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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
GLYCTO2 Glycolate oxidase GAP
GLYCTO3 Glycolate oxidase GAP
GLYCTO4 Glycolate oxidase GAP
PGL 6-phosphogluconolactonase GAP
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
PDXPP Pyridoxine 5-phosphate phosphatase GAP
UGLT UDPglucose--hexose-1-phosphate uridylyltransferase GAP
PMANM phosphomannomutase GAP
HCYSMT homocysteine S-methyltransferase GAP
UDPG4E UDPglucose 4-epimerase GAP
GOFUCR GDP-4-oxo-L-fucose reductase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
OP4ENH 2-oxopent-4-enoate hydratase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase GAP
__Ecoli_panGEMs__GMAND GDP-D-mannose dehydratase GAP
HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase GAP
DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase GAP
HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase GAP
HKNTDH_1 2-hydroxy-6-ketononotrienedioate hydrolase GAP
MAN1PT2 mannose-1-phosphate guanylyltransferase (GDP) GAP
TAUDO Taurine dioxygenase GAP
TAURabcpp taurine transport via ABC system (periplasm) GAP
3HCINNMH 3-hydroxycinnamate hydroxylase GAP
PACCOAL phenylacetate-CoA ligase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
FUCtpp L-fucose transport via proton symport (periplasm) GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
CYSabcpp L-cysteine uptake via ABC system (periplasm) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
AGt3 silver transport out via proton antiport GAP
__Ecoli_panGEMs__AAMYL Alpha-amylase GAP
GDPMNH GDP-mannose mannosyl hydrolase GAP
TUNGSabcpp tungstate transport via ABC system (periplasm) GAP
PEAMNOpp Phenethylamine oxidase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
CUt3 copper transport out via proton antiport GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
CYSDDS D-cysteine desulfhydrase GAP
__Ecoli_panGEMs__GDMANE GDP-4-dehydro-6-deoxy-D-mannose epimerase GAP
GALKr galactokinase GAP
LDH_D D-lactate dehydrogenase GAP
GALCTNLt2pp L-galactonate transport via proton symport (periplasm) GAP
GALCTLO L-galactonate oxidoreductase GAP
__Ecoli_panGEMs__POR5 Pyruvate synthase GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__S2FE2ST SUF [2Fe-2S] Transfer GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
__Ecoli_panGEMs__S4FE4ST SUF [4Fe-4S] Transfer GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
AI2K autoinducer-2 kinase GAP
SHGO S-2-hydroxyglutarate oxidase GAP
CHOLATEtpp cholate transport via proton antiport GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
PACOAT phenylacetyl-CoA thioesterase GAP
__Ecoli_panGEMs__DHPTDNR Dihydropteridine reductase GAP
__Ecoli_panGEMs__DHPTDNRN Dihydropteridine reductase (NADH) GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
AI2abcpp autoinducer-2 ABC transporter GAP
UDPGPT undecaprenyl-phosphate glucose phosphotransferase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP