Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
  • Home
  • About
  • Data Access
  1. Home
  2. Models
  3. GCF_009863935_1_json
  4. Genes
  5. HOBDDBPE_18600
Gene
HOBDDBPE_18600
  • Model: GCF_009863935_1_json
Associated reactions
  BiGG ID Name Gene reaction rule
__LactoPanGEM__ADPTA Acetyl L L diaminopimelate aminotransferase HOBDDBPE_18600 or HOBDDBPE_21740
__LactoPanGEM__aratyr2 aromatic amino acid aminotransferase - tyrosine HOBDDBPE_18600 or HOBDDBPE_12290 or HOBDDBPE_21740
__LactoPanGEM__aratyr4 aromatic amino acid aminotransferase - tyrosine HOBDDBPE_18600 or HOBDDBPE_12290 or HOBDDBPE_21740
__LactoPanGEM__ASPTA Aspartate transaminase HOBDDBPE_26280 or HOBDDBPE_18600 or HOBDDBPE_22780 or HOBDDBPE_12290 or HOBDDBPE_22800 or HOBDDBPE_21740 or HOBDDBPE_15790 or HOBDDBPE_12300 or HOBDDBPE_11140
__LactoPanGEM__FDH Formate Dehydrogenase HOBDDBPE_18600
__LactoPanGEM__PHETA1 Phenylalanine transaminase HOBDDBPE_18600 or HOBDDBPE_13250 or HOBDDBPE_21740