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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
GLXCL glyoxalate carboligase GAP
HCYSMT homocysteine S-methyltransferase GAP
HPPK_1 6-hydroxymethyl-dihydropterin pyrophosphokinase GAP
GLTPD Galactitol-1-phosphate dehydrogenase GAP
BUTCT Acetyl-CoA:butyrate-CoA transferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
ALLTN allantoinase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
BETALDHx betaine-aldehyde dehydrogenase GAP
BETALDHy betaine-aldehyde dehydrogenase GAP
URDGLYCD ureidoglycolate dehydrogenase GAP
AP4AH Ap4A hydrolase GAP
AP5AH Ap5A hydrolase GAP
PACCOAL phenylacetate-CoA ligase GAP
GP4GH Gp4G hydrolase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
ACACt2pp acetoacetate transport via proton symport (periplasm) GAP
CHOLD choline dehydrogenase GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLTNt2rpp allantoin transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
CHLabcpp choline transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
ETHSO3abcpp ethanesulfonate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) GAP
FRULYSK Fructoselysine Kinase GAP
SULFACabcpp sulfoacetate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
INOSTt4pp Na+/myo-inositol symporter (periplasm) GAP
MSO3abcpp methanesulfonate transport via ABC system (periplasm) GAP
SKMt2pp shikimate transport in via proton symport (periplasm) GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
PEAMNOpp Phenethylamine oxidase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
FRUURt2rpp D-fructuronate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
PPDOy Propane-1,2-diol:NADP+ 1-oxidoreductase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
GLCabcpp D-glucose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
HXCT Acetyl-CoA:hexanoate-CoA transferase GAP
DURADx dihydrouracil dehydrogenase (NAD) GAP
__Ecoli_panGEMs__ALPATE160pp Apolipoprotein N-acyltransferase (phosphatidylethanolamine, periplasm) GAP
__Ecoli_panGEMs__ALPATG160pp Apolipoprotein N-acyltransferase (phosphatidylglycerol, periplasm) GAP
HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) GAP
HPYRI hydroxypyruvate isomerase GAP
GLYCK glycerate kinase GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
ALLTAMH2 Allantoate amidinohydrolase GAP
UGCIAMH ureidoglycine aminohydrolase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
LCARSyi lacaldehyde reductase (S-propane-1,2-diol forming) GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP