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},
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"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__GAT1_LBR",
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},
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"gene_reaction_rule":"BIOMASS",
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"sbo":"SBO:0000176"
}
},
{
"id":"EX___LactoPanGEM__apoacp_c",
"name":"",
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},
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"gene_reaction_rule":"DEMAND",
"subsystem":"Intracellular source/sink",
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"biggr":"EX___LactoPanGEM__apoacp_c",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__udcp_c",
"name":"",
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},
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"gene_reaction_rule":"DEMAND",
"subsystem":"Intracellular source/sink",
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"biggr":"EX___LactoPanGEM__udcp_c",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__trna_c",
"name":"",
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},
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"gene_reaction_rule":"DEMAND",
"subsystem":"Intracellular source/sink",
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"biggr":"EX___LactoPanGEM__trna_c",
"sbo":"SBO:0000627"
}
},
{
"id":"COt",
"name":"CO transporter via diffusion",
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},
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"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"COt:2",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__DAD5DIF",
"name":"",
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"dad_5_e":-1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__DAD5DIF",
"sbo":"SBO:0000655"
}
},
{
"id":"BTDt_RR",
"name":"R__R_R__butanediol_transport",
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"btd_RR_e":1.0
},
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"gene_reaction_rule":"Diffusion",
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"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__CBLTDe",
"name":"Release of B12 by SIMPle Diffusion",
"metabolites":{
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"__LactoPanGEM__adocbl_e":1.0
},
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"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__CBLTDe",
"sbo":"SBO:0000655"
}
},
{
"id":"CO2t",
"name":"CO2 transporter via diffusion",
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"co2_e":-1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"CO2t",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__DDCAt",
"name":"Fatty acid (dodecanoate) transport via facilitated irreversible diffusion",
"metabolites":{
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"__LactoPanGEM__ddca_e":-1.0
},
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"gene_reaction_rule":"Diffusion",
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"biggr":"__LactoPanGEM__DDCAt",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__FORt",
"name":"formate transport via diffusion",
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"__LactoPanGEM__for_e":-1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__FORt",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__FUMt",
"name":"Fumarate transport via diffusion",
"metabolites":{
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"__LactoPanGEM__fum_e":1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__FUMt",
"sbo":"SBO:0000655"
}
},
{
"id":"H2Ot",
"name":"H2O transport via diffusion",
"metabolites":{
"h2o_c":1.0,
"h2o_e":-1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"H2Ot",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__H2St",
"name":"h2s transport (diffusion)",
"metabolites":{
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"__LactoPanGEM__h2s_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__H2St",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__HDCAtr",
"name":"Fatty Acid Transport via Diffusion",
"metabolites":{
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"__LactoPanGEM__hdca_e":-1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__HDCAtr",
"sbo":"SBO:0000655"
}
},
{
"id":"INSt",
"name":"Inosine transport (diffusion)",
"metabolites":{
"ins_c":1.0,
"ins_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"INSt",
"sbo":"SBO:0000655"
}
},
{
"id":"O2t",
"name":"O2 transport in via diffusion",
"metabolites":{
"o2_c":1.0,
"o2_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"O2t",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__OCDCAtr",
"name":"Fatty Acid Transport via Diffusion",
"metabolites":{
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"__LactoPanGEM__ocdca_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__OCDCAtr",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__OCDCEAtr",
"name":"Fatty Acid Transport via Diffusion",
"metabolites":{
"__LactoPanGEM__ocdcea_c":1.0,
"__LactoPanGEM__ocdcea_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__OCDCEAtr",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__ORNt",
"name":"ornithine transport via diffusion (extracellular to periplasm)",
"metabolites":{
"__LactoPanGEM__orn__L_c":1.0,
"__LactoPanGEM__orn__L_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__ORNt",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__PYDAMtr",
"name":"Transport of Pyridoxamine via Diffusion",
"metabolites":{
"__LactoPanGEM__pydam_c":1.0,
"__LactoPanGEM__pydam_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__PYDAMtr",
"sbo":"SBO:0000655"
}
},
{
"id":"PYDXtr",
"name":"pyridoxal transport via diffusion",
"metabolites":{
"pydx_c":1.0,
"pydx_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"PYDXtr",
"sbo":"SBO:0000655"
}
},
{
"id":"PYDXNtr",
"name":"pyridoxine transport via diffusion",
"metabolites":{
"pydxn_c":1.0,
"pydxn_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"PYDXNtr",
"sbo":"SBO:0000655"
}
},
{
"id":"UREAt",
"name":"Urea transport via facilitate diffusion",
"metabolites":{
"urea_c":1.0,
"urea_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"UREAt",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__LIPDIF",
"name":"Lipoate diffusion",
"metabolites":{
"__LactoPanGEM__lipoate_c":1.0,
"__LactoPanGEM__lipoate_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__LIPDIF",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__OXAte",
"name":"Oxalate secretion by diffusion",
"metabolites":{
"__LactoPanGEM__oxa_c":-1.0,
"__LactoPanGEM__oxa_e":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Diffusion",
"annotation":{
"biggr":"__LactoPanGEM__OXAte",
"sbo":"SBO:0000655"
}
},
{
"id":"EX___LactoPanGEM__lipoate_e",
"name":"lipoate exchange",
"metabolites":{
"__LactoPanGEM__lipoate_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__lipoate_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__orot_e",
"name":"orotate exchange",
"metabolites":{
"__LactoPanGEM__orot_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__orot_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_co_e",
"name":"Carbon monoxide exchange",
"metabolites":{
"co_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_co_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_dad_5_e",
"name":"Exchange of 5'-deoxyadenosine.",
"metabolites":{
"dad_5_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_dad_5_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__pydam_e",
"name":"exchange reaction for Pyridoxamine",
"metabolites":{
"__LactoPanGEM__pydam_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__pydam_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_pydx_e",
"name":"Exchange of pyridoxal.",
"metabolites":{
"pydx_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_pydx_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_pydxn_e",
"name":"Exchange of pyridoxine.",
"metabolites":{
"pydxn_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_pydxn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_12ppd__S_e",
"name":"Exchange of (S)-propane-1,2-diol.",
"metabolites":{
"12ppd__S_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_12ppd__S_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_acgam_e",
"name":"Exchange of N-acetyl-D-glucosamine.",
"metabolites":{
"acgam_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_acgam_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__acnam_e",
"name":"N-Acetylneuraminate exchange",
"metabolites":{
"__LactoPanGEM__acnam_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__acnam_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_fuc__L_e",
"name":"Exchange of alpha-L-fucose.",
"metabolites":{
"fuc__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_fuc__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_gal_e",
"name":"Exchange of alpha-D-galactose.",
"metabolites":{
"gal_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_gal_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__h_e",
"name":"exchange reaction for proton",
"metabolites":{
"__LactoPanGEM__h_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__h_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_h2o_e",
"name":"Exchange of water.",
"metabolites":{
"h2o_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_h2o_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__lac__L_e",
"name":"L-Lactate exchange",
"metabolites":{
"__LactoPanGEM__lac__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__lac__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_lald__L_e",
"name":"Exchange of (S)-lactaldehyde.",
"metabolites":{
"lald__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_lald__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_12dgr180_e",
"name":"Exchange of 1,2-dioctadecanoyl-sn-glycerol.",
"metabolites":{
"12dgr180_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_12dgr180_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_13ppd_e",
"name":"Exchange of propane-1,3-diol.",
"metabolites":{
"13ppd_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_13ppd_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__2ddglcn_e",
"name":"2-Dehydro-3-deoxy-D-gluconate exchange",
"metabolites":{
"__LactoPanGEM__2ddglcn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__2ddglcn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_2dmmq8_e",
"name":"Exchange of 2-demethylmenaquinone-8.",
"metabolites":{
"2dmmq8_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_2dmmq8_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__2obut_e",
"name":"2-Oxobutanoate exchange",
"metabolites":{
"__LactoPanGEM__2obut_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__2obut_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__34dhpha_e",
"name":"(3,4-dihydroxyphenyl)acetate exchange",
"metabolites":{
"__LactoPanGEM__34dhpha_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__34dhpha_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_34dhphe_e",
"name":"Exchange of L-dopa zwitterion.",
"metabolites":{
"34dhphe_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_34dhphe_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__3mop_e",
"name":"Exchange of 3-methyl-2-oxopentanoate",
"metabolites":{
"__LactoPanGEM__3mop_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__3mop_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_4abut_e",
"name":"Exchange of gamma-aminobutyric acid zwitterion.",
"metabolites":{
"4abut_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_4abut_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__4abz_e",
"name":"4 Aminobenzoate exchange",
"metabolites":{
"__LactoPanGEM__4abz_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__4abz_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__4hbz_e",
"name":"4-Hydroxybenzoate exchange",
"metabolites":{
"__LactoPanGEM__4hbz_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__4hbz_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_5htrp_e",
"name":"_5-Hydroxy-L-tryptophan exchange",
"metabolites":{
"5htrp_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_5htrp_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__5mthf_e",
"name":"exchange reaction for 5-Methyltetrahydrofolate",
"metabolites":{
"__LactoPanGEM__5mthf_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__5mthf_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ac_e",
"name":"Acetate exchange",
"metabolites":{
"__LactoPanGEM__ac_e":-1.0
},
"lower_bound":-2.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ac_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_acald_e",
"name":"Exchange of acetaldehyde.",
"metabolites":{
"acald_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_acald_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ade_e",
"name":"Exchange of adenine.",
"metabolites":{
"ade_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ade_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_adn_e",
"name":"Exchange of adenosine.",
"metabolites":{
"adn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_adn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__adocbl_e",
"name":"Adenosylcobalamin exchange",
"metabolites":{
"__LactoPanGEM__adocbl_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__adocbl_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ahcys_e",
"name":"Exchange of S-adenosyl-L-homocysteine zwitterion.",
"metabolites":{
"ahcys_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ahcys_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__akg_e",
"name":"2-Oxoglutarate exchange",
"metabolites":{
"__LactoPanGEM__akg_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__akg_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ala__D_e",
"name":"Exchange of D-alanine zwitterion.",
"metabolites":{
"ala__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ala__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ala__L_e",
"name":"Exchange of L-alanine zwitterion.",
"metabolites":{
"ala__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ala__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__alltn_e",
"name":"Allantoin exchange",
"metabolites":{
"__LactoPanGEM__alltn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__alltn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__amp_e",
"name":"AMP exchange",
"metabolites":{
"__LactoPanGEM__amp_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__amp_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_arab__L_e",
"name":"L-Arabinose exchange",
"metabolites":{
"arab__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_arab__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_arbt_e",
"name":"Exchange of hydroquinone O-beta-D-glucopyranoside.",
"metabolites":{
"arbt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_arbt_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__arg__L_e",
"name":"L-Arginine exchange",
"metabolites":{
"__LactoPanGEM__arg__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__arg__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__arsenb_e",
"name":"Arsenobetaine exchange",
"metabolites":{
"__LactoPanGEM__arsenb_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__arsenb_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_asn__L_e",
"name":"Exchange of L-asparagine zwitterion.",
"metabolites":{
"asn__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_asn__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__asp__L_e",
"name":"L-Aspartate exchange",
"metabolites":{
"__LactoPanGEM__asp__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__asp__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_btd_RR_e",
"name":"Exchange of (R,R)-butane-2,3-diol.",
"metabolites":{
"btd_RR_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_btd_RR_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__btn_e",
"name":"Biotin exchange",
"metabolites":{
"__LactoPanGEM__btn_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__btn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__butso3_e",
"name":"butanesulfonate exchange",
"metabolites":{
"__LactoPanGEM__butso3_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__butso3_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__C02528_e",
"name":"chenodeoxycholate exchange",
"metabolites":{
"__LactoPanGEM__C02528_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__C02528_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ca2_e",
"name":"Calcium exchange",
"metabolites":{
"__LactoPanGEM__ca2_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ca2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__cd2_e",
"name":"Cadmium exchange",
"metabolites":{
"__LactoPanGEM__cd2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__cd2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_cellb_e",
"name":"Exchange of cellobiose.",
"metabolites":{
"cellb_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_cellb_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_cgly_e",
"name":"Exchange of L-cysteinylglycine zwitterion.",
"metabolites":{
"cgly_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_cgly_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__chol_e",
"name":"exchange reaction for Choline",
"metabolites":{
"__LactoPanGEM__chol_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__chol_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__cholate_e",
"name":"exchange reaction for cholate",
"metabolites":{
"__LactoPanGEM__cholate_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__cholate_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_chols_e",
"name":"Exchange of choline sulfate.",
"metabolites":{
"chols_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_chols_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__cit_e",
"name":"Citrate exchange",
"metabolites":{
"__LactoPanGEM__cit_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__cit_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__cl_e",
"name":"exchange reaction for Chloride",
"metabolites":{
"__LactoPanGEM__cl_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__cl_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_co2_e",
"name":"Exchange of carbon dioxide.",
"metabolites":{
"co2_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_co2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__cobalt2_e",
"name":"Co2+ exchange",
"metabolites":{
"__LactoPanGEM__cobalt2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__cobalt2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_csn_e",
"name":"Exchange of cytosine.",
"metabolites":{
"csn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_csn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ctbt_e",
"name":"Crotonobetaine exchange",
"metabolites":{
"__LactoPanGEM__ctbt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ctbt_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__cu2_e",
"name":"Cu2+ exchange",
"metabolites":{
"__LactoPanGEM__cu2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__cu2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_cys__L_e",
"name":"Exchange of L-cysteine zwitterion.",
"metabolites":{
"cys__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_cys__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_cytd_e",
"name":"Exchange of cytidine.",
"metabolites":{
"cytd_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_cytd_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_dad_2_e",
"name":"Exchange of 2'-deoxyadenosine.",
"metabolites":{
"dad_2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_dad_2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_dcyt_e",
"name":"Exchange of 2'-deoxycytidine.",
"metabolites":{
"dcyt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_dcyt_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ddca_e",
"name":"laurate exchange",
"metabolites":{
"__LactoPanGEM__ddca_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ddca_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__dextrin_e",
"name":"Dextrin exchange",
"metabolites":{
"__LactoPanGEM__dextrin_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__dextrin_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_dgsn_e",
"name":"Exchange of 2'-deoxyguanosine.",
"metabolites":{
"dgsn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_dgsn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_diact_e",
"name":"Exchange of butane-2,3-dione.",
"metabolites":{
"diact_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_diact_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_din_e",
"name":"Exchange of 2'-deoxyinosine.",
"metabolites":{
"din_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_din_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__dopa_e",
"name":"Dopamine exchange",
"metabolites":{
"__LactoPanGEM__dopa_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__dopa_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__dpcoa_e",
"name":"exchange reaction for dpcoa",
"metabolites":{
"__LactoPanGEM__dpcoa_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__dpcoa_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_drib_e",
"name":"Exchange of 2-deoxy-D-ribofuranose.",
"metabolites":{
"drib_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_drib_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__etha_e",
"name":"Ethanolamine exchange",
"metabolites":{
"__LactoPanGEM__etha_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__etha_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__eths_e",
"name":"ethanesulfonate exchange",
"metabolites":{
"__LactoPanGEM__eths_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__eths_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_etoh_e",
"name":"Exchange of ethanol.",
"metabolites":{
"etoh_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_etoh_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__fe3_e",
"name":"Fe3+ exchange",
"metabolites":{
"__LactoPanGEM__fe3_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__fe3_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__fecrm_e",
"name":"Ferrichrome exchange",
"metabolites":{
"__LactoPanGEM__fecrm_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__fecrm_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__fol_e",
"name":"exchange reaction for Folate",
"metabolites":{
"__LactoPanGEM__fol_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__fol_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__for_e",
"name":"Formate exchange",
"metabolites":{
"__LactoPanGEM__for_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__for_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_fru_e",
"name":"Exchange of beta-D-fructofuranose.",
"metabolites":{
"fru_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_fru_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__fum_e",
"name":"exchange reaction for fumarate",
"metabolites":{
"__LactoPanGEM__fum_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__fum_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_galt_e",
"name":"Exchange of galactitol.",
"metabolites":{
"galt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_galt_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__galur_e",
"name":"D-Galacturonate exchange",
"metabolites":{
"__LactoPanGEM__galur_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__galur_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gam_e",
"name":"exchange reaction for D-Glucosamine",
"metabolites":{
"__LactoPanGEM__gam_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gam_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_gcald_e",
"name":"R_Glycolaldehyde_exchange",
"metabolites":{
"gcald_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_gcald_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gchola_e",
"name":"Glycocholate exchange",
"metabolites":{
"__LactoPanGEM__gchola_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gchola_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_glc__D_e",
"name":"Exchange of D-glucopyranose.",
"metabolites":{
"glc__D_e":-1.0
},
"lower_bound":-20.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_glc__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__glcn_e",
"name":"D-Gluconate exchange",
"metabolites":{
"__LactoPanGEM__glcn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__glcn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__glcur_e",
"name":"D-glucuronate exchange",
"metabolites":{
"__LactoPanGEM__glcur_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__glcur_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_gln__L_e",
"name":"Exchange of L-glutamine zwitterion.",
"metabolites":{
"gln__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_gln__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__glu__L_e",
"name":"L-Glutamate exchange",
"metabolites":{
"__LactoPanGEM__glu__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__glu__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_gly_e",
"name":"Exchange of glycine zwitterion.",
"metabolites":{
"gly_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_gly_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_glyb_e",
"name":"Exchange of glycine betaine.",
"metabolites":{
"glyb_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_glyb_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_glyc_e",
"name":"Exchange of glycerol.",
"metabolites":{
"glyc_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_glyc_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__glyclt_e",
"name":"Glycolate exchange",
"metabolites":{
"__LactoPanGEM__glyclt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__glyclt_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_gsn_e",
"name":"Exchange of guanosine.",
"metabolites":{
"gsn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_gsn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gthox_e",
"name":"Oxidized glutathione exchange",
"metabolites":{
"__LactoPanGEM__gthox_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gthox_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gthrd_e",
"name":"Reduced glutathione exchange",
"metabolites":{
"__LactoPanGEM__gthrd_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gthrd_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_gua_e",
"name":"Exchange of guanine.",
"metabolites":{
"gua_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_gua_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_h2_e",
"name":"Exchange of dihydrogen.",
"metabolites":{
"h2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_h2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__h2s_e",
"name":"Hydrogen sulfide exchange",
"metabolites":{
"__LactoPanGEM__h2s_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__h2s_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__hdca_e",
"name":"Hexadecanoate (n-C16:0) exchange",
"metabolites":{
"__LactoPanGEM__hdca_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__hdca_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__hexs_e",
"name":"Hexanesulfonate exchange",
"metabolites":{
"__LactoPanGEM__hexs_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__hexs_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__hg2_e",
"name":"Hg2+ exchange",
"metabolites":{
"__LactoPanGEM__hg2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__hg2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_his__L_e",
"name":"Exchange of L-histidine zwitterion.",
"metabolites":{
"his__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_his__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__hista_e",
"name":"Histamine exchange",
"metabolites":{
"__LactoPanGEM__hista_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__hista_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_hxan_e",
"name":"Exchange of hypoxanthine.",
"metabolites":{
"hxan_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_hxan_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ile__L_e",
"name":"Exchange of L-isoleucine zwitterion.",
"metabolites":{
"ile__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ile__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ind3ac_e",
"name":"Indole-3-acetate exchange",
"metabolites":{
"__LactoPanGEM__ind3ac_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ind3ac_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ascb__L_e",
"name":"L-Ascorbate exchange",
"metabolites":{
"ascb__L_e":-1.0
},
"lower_bound":-0.5,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ascb__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_indole_e",
"name":"Indole exchange",
"metabolites":{
"indole_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_indole_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_inost_e",
"name":"Exchange of myo-inositol.",
"metabolites":{
"inost_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_inost_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ins_e",
"name":"Exchange of inosine.",
"metabolites":{
"ins_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ins_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__k_e",
"name":"K+ exchange",
"metabolites":{
"__LactoPanGEM__k_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__k_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__lac__D_e",
"name":"D-lactate exchange",
"metabolites":{
"__LactoPanGEM__lac__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__lac__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_lcts_e",
"name":"Exchange of lactose.",
"metabolites":{
"lcts_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_lcts_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__Lcyst_e",
"name":"L-cysteate exchange",
"metabolites":{
"__LactoPanGEM__Lcyst_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__Lcyst_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_leu__L_e",
"name":"Exchange of L-leucine zwitterion.",
"metabolites":{
"leu__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_leu__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__lys__L_e",
"name":"L-Lysine exchange",
"metabolites":{
"__LactoPanGEM__lys__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__lys__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__mal__L_e",
"name":"Exchange of L-malate",
"metabolites":{
"__LactoPanGEM__mal__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__mal__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_malt_e",
"name":"Exchange of maltose.",
"metabolites":{
"malt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_malt_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__malthx_e",
"name":"Maltohexaose exchange",
"metabolites":{
"__LactoPanGEM__malthx_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__malthx_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__malttr_e",
"name":"Maltotriose exchange",
"metabolites":{
"__LactoPanGEM__malttr_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__malttr_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_man_e",
"name":"Exchange of D-mannopyranose.",
"metabolites":{
"man_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_man_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_melib_e",
"name":"Exchange of melibiose.",
"metabolites":{
"melib_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_melib_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_met__D_e",
"name":"Exchange of D-methionine zwitterion.",
"metabolites":{
"met__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_met__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_met__L_e",
"name":"Exchange of L-methionine zwitterion.",
"metabolites":{
"met__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_met__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_metsox_S__L_e",
"name":"Exchange of L-methionine (S)-S-oxide zwitterion.",
"metabolites":{
"metsox_S__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_metsox_S__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__mn2_e",
"name":"Mn2+ exchange",
"metabolites":{
"__LactoPanGEM__mn2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__mn2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_mnl_e",
"name":"Exchange of D-mannitol.",
"metabolites":{
"mnl_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_mnl_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__mops_e",
"name":"3-(n-Morpholino)Propanesulfonic Acid exchange",
"metabolites":{
"__LactoPanGEM__mops_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__mops_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_mqn8_e",
"name":"Exchange of menaquinone-8.",
"metabolites":{
"mqn8_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_mqn8_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__mso3_e",
"name":"methanesulfonate exchange",
"metabolites":{
"__LactoPanGEM__mso3_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__mso3_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_n2o_e",
"name":"Exchange of dinitrogen oxide.",
"metabolites":{
"n2o_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_n2o_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__nac_e",
"name":"Nicotinate exchange",
"metabolites":{
"__LactoPanGEM__nac_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__nac_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ncam_e",
"name":"Exchange of nicotinamide.",
"metabolites":{
"ncam_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ncam_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__nh4_e",
"name":"Ammonia exchange",
"metabolites":{
"__LactoPanGEM__nh4_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__nh4_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ni2_e",
"name":"Ni2+ exchange",
"metabolites":{
"__LactoPanGEM__ni2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ni2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__nmn_e",
"name":"NMN exchange",
"metabolites":{
"__LactoPanGEM__nmn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__nmn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_no_e",
"name":"Exchange of nitric oxide.",
"metabolites":{
"no_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_no_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__no2_e",
"name":"Nitrite exchange",
"metabolites":{
"__LactoPanGEM__no2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__no2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__no3_e",
"name":"Nitrate exchange",
"metabolites":{
"__LactoPanGEM__no3_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__no3_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_o2_e",
"name":"Exchange of dioxygen.",
"metabolites":{
"o2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_o2_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ocdcea_e",
"name":"octadecenoate (n-C18:1) exchange",
"metabolites":{
"__LactoPanGEM__ocdcea_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ocdcea_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__orn__L_e",
"name":"Ornithine exchange",
"metabolites":{
"__LactoPanGEM__orn__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__orn__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__oxa_e",
"name":"Oxalate exchange",
"metabolites":{
"__LactoPanGEM__oxa_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__oxa_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__pb_e",
"name":"Lead exchange",
"metabolites":{
"__LactoPanGEM__pb_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__pb_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_phe__L_e",
"name":"Exchange of L-phenylalanine zwitterion.",
"metabolites":{
"phe__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_phe__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__pheme_e",
"name":"exchange reaction for heme",
"metabolites":{
"__LactoPanGEM__pheme_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__pheme_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__pi_e",
"name":"Phosphate exchange",
"metabolites":{
"__LactoPanGEM__pi_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__pi_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__pnto__R_e",
"name":"(R)-Pantothenate exchange",
"metabolites":{
"__LactoPanGEM__pnto__R_e":-1.0
},
"lower_bound":-0.5,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__pnto__R_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__prpnte_e",
"name":"Propionate exchange",
"metabolites":{
"__LactoPanGEM__prpnte_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__prpnte_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ppi_e",
"name":"exchange reaction for ppi",
"metabolites":{
"__LactoPanGEM__ppi_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ppi_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_pro__L_e",
"name":"Exchange of L-proline zwitterion.",
"metabolites":{
"pro__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_pro__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ptrc_e",
"name":"Putrescine exchange",
"metabolites":{
"__LactoPanGEM__ptrc_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ptrc_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_q8_e",
"name":"Exchange of ubiquinone-8.",
"metabolites":{
"q8_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_q8_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_raffin_e",
"name":"Exchange of raffinose.",
"metabolites":{
"raffin_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_raffin_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_rib__D_e",
"name":"Exchange of D-ribofuranose.",
"metabolites":{
"rib__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_rib__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ribflv_e",
"name":"exchange reaction for Riboflavin",
"metabolites":{
"__LactoPanGEM__ribflv_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ribflv_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_rmn_e",
"name":"Exchange of L-rhamnopyranose.",
"metabolites":{
"rmn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_rmn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_salcn_e",
"name":"Exchange of salicin.",
"metabolites":{
"salcn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_salcn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_sbt__D_e",
"name":"Exchange of D-glucitol.",
"metabolites":{
"sbt__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_sbt__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ser__D_e",
"name":"Exchange of D-serine zwitterion.",
"metabolites":{
"ser__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ser__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ser__L_e",
"name":"Exchange of L-serine zwitterion.",
"metabolites":{
"ser__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ser__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__sheme_e",
"name":"Siroheme exchange",
"metabolites":{
"__LactoPanGEM__sheme_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__sheme_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__so4_e",
"name":"Sulfate exchange",
"metabolites":{
"__LactoPanGEM__so4_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__so4_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__spmd_e",
"name":"Exchange of spermidine(3+)",
"metabolites":{
"__LactoPanGEM__spmd_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__spmd_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__srtn_e",
"name":"Serotonin exchange",
"metabolites":{
"__LactoPanGEM__srtn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__srtn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__succ_e",
"name":"Succinate exchange",
"metabolites":{
"__LactoPanGEM__succ_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__succ_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_sucr_e",
"name":"Exchange of sucrose.",
"metabolites":{
"sucr_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_sucr_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__sulfac_e",
"name":"sulfoacetate exchange",
"metabolites":{
"__LactoPanGEM__sulfac_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__sulfac_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_taur_e",
"name":"Exchange of taurine zwitterion.",
"metabolites":{
"taur_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_taur_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__tchola_e",
"name":"Taurocholic acid exchange",
"metabolites":{
"__LactoPanGEM__tchola_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__tchola_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__tdchola_e",
"name":"taurochenodeoxycholate exchange",
"metabolites":{
"__LactoPanGEM__tdchola_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__tdchola_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__thf_e",
"name":"5,6,7,8-Tetrahydrofolate exchange",
"metabolites":{
"__LactoPanGEM__thf_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__thf_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__thm_e",
"name":"exchange reaction for Thiamin",
"metabolites":{
"__LactoPanGEM__thm_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__thm_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_thr__L_e",
"name":"Exchange of L-threonine zwitterion.",
"metabolites":{
"thr__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_thr__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_thymd_e",
"name":"Exchange of thymidine.",
"metabolites":{
"thymd_e":-1.0
},
"lower_bound":-0.1,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_thymd_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_tre_e",
"name":"Exchange of alpha,alpha-trehalose.",
"metabolites":{
"tre_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_tre_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_trp__L_e",
"name":"Exchange of L-tryptophan zwitterion.",
"metabolites":{
"trp__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_trp__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__trypta_e",
"name":"Tryptamine exchange",
"metabolites":{
"__LactoPanGEM__trypta_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__trypta_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_tsul_e",
"name":"Thiosulfate exchange",
"metabolites":{
"tsul_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_tsul_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ttdca_e",
"name":"exchange reaction for tetradecanoate (n-C14:0)",
"metabolites":{
"__LactoPanGEM__ttdca_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ttdca_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__tym_e",
"name":"Tyramine exchange",
"metabolites":{
"__LactoPanGEM__tym_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__tym_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_tyr__L_e",
"name":"Exchange of L-tyrosine zwitterion.",
"metabolites":{
"tyr__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_tyr__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_ura_e",
"name":"Exchange of uracil.",
"metabolites":{
"ura_e":-1.0
},
"lower_bound":-2.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_ura_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_urea_e",
"name":"Exchange of urea.",
"metabolites":{
"urea_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_urea_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_uri_e",
"name":"Exchange of uridine.",
"metabolites":{
"uri_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_uri_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_val__L_e",
"name":"Exchange of L-valine zwitterion.",
"metabolites":{
"val__L_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_val__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_xyl__D_e",
"name":"Exchange of D-xylopyranose.",
"metabolites":{
"xyl__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_xyl__D_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__na_e",
"name":"exchange reaction for Sodium",
"metabolites":{
"__LactoPanGEM__na_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__na_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_actn__S_e",
"name":"Exchange of (S)-acetoin.",
"metabolites":{
"actn__S_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_actn__S_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ala_L_asp__L_e",
"name":"L-alanyl-L-aspartate exchange",
"metabolites":{
"__LactoPanGEM__ala_L_asp__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ala_L_asp__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ala_gln_e",
"name":"L-alanyl-L-glutamine exchange",
"metabolites":{
"__LactoPanGEM__ala_gln_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ala_gln_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ala_L_glu__L_e",
"name":"L-alanyl-L-glutamate exchange",
"metabolites":{
"__LactoPanGEM__ala_L_glu__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ala_L_glu__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_L_alagly_e",
"name":"Exchange of Ala-Gly zwitterion.",
"metabolites":{
"L_alagly_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_L_alagly_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ala_his_e",
"name":"L-alanyl-L-histidine exchange",
"metabolites":{
"__LactoPanGEM__ala_his_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ala_his_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ala_leu_e",
"name":"L-alanyl-L-leucine exchange",
"metabolites":{
"__LactoPanGEM__ala_leu_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ala_leu_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__ala_L_thr__L_e",
"name":"L-alanyl-L-threonine exchange",
"metabolites":{
"__LactoPanGEM__ala_L_thr__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__ala_L_thr__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__carn_e",
"name":"exchange reaction for L-Carnitine",
"metabolites":{
"__LactoPanGEM__carn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__carn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_asn__L_e",
"name":"Glycyl-L-asparagine exchange",
"metabolites":{
"__LactoPanGEM__gly_asn__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_asn__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_asp__L_e",
"name":"Glycyl-L-aspartate exchange",
"metabolites":{
"__LactoPanGEM__gly_asp__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_asp__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_cys_e",
"name":"Gly-Cys exchange reaction",
"metabolites":{
"__LactoPanGEM__gly_cys_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_cys_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_gln_e",
"name":"Glycyl-L-glutamine exchange",
"metabolites":{
"__LactoPanGEM__gly_gln_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_gln_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_glu__L_e",
"name":"Glycyl-L-glutamate exchange",
"metabolites":{
"__LactoPanGEM__gly_glu__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_glu__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_leu_e",
"name":"Glycylleucine exchange",
"metabolites":{
"__LactoPanGEM__gly_leu_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_leu_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_met_e",
"name":"Glycyl-L-methionine exchange",
"metabolites":{
"__LactoPanGEM__gly_met_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_met_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_phe_e",
"name":"exchange reaction for glycylphenylalaine",
"metabolites":{
"__LactoPanGEM__gly_phe_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_phe_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_pro__L_e",
"name":"Glycylproline exchange",
"metabolites":{
"__LactoPanGEM__gly_pro__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_pro__L_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__gly_tyr_e",
"name":"Glycyl-L-tyrosine exchange",
"metabolites":{
"__LactoPanGEM__gly_tyr_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__gly_tyr_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__isetac_e",
"name":"Isethionic acid exchange",
"metabolites":{
"__LactoPanGEM__isetac_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__isetac_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__mnt_c",
"name":"Mannotriose exchange",
"metabolites":{
"__LactoPanGEM__mnt_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Intracellular demand",
"annotation":{
"biggr":"EX___LactoPanGEM__mnt_c",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__metox__R_e",
"name":"L-methionine-R-sulfoxide exchange",
"metabolites":{
"__LactoPanGEM__metox__R_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__metox__R_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__mg_e",
"name":"Mg exchange",
"metabolites":{
"__LactoPanGEM__mg_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__mg_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__Ser_Thr_e",
"name":"protein-linked serine or threonine residue (O-glycosylation site) exchange",
"metabolites":{
"__LactoPanGEM__Ser_Thr_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__Ser_Thr_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_stys_e",
"name":"Exchange of stachyose.",
"metabolites":{
"stys_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_stys_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX___LactoPanGEM__zn_e",
"name":"Zinc exchange",
"metabolites":{
"__LactoPanGEM__zn_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX___LactoPanGEM__zn_e",
"sbo":"SBO:0000627"
}
},
{
"id":"EX_xan_e",
"name":"Xanthine exchange",
"metabolites":{
"xan_e":-1.0
},
"lower_bound":-1.0,
"upper_bound":1000.0,
"gene_reaction_rule":"EXCHANGE",
"subsystem":"Extracellular exchange",
"annotation":{
"biggr":"EX_xan_e",
"sbo":"SBO:0000627"
}
},
{
"id":"__LactoPanGEM__ACONIs",
"name":"Aconitate isomerase (spontaneous)",
"metabolites":{
"__LactoPanGEM__acon_c":1.0,
"acon_T_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__ACONIs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__SPTETDH",
"name":"Spontaneous Reaction  tethdp dehydration",
"metabolites":{
"__LactoPanGEM__l2am6ox_c":-1.0,
"__LactoPanGEM__thdp_c":1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__SPTETDH",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__FALGTHLs",
"name":"Formaldehyde glutathione ligase (spontaneous)",
"metabolites":{
"__LactoPanGEM__gthrd_c":-1.0,
"__LactoPanGEM__hmgth_c":1.0,
"fald_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__FALGTHLs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__SPPDHY",
"name":"L-4-Hydroxyglutamate semialdehyde hydration (Spontaneous Reaction )",
"metabolites":{
"4hglusa_c":1.0,
"__LactoPanGEM__1p3h5c_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__SPPDHY",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__DHAMU",
"name":"Dehydroalanine mutarotation (Spontaneous Reaction )",
"metabolites":{
"__LactoPanGEM__dehala_c":-1.0,
"__LactoPanGEM__imiprnte_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__DHAMU",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__13PPDt",
"name":"1,3-propanediol transporter via diffusion",
"metabolites":{
"13ppd_c":1.0,
"13ppd_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__13PPDt",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__ACTNdiff",
"name":"S acetoin diffusion",
"metabolites":{
"actn__S_c":1.0,
"actn__S_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__ACTNdiff",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__ATPHs",
"name":"ATP amine hydrolysis (spontaneous)",
"metabolites":{
"__LactoPanGEM__atp_c":-1.0,
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__itp_c":1.0,
"__LactoPanGEM__nh4_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__ATPHs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__SPIADC",
"name":"Indole-3-acetate decarboxylation (Spontaneous Reaction )",
"metabolites":{
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__ind3ac_c":-1.0,
"__LactoPanGEM__mdoind_c":1.0,
"co2_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__SPIADC",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__G5SADs",
"name":"L-glutamate 5-semialdehyde dehydratase (Spontaneous Reaction )",
"metabolites":{
"__LactoPanGEM__h_c":1.0,
"__LactoPanGEM__pyr5carb_c":1.0,
"glusemald_c":-1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__G5SADs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__CBMD",
"name":"carbamate deaminase(Spontaneous Reaction )",
"metabolites":{
"__LactoPanGEM__cbm_c":-1.0,
"__LactoPanGEM__h_c":-2.0,
"__LactoPanGEM__nh4_c":1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__CBMD",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__SPPD",
"name":"Spontaneous Reaction  pyrroline dehydration",
"metabolites":{
"__LactoPanGEM__4abutn_c":-1.0,
"__LactoPanGEM__pyrln_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__SPPD",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__DATPHs",
"name":"DATP amine hydrolysis (spontaneous)",
"metabolites":{
"__LactoPanGEM__datp_c":-1.0,
"__LactoPanGEM__ditp_c":1.0,
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__nh4_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__DATPHs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__DHPTDCs",
"name":"4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)",
"metabolites":{
"__LactoPanGEM__h_c":1.0,
"dhptd_c":-1.0,
"h2o_c":1.0,
"hmfurn_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__DHPTDCs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__FECRMexs",
"name":"Ferrichrome Fe(III)-loading reaction (spontaneous)",
"metabolites":{
"__LactoPanGEM__fe3_c":-1.0,
"__LactoPanGEM__fecrm_c":1.0,
"__LactoPanGEM__fecrm_un_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__FECRMexs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__FEOXAMexs",
"name":"Ferroxamine Fe3-loading reaction (spontaneous)",
"metabolites":{
"__LactoPanGEM__fe3_c":-1.0,
"__LactoPanGEM__feoxam_c":1.0,
"__LactoPanGEM__feoxam_un_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__FEOXAMexs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__GTPHs",
"name":"GTP amine hydrolysis (spontaneous)",
"metabolites":{
"__LactoPanGEM__gtp_c":-1.0,
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__nh4_c":1.0,
"__LactoPanGEM__xtp_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__GTPHs",
"sbo":"SBO:0000176"
}
},
{
"id":"METOX1s",
"name":"methionine oxidation (spontaneous)",
"metabolites":{
"h2o2_c":-1.0,
"h2o_c":1.0,
"met__L_c":-1.0,
"metsox_S__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"METOX1s",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__ALACDC",
"name":"acetolactate decarboxylation (Spontaneous Reaction )",
"metabolites":{
"__LactoPanGEM__alac__S_c:0":-1.0,
"__LactoPanGEM__h_c":2.0,
"__LactoPanGEM__nad_c":-1.0,
"__LactoPanGEM__nadh_c":1.0,
"co2_c":1.0,
"diact_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__ALACDC",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__AOBUTDs",
"name":"L-2-amino-3-oxobutanoate decarboxylation (spontaneous)",
"metabolites":{
"2aobut_c":-1.0,
"__LactoPanGEM__aact_c":1.0,
"__LactoPanGEM__h_c":-1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__AOBUTDs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__AOBUTDs:2",
"name":"L-2-amino-3-oxobutanoate decarboxylation (spontaneous)",
"metabolites":{
"2aobut_c":-1.0,
"__LactoPanGEM__aact_c":1.0,
"__LactoPanGEM__h_c":-1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"spontaneous",
"annotation":{
"biggr":"__LactoPanGEM__AOBUTDs",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__GLUDy",
"name":"Glutamate dehydrogenase (NADP)",
"metabolites":{
"__LactoPanGEM__akg_c":1.0,
"__LactoPanGEM__glu__L_c":-1.0,
"__LactoPanGEM__h_c":1.0,
"__LactoPanGEM__nadp_c":-1.0,
"__LactoPanGEM__nadph_c":1.0,
"__LactoPanGEM__nh4_c":1.0,
"h2o_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__GLUDy",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__NDPK3",
"name":"Nucleoside-Diphosphate Kinase (ATP:CDP)",
"metabolites":{
"__LactoPanGEM__adp_c":1.0,
"__LactoPanGEM__atp_c":-1.0,
"__LactoPanGEM__cdp_c":-1.0,
"__LactoPanGEM__ctp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__NDPK3",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3OAR180",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0)",
"metabolites":{
"__LactoPanGEM__3hoctaacp_c":1.0,
"__LactoPanGEM__3ooctdacp_c":-1.0,
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__nadp_c":1.0,
"__LactoPanGEM__nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3OAR180",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD100",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C10:0)",
"metabolites":{
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"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__tdec2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD100",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD120",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:0)",
"metabolites":{
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"__LactoPanGEM__tddec2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD120",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD140",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0)",
"metabolites":{
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"__LactoPanGEM__tmrs2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD140",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD160",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:0)",
"metabolites":{
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"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__tpalm2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD160",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD180",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:0)",
"metabolites":{
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"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__toctd2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD180",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD40",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0)",
"metabolites":{
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"__LactoPanGEM__but2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD40",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD60",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0)",
"metabolites":{
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"__LactoPanGEM__thex2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD60",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3HAD80",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0)",
"metabolites":{
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"__LactoPanGEM__toct2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__3HAD80",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__ASPO6",
"name":"L-aspartate oxidase",
"metabolites":{
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"__LactoPanGEM__iasp_c":1.0,
"h2o2_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__ASPO6",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__BPNT",
"name":"3',5'-bisphosphate nucleotidase",
"metabolites":{
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"__LactoPanGEM__pap_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__BPNT",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__BTMAT1",
"name":"Butyryl-[acyl-carrier protein]:malonyl-CoA C-acyltransferase",
"metabolites":{
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"__LactoPanGEM__butacp_c":1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__BTMAT1",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__BTNt",
"name":"Biotin ABC transporter",
"metabolites":{
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"__LactoPanGEM__atp_c":-1.0,
"__LactoPanGEM__btn_c":1.0,
"__LactoPanGEM__btn_e":-1.0,
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"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__BTNt",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__EAR100x",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0)",
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"__LactoPanGEM__h_c":-1.0,
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"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__EAR100x",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__EAR120y",
"name":"",
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
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"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__EAR140x",
"name":"Tetradecanoyl-[acyl-carrier protein]:malonyl-CoA C-acyltransferase(decarboxylating, oxoacyl- and enoyl-reducing)",
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"__LactoPanGEM__nad_c":1.0,
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},
"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__EAR140x",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__EAR160y",
"name":"Hexadecanoyl-[acyl-carrier protein]:malonyl-CoA C-acyltransferase(decarboxylating, oxoacyl- and enoyl-reducing)",
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"__LactoPanGEM__hedacp_c":1.0,
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"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__EAR160y",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__EAR180y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0)",
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"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__EAR180y",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__EAR60x",
"name":"enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0)",
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"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__EAR60x",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__EAR80x",
"name":"enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0)",
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"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__EAR80x",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__G3PO",
"name":"Glycerol-3-phosphate oxidase",
"metabolites":{
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"__LactoPanGEM__glyc3p_c":1.0,
"h2o2_c":-1.0,
"o2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__G3PO",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__kaasIII",
"name":"beta-ketoacyl-ACP synthase III",
"metabolites":{
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"__LactoPanGEM__actacp_c":1.0,
"__LactoPanGEM__coa_c":1.0,
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__malacp_c":-1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__kaasIII",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__LPGS_LBR",
"name":"lysylphosphatidyl-glycerol synthetase",
"metabolites":{
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"__LactoPanGEM__lystrna_c":-1.0,
"__LactoPanGEM__pg_LBR_c":-1.0,
"__LactoPanGEM__trna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__LPGS_LBR",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__MAN1PT",
"name":"Mannose 1 phosphate guanylyltransferase",
"metabolites":{
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"__LactoPanGEM__gtp_c":-1.0,
"__LactoPanGEM__h_c":-1.0,
"__LactoPanGEM__man1p_c":-1.0,
"__LactoPanGEM__ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__MAN1PT",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__NNDPR",
"name":"Nicotinate-Nucleotide Diphosphorylase (Carboxylating)",
"metabolites":{
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"__LactoPanGEM__nicrnt_c":1.0,
"__LactoPanGEM__ppi_c":1.0,
"__LactoPanGEM__prpp_c":-1.0,
"__LactoPanGEM__quln_c":-1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__NNDPR",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP120",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0)",
"metabolites":{
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"__LactoPanGEM__pgp120_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"h2o_c":-1.0
},
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"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
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"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP140",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0)",
"metabolites":{
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"__LactoPanGEM__pgp140_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__PGPP140",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP141",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:1)",
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"__LactoPanGEM__pgp141_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__PGPP141",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP160",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:0)",
"metabolites":{
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"__LactoPanGEM__pgp160_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__PGPP160",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP161",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:1)",
"metabolites":{
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"__LactoPanGEM__pgp161_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__PGPP161",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP180",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:0)",
"metabolites":{
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"__LactoPanGEM__pgp180_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__PGPP180",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__PGPP181",
"name":"phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:1)",
"metabolites":{
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"__LactoPanGEM__pgp181_c":-1.0,
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"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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},
"annotation":{
"biggr":"__LactoPanGEM__PGPP181",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__QULNS",
"name":"quinolinate synthase",
"metabolites":{
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"__LactoPanGEM__iasp_c":-1.0,
"__LactoPanGEM__pi_c":1.0,
"__LactoPanGEM__quln_c":1.0,
"h2o_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__QULNS",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__TRO2EHL",
"name":"Trans-Octodec-2-enoyl-ACP hydro-lyase",
"metabolites":{
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"__LactoPanGEM__to2eacp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__TRO2EHL",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__UDCPDP",
"name":"undecaprenyl-diphosphatase",
"metabolites":{
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"__LactoPanGEM__pi_c":1.0,
"__LactoPanGEM__udcpdp_c":-1.0,
"__LactoPanGEM__udcpp_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
"Confidence Level":"0"
},
"annotation":{
"biggr":"__LactoPanGEM__UDCPDP",
"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__UDCPK",
"name":"undecaprenol kinase",
"metabolites":{
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"__LactoPanGEM__atp_c":-1.0,
"__LactoPanGEM__h_c":1.0,
"__LactoPanGEM__udcp_c":-1.0,
"__LactoPanGEM__udcpp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"GAP",
"notes":{
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"annotation":{
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"sbo":"SBO:0000176"
}
},
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},
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"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__FAS2_7_1",
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"Confidence Level":"0"
},
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"sbo":"SBO:0000176"
}
},
{
"id":"__LactoPanGEM__3OAS140",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:0)",
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},
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"sbo":"SBO:0000176"
}
},
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"id":"__LactoPanGEM__3OAS60",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C6:0)",
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},
"annotation":{
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"sbo":"SBO:0000176"
}
},
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"id":"__LactoPanGEM__3OAS120",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:0)",
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},
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"sbo":"SBO:0000176"
}
},
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"id":"__LactoPanGEM__3OAS80",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0)",
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},
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"sbo":"SBO:0000176"
}
},
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"id":"__LactoPanGEM__3OAS180",
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"annotation":{
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"sbo":"SBO:0000176"
}
},
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"id":"__LactoPanGEM__PROabc",
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},
"annotation":{
"biggr":"__LactoPanGEM__PROabc",
"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__CYSabc",
"name":"L-cysteine transport via ABC system",
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"annotation":{
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"sbo":"SBO:0000655"
}
},
{
"id":"__LactoPanGEM__PYDXS",
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"sbo":"SBO:0000176"
}
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"name":"3-Oxooctodecanoyl-ACP:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)",
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"annotation":{
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"sbo":"SBO:0000176"
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{
"id":"EX_s_c",
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"sbo":"SBO:0000627"
}
},
{
"id":"__LactoPanGEM__GLUt2",
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}
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{
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{
"id":"__LactoPanGEM__TRO2EAO",
"name":"trans-Octodec-2-enoyl-ACP:NAD+ oxidoreductase (A-specific)",
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{
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"id":"__LactoPanGEM__ADCL",
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{
"id":"__LactoPanGEM__AKP1",
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{
"id":"__LactoPanGEM__OROTt2",
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"sbo":"SBO:0000655"
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{
"id":"__LactoPanGEM__FOLD3",
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{
"id":"__LactoPanGEM__R03472",
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{
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{
"id":"__LactoPanGEM__TZLTT",
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{
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{
"id":"__LactoPanGEM__ACPpds",
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{
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{
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{
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{
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{
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{
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{
"id":"JNKPBCJA_03930",
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{
"id":"JNKPBCJA_02260",
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{
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{
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},
{
"id":"JNKPBCJA_02100",
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{
"id":"JNKPBCJA_09990",
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},
{
"id":"JNKPBCJA_10000",
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{
"id":"JNKPBCJA_07510",
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},
{
"id":"JNKPBCJA_03770",
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},
{
"id":"JNKPBCJA_03750",
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{
"id":"JNKPBCJA_03760",
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{
"id":"JNKPBCJA_07530",
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},
{
"id":"JNKPBCJA_07500",
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},
{
"id":"JNKPBCJA_03740",
"name":"G_JNKPBCJA_03740"
},
{
"id":"JNKPBCJA_03780",
"name":"G_JNKPBCJA_03780"
},
{
"id":"JNKPBCJA_09690",
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},
{
"id":"JNKPBCJA_09680",
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},
{
"id":"JNKPBCJA_11290",
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},
{
"id":"JNKPBCJA_11300",
"name":"G_JNKPBCJA_11300"
},
{
"id":"JNKPBCJA_04190",
"name":"G_JNKPBCJA_04190"
},
{
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"name":"G_JNKPBCJA_04200"
},
{
"id":"JNKPBCJA_14620",
"name":"G_JNKPBCJA_14620"
},
{
"id":"JNKPBCJA_16310",
"name":"G_JNKPBCJA_16310"
},
{
"id":"JNKPBCJA_18770",
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},
{
"id":"JNKPBCJA_15180",
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},
{
"id":"JNKPBCJA_04730",
"name":"G_JNKPBCJA_04730"
},
{
"id":"BIOMASS",
"name":"G_BIOMASS"
},
{
"id":"DEMAND",
"name":"G_DEMAND"
},
{
"id":"Diffusion",
"name":"G_Diffusion"
},
{
"id":"EXCHANGE",
"name":"G_EXCHANGE"
},
{
"id":"GAP",
"name":"G_GAP"
},
{
"id":"spontaneous",
"name":"G_spontaneous"
},
{
"id":"SINK",
"name":"G_SINK",
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"ORPHAN",
"name":"G_ORPHAN",
"annotation":{
"sbo":"SBO:0000243"
}
}
],
"id":"GCF_910574655_1",
"compartments":{
"c":"",
"e":""
},
"version":"1"
}