Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
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    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
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  3. RECON1
  4. Genes
  5. 3099_AT1
Gene
3099_AT1
  • Model: RECON1
Associated reactions
  BiGG ID Name Gene reaction rule
HEX1 hexokinase (D-glucose:ATP) 3098_AT3 or 80201_AT1 or 3098_AT2 or 3099_AT1 or 3098_AT4 or 3101_AT1 or 2645_AT3 or 3098_AT1 or 2645_AT2 or 3098_AT5 or 2645_AT1
HEX10 hexokinase (D-glucosamine:ATP) 3098_AT1 or 2645_AT3 or 3098_AT2 or 3098_AT4 or 3101_AT1 or 3098_AT3 or 2645_AT2 or 80201_AT1 or 3099_AT1 or 3098_AT5 or 2645_AT1
HEX4 hexokinase (D-mannose:ATP) 3101_AT1 or 80201_AT1 or 3098_AT3 or 3098_AT5 or 3099_AT1 or 3098_AT1 or 2645_AT1 or 2645_AT2 or 3098_AT2 or 2645_AT3 or 3098_AT4
HEX7 hexokinase (D-fructose:ATP) 2645_AT1 or 3099_AT1 or 3098_AT2 or 3098_AT4 or 80201_AT1 or 3098_AT3 or 3098_AT1 or 3101_AT1 or 2645_AT3 or 3098_AT5 or 2645_AT2