Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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Gene
STM4231

STM4231

  • Model: STM_v1_0
Associated reactions
  BiGG ID Name Gene reaction rule
14GLUCANtexi 1,4-alpha-D-glucan transport via diffusion (extracellular to periplasm) irreversible STM4231
GLCtex glucose transport via diffusion (extracellular to periplasm) STM4231
MALTHXtexi maltohexaose transport via diffusion (extracellular to periplasm) irreversible STM4231
MALTPTtexi maltopentaoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible STM4231
MALTTRtexi Maltotriose transport via diffusion (extracellular to periplasm) irreversible STM4231
MALTTTRtexi maltotetraoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible STM4231
MALTtexi maltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible STM4231