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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
GLYCTO2 Glycolate oxidase GAP
GLYCTO3 Glycolate oxidase GAP
GLYCTO4 Glycolate oxidase GAP
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
HCYSMT homocysteine S-methyltransferase GAP
LACZ b-galactosidase GAP
ACACCT acetyl-CoA:acetoacetyl-CoA transferase GAP
BUTCT Acetyl-CoA:butyrate-CoA transferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
ALLTN allantoinase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
CYNTAH Cyanate aminohydrolase GAP
P5CD 1-pyrroline-5-carboxylate dehydrogenase GAP
OP4ENH 2-oxopent-4-enoate hydratase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase GAP
CSND Cytosine deaminase GAP
HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase GAP
MCITL2 methylisocitrate lyase GAP
DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase GAP
HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase GAP
HKNTDH_1 2-hydroxy-6-ketononotrienedioate hydrolase GAP
URDGLYCD ureidoglycolate dehydrogenase GAP
ETHAAL Ethanolamine ammonia-lyase GAP
MCITS 2-methylcitrate synthase GAP
LCADi lactaldehyde dehydrogenase GAP
3HCINNMH 3-hydroxycinnamate hydroxylase GAP
PACCOAL phenylacetate-CoA ligase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
XYLUt2pp L-xylulose transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__FDMO FMNH2-dependent monooxygenase GAP
ACACt2pp acetoacetate transport via proton symport (periplasm) GAP
TREH alpha,alpha-trehalase GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLTNt2rpp allantoin transport in via proton symport (periplasm) GAP
ASNt2rpp L-asparagine reversible transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
MALTtexi maltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
GLCtex glucose transport via diffusion (extracellular to periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
CSNt2pp cytosine transport in via proton symport (periplasm) GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__MALTTRtexi Maltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
__Ecoli_panGEMs__MALTTTRtexi MaltotetraoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
__Ecoli_panGEMs__MALTPTtexi MaltopentaoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
__Ecoli_panGEMs__FDMO3 FMNH2-dependent monooxygenase (ethanesulfonate) GAP
__Ecoli_panGEMs__FDMO4 FMNH2-dependent monooxygenase (butanesulfonate) GAP
ETHSO3abcpp ethanesulfonate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
MALDDH malate decarboxylating oxidoreductase (decarboxylating) GAP
BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__LADGMDH L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase GAP
ALAGLUE L-alanyl-gamma-glutamate epimerase GAP
__Ecoli_panGEMs__FDMO6 FMNH2-dependent monooxygenase (sulfoacetate) GAP
SULFACabcpp sulfoacetate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
ACANTHAT acetyl-CoA:anthranilate acetyltransferase GAP
MSO3abcpp methanesulfonate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__DAPAL 2,3-diaminopropionate amonnia lyase GAP
__Ecoli_panGEMs__FDMO2 FMNH2-dependent monooxygenase (methanesulfonate) GAP
R15BPK ribose-1,5-bisphosphokinase GAP
MALTabcpp maltose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTHXabcpp Maltohexaose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTPTabcpp Maltopentaose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTTRabcpp Maltotriose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTTTRabcpp Maltotetraose transport via ABC system (periplasm) GAP
3KGK 3-keto-L-gulonate kinase GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
INDOLEt2pp Indole transport via proton symport, irreversible (periplasm) GAP
PROt4pp Na+/Proline-L symporter (periplasm) GAP
PEAMNOpp Phenethylamine oxidase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLK Allose kinase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
FALDH2 formaldehyde dehydrogenase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__14GLUCANabcpp 1,4-alpha-D-glucan transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__14GLUCANtexi 1,4-alpha-D-glucan transport via diffusion (extracellular to periplasm) irreversible GAP
PPDOy Propane-1,2-diol:NADP+ 1-oxidoreductase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) GAP
ABUTD Aminobutyraldehyde dehydrogenase GAP
MCITD 2-methylcitrate dehydratase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
HXCT Acetyl-CoA:hexanoate-CoA transferase GAP
GCALDD Glycolaldehyde dehydrogenase GAP
LDH_D D-lactate dehydrogenase GAP
HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__MALTHXtexi Maltohexaose transport via diffusion (extracellular to periplasm) irreversible GAP
GLYCK glycerate kinase GAP
PDE4 3',5'-cyclic-nucleotide phosphodiesterase GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
PPAt4pp Na+/Propionate symporter (periplasm) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
__Ecoli_panGEMs__ACOAD1fr Acyl-CoA dehydrogenase (butanoyl-CoA) GAP
23DOGULNt4pp Na+/ 2,3-Dioxo-L-gulonate symport (periplasm) GAP
CHOLATEtpp cholate transport via proton antiport GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
PHDA phenylhydantoinase GAP
TEO2M tellurite methyltransferase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
CURR NADPH-dependent curcumin reductase GAP
LCTStpp Lactose transport via proton symport (periplasm) GAP
METNA L-amino acid N-acyltransferase GAP
CPL carbon-phosphorous lyase GAP
DHCURR NADPH-dependent dihydrocurcumin reductase GAP
RHMND L-rhamnonate dehydratase GAP
AMPNTAT aminoalkylphosphonate N-acetyltransferase GAP
ARMEPNS ?-D-ribose 1-methylphosphonate 5-triphosphate synthase GAP
LCARSyi lacaldehyde reductase (S-propane-1,2-diol forming) GAP
__Ecoli_panGEMs__MOCDS Molybdopterin cytidine dinucleotide synthase GAP
RPNTPH RPnTP hydrolase GAP
PRCPD 5-phospho-?-D-ribosyl 1,2-cyclic phosphate phosphodiesterase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
PROD3 Proline dehydrogenase (q8) GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP