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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
RBK ribokinase GAP
FRD2 fumarate reductase GAP
FRD3 fumarate reductase GAP
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
SSALx succinate-semialdehyde dehydrogenase (NAD) GAP
ALTRH altronate hydrolase GAP
GUI1 glucuronate isomerase (D-glucuronate) GAP
HCYSMT homocysteine S-methyltransferase GAP
BUTCT Acetyl-CoA:butyrate-CoA transferase GAP
TAGURr tagaturonate reductase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
THRt4pp L-threonine via sodium symport (periplasm) GAP
ACACt2pp acetoacetate transport via proton symport (periplasm) GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
SERt4pp L-serine via sodium symport (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
ARBt3ipp L-arabinose transport via proton antiport (periplasm) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GALURt2rpp D-galacturonate transport via proton symport, reversible (periplasm) GAP
ACONMT Trans-aconitate methyltransferase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
HXCT Acetyl-CoA:hexanoate-CoA transferase GAP
HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) GAP
GUI2 glucuronate isomerase (D-galacturonate) GAP
MELIBt3ipp melibiose transport in via antiport (periplasm) GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
AI2K autoinducer-2 kinase GAP
AI2abcpp autoinducer-2 ABC transporter GAP
__Ecoli_panGEMs__PAI2I Phospho-AI-2 isomerase GAP
RU5PP Ribulose-5-Phosphate Phosphatase GAP
__Ecoli_panGEMs__PAI2T 3-hydroxy-2,4-pentadione 5-phosphate thiolase GAP
RHMND L-rhamnonate dehydratase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP