Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
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  3. GCF_000010245_2_json
  4. Genes
  5. PABHEMPP_02499
Gene
PABHEMPP_02499
  • Model: GCF_000010245_2_json
Associated reactions
  BiGG ID Name Gene reaction rule
FHL Formate-hydrogen lyase (PABHEMPP_04093 and (PABHEMPP_02498 and PABHEMPP_02496 and PABHEMPP_02494 and PABHEMPP_02491 and PABHEMPP_02492 and PABHEMPP_02495 and PABHEMPP_02499 and PABHEMPP_02497 and PABHEMPP_02493 and PABHEMPP_02490)) or (PABHEMPP_04093 and (PABHEMPP_02725 and PABHEMPP_02726 and PABHEMPP_02727 and PABHEMPP_02723 and PABHEMPP_02724 and PABHEMPP_02722))