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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
OMPDC orotidine-5'-phosphate decarboxylase GAP
TRPS2 tryptophan synthase (indole) GAP
ANS anthranilate synthase GAP
ANPRT anthranilate phosphoribosyltransferase GAP
IGPS indole-3-glycerol-phosphate synthase GAP
TMDK1 thymidine kinase (ATP:thymidine) GAP
HCYSMT homocysteine S-methyltransferase GAP
GTPCII2 GTP cyclohydrolase II (25drapp) GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
DURIK1 deoxyuridine kinase (ATP:Deoxyuridine) GAP
TRPS3 tryptophan synthase (indoleglycerol phosphate) GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
TRPS1 tryptophan synthase (indoleglycerol phosphate) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__CPGNtonex Coprogen transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEENTERtonex Fe-enterobactin transport via ton system (extracellular) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__LADGMDH L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase GAP
ALAGLUE L-alanyl-gamma-glutamate epimerase GAP
GGGABAH gamma-glutamyl-gamma-aminobutyric acid hydrolase GAP
__Ecoli_panGEMs__CYANSTpp Cyanide sulfurtransferase (periplasmic) GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
CBLAT cob(I)alamin adenosyltransferase GAP
GGPTRCS gamma glutamyl putrescine synthase GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLK Allose kinase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
CBIAT Cobinamide adenyltransferase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
PRAIi phosphoribosylanthranilate isomerase (irreversible) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__EAR141y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:1) GAP
__Ecoli_panGEMs__EAR161x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1) GAP
__Ecoli_panGEMs__PAPA120pp Phosphatidate phosphatase (periplasmic, n-C12:0) GAP
PAPA140pp Phosphatidate phosphatase (periplasmic, n-C14:0) GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
__Ecoli_panGEMs__PAPA141pp Phosphatidate phosphatase (periplasmic, n-C14:1) GAP
PAPA160pp Phosphatidate phosphatase (periplasmic, n-C16:0) GAP
__Ecoli_panGEMs__PAPA161pp Phosphatidate phosphatase (periplasmic, n-C16:1) GAP
__Ecoli_panGEMs__PAPA180pp Phosphatidate phosphatase (periplasmic, n-C18:0) GAP
__Ecoli_panGEMs__FE3DHBZStonex Ferric 2,3-dihydroxybenzoylserine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__EAR141x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:1) GAP
__Ecoli_panGEMs__EAR181x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:1) GAP
__Ecoli_panGEMs__EAR181y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:1) GAP
__Ecoli_panGEMs__EAR180x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0) GAP
__Ecoli_panGEMs__EAR180y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0) GAP
__Ecoli_panGEMs__EAR80y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0) GAP
__Ecoli_panGEMs__EAR120y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0) GAP
__Ecoli_panGEMs__EAR121y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:1) GAP
__Ecoli_panGEMs__EAR140x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0) GAP
__Ecoli_panGEMs__EAR40y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0) GAP
__Ecoli_panGEMs__EAR161y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1) GAP
__Ecoli_panGEMs__EAR160y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0) GAP
__Ecoli_panGEMs__EAR100y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0) GAP
__Ecoli_panGEMs__EAR121x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1) GAP
__Ecoli_panGEMs__PAPA181pp Phosphatidate phosphatase (periplasmic, n-C18:1) GAP
PAPA160 Phosphatidate phosphatase (n-C16:0) GAP
__Ecoli_panGEMs__PAPA180 Phosphatidate phosphatase (n-C18:0) GAP
__Ecoli_panGEMs__PAPA181 Phosphatidate phosphatase (n-C18:1) GAP
PAPA140 Phosphatidate phosphatase (n-C14:0) GAP
__Ecoli_panGEMs__PAPA141 Phosphatidate phosphatase (n-C14:1) GAP
__Ecoli_panGEMs__PAPA161 Phosphatidate phosphatase (n-C16:1) GAP
__Ecoli_panGEMs__EAR100x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0) GAP
__Ecoli_panGEMs__EAR120x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0) GAP
__Ecoli_panGEMs__EAR160x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0) GAP
__Ecoli_panGEMs__EAR140y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0) GAP
__Ecoli_panGEMs__PAPA120 Phosphatidate phosphatase (n-C12:0) GAP
__Ecoli_panGEMs__EAR40x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0) GAP
__Ecoli_panGEMs__EAR60y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0) GAP
__Ecoli_panGEMs__EAR60x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0) GAP
__Ecoli_panGEMs__EAR80x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
LDGUNPD linear diguanylate phosphodiesterase GAP
__Ecoli_panGEMs__EPMEACPR Enoylpimeloyl-[ACP] methyl ester reductase GAP
__Ecoli_panGEMs__EGMEACPR Enoylglutaryl-[ACP] methyl ester reductase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
ALR2x aldose reductase (methylglyoxal) (nadh) GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
CBL1tonex Cob(1)alamin transport via ton system (extermal) GAP
CBItonex Cobinamide transport via ton system (extermal) GAP
RHMND L-rhamnonate dehydratase GAP
ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP