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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
__Ecoli_panGEMs__LPADSS Lipid A disaccaride synthase GAP
GLXCL glyoxalate carboligase GAP
ARGSS argininosuccinate synthase GAP
HCYSMT homocysteine S-methyltransferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
AOBUTDs L-2-amino-3-oxobutanoate decarboxylation (spontaneous) GAP
__Ecoli_panGEMs__U23GAAT UDP-3-O-(3-hydroxymyristoyl)glucosamine acyltransferase GAP
UGLYCH Ureidoglycolate hydrolase GAP
G5SADs L-glutamate 5-semialdehyde dehydratase (spontaneous) GAP
__Ecoli_panGEMs__UAGAAT UDP-N-acetylglucosamine acyltransferase GAP
MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase GAP
PACCOAL phenylacetate-CoA ligase GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP
O2tpp o2 transport via diffusion (periplasm) GAP
CO2tpp CO2 transporter via diffusion (periplasm) GAP
ACALDtpp acetaldehyde reversible transport (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
FRULYSK Fructoselysine Kinase GAP
DATPHs dATP amine hydrolysis (spontaneous) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
NOtpp NO transport (diffusion) GAP
N2Otpp nitrious oxide transport (diffusion) GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
FALDtpp formaldehyde transport via diffusion (periplasm) GAP
__Ecoli_panGEMs__FECRMexs Ferrichrome Fe(III)-loading reaction (spontaneous) GAP
__Ecoli_panGEMs__ARBTNexs Aerobactin Fe-loading reaction (spontaneous) GAP
__Ecoli_panGEMs__FEOXAMexs Ferroxamine Fe3-loading reaction (spontaneous) GAP
__Ecoli_panGEMs__FEENTERexs Enterobactin Fe(III) binding (spontaneous) GAP
__Ecoli_panGEMs__FE3HOXexs Fe(III) hydroxamate Fe-loading reaction (spontaneaous) GAP
__Ecoli_panGEMs__CPGNexs Coprogen Fe-loading reaction (spontaneaous) GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
ATPHs ATP amine hydrolysis (spontaneous) GAP
GTPHs GTP amine hydrolysis (spontaneous) GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
PEAMNOpp Phenethylamine oxidase GAP
METOX1s methionine oxidation (spontaneous) GAP
METOX2s methionine oxidation 2 (spontaneous) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
FALGTHLs formaldehyde glutathione ligase (spontaneous) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
OMCDC 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation GAP
H2St1pp h2s transport (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT3 Heptosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
SO2tpp SO2 transport via diffusion (periplasm) GAP
HPYRI hydroxypyruvate isomerase GAP
H2tpp hydrogen transport diffusion (periplasm) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__LPLIPAL1G141pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:1) (periplasm) GAP
LPLIPAL1G180pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1G181pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:1) (periplasm) GAP
ACONIs aconitate isomerase (spontaneous) GAP
__Ecoli_panGEMs__LPLIPAL1E141pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:1) (periplasm) GAP
LPLIPAL1E160pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:0) (periplasm) GAP
LPLIPAL1E180pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1E181pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:1) (periplasm) GAP
LPLIPAL1G160pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1G161pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:1) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1G120pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1A141pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:1) (periplasm) GAP
LPLIPAL1A180pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:0) (periplasm) GAP
LPLIPAL1E140pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1E161pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:1) (periplasm) GAP
LPLIPAL1G140pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:0) (periplasm) GAP
LPLIPAL1A120pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C12:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1A140pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:0) (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1A181pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:1) (periplasm) GAP
LPLIPAL1E120pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C12:0) (periplasm) GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__LPLIPAL1A161pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:1) (periplasm) GAP
LPLIPAL1A160pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:0) (periplasm) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
GALCTNLt2pp L-galactonate transport via proton symport (periplasm) GAP
MTHTHFSs (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous) GAP
__Ecoli_panGEMs__OPMEACPD 3-Oxo-pimeloyl-[ACP] methyl ester dehydratase GAP
RFAMPtex Rifampin transport via diffusion (extracellular to periplasm) GAP
MEOHtrpp Methanol reversible transport via diffusion (periplasm) GAP
__Ecoli_panGEMs__OGMEACPD 3-Oxo-glutaryl-[ACP] methyl ester dehydratase GAP
ETOHtrpp ethanol reversible transport via diffusion (periplasm) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
CBMD carbamate deaminase GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
DMSOtpp Dimethyl sulfoxide transport via diffusion (periplasm) GAP
__Ecoli_panGEMs__METGLCUR 1-O-Methyl-Beta-D-glucuronidase GAP
__Ecoli_panGEMs__FE3DCITexs Dicitrate Fe(III) binding (spontaneous) GAP
CHOLATEtpp cholate transport via proton antiport GAP
PACOAT phenylacetyl-CoA thioesterase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
__Ecoli_panGEMs__FESD1s Iron-sulfur cluster damage (peroxide, spontaneous) GAP
__Ecoli_panGEMs__METGLCURt2pp 1-O-methyl-Beta-D-glucuronate transport via proton symport (periplasm) GAP
DHGLYH Dehydroglycine Hydratase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
NOVBCNtex Novobiocin transport via diffusion (extracellular to periplasm) GAP
DHPTDCs2 4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous) GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
__Ecoli_panGEMs__FESD2s Iron-sulfur cluster damage (nitrous oxide, spontaneous) GAP