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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
ASPT L-aspartase GAP
ARGDC arginine decarboxylase GAP
HCYSMT homocysteine S-methyltransferase GAP
TRE6PH trehalose-6-phosphate hydrolase GAP
CINNDO Cinnamate dioxygenase GAP
DHPPD 2,3-dihydroxyphenylpropionate dehydrogenase GAP
DHCIND 2,3-dihydroxycinnamate dehydrogenase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
CYNTAH Cyanate aminohydrolase GAP
DGGH a-galactosidase (melibiose) GAP
OP4ENH 2-oxopent-4-enoate hydratase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase GAP
PPCSCT Propanoyl-CoA: succinate CoA-transferase GAP
HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase GAP
DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase GAP
HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase GAP
HKNTDH_1 2-hydroxy-6-ketononotrienedioate hydrolase GAP
MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase GAP
PPPNDO Phenylpropanoate Dioxygenase GAP
3HCINNMH 3-hydroxycinnamate hydroxylase GAP
PACCOAL phenylacetate-CoA ligase GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP
TREptspp trehalose transport via PEP:Pyr PTS (periplasm) GAP
XYLUt2pp L-xylulose transport in via proton symport (periplasm) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ARGAGMt7pp Arginine/agmatine antiport (periplasm) GAP
ASPt2_3pp L-asparate transport via proton symport (3 H) (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
MALDDH malate decarboxylating oxidoreductase (decarboxylating) GAP
CADVtpp Lysine/Cadaverine antiporter (periplasm) GAP
GGGABAH gamma-glutamyl-gamma-aminobutyric acid hydrolase GAP
FRULYSK Fructoselysine Kinase GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
CRNt2rpp L-carnitine outward transport (H+ antiport) GAP
CRNDt2rpp D-carnitine outward transport (H+ antiport) GAP
CTBTt2rpp cronobetaine outward transport (H+ antiport) GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
R15BPK ribose-1,5-bisphosphokinase GAP
MALt2_3pp Malate transport via proton symport (3 H) (periplasm) GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
GGPTRCS gamma glutamyl putrescine synthase GAP
SUCCt2_3pp Succintate transport via proton symport (3 H) (periplasm) GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
PEAMNOpp Phenethylamine oxidase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLK Allose kinase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
FRUURt2rpp D-fructuronate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
MG2uabcpp Magnesium (Mg+2) ABC transporter (ubtake, periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) GAP
FHL Formate-hydrogen lyase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) GAP
ASO3t8pp arsenite efflux via ATP hydrolysis (periplasm) GAP
MMCD Methylmalonyl-CoA decarboxylase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
DURADx dihydrouracil dehydrogenase (NAD) GAP
ALAALAD D-alanine-D-alanine dipeptidase GAP
GTHRDabcpp Reduced glutathione via ABC system (periplasm) GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
__Ecoli_panGEMs__DSBDR DsbD reductase GAP
__Ecoli_panGEMs__TDSR1 Thiol:disulfide reductase (DsbC) GAP
__Ecoli_panGEMs__TDSR2 Thiol:disulfide reductase (DsbG) GAP
__Ecoli_panGEMs__UM4PL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine ligase GAP
GLYBt2pp Glycine betaine transport via proton symport (periplasm) GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__UM3PL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase GAP
GALCTNLt2pp L-galactonate transport via proton symport (periplasm) GAP
SELR selenate reductase GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__RNTR1c2 Ribonucleoside-triphosphate reductase (ATP) (flavodoxin) GAP
__Ecoli_panGEMs__RNTR2c2 Ribonucleoside-triphosphate reductase (GTP) (flavodoxin) GAP
__Ecoli_panGEMs__BMOCOS Bis-molybdenum cofactor synthase GAP
__Ecoli_panGEMs__BWCOS Tungsten bispterin cofactor synthase GAP
__Ecoli_panGEMs__RNTR3c2 Ribonucleoside-triphosphate reductase (CTP) (flavodoxin) GAP
__Ecoli_panGEMs__RNTR4c2 Ribonucleoside-triphosphate reductase (UTP) (flavodoxin) GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
__Ecoli_panGEMs__MPTSS Molybdopterin synthase sulfurylase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
__Ecoli_panGEMs__WCOS Tungsten pterin cofactor synthase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
23DOGULNt4pp Na+/ 2,3-Dioxo-L-gulonate symport (periplasm) GAP
TARTt2_3pp D-tartrate transport via proton symport (3 H) (periplasm) GAP
SUCTARTtpp succinate:D-tartrate antiporter (periplasm) GAP
SQVOSI sulfoquinovose isomerase GAP
6D6SPA 6-deoxy-6-sulfofructose-1-phosphate aldolase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
DHPStr 2,3-dihydroxypropane 1-sulfonate transporter GAP
SQtr sulfoquinovose transporter GAP
DHPStex 2,3-dihydroxypropane 1-sulfonate transport via diffusion GAP
AI2K autoinducer-2 kinase GAP
CHOLATEtpp cholate transport via proton antiport GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
PACOAT phenylacetyl-CoA thioesterase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
AI2abcpp autoinducer-2 ABC transporter GAP
__Ecoli_panGEMs__PAI2I Phospho-AI-2 isomerase GAP
CURR NADPH-dependent curcumin reductase GAP
ILEt3pp L-isoleucine transport out via proton antiport (periplasm) GAP
3SLAR 3-sulfolactaldehyde reductase GAP
SQtex sulphoquinovose transport via diffusion GAP
CPL carbon-phosphorous lyase GAP
INOSTO myo-Inositol:oxygen oxidoreductase GAP
__Ecoli_panGEMs__PAI2T 3-hydroxy-2,4-pentadione 5-phosphate thiolase GAP
DHCURR NADPH-dependent dihydrocurcumin reductase GAP
AMPNTAT aminoalkylphosphonate N-acetyltransferase GAP
SQGH sulfoquinovosidase GAP
ARMEPNS ?-D-ribose 1-methylphosphonate 5-triphosphate synthase GAP
RPNTPH RPnTP hydrolase GAP
PRCPD 5-phospho-?-D-ribosyl 1,2-cyclic phosphate phosphodiesterase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
__Ecoli_panGEMs__MOCOS Molybdenum cofactor synthase GAP