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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP
4ABZGLUH p-aminobenzoyl-glutamate hydrolase GAP
4ABZGLUtr p-aminobenzoyl glutamate:H+ symporter GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) GAP
ALAGLUE L-alanyl-gamma-glutamate epimerase GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLK Allose kinase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
ALR2x aldose reductase (methylglyoxal) (nadh) GAP
ANPRT anthranilate phosphoribosyltransferase GAP
ANS anthranilate synthase GAP
CBIAT Cobinamide adenyltransferase GAP
CBItonex Cobinamide transport via ton system (extermal) GAP
CBL1tonex Cob(1)alamin transport via ton system (extermal) GAP
CBLAT cob(I)alamin adenosyltransferase GAP
__Ecoli_panGEMs__CPGNtonex Coprogen transport via ton system (extracellular) GAP
__Ecoli_panGEMs__CYANSTpp Cyanide sulfurtransferase (periplasmic) GAP
DURIK1 deoxyuridine kinase (ATP:Deoxyuridine) GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__EAR100x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0) GAP
__Ecoli_panGEMs__EAR100y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0) GAP
__Ecoli_panGEMs__EAR120x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0) GAP
__Ecoli_panGEMs__EAR120y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0) GAP
__Ecoli_panGEMs__EAR121x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1) GAP
__Ecoli_panGEMs__EAR121y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:1) GAP
__Ecoli_panGEMs__EAR140x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0) GAP
__Ecoli_panGEMs__EAR140y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0) GAP
__Ecoli_panGEMs__EAR141x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:1) GAP
__Ecoli_panGEMs__EAR141y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:1) GAP
__Ecoli_panGEMs__EAR160x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0) GAP
__Ecoli_panGEMs__EAR160y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0) GAP
__Ecoli_panGEMs__EAR161x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1) GAP
__Ecoli_panGEMs__EAR161y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1) GAP
__Ecoli_panGEMs__EAR180x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0) GAP
__Ecoli_panGEMs__EAR180y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0) GAP
__Ecoli_panGEMs__EAR181x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:1) GAP
__Ecoli_panGEMs__EAR181y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:1) GAP
__Ecoli_panGEMs__EAR40x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0) GAP
__Ecoli_panGEMs__EAR40y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0) GAP
__Ecoli_panGEMs__EAR60x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0) GAP
__Ecoli_panGEMs__EAR60y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0) GAP
__Ecoli_panGEMs__EAR80x Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0) GAP
__Ecoli_panGEMs__EAR80y Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__EGMEACPR Enoylglutaryl-[ACP] methyl ester reductase GAP
__Ecoli_panGEMs__EPMEACPR Enoylpimeloyl-[ACP] methyl ester reductase GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FE3DHBZStonex Ferric 2,3-dihydroxybenzoylserine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEENTERtonex Fe-enterobactin transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
GGGABAH gamma-glutamyl-gamma-aminobutyric acid hydrolase GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
GGPTRCS gamma glutamyl putrescine synthase GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GTPCII2 GTP cyclohydrolase II (25drapp) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
IGPS indole-3-glycerol-phosphate synthase GAP
__Ecoli_panGEMs__LADGMDH L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase GAP
LDGUNPD linear diguanylate phosphodiesterase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OMPDC orotidine-5'-phosphate decarboxylase GAP
__Ecoli_panGEMs__PAPA120 Phosphatidate phosphatase (n-C12:0) GAP
__Ecoli_panGEMs__PAPA120pp Phosphatidate phosphatase (periplasmic, n-C12:0) GAP
PAPA140 Phosphatidate phosphatase (n-C14:0) GAP
PAPA140pp Phosphatidate phosphatase (periplasmic, n-C14:0) GAP
__Ecoli_panGEMs__PAPA141 Phosphatidate phosphatase (n-C14:1) GAP
__Ecoli_panGEMs__PAPA141pp Phosphatidate phosphatase (periplasmic, n-C14:1) GAP
PAPA160 Phosphatidate phosphatase (n-C16:0) GAP
PAPA160pp Phosphatidate phosphatase (periplasmic, n-C16:0) GAP
__Ecoli_panGEMs__PAPA161 Phosphatidate phosphatase (n-C16:1) GAP
__Ecoli_panGEMs__PAPA161pp Phosphatidate phosphatase (periplasmic, n-C16:1) GAP
__Ecoli_panGEMs__PAPA180 Phosphatidate phosphatase (n-C18:0) GAP
__Ecoli_panGEMs__PAPA180pp Phosphatidate phosphatase (periplasmic, n-C18:0) GAP
__Ecoli_panGEMs__PAPA181 Phosphatidate phosphatase (n-C18:1) GAP
__Ecoli_panGEMs__PAPA181pp Phosphatidate phosphatase (periplasmic, n-C18:1) GAP
PRAIi phosphoribosylanthranilate isomerase (irreversible) GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
RHMND L-rhamnonate dehydratase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
TMDK1 thymidine kinase (ATP:thymidine) GAP
TRPS1 tryptophan synthase (indoleglycerol phosphate) GAP
TRPS2 tryptophan synthase (indole) GAP
TRPS3 tryptophan synthase (indoleglycerol phosphate) GAP
UDPGALM UDPgalactopyranose mutase GAP