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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
XPPT xanthine phosphoribosyltransferase GAP
OMPDC orotidine-5'-phosphate decarboxylase GAP
G5SD glutamate-5-semialdehyde dehydrogenase GAP
ICDHyr isocitrate dehydrogenase (NADP) GAP
TRPS2 tryptophan synthase (indole) GAP
ANS anthranilate synthase GAP
ANPRT anthranilate phosphoribosyltransferase GAP
IGPS indole-3-glycerol-phosphate synthase GAP
PGK phosphoglycerate kinase GAP
TMDK1 thymidine kinase (ATP:thymidine) GAP
FTHFD formyltetrahydrofolate deformylase GAP
__Ecoli_panGEMs__GLUTRR Glutamyl-tRNA reductase GAP
AGMT agmatinase GAP
CDPMEK 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase GAP
HCYSMT homocysteine S-methyltransferase GAP
GTPCII2 GTP cyclohydrolase II (25drapp) GAP
DHAPT Dihydroxyacetone phosphotransferase GAP
UDPGALM UDPgalactopyranose mutase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
DURIK1 deoxyuridine kinase (ATP:Deoxyuridine) GAP
S7PI sedoheptulose 7-phosphate isomerase GAP
TRPS3 tryptophan synthase (indoleglycerol phosphate) GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
KDOPS 3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase GAP
CYNTAH Cyanate aminohydrolase GAP
TRE6PP trehalose-phosphatase GAP
BETALDHx betaine-aldehyde dehydrogenase GAP
BETALDHy betaine-aldehyde dehydrogenase GAP
AMPN AMP nucleosidase GAP
PPCSCT Propanoyl-CoA: succinate CoA-transferase GAP
CSND Cytosine deaminase GAP
PRPPS phosphoribosylpyrophosphate synthetase GAP
METAT methionine adenosyltransferase GAP
ACBIPGT Adenosyl cobinamide phosphate guanyltransferase GAP
TRPS1 tryptophan synthase (indoleglycerol phosphate) GAP
ADOCBLS Adenosylcobalamin 5'-phosphate synthase GAP
ADOCBIK Adenosyl cobinamide kinase GAP
MCITL2 methylisocitrate lyase GAP
MCITS 2-methylcitrate synthase GAP
GLU5K glutamate 5-kinase GAP
FBA3 Sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase GAP
LCADi lactaldehyde dehydrogenase GAP
CHOLD choline dehydrogenase GAP
TRE6PS alpha,alpha-trehalose-phosphate synthase (UDP-forming) GAP
ARBabcpp L-arabinose transport via ABC system (periplasm) GAP
ASNt2rpp L-asparagine reversible transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__CPGNtonex Coprogen transport via ton system (extracellular) GAP
DGSNt2pp deoxyguanosine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
DINSt2pp deoxyinosine transport in via proton symport (periplasm) GAP
GALt2pp D-galactose transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__FEENTERtonex Fe-enterobactin transport via ton system (extracellular) GAP
CSNt2pp cytosine transport in via proton symport (periplasm) GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
CYSabcpp L-cysteine uptake via ABC system (periplasm) GAP
TREHpp alpha,alpha-trehalase (periplasm) GAP
GLYOX3 glyoxalase III GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
__Ecoli_panGEMs__AM4PCP Anhydrous-N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase GAP
__Ecoli_panGEMs__UM4PCP UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine L,D-carboxypeptidase GAP
CBLAT cob(I)alamin adenosyltransferase GAP
INOSTt4pp Na+/myo-inositol symporter (periplasm) GAP
LALGP L-alanyl-gamma-L-glutamate peptidase GAP
SKMt2pp shikimate transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__AAMYL Alpha-amylase GAP
NAt3_1p5pp sodium proton antiporter (H:NA is 1.5) (periplasm) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
ASNNpp L-asparaginase GAP
GLUNpp glutaminase GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
NTPP9_1 Nucleoside triphosphate pyrophosphorylase (itp) GAP
NTPP10 Nucleoside triphosphate pyrophosphorylase (ditp) GAP
NTPP11_1 Nucleoside triphosphate pyrophosphorylase (xtp) GAP
ARGDCpp arginine decarboxylase GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__AGM4PCP N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase GAP
__Ecoli_panGEMs__4PCP Tetrapeptide L,D-carboxypeptidase GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
HCYSMT2 Homocysteine Methyltransferase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
CBIAT Cobinamide adenyltransferase GAP
PPDOy Propane-1,2-diol:NADP+ 1-oxidoreductase GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__DAAD D-Amino acid dehydrogenase GAP
GLCt2pp D-glucose transport in via proton symport (periplasm) GAP
PRAIi phosphoribosylanthranilate isomerase (irreversible) GAP
NNDMBRT Nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase GAP
ABUTD Aminobutyraldehyde dehydrogenase GAP
MMCD Methylmalonyl-CoA decarboxylase GAP
GTHS glutathione synthetase GAP
MCITD 2-methylcitrate dehydratase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
CYSDDS D-cysteine desulfhydrase GAP
GCALDD Glycolaldehyde dehydrogenase GAP
__Ecoli_panGEMs__PGSA180 Phosphatidylglycerol synthase (n-C18:0) GAP
__Ecoli_panGEMs__PAPA120pp Phosphatidate phosphatase (periplasmic, n-C12:0) GAP
PAPA140pp Phosphatidate phosphatase (periplasmic, n-C14:0) GAP
__Ecoli_panGEMs__PAPA141pp Phosphatidate phosphatase (periplasmic, n-C14:1) GAP
PAPA160pp Phosphatidate phosphatase (periplasmic, n-C16:0) GAP
__Ecoli_panGEMs__PAPA161pp Phosphatidate phosphatase (periplasmic, n-C16:1) GAP
__Ecoli_panGEMs__PAPA180pp Phosphatidate phosphatase (periplasmic, n-C18:0) GAP
__Ecoli_panGEMs__FE3DHBZStonex Ferric 2,3-dihydroxybenzoylserine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
GSNt2pp guanosine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__PGSA141 Phosphatidylglycerol synthase (n-C14:1) GAP
__Ecoli_panGEMs__PGSA160 Phosphatidylglycerol synthase (n-C16:0) GAP
__Ecoli_panGEMs__PGSA161 Phosphatidylglycerol synthase (n-C16:1) GAP
__Ecoli_panGEMs__PGSA140 Phosphatidylglycerol synthase (n-C14:0) GAP
__Ecoli_panGEMs__PAPA181pp Phosphatidate phosphatase (periplasmic, n-C18:1) GAP
__Ecoli_panGEMs__PGSA181 Phosphatidylglycerol synthase (n-C18:1) GAP
PAPA160 Phosphatidate phosphatase (n-C16:0) GAP
__Ecoli_panGEMs__PAPA180 Phosphatidate phosphatase (n-C18:0) GAP
__Ecoli_panGEMs__PAPA181 Phosphatidate phosphatase (n-C18:1) GAP
PAPA140 Phosphatidate phosphatase (n-C14:0) GAP
__Ecoli_panGEMs__PAPA141 Phosphatidate phosphatase (n-C14:1) GAP
__Ecoli_panGEMs__PAPA161 Phosphatidate phosphatase (n-C16:1) GAP
__Ecoli_panGEMs__DSBAO1 DsbA protein reoxidation reaction (aerobic) GAP
__Ecoli_panGEMs__DSBAO2 DsbA protein reoxidation reaction (anaerobic) GAP
__Ecoli_panGEMs__PAPA120 Phosphatidate phosphatase (n-C12:0) GAP
__Ecoli_panGEMs__PGSA120 Phosphatidylglycerol synthase (n-C12:0) GAP
__Ecoli_panGEMs__ACOAD7f Acyl-CoA dehydrogenase (hexadecanoyl-CoA) GAP
__Ecoli_panGEMs__ACOAD8f Acyl-CoA dehydrogenase (octadecanoyl-CoA) GAP
__Ecoli_panGEMs__ACOAD5f Acyl-CoA dehydrogenase (dodecanoyl-CoA) GAP
__Ecoli_panGEMs__ACOAD3f Acyl-CoA dehydrogenase (octanoyl-CoA) GAP
__Ecoli_panGEMs__ACOAD2f Acyl-CoA dehydrogenase (hexanoyl-CoA) GAP
__Ecoli_panGEMs__ACOAD4f Acyl-CoA dehydrogenase (decanoyl-CoA) GAP
__Ecoli_panGEMs__ACOAD6f Acyl-CoA dehydrogenase (tetradecanoyl-CoA) GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
CA2t3pp calcium (Ca+2) transport out via proton antiport (periplasm) GAP
ARGt3pp L-arginine transport out via proton antiport (cytoplasm to periplasm) GAP
LDGUNPD linear diguanylate phosphodiesterase GAP
MMM Methylmalonyl-CoA mutase GAP
DXYLTD D-xylonate dehydratase GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
TEO2M tellurite methyltransferase GAP
__Ecoli_panGEMs__FADt FAD transporter, periplasm GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
CURR NADPH-dependent curcumin reductase GAP
LCTStpp Lactose transport via proton symport (periplasm) GAP
METNA L-amino acid N-acyltransferase GAP
CBL1tonex Cob(1)alamin transport via ton system (extermal) GAP
CBItonex Cobinamide transport via ton system (extermal) GAP
__Ecoli_panGEMs__FMNt FMN transporter, periplasm GAP
DHCURR NADPH-dependent dihydrocurcumin reductase GAP
__Ecoli_panGEMs__ACOAD1fr Acyl-CoA dehydrogenase (butanoyl-CoA) GAP
ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) GAP
ASPtpp L-aspartate uptake via facillitated diffusion GAP
FUMt1pp fumarate transport via diffusion in (periplasm) GAP
SUCCt1pp succinate transport via diffusion in (periplasm) GAP
LCARSyi lacaldehyde reductase (S-propane-1,2-diol forming) GAP
MEPNabcpp methylpshophonic acid abc transporter GAP