__LactoPanGEM__METSRabc in GCF_013377705_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0__LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Gene Reaction Rule
MIGIIFKN_10050 or MIGIIFKN_11630 or MIGIIFKN_23750 or MIGIIFKN_04590 or MIGIIFKN_23740 or MIGIIFKN_11640 or MIGIIFKN_04580 or MIGIIFKN_11650 or MIGIIFKN_04600
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 317 (27.28%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__PLTAS, __LactoPanGEM__DADK, __LactoPanGEM__12MTRDACPTr, __LactoPanGEM__PPADPP1_1, __LactoPanGEM__3OAR40, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.