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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
UAG2E UDP-N-acetylglucosamine 2-epimerase GAP
HCYSMT homocysteine S-methyltransferase GAP
GLTPD Galactitol-1-phosphate dehydrogenase GAP
DHAPT Dihydroxyacetone phosphotransferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
AOBUTDs L-2-amino-3-oxobutanoate decarboxylation (spontaneous) GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
ACODA acetylornithine deacetylase GAP
DTMPK dTMP kinase GAP
G5SADs L-glutamate 5-semialdehyde dehydratase (spontaneous) GAP
SGSAD Succinylglutamic semialdehyde dehydrogenase GAP
SUCptspp sucrose transport via PEP:Pyr (periplasm) GAP
ACGAMT UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase GAP
O2tpp o2 transport via diffusion (periplasm) GAP
TREptspp trehalose transport via PEP:Pyr PTS (periplasm) GAP
ACGAptspp N-Acetyl-D-glucosamine transport via PEP:Pyr PTS (periplasm) GAP
ACMANAptspp N-acetyl-D-mannosamine transport via PTS (periplasm) GAP
CO2tpp CO2 transporter via diffusion (periplasm) GAP
__Ecoli_panGEMs__ASCBptspp L-ascorbate transport via PEP:Pyr PTS (periplasm) GAP
FRUptspp D-fructose transport via PEP:Pyr PTS (periplasm) GAP
SBTptspp D-sorbitol transport via PEP:Pyr PTS (periplasm) GAP
ACALDtpp acetaldehyde reversible transport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
DATPHs dATP amine hydrolysis (spontaneous) GAP
__Ecoli_panGEMs__ECAP1pp Enterobacterial common antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__ECAP2pp Enterobacterial common antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
NOtpp NO transport (diffusion) GAP
N2Otpp nitrious oxide transport (diffusion) GAP
FALDtpp formaldehyde transport via diffusion (periplasm) GAP
__Ecoli_panGEMs__FECRMexs Ferrichrome Fe(III)-loading reaction (spontaneous) GAP
__Ecoli_panGEMs__DAPAL 2,3-diaminopropionate amonnia lyase GAP
__Ecoli_panGEMs__ARBTNexs Aerobactin Fe-loading reaction (spontaneous) GAP
__Ecoli_panGEMs__FEOXAMexs Ferroxamine Fe3-loading reaction (spontaneous) GAP
__Ecoli_panGEMs__FEENTERexs Enterobactin Fe(III) binding (spontaneous) GAP
__Ecoli_panGEMs__FE3HOXexs Fe(III) hydroxamate Fe-loading reaction (spontaneaous) GAP
__Ecoli_panGEMs__CPGNexs Coprogen Fe-loading reaction (spontaneaous) GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
DDCAtexi Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
TTDCAtexi Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
HDCAtexi Hexadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
MNLptspp mannitol transport via PEP:Pyr PTS (periplasm) GAP
ATPHs ATP amine hydrolysis (spontaneous) GAP
GTPHs GTP amine hydrolysis (spontaneous) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
OCDCAtexi Octadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
OCDCEAtexi Octadecenoate (n-C18:1) transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
METOX1s methionine oxidation (spontaneous) GAP
METOX2s methionine oxidation 2 (spontaneous) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
FALGTHLs formaldehyde glutathione ligase (spontaneous) GAP
GNKr gluconokinase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GLCptspp D-glucose transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) GAP
GDTP guanosine-5'-triphosphate,3'-diphosphate diphosphatase GAP
XAND xanthine dehydrogenase GAP
OMCDC 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation GAP
H2St1pp h2s transport (periplasm) GAP
CELBpts cellobiose transport via PEP:Pyr PTS GAP
MANptspp D-mannose transport via PEP:Pyr PTS (periplasm) GAP
MALTptspp maltose transport via PEP:Pyr PTS (periplasm) GAP
HXAND hypoxanthine dehydrogenase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT3 Heptosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
SO2tpp SO2 transport via diffusion (periplasm) GAP
TTDCEAtexi Tetradecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
HDCEAtexi Hexadecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
FRUpts2pp Fructose transport via PEP:Pyr PTS (f6p generating) (periplasm) GAP
H2tpp hydrogen transport diffusion (periplasm) GAP
__Ecoli_panGEMs__ECAP3pp Enterobacterial common antigen polymerase (periplasm) GAP
GAMptspp D-glucosamine transport via PEP:Pyr PTS (periplasm) GAP
ACONIs aconitate isomerase (spontaneous) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
MTHTHFSs (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous) GAP
RFAMPtex Rifampin transport via diffusion (extracellular to periplasm) GAP
MEOHtrpp Methanol reversible transport via diffusion (periplasm) GAP
ETOHtrpp ethanol reversible transport via diffusion (periplasm) GAP
CBMD carbamate deaminase GAP
__Ecoli_panGEMs__CPMPS Cyclic pyranopterin monophosphate synthase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
2DGLCptspp 2-Deoxy-D-glucose transport via PEP:Pyr PTS (periplasm) GAP
ARBTptspp arbutin transport via PEP:Pyr PTS (periplasm) GAP
DMSOtpp Dimethyl sulfoxide transport via diffusion (periplasm) GAP
__Ecoli_panGEMs__FE3DCITexs Dicitrate Fe(III) binding (spontaneous) GAP
CHTBSptspp chitobiose transport via PEP:Pyr PTS (periplasm) GAP
PHDA phenylhydantoinase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
__Ecoli_panGEMs__FESD1s Iron-sulfur cluster damage (peroxide, spontaneous) GAP
DHGLYH Dehydroglycine Hydratase GAP
__Ecoli_panGEMs__MOCDS Molybdopterin cytidine dinucleotide synthase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
NOVBCNtex Novobiocin transport via diffusion (extracellular to periplasm) GAP
DHPTDCs2 4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous) GAP
__Ecoli_panGEMs__FESD2s Iron-sulfur cluster damage (nitrous oxide, spontaneous) GAP