O2tex in iEC042_1314
- oxygen transport via diffusion (extracellular to periplasm)
- o2_e:0 ⇌ o2_p:0
- Bounds: (-1000.0, 1000.0)
- Universal Reaction: O2tex
Gene Reaction Rule
EC042_0302 or EC042_1020 or EC042_1523 or EC042_2456
| BiGG ID | Name | |
|---|---|---|
 |
EC042_2456 | EC042 2456 |
|
EC042_0302 | EC042 0302 |
|
EC042_1523 | EC042 1523 |
|
EC042_1020 | EC042 1020 |
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:
There are a total of 5 reversible oxygen-containing reactions (11.11% of all oxygen-containing reactions): EX_o2_e, O2Stex, MOX, O2tex, O2tpp
The directionality of oxygen-producing/-consuming reactions affects the model's ability to grow anaerobically i.e. create faux-anaerobic organisms. This test reports how many of these oxygen-containing reactions are reversible. This test does not have any mandatory 'pass' criteria. Implementation: First, find the metabolite representing atmospheric oxygen in the model on the basis of an internal mapping table or by specifically looking for the formula "O2". Then, find all reactions that produce or consume oxygen and report those that are reversible.