Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
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    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
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    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
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  3. 991915_7_json
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  5. GIAEMGDM_05310
Gene
GIAEMGDM_05310
  • Model: 991915_7_json
Associated reactions
  BiGG ID Name Gene reaction rule
ATPS4rpp ATP synthase (four protons for one ATP) (periplasm) (GIAEMGDM_05308 and (GIAEMGDM_05316 and GIAEMGDM_05314 and GIAEMGDM_05312 and GIAEMGDM_05313 and GIAEMGDM_05315) and (GIAEMGDM_05309 and GIAEMGDM_05311 and GIAEMGDM_05310)) or ((GIAEMGDM_05316 and GIAEMGDM_05314 and GIAEMGDM_05312 and GIAEMGDM_05313 and GIAEMGDM_05315) and (GIAEMGDM_05309 and GIAEMGDM_05311 and GIAEMGDM_05310))