Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
  • Home
  • About
  • Data Access
  1. Home
  2. Models
  3. GCF_016029535_1
  4. Genes
  5. NOLBNPEC_12780
Gene
NOLBNPEC_12780

NOLBNPEC 12780

  • Model: GCF_016029535_1
Associated reactions
  BiGG ID Name Gene reaction rule
__LactoPanGEM__ADPTA Acetyl L L diaminopimelate aminotransferase NOLBNPEC_12780 or NOLBNPEC_02460
__LactoPanGEM__aratyr2 aromatic amino acid aminotransferase - tyrosine NOLBNPEC_12780 or NOLBNPEC_24040 or NOLBNPEC_02460
__LactoPanGEM__aratyr4 aromatic amino acid aminotransferase - tyrosine NOLBNPEC_12780 or NOLBNPEC_24040 or NOLBNPEC_02460
__LactoPanGEM__ASPTA Aspartate transaminase NOLBNPEC_12780 or NOLBNPEC_01560 or NOLBNPEC_02460 or NOLBNPEC_24040 or NOLBNPEC_17600 or NOLBNPEC_19250 or NOLBNPEC_17580 or NOLBNPEC_25690 or NOLBNPEC_24030
__LactoPanGEM__FDH Formate Dehydrogenase NOLBNPEC_12780
__LactoPanGEM__PHETA1 Phenylalanine transaminase NOLBNPEC_12780 or NOLBNPEC_23060 or NOLBNPEC_02460