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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_018993495_1_json
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
BLFLHGHO_14070 or BLFLHGHO_19040 or BLFLHGHO_19020 or BLFLHGHO_14080 or BLFLHGHO_27220 or BLFLHGHO_14060 or BLFLHGHO_00030 or BLFLHGHO_27210 or BLFLHGHO_19030
BiGG ID Name
BLFLHGHO_19040 None
BLFLHGHO_14080 None
BLFLHGHO_00030 None
BLFLHGHO_27220 None
BLFLHGHO_14060 None
BLFLHGHO_27210 None
BLFLHGHO_19030 None
BLFLHGHO_14070 None
BLFLHGHO_19020 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 313 (27.12%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__MTHFR2_1, __LactoPanGEM__AP4AH1, __LactoPanGEM__ASNTRS, __LactoPanGEM__DASYN120, __LactoPanGEM__3OAS180, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.