Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
  • Home
  • About
  • Data Access
  1. Home
  2. Models
  3. 511145_186_json
  4. Genes
  5. BKOAFFMI_02178
Gene
BKOAFFMI_02178
  • Model: 511145_186_json
Associated reactions
  BiGG ID Name Gene reaction rule
__Ecoli_panGEMs__RNDR1 Ribonucleoside-diphosphate reductase (ADP) (BKOAFFMI_01824 and (BKOAFFMI_02179 and BKOAFFMI_02178)) or (BKOAFFMI_00635 and (BKOAFFMI_02179 and BKOAFFMI_02178))
__Ecoli_panGEMs__RNDR2 Ribonucleoside-diphosphate reductase (GDP) (BKOAFFMI_00635 and (BKOAFFMI_02179 and BKOAFFMI_02178)) or (BKOAFFMI_01824 and (BKOAFFMI_02179 and BKOAFFMI_02178))
__Ecoli_panGEMs__RNDR3 Ribonucleoside-diphosphate reductase (CDP) (BKOAFFMI_00635 and (BKOAFFMI_02179 and BKOAFFMI_02178)) or (BKOAFFMI_01824 and (BKOAFFMI_02179 and BKOAFFMI_02178))
__Ecoli_panGEMs__RNDR4 Ribonucleoside-diphosphate reductase (UDP) (BKOAFFMI_00635 and (BKOAFFMI_02179 and BKOAFFMI_02178)) or ((BKOAFFMI_02179 and BKOAFFMI_02178) and BKOAFFMI_01824)