Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
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  3. 562_30350_json
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  5. FIEJCOKB_03331
Gene
FIEJCOKB_03331
  • Model: 562_30350_json
Associated reactions
  BiGG ID Name Gene reaction rule
NTD2 5'-nucleotidase (UMP) FIEJCOKB_01100 or FIEJCOKB_04020 or FIEJCOKB_03331
NTD4 5'-nucleotidase (CMP) FIEJCOKB_01100 or FIEJCOKB_03331
PYDXPP Pyridoxal 5-phosphate phosphatase FIEJCOKB_03536 or FIEJCOKB_04685 or FIEJCOKB_03234 or FIEJCOKB_03331
G3PT glycerol-3-phosphatase FIEJCOKB_03179 or FIEJCOKB_03331
NTD9 5'-nucleotidase (GMP) FIEJCOKB_01100 or FIEJCOKB_00323 or FIEJCOKB_03331
NTD7 5'-nucleotidase (AMP) FIEJCOKB_01100 or FIEJCOKB_00323 or FIEJCOKB_03331
R5PP ribose 5-phosphate phosphatase FIEJCOKB_03179 or FIEJCOKB_01158 or FIEJCOKB_03331 or FIEJCOKB_01502 or FIEJCOKB_00006