Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
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    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
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    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
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  2. Models
  3. GCF_004010675_1_json
  4. Genes
  5. DBGCJOGI_04043
Gene
DBGCJOGI_04043
  • Model: GCF_004010675_1_json
Associated reactions
  BiGG ID Name Gene reaction rule
FHL Formate-hydrogen lyase (DBGCJOGI_00039 and (DBGCJOGI_03803 and DBGCJOGI_03801 and DBGCJOGI_03799 and DBGCJOGI_03796 and DBGCJOGI_03797 and DBGCJOGI_03800 and DBGCJOGI_03804 and DBGCJOGI_03802 and DBGCJOGI_03798 and DBGCJOGI_03795)) or (DBGCJOGI_00039 and (DBGCJOGI_04041 and DBGCJOGI_04042 and DBGCJOGI_04043 and DBGCJOGI_04039 and DBGCJOGI_04040 and DBGCJOGI_04038))
HYD1pp hydrogenase (ubiquinone-8: 2 protons) (periplasm) (DBGCJOGI_02607 and DBGCJOGI_02606 and DBGCJOGI_02608) or (DBGCJOGI_04413 and DBGCJOGI_04410 and DBGCJOGI_04411 and DBGCJOGI_04412) or (DBGCJOGI_04041 and DBGCJOGI_04042 and DBGCJOGI_04043 and DBGCJOGI_04039 and DBGCJOGI_04040 and DBGCJOGI_04038)