMNH2-dependent monooxygenase (ethanesulfonate)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: 1.0
      - acald_c: 1.0
      - eths_c: -1.0
      - fmnh2_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - o2_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FDMO3
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FDMO4
    - name: FMNH2-dependent monooxygenase (butanesulfonate)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: 1.0
      - btal_c: 1.0
      - butso3_c: -1.0
      - fmnh2_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - o2_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FDMO4
      - sbo: SBO:0000176
  - !!omap
    - id: CYSabc2pp
    - name: L-cysteine export via ABC system (cytoplasm to periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: -1.0
      - cys__L_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CYSabc2pp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__O16GLCT1
    - name: Glucosyltransferase I (LPS O16 antigen biosynthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__aragund_c: -1.0
      - __Ecoli_panGEMs__garagund_c: 1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16GLCT1
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16AP2pp
    - name: O16 antigen polymerase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__o16a2und_p: -1.0
      - __Ecoli_panGEMs__o16a3und_p: 1.0
      - __Ecoli_panGEMs__o16aund_p: -1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16AP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16AP3pp
    - name: O16 antigen polymerase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__o16a3und_p: -1.0
      - __Ecoli_panGEMs__o16a4und_p: 1.0
      - __Ecoli_panGEMs__o16aund_p: -1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16AP3pp
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16A4Lpp
    - name: O16 anitgen (x4) ligase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_p: -1.0
      - __Ecoli_panGEMs__o16a4colipa_p: 1.0
      - __Ecoli_panGEMs__o16a4und_p: -1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16A4Lpp
      - sbo: SBO:0000176
  - !!omap
    - id: FEENTERtpp
    - name: enterochelin transport (secretion)
    - metabolites: !!omap
      - enter_c: -1.0
      - enter_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: FEENTERtpp:2
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__FDMO6
    - name: FMNH2-dependent monooxygenase (sulfoacetate)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fmnh2_c: -1.0
      - glx_c: 1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - o2_c: -1.0
      - so3_c: 1.0
      - sulfac_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FDMO6
      - sbo: SBO:0000176
  - !!omap
    - id: PHEMEabcpp
    - name: protoheme transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pheme_c: -1.0
      - pheme_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PHEMEabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GGGABADr
    - name: gamma-glutamyl-gamma aminobutyric acid dehydrogenase
    - metabolites: !!omap
      - gg4abut_c: 1.0
      - ggbutal_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GGGABADr
      - rhea: RHEA:28410
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ECA4OALpp
    - name: Enterobacterial common antigen (x4) O-antigen ligase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_p: -1.0
      - __Ecoli_panGEMs__eca4colipa_p: 1.0
      - __Ecoli_panGEMs__eca4und_p: -1.0
      - h_p: 1.0
      - udcpdp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ECA4OALpp
      - sbo: SBO:0000176
  - !!omap
    - id: HG2abcpp
    - name: Mercury (Hg+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hg2_c: -1.0
      - hg2_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: HG2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__HEPT4
    - name: Heptosyltransferase IV (LPS core synthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__colipa_c: 1.0
      - __Ecoli_panGEMs__gggagicolipa_c: -1.0
      - adp_c: 1.0
      - adphep_LD_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__HEPT4
      - sbo: SBO:0000176
  - !!omap
    - id: NHFRBO
    - name: NADH:flavorubredoxin oxidoreductase
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -1.0
      - n2o_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - no_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Nitrogen Metabolism
    - annotation: !!omap
      - biggr: NHFRBO
      - rhea: RHEA:29607
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FDMO2
    - name: FMNH2-dependent monooxygenase (methanesulfonate)
    - metabolites: !!omap
      - __Ecoli_panGEMs__fmn_c: 1.0
      - fald_c: 1.0
      - fmnh2_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - mso3_c: -1.0
      - o2_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FDMO2
      - sbo: SBO:0000176
  - !!omap
    - id: R15BPK
    - name: ribose-1,5-bisphosphokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - prpp_c: 1.0
      - r15bp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: R15BPK
      - rhea: RHEA:20109
      - sbo: SBO:0000176
  - !!omap
    - id: Kabcpp
    - name: Potassium ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - k_c: 1.0
      - k_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: Kabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CBIuabcpp
    - name: Cobinamide transport via ABC system (uptake, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cbi_c: 1.0
      - cbi_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CBIuabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: IDONt2rpp
    - name: L-idonate transport via proton symport, reversible (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - idon__L_c: 1.0
      - idon__L_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: IDONt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: PROt4pp
    - name: Na+/Proline-L symporter (periplasm)
    - metabolites: !!omap
      - na1_c: 1.0
      - na1_p: -1.0
      - pro__L_c: 1.0
      - pro__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PROt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: ADOCBLabcpp
    - name: Adenosylcobalamin transport via ABC system (periplasm)
    - metabolites: !!omap
      - adocbl_c: 1.0
      - adocbl_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: ADOCBLabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ALLPI
    - name: Allose 6-phosphate isomerase
    - metabolites: !!omap
      - all6p_c: -1.0
      - allul6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALLPI
      - rhea: RHEA:28430
      - sbo: SBO:0000176
  - !!omap
    - id: ALLK
    - name: Allose kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - all6p_c: 1.0
      - all__D_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALLK
      - rhea: RHEA:14805
      - sbo: SBO:0000176
  - !!omap
    - id: ALLULPE
    - name: Allulose 6-phosphate epimerase
    - metabolites: !!omap
      - allul6p_c: -1.0
      - f6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ALLULPE
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16AT
    - name: Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate 
        O-acetyltransferase (LPS O16 antigen biosynthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__aragund_c: 1.0
      - __Ecoli_panGEMs__ragund_c: -1.0
      - accoa_c: -1.0
      - coa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16AT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16GALFT
    - name: Galactofuranosyltransferase (LPS O16 antigen biosynthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__garagund_c: -1.0
      - __Ecoli_panGEMs__gfgaragund_c: 1.0
      - h_c: 1.0
      - udp_c: 1.0
      - udpgalfur_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16GALFT
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__O16AUNDtpp
    - name: O16 antigen (flippase, cytoplasm to periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__o16aund_c: -1.0
      - __Ecoli_panGEMs__o16aund_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16AUNDtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__O16AP1pp
    - name: O16 antigen polymerase (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__o16a2und_p: 1.0
      - __Ecoli_panGEMs__o16aund_p: -2.0
      - h_p: 1.0
      - udcpdp_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__O16AP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: CU2abcpp
    - name: Copper (Cu+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cu2_c: -1.0
      - cu2_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CU2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: COBALT2abcpp
    - name: Cobalt (Co+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cobalt2_c: -1.0
      - cobalt2_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: COBALT2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: NI2abcpp
    - name: Nickle (Ni+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ni2_c: -1.0
      - ni2_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: NI2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: HCYSMT2
    - name: Homocysteine Methyltransferase
    - metabolites: !!omap
      - h_c: 1.0
      - hcys__L_c: -1.0
      - met__L_c: 2.0
      - mmet_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Methionine Metabolism
    - annotation: !!omap
      - biggr: HCYSMT2
      - rhea: RHEA:26337
      - sbo: SBO:0000176
  - !!omap
    - id: FALDH2
    - name: formaldehyde dehydrogenase
    - metabolites: !!omap
      - Sfglutth_c: 1.0
      - h_c: 1.0
      - hmgth_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: FALDH2
      - rhea: RHEA:19985
      - sbo: SBO:0000176
  - !!omap
    - id: MMETt2pp
    - name: S-methylmethionine permease (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - mmet_c: 1.0
      - mmet_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MMETt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: ACGK
    - name: acetylglutamate kinase
    - metabolites: !!omap
      - acg5p_c: 1.0
      - acglu_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: ACGK
      - rhea: RHEA:14629
      - sbo: SBO:0000176
  - !!omap
    - id: FHL
    - name: Formate-hydrogen lyase
    - metabolites: !!omap
      - co2_c: 1.0
      - for_c: -1.0
      - h2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 0.0
    - gene_reaction_rule: GAP
    - subsystem: Pyruvate Metabolism
    - annotation: !!omap
      - biggr: FHL
      - rhea: RHEA:27610
      - sbo: SBO:0000176
  - !!omap
    - id: GALTptspp
    - name: Galactitol transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - galt1p_c: 1.0
      - galt_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GALTptspp
      - sbo: SBO:0000655
  - !!omap
    - id: ZN2abcpp
    - name: Zinc (Zn+2) ABC transporter, efflux (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - zn2_c: -1.0
      - zn2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: ZN2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__DAAD
    - name: D-Amino acid dehydrogenase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - ala__D_c: -1.0
      - fadh2_c: 1.0
      - h2o_c: -1.0
      - nh4_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alanine and Aspartate Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DAAD
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACMUMptspp
    - name: N-acetylmuramate transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - __Ecoli_panGEMs__acmum_p: -1.0
      - acmum6p_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACMUMptspp
      - sbo: SBO:0000655
  - !!omap
    - id: HSTPT
    - name: histidinol-phosphate transaminase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - hisp_c: 1.0
      - imacp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Histidine Metabolism
    - annotation: !!omap
      - biggr: HSTPT
      - rhea: RHEA:23744
      - sbo: SBO:0000176
  - !!omap
    - id: GLUSy
    - name: glutamate synthase (NADPH)
    - metabolites: !!omap
      - akg_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 2.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glutamate Metabolism
    - annotation: !!omap
      - biggr: GLUSy
      - rhea: RHEA:15501
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS5
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__octeACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ocdcea_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS5
      - sbo: SBO:0000176
  - !!omap
    - id: CD2abcpp
    - name: Cadmium (Cd+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cd2_c: -1.0
      - cd2_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: CD2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__RHAT1
    - name: Rhamnosyltransferase I (LPS core biosynthesis)
    - metabolites: !!omap
      - __Ecoli_panGEMs__icolipa_c: 1.0
      - __Ecoli_panGEMs__kphphhlipa_c: -1.0
      - dtdp_c: 1.0
      - dtdprmn_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Lipopolysaccharide Biosynthesis / Recycling
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__RHAT1
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA4
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)
    - metabolites: !!omap
      - g3pg_c: -1.0
      - glyc3p_c: 1.0
      - glyc_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA4
      - rhea: RHEA:29907
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS8
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C10:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__dcaACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - dca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS8
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS9
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C8:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__ocACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - octa_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS9
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS6
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__ocdcaACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ocdca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS6
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__AACPS7
    - name: Acyl-[acyl-carrier-protein] synthetase  (n-C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: -1.0
      - __Ecoli_panGEMs__ddcaACP_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - ddca_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__AACPS7
      - sbo: SBO:0000176
  - !!omap
    - id: PROGLYabcpp
    - name: L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - progly_c: 1.0
      - progly_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PROGLYabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GTHRDabcpp
    - name: Reduced glutathione via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gthrd_c: 1.0
      - gthrd_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GTHRDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: AICART
    - name: phosphoribosylaminoimidazolecarboxamide formyltransferase
    - metabolites: !!omap
      - 10fthf_c: -1.0
      - aicar_c: -1.0
      - fprica_c: 1.0
      - thf_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Purine and Pyrimidine Biosynthesis
    - annotation: !!omap
      - biggr: AICART
      - rhea: RHEA:22192
      - sbo: SBO:0000176
  - !!omap
    - id: GGPTRCO
    - name: gamma glutamyl putrescine oxidase
    - metabolites: !!omap
      - ggbutal_c: 1.0
      - ggptrc_c: -1.0
      - h2o2_c: 1.0
      - h2o_c: -1.0
      - nh4_c: 1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: GGPTRCO
      - rhea: RHEA:28414
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCK
    - name: glycerate kinase
    - metabolites: !!omap
      - 3pg_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc__R_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glyoxylate Metabolism
    - annotation: !!omap
      - biggr: GLYCK
      - rhea: RHEA:23516
      - sbo: SBO:0000176
  - !!omap
    - id: GPDDA3
    - name: Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
    - metabolites: !!omap
      - g3ps_c: -1.0
      - glyc3p_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ser__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: GPDDA3
      - rhea: RHEA:29875
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT141
    - name: Glycerol-3-phosphate acyltransferase (C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdec7eg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__tdeACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT181
    - name: Glycerol-3-phosphate acyltransferase (C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1odec11eg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__octeACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT181
      - sbo: SBO:0000176
  - !!omap
    - id: SUCDi
    - name: succinate dehydrogenase (irreversible)
    - metabolites: !!omap
      - fum_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
      - succ_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: SUCDi
      - rhea: RHEA:29187
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__FADRx2
    - name: FAD reductase
    - metabolites: !!omap
      - __Ecoli_panGEMs__fad_c: -1.0
      - fadh2_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__FADRx2
      - sbo: SBO:0000176
  - !!omap
    - id: GTHRDHpp
    - name: glutathione hydralase (periplasmic)
    - metabolites: !!omap
      - cgly_p: 1.0
      - glu__L_p: 1.0
      - gthrd_p: -1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: GTHRDHpp
      - rhea: RHEA:28807
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT140
    - name: Glycerol-3-phosphate acyltransferase (C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1tdecg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT160
    - name: Glycerol-3-phosphate acyltransferase (C16:0)
    - metabolites: !!omap
      - 1hdecg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__palmACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT160
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT161
    - name: Glycerol-3-phosphate acyltransferase (C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__1hdec9eg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdeACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT180
    - name: Glycerol-3-phosphate acyltransferase (C18:0)
    - metabolites: !!omap
      - 1odecg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ocdcaACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT180
      - sbo: SBO:0000176
  - !!omap
    - id: CGLYabcpp
    - name: L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cgly_c: 1.0
      - cgly_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: CGLYabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__G3PAT120
    - name: Glycerol-3-phosphate acyltransferase (C12:0)
    - metabolites: !!omap
      - 1ddecg3p_c: 1.0
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ddcaACP_c: -1.0
      - glyc3p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__G3PAT120
      - sbo: SBO:0000176
  - !!omap
    - id: GTHRDabc2pp
    - name: glutathione export via ABC system (cytoplasm to periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gthrd_c: -1.0
      - gthrd_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: GTHRDabc2pp
      - sbo: SBO:0000655
  - !!omap
    - id: NADH16pp
    - name: NADH dehydrogenase (ubiquinone-8 & 3 protons) (periplasm)
    - metabolites: !!omap
      - h_c: -4.0
      - h_p: 3.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03151 and MNJNJBIH_02486
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADH16pp
      - sbo: SBO:0000655
  - !!omap
    - id: NADH18pp
    - name: NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm)
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - 2dmmql8_c: 1.0
      - h_c: -4.0
      - h_p: 3.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADH18pp
      - sbo: SBO:0000655
  - !!omap
    - id: 5DGLCNt2rpp
    - name: 5-Dehydro-D-gluconate transport via proton symport, reversible 
        (periplasm)
    - metabolites: !!omap
      - 5dglcn_c: 1.0
      - 5dglcn_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: 5DGLCNt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: NADH17pp
    - name: NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm)
    - metabolites: !!omap
      - h_c: -4.0
      - h_p: 3.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Oxidative Phosphorylation
    - annotation: !!omap
      - biggr: NADH17pp
      - sbo: SBO:0000655
  - !!omap
    - id: PPAt4pp
    - name: Na+/Propionate symporter (periplasm)
    - metabolites: !!omap
      - na1_c: 1.0
      - na1_p: -1.0
      - prpnte_c: 1.0
      - prpnte_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PPAt4pp
      - sbo: SBO:0000655
  - !!omap
    - id: 3AMACHYD
    - name: 3-aminoacrylate hydrolase
    - metabolites: !!omap
      - 3amac_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - msa_c: 1.0
      - nh4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: 3AMACHYD
      - rhea: RHEA:34947
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT140
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C14:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__myrsACP_c: -1.0
      - __Ecoli_panGEMs__ttdcap_c: 1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT140
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT141
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C14:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__tdeACP_c: -1.0
      - __Ecoli_panGEMs__ttdceap_c: 1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT141
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT161
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C16:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdceap_c: 1.0
      - __Ecoli_panGEMs__hdeACP_c: -1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT161
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT180
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C18:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ocdcaACP_c: -1.0
      - __Ecoli_panGEMs__ocdcap_c: 1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT180
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BMOCOS
    - name: Bis-molybdenum cofactor synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__bmoco_c: 1.0
      - __Ecoli_panGEMs__moco_c: -1.0
      - __Ecoli_panGEMs__mptamp_c: -1.0
      - amp_c: 1.0
      - cu2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BMOCOS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__BWCOS
    - name: Tungsten bispterin cofactor synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__bwco_c: 1.0
      - __Ecoli_panGEMs__mptamp_c: -1.0
      - __Ecoli_panGEMs__wco_c: -1.0
      - amp_c: 1.0
      - cu2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__BWCOS
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT120
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C12:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ddcaACP_c: -1.0
      - __Ecoli_panGEMs__ddcap_c: 1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT120
      - sbo: SBO:0000176
  - !!omap
    - id: MMM
    - name: Methylmalonyl-CoA mutase
    - metabolites: !!omap
      - mmcoa__S_c: 1.0
      - succoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03195
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: MMM
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__WCOS
    - name: Tungsten pterin cofactor synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__mptamp_c: -1.0
      - __Ecoli_panGEMs__wco_c: 1.0
      - amp_c: 1.0
      - cu2_c: 1.0
      - h2o_c: 1.0
      - h_c: -2.0
      - tungs_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__WCOS
      - sbo: SBO:0000176
  - !!omap
    - id: NADPHXD
    - name: NADPHX dehydratase
    - metabolites: !!omap
      - adp_c: -1.0
      - amp_c: 1.0
      - h_c: 1.0
      - nadph_c: 1.0
      - nadphx__S_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADPHXD
      - rhea: RHEA:32235
      - sbo: SBO:0000176
  - !!omap
    - id: NADPHXE
    - name: NADPHX epimerase
    - metabolites: !!omap
      - nadphx__R_c: -1.0
      - nadphx__S_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADPHXE
      - rhea: RHEA:32227
      - sbo: SBO:0000176
  - !!omap
    - id: 3OXCOAT
    - name: 3-oxoadipyl-CoA thiolase
    - metabolites: !!omap
      - accoa_c: 1.0
      - coa_c: -1.0
      - oxadpcoa_c: -1.0
      - succoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 3OXCOAT
      - rhea: RHEA:19481
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__DHBSZ3FEabcpp
    - name: 23dhbsz3 Fe III transport via ABC system periplasm
    - metabolites: !!omap
      - __Ecoli_panGEMs__fe3dhbzs3_c: 1.0
      - __Ecoli_panGEMs__fe3dhbzs3_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__DHBSZ3FEabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: DXYLTD
    - name: D-xylonate dehydratase
    - metabolites: !!omap
      - 2ddara_c: 1.0
      - dxylnt_c: -1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: DXYLTD
      - rhea: RHEA:19157
      - sbo: SBO:0000176
  - !!omap
    - id: 2DDARAA
    - name: 2-dehydro-3-deoxy-D-arabinonate Aldolase
    - metabolites: !!omap
      - 2ddara_c: -1.0
      - gcald_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 2DDARAA
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT160
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C16:0)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__hdcap_c: 1.0
      - __Ecoli_panGEMs__palmACP_c: -1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT160
      - sbo: SBO:0000176
  - !!omap
    - id: OMPHHXy
    - name: 2-octaprenyl-6-methoxyphenol hydroxylase (NADPH)
    - metabolites: !!omap
      - 2ombzl_c: 1.0
      - 2omph_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: OMPHHXy
      - rhea: RHEA:29407
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ACPPAT181
    - name: Acyl-(acyl carrier protein):phosphate acyltransferase (C18:1)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ACP_c: 1.0
      - __Ecoli_panGEMs__ocdceap_c: 1.0
      - __Ecoli_panGEMs__octeACP_c: -1.0
      - h_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycerophospholipid Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ACPPAT181
      - sbo: SBO:0000176
  - !!omap
    - id: 6D6SPA
    - name: 6-deoxy-6-sulfofructose-1-phosphate aldolase
    - metabolites: !!omap
      - dhap_c: 1.0
      - sfp_c: -1.0
      - sla_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 6D6SPA
      - sbo: SBO:0000176
  - !!omap
    - id: TRPtipp
    - name: L-tryptophan transport out (periplasm)
    - metabolites: !!omap
      - trp__L_c: -1.0
      - trp__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TRPtipp
      - sbo: SBO:0000655
  - !!omap
    - id: TYRtipp
    - name: L-tyrosine transport out (periplasm)
    - metabolites: !!omap
      - tyr__L_c: -1.0
      - tyr__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: TYRtipp
      - sbo: SBO:0000655
  - !!omap
    - id: __Ecoli_panGEMs__GHBDHx
    - name: Gamma-hydroxybutyrate dehydrogenase (NADH)
    - metabolites: !!omap
      - __Ecoli_panGEMs__ghb_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - sucsal_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__GHBDHx
      - sbo: SBO:0000176
  - !!omap
    - id: PHEtipp
    - name: L-phenylalanine transport out (periplasm)
    - metabolites: !!omap
      - phe__L_c: -1.0
      - phe__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: PHEtipp
      - sbo: SBO:0000655
  - !!omap
    - id: G2PP
    - name: glycerol-2-phosphate phosphatase
    - metabolites: !!omap
      - glyc2p_c: -1.0
      - glyc_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: G2PP
      - rhea: RHEA:13105
      - sbo: SBO:0000176
  - !!omap
    - id: SHGO
    - name: S-2-hydroxyglutarate oxidase
    - metabolites: !!omap
      - akg_c: 1.0
      - h2o2_c: 1.0
      - o2_c: -1.0
      - s2hydog_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Glycine and Serine Metabolism
    - annotation: !!omap
      - biggr: SHGO
      - rhea: RHEA:27662
      - sbo: SBO:0000176
  - !!omap
    - id: NADHXD
    - name: NADHX dehydratase
    - metabolites: !!omap
      - adp_c: -1.0
      - amp_c: 1.0
      - h_c: 1.0
      - nadh_c: 1.0
      - nadhx__S_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADHXD
      - rhea: RHEA:32223
      - sbo: SBO:0000176
  - !!omap
    - id: NADHXE
    - name: NADHX epimerase
    - metabolites: !!omap
      - nadhx__R_c: 1.0
      - nadhx__S_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Metabolite Repair
    - annotation: !!omap
      - biggr: NADHXE
      - rhea: RHEA:32215
      - sbo: SBO:0000176
  - !!omap
    - id: SELabcpp
    - name: selenatenate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - sel_c: 1.0
      - sel_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SELabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: SEPHCHCS
    - name: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate 
        synthase
    - metabolites: !!omap
      - 2sephchc_c: 1.0
      - akg_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - ichor_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: SEPHCHCS
      - rhea: RHEA:25593
      - sbo: SBO:0000176
  - !!omap
    - id: DHNCOAS
    - name: 1,4-dihydroxy-2-napthoyl-CoA synthase
    - metabolites: !!omap
      - 14dhncoa_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - sbzcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: DHNCOAS
      - rhea: RHEA:26562
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PUACGAMtr
    - name: Transport of poly-?-1,6-N-acetyl-D-glucosamine 
        (poly-?-1,6-N-acetyl-D-glucosamine synthase)
    - metabolites: !!omap
      - __Ecoli_panGEMs__puacgam_c: -1.0
      - __Ecoli_panGEMs__puacgam_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PUACGAMtr
      - sbo: SBO:0000655
  - !!omap
    - id: 5DGLCNR
    - name: 5-dehydro-D-gluconate reductase
    - metabolites: !!omap
      - 5dglcn_c: -1.0
      - glcn_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 5DGLCNR
      - rhea: RHEA:23936
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__PUACGAMS
    - name: Poly-?-1,6-N-acetyl-D-glucosamine synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__puacgam_c: -1.0
      - uacgam_c: 1.0
      - udp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cell Envelope Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__PUACGAMS
      - sbo: SBO:0000176
  - !!omap
    - id: RU5PP
    - name: Ribulose-5-Phosphate Phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - rbl__D_c: 1.0
      - ru5p__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RU5PP
      - sbo: SBO:0000176
  - !!omap
    - id: 3SLAR
    - name: 3-sulfolactaldehyde reductase
    - metabolites: !!omap
      - dhps_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - sla_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 3SLAR
      - sbo: SBO:0000176
  - !!omap
    - id: CPL
    - name: carbon-phosphorous lyase
    - metabolites: !!omap
      - ch4_c: 1.0
      - prcp_c: 1.0
      - prpmn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: CPL
      - sbo: SBO:0000176
  - !!omap
    - id: TYRL
    - name: tyrosine lyase
    - metabolites: !!omap
      - amet_c: -1.0
      - dad_5_c: 1.0
      - dhgly_c: 1.0
      - h_c: 1.0
      - met__L_c: 1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pcresol_c: 1.0
      - tyr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_04459
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: TYRL:2
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__THZPSN3
    - name: Thiazole phosphate synthesis
    - metabolites: !!omap
      - 4mpetz_c: 1.0
      - __Ecoli_panGEMs__iscs_c: 1.0
      - __Ecoli_panGEMs__iscssh_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - co2_c: 1.0
      - dhgly_c: -1.0
      - dxyl5p_c: -1.0
      - h2o_c: 2.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__THZPSN3
      - sbo: SBO:0000176
  - !!omap
    - id: AMPNTAT
    - name: aminoalkylphosphonate N-acetyltransferase
    - metabolites: !!omap
      - acampnt_c: 1.0
      - accoa_c: -1.0
      - ampnt_c: -1.0
      - coa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: AMPNTAT
      - rhea: RHEA:51428
      - sbo: SBO:0000176
  - !!omap
    - id: SQGH
    - name: sulfoquinovosidase
    - metabolites: !!omap
      - glyc_c: 1.0
      - h2o_c: -1.0
      - sq_c: 1.0
      - sqg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: SQGH
      - rhea: RHEA:70727
      - sbo: SBO:0000176
  - !!omap
    - id: ARMEPNS
    - name: ?-D-ribose 1-methylphosphonate 5-triphosphate synthase
    - metabolites: !!omap
      - ade_c: 1.0
      - atp_c: -1.0
      - mepn_c: -1.0
      - rpntp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: ARMEPNS
      - rhea: RHEA:34679
      - sbo: SBO:0000176
  - !!omap
    - id: RPNTPH
    - name: RPnTP hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - prpmn_c: 1.0
      - rpntp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: RPNTPH
      - rhea: RHEA:34683
      - sbo: SBO:0000176
  - !!omap
    - id: PRCPD
    - name: 5-phospho-?-D-ribosyl 1,2-cyclic phosphate phosphodiesterase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - prcp_c: -1.0
      - r15bp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PRCPD
      - rhea: RHEA:34795
      - sbo: SBO:0000176
  - !!omap
    - id: MEPNabcpp
    - name: methylpshophonic acid abc transporter
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mepn_c: 1.0
      - mepn_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Transport, Inner Membrane
    - annotation: !!omap
      - biggr: MEPNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PROD3
    - name: Proline dehydrogenase (q8)
    - metabolites: !!omap
      - h_c: 1.0
      - pro__L_c: -1.0
      - pyr5carb_c: 1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Arginine and Proline Metabolism
    - annotation: !!omap
      - biggr: PROD3
      - sbo: SBO:0000176
  - !!omap
    - id: 3HPADHi
    - name: 3-Hydroxypropanal Dehydrogenase
    - metabolites: !!omap
      - 3hpp_c: 1.0
      - 3hppnl_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: 3HPADHi
      - rhea: RHEA:59432
      - sbo: SBO:0000176
  - !!omap
    - id: SLNTabcpp
    - name: selenite ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - slnt_c: 1.0
      - slnt_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Inorganic Ion Transport and Metabolism
    - annotation: !!omap
      - biggr: SLNTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PACCOAE
    - name: ring 1,2-phenylacetyl-CoA epoxidase (NADPH)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - o2_c: -1.0
      - phaccoa_c: -1.0
      - rephaccoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: PACCOAE
      - rhea: RHEA:32171
      - sbo: SBO:0000176
  - !!omap
    - id: OXDHCOAT
    - name: 3-oxo-5,6-dehydrosuberyl-CoA thiolase
    - metabolites: !!omap
      - 23dhacoa_c: 1.0
      - 3oxdhscoa_c: -1.0
      - accoa_c: 1.0
      - coa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Alternate Carbon Metabolism
    - annotation: !!omap
      - biggr: OXDHCOAT
      - rhea: RHEA:34799
      - sbo: SBO:0000176
  - !!omap
    - id: PYROX
    - name: pyrimidine oxygenase
    - metabolites: !!omap
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - o2_c: -1.0
      - ura_c: -1.0
      - uracp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Nucleotide Salvage Pathway
    - annotation: !!omap
      - biggr: PYROX
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__MOCOS
    - name: Molybdenum cofactor synthase
    - metabolites: !!omap
      - __Ecoli_panGEMs__moco_c: 1.0
      - __Ecoli_panGEMs__mptamp_c: -1.0
      - amp_c: 1.0
      - cu2_c: 1.0
      - h2o_c: 1.0
      - h_c: -2.0
      - mobd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: GAP
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__MOCOS
      - sbo: SBO:0000176
  - !!omap
    - id: THZPSN
    - name: thiazole phosphate synthesis
    - metabolites: !!omap
      - 4hba_c: 1.0
      - 4mpetz_c: 1.0
      - ala__L_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - co2_c: 1.0
      - cys__L_c: -1.0
      - dxyl5p_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - tyr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_03433
    - subsystem: Cofactor and Prosthetic Group Biosynthesis
    - notes: !!omap
      - original_bigg_ids:
        - THZPSN
    - annotation: !!omap
      - biggr: THZPSN
      - sbo: SBO:0000176
  - !!omap
    - id: __Ecoli_panGEMs__ENLIPIDAt2ex
    - name: Phosphoethanolamine lipid IVa transport via vector periplasm to 
        extracellular
    - metabolites: !!omap
      - __Ecoli_panGEMs__LptA_p: 1.0
      - __Ecoli_panGEMs__enlipidA_LptA_p: -1.0
      - __Ecoli_panGEMs__enlipidA_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: MNJNJBIH_01555
    - subsystem: S_Lipopolysaccharide_Biosynthesis_Recycling
    - notes: !!omap
      - original_bigg_ids:
        - ENLIPIDAt2ex
    - annotation: !!omap
      - biggr: __Ecoli_panGEMs__ENLIPIDAt2ex
      - sbo: SBO:0000655
- genes:
  - !!omap
    - id: MNJNJBIH_02253
    - name: ''
  - !!omap
    - id: MNJNJBIH_00287
    - name: ''
  - !!omap
    - id: MNJNJBIH_00161
    - name: ''
  - !!omap
    - id: MNJNJBIH_02736
    - name: ''
  - !!omap
    - id: MNJNJBIH_00523
    - name: ''
  - !!omap
    - id: MNJNJBIH_03627
    - name: ''
  - !!omap
    - id: MNJNJBIH_01831
    - name: ''
  - !!omap
    - id: MNJNJBIH_01195
    - name: ''
  - !!omap
    - id: MNJNJBIH_01434
    - name: ''
  - !!omap
    - id: MNJNJBIH_04270
    - name: ''
  - !!omap
    - id: MNJNJBIH_00292
    - name: ''
  - !!omap
    - id: MNJNJBIH_00781
    - name: ''
  - !!omap
    - id: MNJNJBIH_00967
    - name: ''
  - !!omap
    - id: MNJNJBIH_02786
    - name: ''
  - !!omap
    - id: MNJNJBIH_04856
    - name: ''
  - !!omap
    - id: MNJNJBIH_04860
    - name: ''
  - !!omap
    - id: MNJNJBIH_00391
    - name: ''
  - !!omap
    - id: MNJNJBIH_01378
    - name: ''
  - !!omap
    - id: MNJNJBIH_04138
    - name: ''
  - !!omap
    - id: MNJNJBIH_03321
    - name: ''
  - !!omap
    - id: MNJNJBIH_01738
    - name: ''
  - !!omap
    - id: MNJNJBIH_04737
    - name: ''
  - !!omap
    - id: MNJNJBIH_02715
    - name: ''
  - !!omap
    - id: MNJNJBIH_03002
    - name: ''
  - !!omap
    - id: MNJNJBIH_00456
    - name: ''
  - !!omap
    - id: MNJNJBIH_03765
    - name: ''
  - !!omap
    - id: MNJNJBIH_01627
    - name: ''
  - !!omap
    - id: MNJNJBIH_03355
    - name: ''
  - !!omap
    - id: MNJNJBIH_00040
    - name: ''
  - !!omap
    - id: MNJNJBIH_02492
    - name: ''
  - !!omap
    - id: MNJNJBIH_02571
    - name: ''
  - !!omap
    - id: MNJNJBIH_04182
    - name: ''
  - !!omap
    - id: MNJNJBIH_04544
    - name: ''
  - !!omap
    - id: MNJNJBIH_01034
    - name: ''
  - !!omap
    - id: MNJNJBIH_00936
    - name: ''
  - !!omap
    - id: MNJNJBIH_04243
    - name: ''
  - !!omap
    - id: MNJNJBIH_00491
    - name: ''
  - !!omap
    - id: MNJNJBIH_01797
    - name: ''
  - !!omap
    - id: MNJNJBIH_04023
    - name: ''
  - !!omap
    - id: MNJNJBIH_01275
    - name: ''
  - !!omap
    - id: MNJNJBIH_04126
    - name: ''
  - !!omap
    - id: MNJNJBIH_04742
    - name: ''
  - !!omap
    - id: MNJNJBIH_03208
    - name: ''
  - !!omap
    - id: MNJNJBIH_04377
    - name: ''
  - !!omap
    - id: MNJNJBIH_03799
    - name: ''
  - !!omap
    - id: MNJNJBIH_02006
    - name: ''
  - !!omap
    - id: MNJNJBIH_01811
    - name: ''
  - !!omap
    - id: MNJNJBIH_03723
    - name: ''
  - !!omap
    - id: MNJNJBIH_02641
    - name: ''
  - !!omap
    - id: MNJNJBIH_03880
    - name: ''
  - !!omap
    - id: MNJNJBIH_04197
    - name: ''
  - !!omap
    - id: MNJNJBIH_01057
    - name: ''
  - !!omap
    - id: MNJNJBIH_04053
    - name: ''
  - !!omap
    - id: MNJNJBIH_00457
    - name: ''
  - !!omap
    - id: MNJNJBIH_00108
    - name: ''
  - !!omap
    - id: MNJNJBIH_00109
    - name: ''
  - !!omap
    - id: MNJNJBIH_04368
    - name: ''
  - !!omap
    - id: MNJNJBIH_01407
    - name: ''
  - !!omap
    - id: MNJNJBIH_01406
    - name: ''
  - !!omap
    - id: MNJNJBIH_01012
    - name: ''
  - !!omap
    - id: MNJNJBIH_03790
    - name: ''
  - !!omap
    - id: MNJNJBIH_04331
    - name: ''
  - !!omap
    - id: MNJNJBIH_03444
    - name: ''
  - !!omap
    - id: MNJNJBIH_01006
    - name: ''
  - !!omap
    - id: MNJNJBIH_01007
    - name: ''
  - !!omap
    - id: MNJNJBIH_02821
    - name: ''
  - !!omap
    - id: MNJNJBIH_01412
    - name: ''
  - !!omap
    - id: MNJNJBIH_01409
    - name: ''
  - !!omap
    - id: MNJNJBIH_04647
    - name: ''
  - !!omap
    - id: MNJNJBIH_04645
    - name: ''
  - !!omap
    - id: MNJNJBIH_04644
    - name: ''
  - !!omap
    - id: MNJNJBIH_04646
    - name: ''
  - !!omap
    - id: MNJNJBIH_02845
    - name: ''
  - !!omap
    - id: MNJNJBIH_02846
    - name: ''
  - !!omap
    - id: MNJNJBIH_02499
    - name: ''
  - !!omap
    - id: MNJNJBIH_02534
    - name: ''
  - !!omap
    - id: MNJNJBIH_01408
    - name: ''
  - !!omap
    - id: MNJNJBIH_02498
    - name: ''
  - !!omap
    - id: MNJNJBIH_02000
    - name: ''
  - !!omap
    - id: MNJNJBIH_03445
    - name: ''
  - !!omap
    - id: MNJNJBIH_00463
    - name: ''
  - !!omap
    - id: MNJNJBIH_04235
    - name: ''
  - !!omap
    - id: MNJNJBIH_04467
    - name: ''
  - !!omap
    - id: MNJNJBIH_04043
    - name: ''
  - !!omap
    - id: MNJNJBIH_00215
    - name: ''
  - !!omap
    - id: MNJNJBIH_02546
    - name: ''
  - !!omap
    - id: MNJNJBIH_04284
    - name: ''
  - !!omap
    - id: MNJNJBIH_00581
    - name: ''
  - !!omap
    - id: MNJNJBIH_03034
    - name: ''
  - !!omap
    - id: MNJNJBIH_03203
    - name: ''
  - !!omap
    - id: MNJNJBIH_05603
    - name: ''
  - !!omap
    - id: MNJNJBIH_00162
    - name: ''
  - !!omap
    - id: MNJNJBIH_01078
    - name: ''
  - !!omap
    - id: MNJNJBIH_02724
    - name: ''
  - !!omap
    - id: MNJNJBIH_01842
    - name: ''
  - !!omap
    - id: MNJNJBIH_00223
    - name: ''
  - !!omap
    - id: MNJNJBIH_02599
    - name: ''
  - !!omap
    - id: MNJNJBIH_01019
    - name: ''
  - !!omap
    - id: MNJNJBIH_04504
    - name: ''
  - !!omap
    - id: MNJNJBIH_03204
    - name: ''
  - !!omap
    - id: MNJNJBIH_02001
    - name: ''
  - !!omap
    - id: MNJNJBIH_00132
    - name: ''
  - !!omap
    - id: MNJNJBIH_03036
    - name: ''
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