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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
ACS acetyl-CoA synthetase GAP
IPPMIb 2-isopropylmalate hydratase GAP
IPPMIa 3-isopropylmalate dehydratase GAP
__Ecoli_panGEMs__GLCS1 Glycogen synthase (ADPGlc) GAP
PMANM phosphomannomutase GAP
HCYSMT homocysteine S-methyltransferase GAP
LACZ b-galactosidase GAP
PPC phosphoenolpyruvate carboxylase GAP
CITL Citrate lyase GAP
GOFUCR GDP-4-oxo-L-fucose reductase GAP
GLTPD Galactitol-1-phosphate dehydrogenase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
DDPGALA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
HSK homoserine kinase GAP
P5CD 1-pyrroline-5-carboxylate dehydrogenase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
__Ecoli_panGEMs__GMAND GDP-D-mannose dehydratase GAP
AKGDH 2-Oxogluterate dehydrogenase GAP
DCTPD dCTP deaminase GAP
AMANK N-acetyl-D-mannosamine kinase GAP
HISTD histidinol dehydrogenase GAP
SERAT serine O-acetyltransferase GAP
ASAD aspartate-semialdehyde dehydrogenase GAP
DXYLK 1-Deoxy-D-xylulose kinase GAP
AMANAPEr N-acetylmannosamine 6-phosphate epimerase GAP
MAN1PT2 mannose-1-phosphate guanylyltransferase (GDP) GAP
CBPS carbamoyl-phosphate synthase (glutamine-hydrolysing) GAP
SUCptspp sucrose transport via PEP:Pyr (periplasm) GAP
__Ecoli_panGEMs__TSULabcpp Thiosulfate transport via ABC system (periplasm) GAP
DDGALK 2-dehydro-3-deoxygalactonokinase GAP
TAURabcpp taurine transport via ABC system (periplasm) GAP
THMabcpp thiamine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEOXAMabcpp Ferroxamine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FECRMabcpp Ferrichrome transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
CHLabcpp choline transport via ABC system (periplasm) GAP
CYSabc2pp L-cysteine export via ABC system (cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
HG2abcpp Mercury (Hg+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
__Ecoli_panGEMs__NTRIR4pp Nitrite Reductase (Menaquinole-8, periplasm) GAP
__Ecoli_panGEMs__NTRIR3pp Nitrite Reductase (Ubiquinole-8, periplasm) GAP
AGt3 silver transport out via proton antiport GAP
R15BPK ribose-1,5-bisphosphokinase GAP
Kabcpp Potassium ABC transporter (periplasm) GAP
__Ecoli_panGEMs__CPGNabcpp Coprogen transport via ABC system (periplasm) GAP
GDPMNH GDP-mannose mannosyl hydrolase GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
PROabcpp L-proline transport via ABC system (periplasm) GAP
CRNabcpp L-carnitine transport via ABC system (periplasm) GAP
CRNDabcpp D-carnitine transport via ABC system (periplasm) GAP
CTBTabcpp crotonobetaine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
CU2abcpp Copper (Cu+2) ABC transporter (periplasm) GAP
COBALT2abcpp Cobalt (Co+2) ABC transporter (periplasm) GAP
NI2abcpp Nickle (Ni+2) ABC transporter (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
GLYBabcpp Glycine betaine transport via ABC system (periplasm) GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
ACGK acetylglutamate kinase GAP
FHL Formate-hydrogen lyase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
ZN2abcpp Zinc (Zn+2) ABC transporter, efflux (periplasm) GAP
__Ecoli_panGEMs__ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__ARBTNabcpp Aerobactin transport via ABC system (periplasm) GAP
CD2abcpp Cadmium (Cd+2) ABC transporter (periplasm) GAP
CUt3 copper transport out via proton antiport GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GDMANE GDP-4-dehydro-6-deoxy-D-mannose epimerase GAP
__Ecoli_panGEMs__3OAR121 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:1) GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
GLYCK glycerate kinase GAP
__Ecoli_panGEMs__3OAR120 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0) GAP
__Ecoli_panGEMs__FE3HOXabcpp Ferric-dicitrate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__3OAR181 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:1) GAP
__Ecoli_panGEMs__3OAR140 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0) GAP
__Ecoli_panGEMs__3OAR160 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0) GAP
__Ecoli_panGEMs__3OAR141 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:1) GAP
__Ecoli_panGEMs__3OAR161 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1) GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__3OAR60 3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0) GAP
__Ecoli_panGEMs__3OAR80 3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0) GAP
__Ecoli_panGEMs__3OAR40 3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0) GAP
__Ecoli_panGEMs__3OAR100 3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0) GAP
__Ecoli_panGEMs__3OAR180 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0) GAP
GTHRDabc2pp glutathione export via ABC system (cytoplasm to periplasm) GAP
NADH18pp NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
NADH17pp NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm) GAP
CTECOAI8 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI6 3-cis-2-trans-enoyl-CoA isomerase GAP
__Ecoli_panGEMs__OGMEACPR 3-Oxo-glutaryl-[ACP] methyl ester reductase GAP
CTECOAI7 3-cis-2-trans-enoyl-CoA isomerase GAP
3AMACHYD 3-aminoacrylate hydrolase GAP
__Ecoli_panGEMs__OPMEACPR 3-Oxo-pimeloyl-[ACP] methyl ester reductase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
__Ecoli_panGEMs__DHBSZ3FEabcpp 23dhbsz3 Fe III transport via ABC system periplasm GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
SELabcpp selenatenate transport via ABC system (periplasm) GAP
SEPHCHCS 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
TYRL tyrosine lyase GAP
__Ecoli_panGEMs__THZPSN3 Thiazole phosphate synthesis GAP
4HTHRK 4-Hydroxy-L-threonine kinase GAP
SQGH sulfoquinovosidase GAP
ARMEPNS ?-D-ribose 1-methylphosphonate 5-triphosphate synthase GAP
RPNTPH RPnTP hydrolase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
PROD3 Proline dehydrogenase (q8) GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP
SLNTabcpp selenite ABC transporter (periplasm) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP