Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
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    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
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    • Identifiers can also be entered directly.
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  3. GCA_007998105_1
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  5. BPFPEAIK_04515
Gene
BPFPEAIK_04515
  • Model: GCA_007998105_1
Associated reactions
  BiGG ID Name Gene reaction rule
DGUNC diguanylate cyclase BPFPEAIK_03911 or BPFPEAIK_04515 or BPFPEAIK_04200 or BPFPEAIK_03338 or BPFPEAIK_04112 or (((((((((((BPFPEAIK_04915 and BPFPEAIK_04916) and BPFPEAIK_04917) and BPFPEAIK_04918) and BPFPEAIK_02388) and BPFPEAIK_02389) and BPFPEAIK_02390) and BPFPEAIK_04736) and BPFPEAIK_04737) and BPFPEAIK_03909) and BPFPEAIK_03910) and BPFPEAIK_04113)