Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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Gene
STM2954

STM2954

  • Model: STM_v1_0
Associated reactions
  BiGG ID Name Gene reaction rule
NTPP1 Nucleoside triphosphate pyrophosphorylase (dgtp) STM2954 or STM0137
NTPP2_1 Nucleoside triphosphate pyrophosphorylase (gtp) STM0137 or STM2954
NTPP3 Nucleoside triphosphate pyrophosphorylase (dctp) STM2954 or STM2295 or STM1301
NTPP4 Nucleoside triphosphate pyrophosphorylase (ctp) STM2954 or STM1301
NTPP5 Nucleoside triphosphate pyrophosphorylase (datp) STM2954 or STM1900
NTPP6 Nucleoside triphosphate pyrophosphorylase (atp) STM2954
NTPP7 Nucleoside triphosphate pyrophosphorylase (dttp) STM2295 or STM2954
NTPP8 Nucleoside triphosphate pyrophosphorylase (utp) STM2954