Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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Gene
ECs3227

ECs3227

  • Model: iECs_1301
Associated reactions
  BiGG ID Name Gene reaction rule
DDCAtexi Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
HDCAtexi Hexadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
HDCEAtexi Hexadecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
OCDCAtexi Octadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
OCDCEAtexi Octadecenoate (n-C18:1) transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
TTDCAtexi Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
TTDCEAtexi Tetradecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) ECs3227
HDCAt2pp Hexadecanoate transport via proton symport ECs3227