Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
  • Home
  • About
  • Data Access
  1. Home
  2. Models
  3. 622_421_json
  4. Genes
  5. GHHAMBDP_03873
Gene
GHHAMBDP_03873
  • Model: 622_421_json
Associated reactions
  BiGG ID Name Gene reaction rule
PPTHpp Phosphonate hydrogenase (periplasm) GHHAMBDP_03873
PTHRpp phospho-L-threonine phosphatase (periplasmic) GHHAMBDP_04613 or GHHAMBDP_03873
R5PPpp ribose 5-phosphate phosphatase GHHAMBDP_04613 or GHHAMBDP_03873
PSP_Lpp phospho-L-serine phosphatase (periplasmic) GHHAMBDP_04613 or GHHAMBDP_03873
NTD2pp 5'-nucleotidase (UMP) GHHAMBDP_04613 or GHHAMBDP_03994 or GHHAMBDP_03873
NTD4pp 5'-nucleotidase (CMP) GHHAMBDP_03994 or GHHAMBDP_04613 or GHHAMBDP_03873
NTD7pp 5'-nucleotidase (AMP) GHHAMBDP_03994 or GHHAMBDP_04613 or GHHAMBDP_03873
NTD9pp 5'-nucleotidase (GMP) GHHAMBDP_03994 or GHHAMBDP_04613 or GHHAMBDP_03873
3NTD7pp 3'-nucleotidase (AMP) (periplasm) GHHAMBDP_04492 or GHHAMBDP_03873
3NTD4pp 3'-nucleotidase (CMP) (periplasm) GHHAMBDP_04492 or GHHAMBDP_03873 or GHHAMBDP_03873
3NTD2pp 3'-nucleotidase (UMP) (periplasm) GHHAMBDP_04492 or GHHAMBDP_03873
3NTD9pp 3'-nucleotidase (GMP) (periplasm) GHHAMBDP_04492 or GHHAMBDP_03873
G2PPpp glycerol 2-phosphate phosphatase (periplasmic) GHHAMBDP_04613 or GHHAMBDP_03873
G1PPpp Glucose-1-phosphatase GHHAMBDP_03873
__Ecoli_panGEMs__ACP1p Acid phosphatase (FMN) GHHAMBDP_03873