Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
  • Home
  • About
  • Data Access
  1. Home
  2. Models
  3. GCF_004302255_1_json
  4. Genes
  5. CGAKOBOO_20540
Gene
CGAKOBOO_20540
  • Model: GCF_004302255_1_json
Associated reactions
  BiGG ID Name Gene reaction rule
__LactoPanGEM__2OXOADOXm 2-Oxoadipate:lipoamde 2-oxidoreductase(decarboxylating and acceptor-succinylating) CGAKOBOO_02890 or CGAKOBOO_20830 or CGAKOBOO_12730 or CGAKOBOO_20540
__LactoPanGEM__GLYCL Glycine Cleavage System CGAKOBOO_02890 or CGAKOBOO_12730 or CGAKOBOO_20540 or CGAKOBOO_15750 or CGAKOBOO_20530 or CGAKOBOO_20830 or CGAKOBOO_26790
__LactoPanGEM__PDH pyruvate dehydrogenase CGAKOBOO_02890 or CGAKOBOO_20520 or CGAKOBOO_12730 or CGAKOBOO_20540 or CGAKOBOO_20530 or CGAKOBOO_20830 or CGAKOBOO_20510
__LactoPanGEM__PDHc pyruvate dehydrogenase (dihydrolipoamide dehydrogenase) CGAKOBOO_02890 or CGAKOBOO_20830 or CGAKOBOO_12730 or CGAKOBOO_20540
__LactoPanGEM__r0620 R03316 CGAKOBOO_02890 or CGAKOBOO_20830 or CGAKOBOO_12730 or CGAKOBOO_20540