Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
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    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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  3. 562_68397_json
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  5. JECGFDCB_03401
Gene
JECGFDCB_03401
  • Model: 562_68397_json
Associated reactions
  BiGG ID Name Gene reaction rule
FHL Formate-hydrogen lyase JECGFDCB_01667 and (JECGFDCB_03402 and JECGFDCB_03401 and JECGFDCB_03400 and JECGFDCB_03404 and JECGFDCB_03403 and JECGFDCB_03405)
HYD1pp hydrogenase (ubiquinone-8: 2 protons) (periplasm) (JECGFDCB_00297 and JECGFDCB_00296 and JECGFDCB_00298) or (JECGFDCB_02962 and JECGFDCB_02959 and JECGFDCB_02960 and JECGFDCB_02961) or (JECGFDCB_03402 and JECGFDCB_03401 and JECGFDCB_03400 and JECGFDCB_03404 and JECGFDCB_03403 and JECGFDCB_03405)