Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
DHORTS dihydroorotase GAP
__Ecoli_panGEMs__EDTXS1 Endotoxin Synthesis (lauroyl transferase) GAP
HCYSMT homocysteine S-methyltransferase GAP
__Ecoli_panGEMs__AACPS1 Acyl-[acyl-carrier-protein] synthetase (n-C14:0) GAP
BUTCT Acetyl-CoA:butyrate-CoA transferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
__Ecoli_panGEMs__MCOATA Malonyl-CoA-ACP transacylase GAP
DTMPK dTMP kinase GAP
P5CD 1-pyrroline-5-carboxylate dehydrogenase GAP
__Ecoli_panGEMs__AACPS2 Acyl-[acyl-carrier-protein] synthetase (n-C14:1) GAP
__Ecoli_panGEMs__AACPS3 Acyl-[acyl-carrier-protein] synthetase (n-C16:0) GAP
__Ecoli_panGEMs__AACPS4 Acyl-[acyl-carrier-protein] synthetase (n-C16:1) GAP
__Ecoli_panGEMs__UAGAAT UDP-N-acetylglucosamine acyltransferase GAP
__Ecoli_panGEMs__ACOATA Acetyl-CoA ACP transacylase GAP
TMK thiamine kinase GAP
PHYTSpp Phytase (periplasm) GAP
NTP3pp nucleoside-triphosphatase (GTP) (periplasm) GAP
ACACt2pp acetoacetate transport via proton symport (periplasm) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__CPGNtonex Coprogen transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
CYTBD2pp cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm) GAP
ACGAMK N-acetylglucosamine kinase GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
SARCOX sarcosine oxidase GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
PROt4pp Na+/Proline-L symporter (periplasm) GAP
GAL1PPpp D-galactose 1-phosphatase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLK Allose kinase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
MTRPOX N-methyltryptophan oxidase GAP
__Ecoli_panGEMs__AACPS5 Acyl-[acyl-carrier-protein] synthetase (n-C18:1) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__AGM3PH N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide beta -1,4-N-acetylglucosaminidase GAP
__Ecoli_panGEMs__AACPS8 Acyl-[acyl-carrier-protein] synthetase (n-C10:0) GAP
__Ecoli_panGEMs__AACPS9 Acyl-[acyl-carrier-protein] synthetase (n-C8:0) GAP
HXCT Acetyl-CoA:hexanoate-CoA transferase GAP
__Ecoli_panGEMs__AACPS6 Acyl-[acyl-carrier-protein] synthetase (n-C18:0) GAP
__Ecoli_panGEMs__AACPS7 Acyl-[acyl-carrier-protein] synthetase (n-C12:0) GAP
__Ecoli_panGEMs__KAS15 Beta-ketoacyl-ACP synthase (2) GAP
__Ecoli_panGEMs__3OAR121 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:1) GAP
HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__G3PAT141 Glycerol-3-phosphate acyltransferase (C14:1) GAP
__Ecoli_panGEMs__AGMH N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl beta -1,4-N-acetylglucosaminidase GAP
__Ecoli_panGEMs__G3PAT181 Glycerol-3-phosphate acyltransferase (C18:1) GAP
__Ecoli_panGEMs__MPTG Murein polymerizing transglycosylase GAP
__Ecoli_panGEMs__MPTG2 Murein polymerizing transglycosylase 2 (three linked units) GAP
__Ecoli_panGEMs__3OAR120 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0) GAP
__Ecoli_panGEMs__3OAR181 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:1) GAP
__Ecoli_panGEMs__3OAS181 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:1) GAP
__Ecoli_panGEMs__G3PAT140 Glycerol-3-phosphate acyltransferase (C14:0) GAP
__Ecoli_panGEMs__G3PAT160 Glycerol-3-phosphate acyltransferase (C16:0) GAP
__Ecoli_panGEMs__G3PAT161 Glycerol-3-phosphate acyltransferase (C16:1) GAP
__Ecoli_panGEMs__3OAR140 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0) GAP
__Ecoli_panGEMs__3OAR160 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0) GAP
__Ecoli_panGEMs__3OAR141 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:1) GAP
__Ecoli_panGEMs__3OAR161 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1) GAP
__Ecoli_panGEMs__AGM4PH N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide beta -1,4-N-acetylglucosaminidase GAP
__Ecoli_panGEMs__G3PAT180 Glycerol-3-phosphate acyltransferase (C18:0) GAP
__Ecoli_panGEMs__3OAR60 3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0) GAP
__Ecoli_panGEMs__3OAR80 3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0) GAP
__Ecoli_panGEMs__3OAR40 3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0) GAP
__Ecoli_panGEMs__3OAR100 3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0) GAP
__Ecoli_panGEMs__3OAR180 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0) GAP
__Ecoli_panGEMs__G3PAT120 Glycerol-3-phosphate acyltransferase (C12:0) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
PPAt4pp Na+/Propionate symporter (periplasm) GAP
__Ecoli_panGEMs__OGMEACPS 3-Oxo-glutaryl-[ACP] methyl ester synthase GAP
__Ecoli_panGEMs__OGMEACPR 3-Oxo-glutaryl-[ACP] methyl ester reductase GAP
3AMACHYD 3-aminoacrylate hydrolase GAP
__Ecoli_panGEMs__ACPPAT140 Acyl-(acyl carrier protein):phosphate acyltransferase (C14:0) GAP
__Ecoli_panGEMs__OPMEACPR 3-Oxo-pimeloyl-[ACP] methyl ester reductase GAP
__Ecoli_panGEMs__ACPPAT141 Acyl-(acyl carrier protein):phosphate acyltransferase (C14:1) GAP
__Ecoli_panGEMs__ACPPAT161 Acyl-(acyl carrier protein):phosphate acyltransferase (C16:1) GAP
__Ecoli_panGEMs__ACPPAT180 Acyl-(acyl carrier protein):phosphate acyltransferase (C18:0) GAP
__Ecoli_panGEMs__ACPPAT120 Acyl-(acyl carrier protein):phosphate acyltransferase (C12:0) GAP
URACPAH peroxyureidoacrylate hydrolase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
POAACR peroxyaminoacrylate reductase GAP
__Ecoli_panGEMs__ACPPAT160 Acyl-(acyl carrier protein):phosphate acyltransferase (C16:0) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
__Ecoli_panGEMs__ACPPAT181 Acyl-(acyl carrier protein):phosphate acyltransferase (C18:1) GAP
SQVOSI sulfoquinovose isomerase GAP
6D6SPA 6-deoxy-6-sulfofructose-1-phosphate aldolase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
DHPStr 2,3-dihydroxypropane 1-sulfonate transporter GAP
SQtr sulfoquinovose transporter GAP
DHPStex 2,3-dihydroxypropane 1-sulfonate transport via diffusion GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
SQtex sulphoquinovose transport via diffusion GAP
RHMND L-rhamnonate dehydratase GAP
PNSPA Purine Nucleoside Phorphoramidase GAP
SQGH sulfoquinovosidase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
PROD3 Proline dehydrogenase (q8) GAP
PYROX pyrimidine oxygenase GAP