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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
FRD2 fumarate reductase GAP
FRD3 fumarate reductase GAP
__Ecoli_panGEMs__GLUTRS Glutamyl-tRNA synthetase GAP
ACCOAC acetyl-CoA carboxylase GAP
RBK_L1 L-ribulokinase (L-ribulose) GAP
MNNH D-mannonate hydrolyase GAP
ICL Isocitrate lyase GAP
UAGDP UDP-N-acetylglucosamine diphosphorylase GAP
HCYSMT homocysteine S-methyltransferase GAP
CINNDO Cinnamate dioxygenase GAP
DHPPD 2,3-dihydroxyphenylpropionate dehydrogenase GAP
DHCIND 2,3-dihydroxycinnamate dehydrogenase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
GMHEPPA D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
CYNTAH Cyanate aminohydrolase GAP
HSST homoserine O-succinyltransferase GAP
ARAI L-arabinose isomerase GAP
OP4ENH 2-oxopent-4-enoate hydratase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase GAP
PPCSCT Propanoyl-CoA: succinate CoA-transferase GAP
DHDPS dihydrodipicolinate synthase GAP
G1PACT glucosamine-1-phosphate N-acetyltransferase GAP
HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase GAP
DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase GAP
HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase GAP
HKNTDH_1 2-hydroxy-6-ketononotrienedioate hydrolase GAP
MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase GAP
PPPNDO Phenylpropanoate Dioxygenase GAP
3HCINNMH 3-hydroxycinnamate hydroxylase GAP
PACCOAL phenylacetate-CoA ligase GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP
XYLUt2pp L-xylulose transport in via proton symport (periplasm) GAP
ATPS4rpp ATP synthase (four protons for one ATP) (periplasm) GAP
__Ecoli_panGEMs__CPGNtonex Coprogen transport via ton system (extracellular) GAP
CHLabcpp choline transport via ABC system (periplasm) GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
MALDDH malate decarboxylating oxidoreductase (decarboxylating) GAP
GGGABAH gamma-glutamyl-gamma-aminobutyric acid hydrolase GAP
FRULYSK Fructoselysine Kinase GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
NHFRBO NADH:flavorubredoxin oxidoreductase GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
LACZpp b-galactosidase GAP
Kabcpp Potassium ABC transporter (periplasm) GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
DDCAtexi Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
TTDCAtexi Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
HDCAtexi Hexadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
GGPTRCS gamma glutamyl putrescine synthase GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
OCDCAtexi Octadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
OCDCEAtexi Octadecenoate (n-C18:1) transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
PEAMNOpp Phenethylamine oxidase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) GAP
ASO3t8pp arsenite efflux via ATP hydrolysis (periplasm) GAP
MMCD Methylmalonyl-CoA decarboxylase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
GLCabcpp D-glucose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__LPLIPAL2ATG120 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C12:0) GAP
LPLIPAL2E140 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:0) GAP
LPLIPAL2E180 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2G161 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2G181 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:1) GAP
__Ecoli_panGEMs__LPLIPAL2E141 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2E161 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2E181 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:1) GAP
__Ecoli_panGEMs__LPLIPAL2G180 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2G141 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATG140 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATG141 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATG160 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATG180 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATG161 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATG181 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:1) GAP
TTDCEAtexi Tetradecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
HDCEAtexi Hexadecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
__Ecoli_panGEMs__LPLIPAL2ATE120 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C12:0) GAP
ALAALAD D-alanine-D-alanine dipeptidase GAP
__Ecoli_panGEMs__LPLIPAL2ATE140 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE160 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE180 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2ATE141 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATE161 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2ATE181 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:1) GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
__Ecoli_panGEMs__LPLIPAL2A141 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:1) GAP
LPLIPAL2E160 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2G140 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2G160 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2G120 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C12:0) GAP
__Ecoli_panGEMs__LPLIPAL2E120 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C12:0) GAP
__Ecoli_panGEMs__LPLIPAL2A120 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C12:0) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
OXCDC Oxalyl-CoA decarboxylase GAP
__Ecoli_panGEMs__LPLIPAL2A140 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:0) GAP
__Ecoli_panGEMs__LPLIPAL2A160 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:0) GAP
__Ecoli_panGEMs__LPLIPAL2A161 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:1) GAP
__Ecoli_panGEMs__LPLIPAL2A180 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:0) GAP
__Ecoli_panGEMs__LPLIPAL2A181 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:1) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
23DOGULNt4pp Na+/ 2,3-Dioxo-L-gulonate symport (periplasm) GAP
SQVOSI sulfoquinovose isomerase GAP
6D6SPA 6-deoxy-6-sulfofructose-1-phosphate aldolase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
DHPStr 2,3-dihydroxypropane 1-sulfonate transporter GAP
SQtr sulfoquinovose transporter GAP
DHPStex 2,3-dihydroxypropane 1-sulfonate transport via diffusion GAP
AI2K autoinducer-2 kinase GAP
ACOXT acetyl-CoA:oxalate CoA-transferase GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
PACOAT phenylacetyl-CoA thioesterase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
AI2abcpp autoinducer-2 ABC transporter GAP
__Ecoli_panGEMs__PAI2I Phospho-AI-2 isomerase GAP
CURR NADPH-dependent curcumin reductase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
SQtex sulphoquinovose transport via diffusion GAP
INOSTO myo-Inositol:oxygen oxidoreductase GAP
__Ecoli_panGEMs__PAI2T 3-hydroxy-2,4-pentadione 5-phosphate thiolase GAP
DHCURR NADPH-dependent dihydrocurcumin reductase GAP
SQGH sulfoquinovosidase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
PYROX pyrimidine oxygenase GAP