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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
PYNP2r pyrimidine-nucleoside phosphorylase (uracil) GAP
ILETA isoleucine transaminase GAP
VALTA valine transaminase GAP
DHAD2 Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate) GAP
UPP3S uroporphyrinogen-III synthase GAP
DHAD1 dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate) GAP
KARA1 ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate) GAP
KARA2 ketol-acid reductoisomerase (2-Acetolactate) GAP
UAG2E UDP-N-acetylglucosamine 2-epimerase GAP
GLTPD Galactitol-1-phosphate dehydrogenase GAP
G1PTT glucose-1-phosphate thymidylyltransferase GAP
TDPGDH dTDPglucose 4,6-dehydratase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
__Ecoli_panGEMs__FADRx FAD reductase GAP
DAPE diaminopimelate epimerase GAP
__Ecoli_panGEMs__TDPADGAT DTDP-4-amino-4,6-dideoxy-D-glucose acetyltransferase GAP
ADNCYC adenylate cyclase GAP
__Ecoli_panGEMs__TDPAGTA DTDP-4-amino-4,6-dideoxy-D-glucose transaminase GAP
UACMAMO UDP-N-acetyl-D-mannosamine oxidoreductase GAP
ACMAMUT UDP-N-acetyl-D-mannosaminuronic acid transferase GAP
ACGAMT UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase GAP
__Ecoli_panGEMs__AADDGT DTDP-N-4-acetamido-4,6-dideoxy-D-galactose transferase GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__ECAP1pp Enterobacterial common antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__ECAP2pp Enterobacterial common antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__FE3Ri Fe(III) reduction GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLK Allose kinase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
ECAtpp enterobacterial common antigen transferase (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HMBS hydroxymethylbilane synthase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GDTP guanosine-5'-triphosphate,3'-diphosphate diphosphatase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
PPPGO protoporphyrinogen oxidase (aerobic) GAP
__Ecoli_panGEMs__LPLIPAL2ATG120 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C12:0) GAP
__Ecoli_panGEMs__PLIPA1E140pp Phospholipase A1 (phosphatidylethanolamine, n-C14:0) (periplasm) GAP
LPLIPAL2E140 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:0) GAP
PLIPA1E160pp Phospholipase A1 (phosphatidylethanolamine, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1E161pp Phospholipase A1 (phosphatidylethanolamine, n-C16:1) (periplasm) GAP
LPLIPAL2E180 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2G161 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2G181 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:1) GAP
__Ecoli_panGEMs__LPLIPAL2E141 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2E161 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2E181 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:1) GAP
__Ecoli_panGEMs__LPLIPAL2G180 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2G141 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATG140 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATG141 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATG160 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATG180 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATG161 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATG181 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:1) GAP
__Ecoli_panGEMs__PLIPA1E120pp Phospholipase A1 (phosphatidylethanolamine, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1G120pp Phospholipase A1 (phosphatidylglycerol, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2ATE120 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C12:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE140 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE160 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE180 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE141 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:1) GAP
__Ecoli_panGEMs__PLIPA1E181pp Phospholipase A1 (phosphatidylethanolamine, n-C18:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1G180pp Phospholipase A1 (phosphatidylglycerol, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2ATE161 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATE181 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:1) GAP
__Ecoli_panGEMs__PLIPA1G181pp Phospholipase A1 (phosphatidylglycerol, n-C18:1) (periplasm) GAP
PLIPA1E180pp Phospholipase A1 (phosphatidylethanolamine, n-C18:0) (periplasm) GAP
FLVRx flavin reductase (NAD) GAP
__Ecoli_panGEMs__PLIPA1G140pp Phospholipase A1 (phosphatidylglycerol, n-C14:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1G161pp Phospholipase A1 (phosphatidylglycerol, n-C16:1) (periplasm) GAP
__Ecoli_panGEMs__ECAP3pp Enterobacterial common antigen polymerase (periplasm) GAP
PPPGO3 protoporphyrinogen oxidase (anaerobic) GAP
OMBZLM 2-Octaprenyl-6-methoxy-benzoquinol methylase GAP
__Ecoli_panGEMs__PLIPA1A181pp Phospholipase A1 (phosphatidate, n-C18:1) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2A141 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:1) GAP
__Ecoli_panGEMs__PLIPA2A140pp Phospholipase A2 (phosphatidate, n-C14:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2A141pp Phospholipase A2 (phosphatidate, n-C14:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2A180pp Phospholipase A2 (phosphatidate, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2E141pp Phospholipase A2 (phosphatidylethanolamine, n-C14:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2E181pp Phospholipase A2 (phosphatidylethanolamine, n-C18:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G140pp Phospholipase A2 (phosphatidylglycerol, n-C14:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G160pp Phospholipase A2 (phosphatidylglycerol, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G181pp Phospholipase A2 (phosphatidylglycerol, n-C18:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2E140pp Phospholipase A2 (phosphatidylethanolamine, n-C14:0) (periplasm) GAP
PLIPA2E160pp Phospholipase A2 (phosphatidylethanolamine, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2A161pp Phospholipase A2 (phosphatidate, n-C16:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2A181pp Phospholipase A2 (phosphatidate, n-C18:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1G160pp Phospholipase A1 (phosphatidylglycerol, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1G141pp Phospholipase A1 (phosphatidylglycerol, n-C14:1) (periplasm) GAP
LPLIPAL2E160 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2G140 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2G160 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2G120 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C12:0) GAP
__Ecoli_panGEMs__PLIPA1E141pp Phospholipase A1 (phosphatidylethanolamine, n-C14:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2A120pp Phospholipase A2 (phosphatidate, n-C12:0) (periplasm) GAP
PLIPA2A160pp Phospholipase A2 (phosphatidate, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2E120 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C12:0) GAP
__Ecoli_panGEMs__PLIPA2E120pp Phospholipase A2 (phosphatidylethanolamine, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G141pp Phospholipase A2 (phosphatidylglycerol, n-C14:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G161pp Phospholipase A2 (phosphatidylglycerol, n-C16:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1A120pp Phospholipase A1 (phosphatidate, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1A140pp Phospholipase A1 (phosphatidate, n-C14:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1A141pp Phospholipase A1 (phosphatidate, n-C14:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1A160pp Phospholipase A1 (phosphatidate, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1A161pp Phospholipase A1 (phosphatidate, n-C16:1) (periplasm) GAP
__Ecoli_panGEMs__PLIPA1A180pp Phospholipase A1 (phosphatidate, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2A120 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C12:0) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
AMMQLT8 S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8) GAP
__Ecoli_panGEMs__PLIPA2E161pp Phospholipase A2 (phosphatidylethanolamine, n-C16:1) (periplasm) GAP
PLIPA2E180pp Phospholipase A2 (phosphatidylethanolamine, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G120pp Phospholipase A2 (phosphatidylglycerol, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__PLIPA2G180pp Phospholipase A2 (phosphatidylglycerol, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2A140 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2A160 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2A161 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2A180 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2A181 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:1) GAP
CTECOAI8 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI6 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI7 3-cis-2-trans-enoyl-CoA isomerase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
SQVOSI sulfoquinovose isomerase GAP
6D6SPA 6-deoxy-6-sulfofructose-1-phosphate aldolase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
DHPStr 2,3-dihydroxypropane 1-sulfonate transporter GAP
SQtr sulfoquinovose transporter GAP
DHPStex 2,3-dihydroxypropane 1-sulfonate transport via diffusion GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
SQtex sulphoquinovose transport via diffusion GAP
SQGH sulfoquinovosidase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP