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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
__Ecoli_panGEMs__14GLUCANabcpp 1,4-alpha-D-glucan transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__14GLUCANtexi 1,4-alpha-D-glucan transport via diffusion (extracellular to periplasm) irreversible GAP
23DOGULNt4pp Na+/ 2,3-Dioxo-L-gulonate symport (periplasm) GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
3HCINNMH 3-hydroxycinnamate hydroxylase GAP
3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase GAP
3KGK 3-keto-L-gulonate kinase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
5DKGR 5-keto-D-gluconate 5-reductase GAP
6D6SFK 6-deoxy-6-sulfofructose kinase GAP
6D6SPA 6-deoxy-6-sulfofructose-1-phosphate aldolase GAP
ACACCT acetyl-CoA:acetoacetyl-CoA transferase GAP
ACACt2pp acetoacetate transport via proton symport (periplasm) GAP
ACCOAL acetate-CoA ligase (ADP-forming) GAP
ACS acetyl-CoA synthetase GAP
ACt4pp Na+/Acetate symport (periplasm) GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
AGt3 silver transport out via proton antiport GAP
AI2abcpp autoinducer-2 ABC transporter GAP
AI2K autoinducer-2 kinase GAP
ALAALAD D-alanine-D-alanine dipeptidase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLK Allose kinase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLTAMH2 Allantoate amidinohydrolase GAP
ALLTN allantoinase GAP
ALLTNt2rpp allantoin transport in via proton symport (periplasm) GAP
ALLULPE Allulose 6-phosphate epimerase GAP
ASPabcpp L-aspartate transport via ABC system (periplasm) GAP
ASPt2pp L-aspartate transport in via proton symport (periplasm) GAP
BETALDHx betaine-aldehyde dehydrogenase GAP
BETALDHy betaine-aldehyde dehydrogenase GAP
BUTCT Acetyl-CoA:butyrate-CoA transferase GAP
BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
CHOLD choline dehydrogenase GAP
CHTBSptspp chitobiose transport via PEP:Pyr PTS (periplasm) GAP
CINNDO Cinnamate dioxygenase GAP
CITL Citrate lyase GAP
CITt7pp Citrate transport via succinate antiport (periplasm) GAP
CSND Cytosine deaminase GAP
CSNt2pp cytosine transport in via proton symport (periplasm) GAP
CUt3 copper transport out via proton antiport GAP
CYNTAH Cyanate aminohydrolase GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
CYTBO3_4pp cytochrome oxidase bo3 (ubiquinol-8: 4 protons) (periplasm) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__DAPAL 2,3-diaminopropionate amonnia lyase GAP
DC6PDA chito-oligosaccharide mono-deacetylase GAP
DDGALK 2-dehydro-3-deoxygalactonokinase GAP
DDPGALA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
DHAPT Dihydroxyacetone phosphotransferase GAP
DHCIND 2,3-dihydroxycinnamate dehydrogenase GAP
DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase GAP
DHPPD 2,3-dihydroxyphenylpropionate dehydrogenase GAP
DHPStex 2,3-dihydroxypropane 1-sulfonate transport via diffusion GAP
DHPStr 2,3-dihydroxypropane 1-sulfonate transporter GAP
DOGULNR 2,3 dioxo-L-gulonate reductase GAP
DXYLK 1-Deoxy-D-xylulose kinase GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
FALDH2 formaldehyde dehydrogenase GAP
FHL Formate-hydrogen lyase GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSK Fructoselysine Kinase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
FRUURt2rpp D-fructuronate transport via proton symport, reversible (periplasm) GAP
GALCTD galactarate dehydratase GAP
GALCTND galactonate dehydratase GAP
GALCTNLt2pp L-galactonate transport via proton symport (periplasm) GAP
GALCTNt2pp D-galactonate transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__GDMANE GDP-4-dehydro-6-deoxy-D-mannose epimerase GAP
GDPMNH GDP-mannose mannosyl hydrolase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
GLCtex glucose transport via diffusion (extracellular to periplasm) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GLUabcpp L-glutamate transport via ABC system (periplasm) GAP
GLUt2rpp L-glutamate transport via proton symport, reversible (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
GLYCK glycerate kinase GAP
GLYCLTt4pp glycolate transport via sodium symport (periplasm) GAP
GLYCTO2 Glycolate oxidase GAP
GLYCTO3 Glycolate oxidase GAP
GLYCTO4 Glycolate oxidase GAP
GLYOX3 glyoxalase III GAP
__Ecoli_panGEMs__GMAND GDP-D-mannose dehydratase GAP
GOFUCR GDP-4-oxo-L-fucose reductase GAP
GUAD_1 guanine deaminase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEMEOS Heme O synthase GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) GAP
HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase GAP
HKNTDH_1 2-hydroxy-6-ketononotrienedioate hydrolase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase GAP
HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) GAP
HPYRI hydroxypyruvate isomerase GAP
HXAND hypoxanthine dehydrogenase GAP
HXCT Acetyl-CoA:hexanoate-CoA transferase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
INOSTO myo-Inositol:oxygen oxidoreductase GAP
KDUI 5-keto-4-deoxyuronate isomerase GAP
LCARSyi lacaldehyde reductase (S-propane-1,2-diol forming) GAP
LCTStpp Lactose transport via proton symport (periplasm) GAP
M1PD mannitol-1-phosphate 5-dehydrogenase GAP
MALTabcpp maltose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTHXabcpp Maltohexaose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTHXtexi Maltohexaose transport via diffusion (extracellular to periplasm) irreversible GAP
__Ecoli_panGEMs__MALTPTabcpp Maltopentaose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTPTtexi MaltopentaoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
MALTtexi maltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
__Ecoli_panGEMs__MALTTRabcpp Maltotriose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTTRtexi Maltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
__Ecoli_panGEMs__MALTTTRabcpp Maltotetraose transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__MALTTTRtexi MaltotetraoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible GAP
MAN1PT2 mannose-1-phosphate guanylyltransferase (GDP) GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase GAP
MC6PH monoacetylchitobiose-6-phosphate hydrolase GAP
MCITD 2-methylcitrate dehydratase GAP
MCITL2 methylisocitrate lyase GAP
MCITS 2-methylcitrate synthase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
MMCD Methylmalonyl-CoA decarboxylase GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
MNNH D-mannonate hydrolyase GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__MOCDS Molybdopterin cytidine dinucleotide synthase GAP
__Ecoli_panGEMs__NTRIR3pp Nitrite Reductase (Ubiquinole-8, periplasm) GAP
__Ecoli_panGEMs__NTRIR4pp Nitrite Reductase (Menaquinole-8, periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OP4ENH 2-oxopent-4-enoate hydratase GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
PACCOAL phenylacetate-CoA ligase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
PDE4 3',5'-cyclic-nucleotide phosphodiesterase GAP
PEAMNOpp Phenethylamine oxidase GAP
PHDA phenylhydantoinase GAP
PMANM phosphomannomutase GAP
PPCSCT Propanoyl-CoA: succinate CoA-transferase GAP
PPDOy Propane-1,2-diol:NADP+ 1-oxidoreductase GAP
PPPNDO Phenylpropanoate Dioxygenase GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
PSURIK pseudouridine kinase GAP
PTRCORNt7pp putrescine/ornithine antiporter (periplasm) GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
RZ5PP alpha-ribazole 5-phosphate phosphatase GAP
__Ecoli_panGEMs__S2FE2ST SUF [2Fe-2S] Transfer GAP
__Ecoli_panGEMs__S4FE4ST SUF [4Fe-4S] Transfer GAP
SHGO S-2-hydroxyglutarate oxidase GAP
SQGH sulfoquinovosidase GAP
SQtex sulphoquinovose transport via diffusion GAP
SQtr sulfoquinovose transporter GAP
SQVOSI sulfoquinovose isomerase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
TPRDCOAS triphosphoribosyl-dephospho-CoA synthase GAP
TREH alpha,alpha-trehalase GAP
TRPAS2 Tryptophanase (L-tryptophan) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
UDPGALM UDPgalactopyranose mutase GAP
UDPGPT undecaprenyl-phosphate glucose phosphotransferase GAP
UGCIAMH ureidoglycine aminohydrolase GAP
URATEtpp uric acid transporter GAP
URDGLYCD ureidoglycolate dehydrogenase GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XAND xanthine dehydrogenase GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
XYLabcpp D-xylose transport via ABC system (periplasm) GAP
XYLI1 xylose isomerase GAP
XYLI2 xylose isomerase GAP
XYLUt2pp L-xylulose transport in via proton symport (periplasm) GAP
YUMPS yUMP synthetase GAP