Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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  5. ECs3840
Gene
ECs3840

ECs3840

  • Model: iECs_1301
Associated reactions
  BiGG ID Name Gene reaction rule
ADNt2pp adenosine transport in via proton symport (periplasm) ECs3840 or ECs3272
CYTDt2pp cytidine transport in via proton symport (periplasm) ECs3272 or ECs3840
DADNt2pp deoxyadenosine transport in via proton symport (periplasm) ECs3840 or ECs3272
DCYTt2pp deoxycytidine transport in via proton symport (periplasm) ECs3272 or ECs3840
DGSNt2pp deoxyguanosine transport in via proton symport (periplasm) ECs3840
DINSt2pp deoxyinosine transport in via proton symport (periplasm) ECs3840
DURIt2pp deoxyuridine transport in via proton symport (periplasm) ECs3840 or ECs3272
GSNt2pp guanosine transport in via proton symport (periplasm) ECs3840
INSt2pp inosine transport in via proton symport (periplasm) ECs3840
THMDt2pp thymidine transport in via proton symport (periplasm) ECs3272 or ECs3840
URIt2pp uridine transport in via proton symport (periplasm) ECs3272 or ECs3840