__LactoPanGEM__FBA_1 in GCF_013425545_1_json
  • Fructose-Bisphosphate Aldolase
  • __LactoPanGEM__f26bp_c:-4dhap_c:-2 + g3p_c:-2
  • Bounds: (-1000.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__FBA_1
Gene Reaction Rule
ELOGEJFE_09370 or ELOGEJFE_22030 or ELOGEJFE_10590 or ELOGEJFE_10650 or ELOGEJFE_10430 or ELOGEJFE_21320 or ELOGEJFE_10520
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 312 (27.39%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__METAT_1, __LactoPanGEM__SERTRS_1, __LactoPanGEM__GLK1_3_1:2, __LactoPanGEM__3OAR161_1, __LactoPanGEM__METTRS_1, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.