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gdpfuc_c:-2 in 562_74553_json
  • GDP-beta-L-fucose(2-)
  • Charge: -2
  • Formula: C16H23N5O15P2
  • Compartment: c - cytosol
  • Universal Metabolite: gdpfuc
CHEBI:57273
  • GDP-beta-L-fucose(2-)
  • Type: Small Molecule
  • InChiKey: LQEBEXMHBLQMDB-JGQUBWHWSA-L
  • View on ChEBI
Properties
  • Molecular Mass||g/mol: 587.3258[0], 587.0[1], 589.0[2]
  • SMILES: C[C@@H]1O[C@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2O[C@@H](n3cnc4c(=O)nc(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)[C@@H]1O[0], C[C@@H]1O[C@@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2OC(n3cnc4c(=O)[nH]c(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)[C@@H]1O[1], C[C@@H]1O[C@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2O[C@@H](n3cnc4c(=O)[nH]c(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)[C@@H]1O[2]
  • Names: GDP-beta-L-fucose[0,1,2], guanosine 5'-[3-(6-deoxy-beta-L-galactopyranosyl) diphosphate][0], GDP-L-fucose[1], GDP-L-alpha-fucose[1], GDP-alpha-L-fucose[1]
Data Sources: [0] CHEBI:57273 via ChEBI, [1] cpd00272 via ModelSEED, [2] cpd23744 via ModelSEED
Linkouts
Data Sources: [0] CHEBI:57273 via ChEBI, [1] cpd00272 via ModelSEED, [2] cpd23744 via ModelSEED
MEMOTE Flags
This metabolite was flagged in the following MEMOTE tests:

A total of 81 (4.18%) metabolites are not consumed by any reaction of the model: ribflv_p, tcynt_c, __Ecoli_panGEMs__apg141_c, dkdglcn_c, __Ecoli_panGEMs__o16a4colipa_e, ...

Dead-ends are metabolites that can only be produced but not consumed by reactions in the model. They may indicate the presence of network and knowledge gaps. Implementation: Find dead-end metabolites structurally by considering only reaction equations and bounds. FBA is not carried out.

Reactions involving gdpfuc_c in 562_74553_json
  BiGG ID Name Reference Transport Collection-specific Model
  BiGG ID Name Reference Transport Collection-specific Model