Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
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    • Ex: kegg.compound:C00062, kegg:R01086
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    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
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    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

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Gene
ECs4842

ECs4842

  • Model: iECs_1301
Associated reactions
  BiGG ID Name Gene reaction rule
MOBDabcpp molybdate transport via ABC system (periplasm) (ECs0791 and ECs0792 and ECs0793) or (ECs3293 and ECs3295 and ECs3294 and ECs4842) or (ECs3293 and ECs3296 and ECs3295 and ECs3294)
SULabcpp sulfate transport via ABC system (periplasm) (ECs3293 and ECs3296 and ECs3295 and ECs3294) or (ECs0791 and ECs0792 and ECs0793) or (ECs3293 and ECs3295 and ECs3294 and ECs4842)
__iECx55__TSULabcpp thiosulfate transport via ABC system (periplasm) (ECs3293 and ECs3296 and ECs3295 and ECs3294) or (ECs3293 and ECs3295 and ECs3294 and ECs4842)