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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
PTRCTA Putrescine Transaminase GAP
ACS acetyl-CoA synthetase GAP
PPM phosphopentomutase GAP
IPPMIb 2-isopropylmalate hydratase GAP
ANS anthranilate synthase GAP
IMPC IMP cyclohydrolase GAP
IPPMIa 3-isopropylmalate dehydratase GAP
G3PD7 glycerol-3-phosphate dehydrogenase (demethylmenaquinone-8) GAP
ABTA 4-aminobutyrate transaminase GAP
RBK_L1 L-ribulokinase (L-ribulose) GAP
HCYSMT homocysteine S-methyltransferase GAP
PPC phosphoenolpyruvate carboxylase GAP
CITL Citrate lyase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
DDPGALA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase GAP
G3PD6 glycerol-3-phosphate dehydrogenase (menaquinone-8) GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
AST Arginine succinyltransferase GAP
HSK homoserine kinase GAP
P5CD 1-pyrroline-5-carboxylate dehydrogenase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
AKGDH 2-Oxogluterate dehydrogenase GAP
DCTPD dCTP deaminase GAP
AMANK N-acetyl-D-mannosamine kinase GAP
HISTD histidinol dehydrogenase GAP
ASAD aspartate-semialdehyde dehydrogenase GAP
SULR sulfite reductase (NADPH2) GAP
AMANAPEr N-acetylmannosamine 6-phosphate epimerase GAP
PPM2 phosphopentomutase 2 (deoxyribose) GAP
SUCptspp sucrose transport via PEP:Pyr (periplasm) GAP
__Ecoli_panGEMs__TSULabcpp Thiosulfate transport via ABC system (periplasm) GAP
TAURabcpp taurine transport via ABC system (periplasm) GAP
THMabcpp thiamine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FDMO FMNH2-dependent monooxygenase GAP
CBL1abcpp Cob(1)alamin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
CHLabcpp choline transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FDMO3 FMNH2-dependent monooxygenase (ethanesulfonate) GAP
__Ecoli_panGEMs__FDMO4 FMNH2-dependent monooxygenase (butanesulfonate) GAP
CYSabc2pp L-cysteine export via ABC system (cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__FDMO6 FMNH2-dependent monooxygenase (sulfoacetate) GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
HG2abcpp Mercury (Hg+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
NHFRBO NADH:flavorubredoxin oxidoreductase GAP
__Ecoli_panGEMs__FDMO2 FMNH2-dependent monooxygenase (methanesulfonate) GAP
AGt3 silver transport out via proton antiport GAP
R15BPK ribose-1,5-bisphosphokinase GAP
CBIuabcpp Cobinamide transport via ABC system (uptake, periplasm) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
PROt4pp Na+/Proline-L symporter (periplasm) GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
ADOCBLabcpp Adenosylcobalamin transport via ABC system (periplasm) GAP
FRUURt2rpp D-fructuronate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
CU2abcpp Copper (Cu+2) ABC transporter (periplasm) GAP
COBALT2abcpp Cobalt (Co+2) ABC transporter (periplasm) GAP
NI2abcpp Nickle (Ni+2) ABC transporter (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
ACGK acetylglutamate kinase GAP
HMBS hydroxymethylbilane synthase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
ZN2abcpp Zinc (Zn+2) ABC transporter, efflux (periplasm) GAP
GLYC3Pabcpp sn-Glycerol 3-phosphate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) GAP
HSTPT histidinol-phosphate transaminase GAP
CD2abcpp Cadmium (Cd+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
CUt3 copper transport out via proton antiport GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
G3PGabcpp sn-glycerol-3-phosphoglycerol transport via ABC system (periplasm) GAP
G3PIabcpp sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm) GAP
G3PSabcpp sn-glycerol-3-phosphoserine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__ALPATE160pp Apolipoprotein N-acyltransferase (phosphatidylethanolamine, periplasm) GAP
__Ecoli_panGEMs__ALPATG160pp Apolipoprotein N-acyltransferase (phosphatidylglycerol, periplasm) GAP
G3PEabcpp sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm) GAP
G3PCabcpp sn-glycerol-3-phosphocholine transport via ABC system (periplasm) GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
AICART phosphoribosylaminoimidazolecarboxamide formyltransferase GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
GLYCK glycerate kinase GAP
__Ecoli_panGEMs__FADRx2 FAD reductase GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
GTHRDabc2pp glutathione export via ABC system (cytoplasm to periplasm) GAP
NADH18pp NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
NADH17pp NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm) GAP
PPAt4pp Na+/Propionate symporter (periplasm) GAP
__Ecoli_panGEMs__BMOCOS Bis-molybdenum cofactor synthase GAP
__Ecoli_panGEMs__BWCOS Tungsten bispterin cofactor synthase GAP
__Ecoli_panGEMs__WCOS Tungsten pterin cofactor synthase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
__Ecoli_panGEMs__DHBSZ3FEabcpp 23dhbsz3 Fe III transport via ABC system periplasm GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
ALR2x aldose reductase (methylglyoxal) (nadh) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
GLYC2Pabcpp sn-Glycerol 2-phosphate transport via ABC system (periplasm) GAP
SELabcpp selenatenate transport via ABC system (periplasm) GAP
SEPHCHCS 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase GAP
DHNCOAS 1,4-dihydroxy-2-napthoyl-CoA synthase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
__Ecoli_panGEMs__THZPSN3 Thiazole phosphate synthesis GAP
4HTHRK 4-Hydroxy-L-threonine kinase GAP
AMPNTAT aminoalkylphosphonate N-acetyltransferase GAP
SQGH sulfoquinovosidase GAP
RPNTPH RPnTP hydrolase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
OMMBLHXy 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NADPHl) GAP
PROD3 Proline dehydrogenase (q8) GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP
SLNTabcpp selenite ABC transporter (periplasm) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
PYROX pyrimidine oxygenase GAP
__Ecoli_panGEMs__MOCOS Molybdenum cofactor synthase GAP