Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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  5. ECs0979
Gene
ECs0979

ECs0979

  • Model: iECs_1301
Associated reactions
  BiGG ID Name Gene reaction rule
DMSOR1 Dimethyl sulfoxide reductase (Menaquinol 8) ECs0979 and ECs0980 and ECs0981
DMSOR2 Dimethyl sulfoxide reductase (Demethylmenaquinol 8) ECs0979 and ECs0980 and ECs0981
TMAOR1 Trimethylamine N-oxide reductase (menaquinol 8) ECs0979 and ECs0980 and ECs0981
TMAOR2 Trimethylamine N-oxide reductase (demethylmenaquinol 8) ECs0979 and ECs0980 and ECs0981