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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
PTRCTA Putrescine Transaminase GAP
ACS acetyl-CoA synthetase GAP
PPM phosphopentomutase GAP
IPPMIb 2-isopropylmalate hydratase GAP
ANS anthranilate synthase GAP
IMPC IMP cyclohydrolase GAP
IPPMIa 3-isopropylmalate dehydratase GAP
G3PD7 glycerol-3-phosphate dehydrogenase (demethylmenaquinone-8) GAP
ABTA 4-aminobutyrate transaminase GAP
RBK_L1 L-ribulokinase (L-ribulose) GAP
HCYSMT homocysteine S-methyltransferase GAP
UDPG4E UDPglucose 4-epimerase GAP
LACZ b-galactosidase GAP
PPC phosphoenolpyruvate carboxylase GAP
CITL Citrate lyase GAP
__Ecoli_panGEMs__AACPS1 Acyl-[acyl-carrier-protein] synthetase (n-C14:0) GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
DDPGALA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase GAP
G3PD6 glycerol-3-phosphate dehydrogenase (menaquinone-8) GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
KDOPS 3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase GAP
__Ecoli_panGEMs__MCOATA Malonyl-CoA-ACP transacylase GAP
DAPE diaminopimelate epimerase GAP
HSK homoserine kinase GAP
P5CD 1-pyrroline-5-carboxylate dehydrogenase GAP
__Ecoli_panGEMs__AACPS2 Acyl-[acyl-carrier-protein] synthetase (n-C14:1) GAP
__Ecoli_panGEMs__AACPS3 Acyl-[acyl-carrier-protein] synthetase (n-C16:0) GAP
__Ecoli_panGEMs__AACPS4 Acyl-[acyl-carrier-protein] synthetase (n-C16:1) GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
AKGDH 2-Oxogluterate dehydrogenase GAP
DCTPD dCTP deaminase GAP
AMANK N-acetyl-D-mannosamine kinase GAP
__Ecoli_panGEMs__UAGAAT UDP-N-acetylglucosamine acyltransferase GAP
HISTD histidinol dehydrogenase GAP
PRAGSr phosphoribosylglycinamide synthase GAP
PPM2 phosphopentomutase 2 (deoxyribose) GAP
CBPS carbamoyl-phosphate synthase (glutamine-hydrolysing) GAP
__Ecoli_panGEMs__ACOATA Acetyl-CoA ACP transacylase GAP
SUCptspp sucrose transport via PEP:Pyr (periplasm) GAP
__Ecoli_panGEMs__TSULabcpp Thiosulfate transport via ABC system (periplasm) GAP
DDGALK 2-dehydro-3-deoxygalactonokinase GAP
THMabcpp thiamine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEOXAMabcpp Ferroxamine transport via ABC system (periplasm) GAP
CBL1abcpp Cob(1)alamin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FECRMabcpp Ferrichrome transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
CHLabcpp choline transport via ABC system (periplasm) GAP
CYSabc2pp L-cysteine export via ABC system (cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
PHEMEabcpp protoheme transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
HG2abcpp Mercury (Hg+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
NHFRBO NADH:flavorubredoxin oxidoreductase GAP
AGt3 silver transport out via proton antiport GAP
R15BPK ribose-1,5-bisphosphokinase GAP
Kabcpp Potassium ABC transporter (periplasm) GAP
MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__CPGNabcpp Coprogen transport via ABC system (periplasm) GAP
CBIuabcpp Cobinamide transport via ABC system (uptake, periplasm) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
PROabcpp L-proline transport via ABC system (periplasm) GAP
PROt4pp Na+/Proline-L symporter (periplasm) GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
ADOCBLabcpp Adenosylcobalamin transport via ABC system (periplasm) GAP
CRNabcpp L-carnitine transport via ABC system (periplasm) GAP
CRNDabcpp D-carnitine transport via ABC system (periplasm) GAP
CTBTabcpp crotonobetaine transport via ABC system (periplasm) GAP
FRUURt2rpp D-fructuronate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
CU2abcpp Copper (Cu+2) ABC transporter (periplasm) GAP
COBALT2abcpp Cobalt (Co+2) ABC transporter (periplasm) GAP
NI2abcpp Nickle (Ni+2) ABC transporter (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
GLYBabcpp Glycine betaine transport via ABC system (periplasm) GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
ACGK acetylglutamate kinase GAP
HMBS hydroxymethylbilane synthase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
ZN2abcpp Zinc (Zn+2) ABC transporter, efflux (periplasm) GAP
__Ecoli_panGEMs__ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) GAP
HSTPT histidinol-phosphate transaminase GAP
__Ecoli_panGEMs__ARBTNabcpp Aerobactin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__AACPS5 Acyl-[acyl-carrier-protein] synthetase (n-C18:1) GAP
CD2abcpp Cadmium (Cd+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
CUt3 copper transport out via proton antiport GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__AACPS8 Acyl-[acyl-carrier-protein] synthetase (n-C10:0) GAP
__Ecoli_panGEMs__AACPS9 Acyl-[acyl-carrier-protein] synthetase (n-C8:0) GAP
__Ecoli_panGEMs__AACPS6 Acyl-[acyl-carrier-protein] synthetase (n-C18:0) GAP
__Ecoli_panGEMs__AACPS7 Acyl-[acyl-carrier-protein] synthetase (n-C12:0) GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
AICART phosphoribosylaminoimidazolecarboxamide formyltransferase GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
G6Pt6_2pp Glucose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
GLYCK glycerate kinase GAP
__Ecoli_panGEMs__G3PAT141 Glycerol-3-phosphate acyltransferase (C14:1) GAP
__Ecoli_panGEMs__G3PAT181 Glycerol-3-phosphate acyltransferase (C18:1) GAP
F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport (periplasm) GAP
GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__FE3HOXabcpp Ferric-dicitrate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__G3PAT140 Glycerol-3-phosphate acyltransferase (C14:0) GAP
__Ecoli_panGEMs__G3PAT160 Glycerol-3-phosphate acyltransferase (C16:0) GAP
__Ecoli_panGEMs__G3PAT161 Glycerol-3-phosphate acyltransferase (C16:1) GAP
__Ecoli_panGEMs__G3PAT180 Glycerol-3-phosphate acyltransferase (C18:0) GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__G3PAT120 Glycerol-3-phosphate acyltransferase (C12:0) GAP
GTHRDabc2pp glutathione export via ABC system (cytoplasm to periplasm) GAP
NADH18pp NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
NADH17pp NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm) GAP
PPAt4pp Na+/Propionate symporter (periplasm) GAP
CTECOAI8 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI6 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI7 3-cis-2-trans-enoyl-CoA isomerase GAP
3AMACHYD 3-aminoacrylate hydrolase GAP
__Ecoli_panGEMs__ACPPAT140 Acyl-(acyl carrier protein):phosphate acyltransferase (C14:0) GAP
__Ecoli_panGEMs__ACPPAT141 Acyl-(acyl carrier protein):phosphate acyltransferase (C14:1) GAP
__Ecoli_panGEMs__ACPPAT161 Acyl-(acyl carrier protein):phosphate acyltransferase (C16:1) GAP
__Ecoli_panGEMs__ACPPAT180 Acyl-(acyl carrier protein):phosphate acyltransferase (C18:0) GAP
__Ecoli_panGEMs__DHNPTE Dihydroneopterin epimerase GAP
__Ecoli_panGEMs__ACPPAT120 Acyl-(acyl carrier protein):phosphate acyltransferase (C12:0) GAP
__Ecoli_panGEMs__LIPATPT Lipoate-ATP adenylate transferase GAP
__Ecoli_panGEMs__LIPAMPL Lipoyl-adenylate protein ligase GAP
NADPHXD NADPHX dehydratase GAP
NADPHXE NADPHX epimerase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
__Ecoli_panGEMs__DHBSZ3FEabcpp 23dhbsz3 Fe III transport via ABC system periplasm GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
__Ecoli_panGEMs__ACPPAT160 Acyl-(acyl carrier protein):phosphate acyltransferase (C16:0) GAP
ALR2x aldose reductase (methylglyoxal) (nadh) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
__Ecoli_panGEMs__ACPPAT181 Acyl-(acyl carrier protein):phosphate acyltransferase (C18:1) GAP
6D6SPA 6-deoxy-6-sulfofructose-1-phosphate aldolase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
__Ecoli_panGEMs__DHNPA2r Dihydroneopterin aldolase reversible GAP
NADHXD NADHX dehydratase GAP
NADHXE NADHX epimerase GAP
SELabcpp selenatenate transport via ABC system (periplasm) GAP
SEPHCHCS 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
RU5PP Ribulose-5-Phosphate Phosphatase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
__Ecoli_panGEMs__THZPSN3 Thiazole phosphate synthesis GAP
4HTHRK 4-Hydroxy-L-threonine kinase GAP
SQGH sulfoquinovosidase GAP
RPNTPH RPnTP hydrolase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
OMMBLHXy 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NADPHl) GAP
OPHHXy 2-Octaprenylphenol hydroxylase (NADPH) GAP
PROD3 Proline dehydrogenase (q8) GAP
SLNTabcpp selenite ABC transporter (periplasm) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
__Ecoli_panGEMs__OCTNLL Octanoate non-lipoylated apo domain ligase GAP