Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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  5. JCKCFDOI_03435
Gene
JCKCFDOI_03435
  • Model: 562_13559_json
Associated reactions
  BiGG ID Name Gene reaction rule
FHL Formate-hydrogen lyase (JCKCFDOI_00156 and (JCKCFDOI_03188 and JCKCFDOI_03186 and JCKCFDOI_03184 and JCKCFDOI_03181 and JCKCFDOI_03182 and JCKCFDOI_03185 and JCKCFDOI_03189 and JCKCFDOI_03187 and JCKCFDOI_03183 and JCKCFDOI_03180)) or (JCKCFDOI_00156 and (JCKCFDOI_03436 and JCKCFDOI_03437 and JCKCFDOI_03438 and JCKCFDOI_03434 and JCKCFDOI_03435 and JCKCFDOI_03433))
HYD1pp hydrogenase (ubiquinone-8: 2 protons) (periplasm) (JCKCFDOI_01563 and JCKCFDOI_01564 and JCKCFDOI_01562) or (JCKCFDOI_03766 and JCKCFDOI_03769 and JCKCFDOI_03768 and JCKCFDOI_03767) or (JCKCFDOI_03436 and JCKCFDOI_03437 and JCKCFDOI_03438 and JCKCFDOI_03434 and JCKCFDOI_03435 and JCKCFDOI_03433)