Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
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    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
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    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
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    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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Gene
ECUMN_3045

ECUMN 3045

  • Model: iECUMN_1333
Associated reactions
  BiGG ID Name Gene reaction rule
FHL Formate-hydrogen lyase (ECUMN_4615 and (ECUMN_2794 and ECUMN_2795 and ECUMN_2796 and ECUMN_2797 and ECUMN_2798 and ECUMN_2799 and ECUMN_2800 and ECUMN_2801 and ECUMN_2802 and ECUMN_2803)) or (ECUMN_4615 and (ECUMN_3041 and ECUMN_3042 and ECUMN_2800 and ECUMN_3044 and ECUMN_3045 and ECUMN_3046))
HYD1pp hydrogenase (ubiquinone-8: 2 protons) (periplasm) (ECUMN_1162 and ECUMN_1163 and ECUMN_1164) or (ECUMN_3478 and ECUMN_3479 and ECUMN_3480 and ECUMN_3481) or (ECUMN_3041 and ECUMN_3042 and ECUMN_2800 and ECUMN_3044 and ECUMN_3045 and ECUMN_3046)