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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
IMPC IMP cyclohydrolase GAP
GLXCL glyoxalate carboligase GAP
ICL Isocitrate lyase GAP
GLUR glutamate racemase GAP
HCYSMT homocysteine S-methyltransferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
ALLTN allantoinase GAP
UAPGR UDP-N-acetylenolpyruvoylglucosamine reductase GAP
GMHEPPA D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase GAP
__Ecoli_panGEMs__FADRx FAD reductase GAP
PNTK pantothenate kinase GAP
GUAD_1 guanine deaminase GAP
HSST homoserine O-succinyltransferase GAP
NADTRHD NAD transhydrogenase GAP
UGLYCH Ureidoglycolate hydrolase GAP
URDGLYCD ureidoglycolate dehydrogenase GAP
PRAGSr phosphoribosylglycinamide synthase GAP
PACCOAL phenylacetate-CoA ligase GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLTNt2rpp allantoin transport in via proton symport (periplasm) GAP
FUCtpp L-fucose transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
FRULYSK Fructoselysine Kinase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__FE3Ri Fe(III) reduction GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
__Ecoli_panGEMs__DAPAL 2,3-diaminopropionate amonnia lyase GAP
METabcpp L-methionine transport via ABC system (periplasm) GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
__Ecoli_panGEMs__METDabcpp D-methionine transport via ABC system (periplasm) GAP
PEAMNOpp Phenethylamine oxidase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLK Allose kinase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
GLYALDtpp Glyceraldehyde facilitated diffusion (periplasm) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
UREAtpp Urea transport via facilitate diffusion (periplasm) GAP
GLYOX hydroxyacylglutathione hydrolase GAP
XAND xanthine dehydrogenase GAP
HXAND hypoxanthine dehydrogenase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
PPPGO protoporphyrinogen oxidase (aerobic) GAP
AICART phosphoribosylaminoimidazolecarboxamide formyltransferase GAP
FLVRx flavin reductase (NAD) GAP
HPYRI hydroxypyruvate isomerase GAP
PPPGO3 protoporphyrinogen oxidase (anaerobic) GAP
OMBZLM 2-Octaprenyl-6-methoxy-benzoquinol methylase GAP
GLYCK glycerate kinase GAP
__Ecoli_panGEMs__DSBAO1 DsbA protein reoxidation reaction (aerobic) GAP
__Ecoli_panGEMs__DSBAO2 DsbA protein reoxidation reaction (anaerobic) GAP
AMMQLT8 S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8) GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
GALCTNLt2pp L-galactonate transport via proton symport (periplasm) GAP
CTECOAI8 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI6 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI7 3-cis-2-trans-enoyl-CoA isomerase GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__BWCOGDS1 Tungsten bispterin guanine dinucleotide synthase (single GDP) GAP
__Ecoli_panGEMs__BWCOGDS2 Tungsten bispterin guanine dinucleotide synthase GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
__Ecoli_panGEMs__MOGDS Molybdopterin guanine dinucleotide synthase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
ALLTAMH2 Allantoate amidinohydrolase GAP
UGCIAMH ureidoglycine aminohydrolase GAP
CHOLATEtpp cholate transport via proton antiport GAP
PHDA phenylhydantoinase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
AI2abcpp autoinducer-2 ABC transporter GAP
GLYtpp glycine transport via facillitated diffusion GAP
CBL1tonex Cob(1)alamin transport via ton system (extermal) GAP
CBItonex Cobinamide transport via ton system (extermal) GAP
ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) GAP
__Ecoli_panGEMs__MOCDS Molybdopterin cytidine dinucleotide synthase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
__Ecoli_panGEMs__BMOGDS1 Bis-molybdopterin guanine dinucleotide synthase (single GDP) GAP
__Ecoli_panGEMs__BMOGDS2 Bis-molybdopterin guanine dinucleotide synthase GAP