Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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  3. 562_58454_json
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  5. ALNJGCOK_01201
Gene
ALNJGCOK_01201
  • Model: 562_58454_json
Associated reactions
  BiGG ID Name Gene reaction rule
FHL Formate-hydrogen lyase (ALNJGCOK_04147 and (ALNJGCOK_01200 and ALNJGCOK_01202 and ALNJGCOK_01204 and ALNJGCOK_01207 and ALNJGCOK_01206 and ALNJGCOK_01203 and ALNJGCOK_01199 and ALNJGCOK_01201 and ALNJGCOK_01205 and ALNJGCOK_01209)) or (ALNJGCOK_04147 and (ALNJGCOK_00999 and ALNJGCOK_00998 and ALNJGCOK_00997 and ALNJGCOK_01001 and ALNJGCOK_01000 and ALNJGCOK_01002))