Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
  • Home
  • About
  • Data Access
  1. Home
  2. Models
  3. 562_53932_json
  4. Genes
  5. CPAOABEP_03136
Gene
CPAOABEP_03136
  • Model: 562_53932_json
Associated reactions
  BiGG ID Name Gene reaction rule
__Ecoli_panGEMs__3PEPTabcpp Tripeptide (LalaDgluMdap) transport via ABC system (periplasm) (CPAOABEP_03136 and CPAOABEP_03134 and CPAOABEP_03137 and CPAOABEP_02970 and CPAOABEP_03135) or (CPAOABEP_01679 and CPAOABEP_01676 and CPAOABEP_01678 and CPAOABEP_01677) or (CPAOABEP_03136 and CPAOABEP_03134 and CPAOABEP_03135 and CPAOABEP_03137 and CPAOABEP_03138)
__Ecoli_panGEMs__4PEPTabcpp Tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm) (CPAOABEP_03138 and CPAOABEP_03134 and CPAOABEP_03137 and CPAOABEP_03136 and CPAOABEP_03135) or (CPAOABEP_01679 and CPAOABEP_01676 and CPAOABEP_01678 and CPAOABEP_01677)