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  5. gdpofuc_c:-2
gdpofuc_c:-2 in GCF_000410035_1_json
  • GDP-4-dehydro-6-deoxy-alpha-D-mannose(2-)
  • Charge: -2
  • Formula: C16H21N5O15P2
  • Compartment: c - cytosol
  • Universal Metabolite: gdpofuc
CHEBI:57964
  • GDP-4-dehydro-6-deoxy-alpha-D-mannose(2-)
  • Type: Small Molecule
  • InChiKey: PNHLMHWWFOPQLK-BKUUWRAGSA-L
  • View on ChEBI
Properties
  • Molecular Mass||g/mol: 585.31[0], 585.0[1,2,3]
  • SMILES: C[C@H]1O[C@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2O[C@@H](n3cnc4c(=O)nc(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@@H](O)C1=O[0], C[C@H]1O[C@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2OC(n3cnc4c(=O)[nH]c(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@@H](O)C1=O[1], C[C@@H]1O[C@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2O[C@@H](n3cnc4c(=O)[nH]c(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)C1=O[2], C[C@@H]1OC(OP(=O)([O-])OP(=O)([O-])OC[C@H]2O[C@@H](n3cnc4c(=O)[nH]c(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)C1=O[3]
  • Names: GDP-4-dehydro-alpha-D-rhamnose[0,1], GDP-4-dehydro-6-deoxy-alpha-D-mannose dianion[0], guanosine 5'-[3-(6-deoxy-alpha-D-lyxo-hexopyranosyl-4-ulose) diphosphate][0], GDP-4-dehydro-D-rhamnose[1], GDP-4-dehydro-6-deoxy-D-mannose[1], GDP-4-dehydro-6-deoxy-D-talose[1], GDP-4-dehydro-6-deoxy-alpha-D-mannose[1], GDP-4-dehydro-6-deoxy-alpha-D-talose[1], GDP-4-dehydro-6-deoxymannose[1], GDP-4-keto-6-deoxy-D-mannose[1], GDP-4-keto-6-deoxy-alpha-D-mannose[1], GDP-4-keto-6-deoxymannose[1], GDP-4-oxo-6-deoxy-D-mannose[1], GDP-4-oxo-6-deoxy-alpha-D-mannose[1], GDP-4-oxo-6-deoxymannose[1], GDP-4-keto-6-L-deoxygalactose[2], GDP-4-dehydro-6-L-deoxygalactose[2], GDP-4-dehydro-6-deoxy-beta-L-galactose[2], GDP-4-oxo-L-fucose[3]
Data Sources: [0] CHEBI:57964 via ChEBI, [1] cpd00900 via ModelSEED, [2] cpd10527 via ModelSEED, [3] cpd15472 via ModelSEED
Linkouts
Data Sources: [0] CHEBI:57964 via ChEBI, [1] cpd00900 via ModelSEED, [2] cpd10527 via ModelSEED, [3] cpd15472 via ModelSEED
MEMOTE Flags
This metabolite was flagged in the following MEMOTE tests:

A total of 212 (15.82%) metabolites are not produced by any reaction of the model: __LactoPanGEM__10mdacp_c, __LactoPanGEM__10muacp_c, __LactoPanGEM__11mdacp_c, __LactoPanGEM__12daihdglyc_c, __LactoPanGEM__12daipdglyc_c, ...

Orphans are metabolites that are only consumed but not produced by reactions in the model. They may indicate the presence of network and knowledge gaps. Implementation: Find orphan metabolites structurally by considering only reaction equations and bounds. FBA is not carried out.

Reactions involving gdpofuc_c in GCF_000410035_1_json
  BiGG ID Name Reference Transport Collection-specific Model
  BiGG ID Name Reference Transport Collection-specific Model