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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
2DGULRGx 2-Dehydro-L-gulonate reductase to gluconate (NADH) GAP
2DGULRGy 2-Dehydro-L-gulonate reductase to gluconate (NADPH) GAP
2DGULRx 2-dehydro-L-gulonate reductase (NADH) GAP
2DGULRy 2-dehydro-L-gulonate reductase (NADPH) GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
ACACt2pp acetoacetate transport via proton symport (periplasm) GAP
ADD adenine deaminase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
BSORx Biotin sulfoxide reductase GAP
BSORy Biotin sulfoxide reductase GAP
BUTCT Acetyl-CoA:butyrate-CoA transferase GAP
BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
CHOLID 7-?-hydroxysteroid dehydrogenase GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
DKGLCNR2x 2,5-diketo-D-gluconate reductase (NADH) GAP
DKGLCNR2y 2,5-diketo-D-gluconate reductase (NADPH) GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
G6Pt6_2pp Glucose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GLUABUTt7pp 4-aminobutyrate/glutamate antiport (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
HXCT Acetyl-CoA:hexanoate-CoA transferase GAP
INOSTt4pp Na+/myo-inositol symporter (periplasm) GAP
LDH_D D-lactate dehydrogenase GAP
MALTptspp maltose transport via PEP:Pyr PTS (periplasm) GAP
MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport (periplasm) GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
__Ecoli_panGEMs__METGLCUR 1-O-Methyl-Beta-D-glucuronidase GAP
__Ecoli_panGEMs__METGLCURt2pp 1-O-methyl-Beta-D-glucuronate transport via proton symport (periplasm) GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
PACCOAL phenylacetate-CoA ligase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
PEAMNOpp Phenethylamine oxidase GAP
__Ecoli_panGEMs__PETNT161pp Phosphoethanolamine transferase (c-C16:1) GAP
__Ecoli_panGEMs__PETNT181pp Phosphoethanolamine transferase (c-C16:1) GAP
__Ecoli_panGEMs__POR5 Pyruvate synthase GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
RHMND L-rhamnonate dehydratase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
UDPGALM UDPgalactopyranose mutase GAP