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ichor_c:-2 in GCF_009679345_1_json
  • isochorismate(2-)
  • Charge: -2
  • Formula: C10H8O6
  • Compartment: c - cytosol
  • Universal Metabolite: ichor
CHEBI:29780
  • isochorismate(2-)
  • Type: Small Molecule
  • InChiKey: NTGWPRCCOQCMGE-YUMQZZPRSA-L
  • View on ChEBI
Properties
  • Molecular Mass||g/mol: 224.16692[0], 224.0[1]
  • SMILES: C=C(O[C@H]1C=CC=C(C(=O)[O-])[C@@H]1O)C(=O)[O-][0,1]
  • Names: Isochorismate[0,1], (5S,6S)-5-[(1-carboxylatoethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylate[0], isochorismate[0,1], Isochorismic acid[1]
Data Sources: [0] CHEBI:29780 via ChEBI, [1] cpd00658 via ModelSEED
Linkouts
Data Sources: [0] CHEBI:29780 via ChEBI, [1] cpd00658 via ModelSEED
MEMOTE Flags
This metabolite was flagged in the following MEMOTE tests:

A total of 207 (15.84%) metabolites are not produced by any reaction of the model: __LactoPanGEM__10mdacp_c, __LactoPanGEM__10muacp_c, __LactoPanGEM__11mdacp_c, __LactoPanGEM__12daihdglyc_c, __LactoPanGEM__12daipdglyc_c, ...

Orphans are metabolites that are only consumed but not produced by reactions in the model. They may indicate the presence of network and knowledge gaps. Implementation: Find orphan metabolites structurally by considering only reaction equations and bounds. FBA is not carried out.

Reactions involving ichor_c in GCF_009679345_1_json
  BiGG ID Name Reference Transport Collection-specific Model
  BiGG ID Name Reference Transport Collection-specific Model